Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28614.t1 | ABD32840.1 | 95.8 | 355 | 10 | 1 | 1 | 350 | 1 | 355 | 1.40E-203 | 719.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28614.t1 | Q93VC9 | 72.1 | 341 | 89 | 1 | 5 | 345 | 21 | 355 | 2.6e-153 | 543.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28614.t1 | B7FJ05 | 95.8 | 355 | 10 | 1 | 1 | 350 | 3 | 357 | 1.0e-203 | 719.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene050819 | MS.gene28614 | PPI |
MS.gene28614 | MS.gene22772 | PPI |
MS.gene28614 | MS.gene072616 | PPI |
MS.gene28614 | MS.gene072617 | PPI |
MS.gene28614 | MS.gene071430 | PPI |
MS.gene072618 | MS.gene28614 | PPI |
MS.gene28614 | MS.gene071429 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28614.t1 | MTR_7g111060 | 95.775 | 355 | 10 | 1 | 1 | 350 | 3 | 357 | 0.0 | 712 |
MS.gene28614.t1 | MTR_7g111060 | 87.798 | 336 | 40 | 1 | 350 | 684 | 24 | 359 | 0.0 | 624 |
MS.gene28614.t1 | MTR_7g111050 | 96.997 | 333 | 10 | 0 | 352 | 684 | 24 | 356 | 0.0 | 682 |
MS.gene28614.t1 | MTR_7g111050 | 86.158 | 354 | 45 | 1 | 1 | 350 | 1 | 354 | 0.0 | 643 |
MS.gene28614.t1 | MTR_7g111050 | 96.403 | 278 | 10 | 0 | 352 | 629 | 19 | 296 | 0.0 | 569 |
MS.gene28614.t1 | MTR_7g111050 | 84.385 | 301 | 38 | 2 | 1 | 297 | 1 | 296 | 0.0 | 533 |
MS.gene28614.t1 | MTR_4g125300 | 31.429 | 315 | 178 | 11 | 15 | 323 | 58 | 340 | 8.40e-33 | 130 |
MS.gene28614.t1 | MTR_4g125300 | 31.148 | 305 | 174 | 12 | 358 | 655 | 65 | 340 | 2.32e-29 | 120 |
MS.gene28614.t1 | MTR_4g094918 | 29.562 | 274 | 162 | 12 | 59 | 323 | 82 | 333 | 2.53e-25 | 108 |
MS.gene28614.t1 | MTR_4g094918 | 29.682 | 283 | 166 | 13 | 391 | 664 | 82 | 340 | 1.74e-22 | 100 |
MS.gene28614.t1 | MTR_7g079230 | 30.081 | 246 | 141 | 6 | 99 | 338 | 120 | 340 | 1.85e-24 | 105 |
MS.gene28614.t1 | MTR_7g079230 | 29.675 | 246 | 142 | 6 | 431 | 670 | 120 | 340 | 2.78e-22 | 99.4 |
MS.gene28614.t1 | MTR_7g078600 | 31.140 | 228 | 128 | 6 | 102 | 323 | 125 | 329 | 7.86e-24 | 103 |
MS.gene28614.t1 | MTR_7g078600 | 30.612 | 245 | 139 | 7 | 431 | 669 | 122 | 341 | 2.23e-22 | 99.4 |
MS.gene28614.t1 | MTR_3g075390 | 25.796 | 314 | 203 | 11 | 18 | 323 | 45 | 336 | 7.98e-24 | 104 |
MS.gene28614.t1 | MTR_3g075390 | 29.918 | 244 | 139 | 10 | 434 | 668 | 130 | 350 | 7.64e-21 | 95.1 |
MS.gene28614.t1 | MTR_1g023210 | 26.984 | 315 | 181 | 12 | 363 | 660 | 75 | 357 | 2.01e-23 | 103 |
MS.gene28614.t1 | MTR_1g023210 | 28.344 | 314 | 178 | 13 | 31 | 328 | 75 | 357 | 6.53e-23 | 101 |
MS.gene28614.t1 | MTR_2g015850 | 28.244 | 262 | 147 | 7 | 407 | 661 | 130 | 357 | 2.06e-23 | 102 |
MS.gene28614.t1 | MTR_2g015850 | 28.148 | 270 | 165 | 8 | 59 | 323 | 110 | 355 | 2.31e-23 | 102 |
MS.gene28614.t1 | MTR_4g071060 | 29.371 | 286 | 159 | 12 | 59 | 328 | 95 | 353 | 2.04e-22 | 100 |
MS.gene28614.t1 | MTR_4g071060 | 29.514 | 288 | 156 | 14 | 391 | 660 | 95 | 353 | 7.63e-22 | 98.2 |
MS.gene28614.t1 | MTR_4g107930 | 28.400 | 250 | 145 | 9 | 82 | 323 | 113 | 336 | 4.47e-22 | 98.6 |
MS.gene28614.t1 | MTR_4g107930 | 25.170 | 294 | 175 | 9 | 389 | 665 | 79 | 344 | 9.96e-21 | 94.7 |
MS.gene28614.t1 | MTR_4g104370 | 27.354 | 223 | 136 | 7 | 106 | 323 | 134 | 335 | 6.00e-22 | 98.6 |
MS.gene28614.t1 | MTR_4g104370 | 27.234 | 235 | 143 | 8 | 438 | 667 | 134 | 345 | 5.78e-19 | 89.7 |
MS.gene28614.t1 | MTR_2g083930 | 28.253 | 269 | 160 | 7 | 61 | 323 | 94 | 335 | 6.45e-22 | 98.2 |
MS.gene28614.t1 | MTR_2g083930 | 28.731 | 268 | 158 | 7 | 394 | 655 | 95 | 335 | 4.59e-21 | 95.5 |
MS.gene28614.t1 | MTR_3g102220 | 28.315 | 279 | 159 | 12 | 59 | 323 | 102 | 353 | 7.37e-22 | 99.8 |
MS.gene28614.t1 | MTR_3g102220 | 28.975 | 283 | 152 | 14 | 391 | 655 | 102 | 353 | 4.21e-17 | 85.1 |
MS.gene28614.t1 | MTR_1g107550 | 28.125 | 288 | 172 | 12 | 59 | 336 | 98 | 360 | 7.45e-22 | 99.8 |
MS.gene28614.t1 | MTR_1g107550 | 26.923 | 286 | 174 | 12 | 391 | 667 | 98 | 357 | 5.52e-17 | 84.7 |
MS.gene28614.t1 | MTR_4g047610 | 28.112 | 249 | 147 | 8 | 82 | 323 | 111 | 334 | 9.58e-22 | 97.8 |
MS.gene28614.t1 | MTR_4g047610 | 26.280 | 293 | 173 | 10 | 389 | 665 | 77 | 342 | 3.33e-21 | 95.9 |
MS.gene28614.t1 | MTR_5g022560 | 27.711 | 249 | 148 | 8 | 82 | 323 | 112 | 335 | 1.37e-21 | 97.1 |
MS.gene28614.t1 | MTR_5g022560 | 28.750 | 240 | 131 | 8 | 438 | 665 | 132 | 343 | 4.98e-20 | 92.4 |
MS.gene28614.t1 | MTR_4g079470 | 29.333 | 225 | 131 | 7 | 106 | 323 | 133 | 336 | 1.48e-21 | 97.1 |
MS.gene28614.t1 | MTR_4g079470 | 26.531 | 294 | 174 | 11 | 387 | 665 | 78 | 344 | 5.35e-21 | 95.5 |
MS.gene28614.t1 | MTR_2g090890 | 26.786 | 280 | 169 | 10 | 56 | 328 | 83 | 333 | 1.89e-21 | 96.7 |
MS.gene28614.t1 | MTR_2g090890 | 28.070 | 285 | 165 | 13 | 388 | 664 | 83 | 335 | 5.48e-20 | 92.4 |
MS.gene28614.t1 | MTR_4g079770 | 29.333 | 225 | 131 | 7 | 106 | 323 | 133 | 336 | 2.43e-21 | 96.3 |
MS.gene28614.t1 | MTR_4g079770 | 26.531 | 294 | 174 | 11 | 387 | 665 | 78 | 344 | 1.01e-20 | 94.7 |
MS.gene28614.t1 | MTR_2g015920 | 30.932 | 236 | 133 | 8 | 89 | 320 | 134 | 343 | 8.08e-21 | 95.5 |
MS.gene28614.t1 | MTR_2g015920 | 30.802 | 237 | 132 | 11 | 421 | 652 | 134 | 343 | 4.25e-18 | 87.0 |
MS.gene28614.t1 | MTR_4g079440 | 28.205 | 273 | 161 | 9 | 62 | 323 | 88 | 336 | 9.60e-21 | 94.7 |
MS.gene28614.t1 | MTR_4g079440 | 27.817 | 284 | 162 | 12 | 391 | 664 | 93 | 343 | 8.39e-19 | 89.0 |
MS.gene28614.t1 | MTR_4g079800 | 28.194 | 227 | 131 | 7 | 106 | 323 | 133 | 336 | 1.75e-20 | 94.0 |
MS.gene28614.t1 | MTR_4g079800 | 24.830 | 294 | 179 | 11 | 387 | 665 | 78 | 344 | 3.59e-19 | 90.1 |
MS.gene28614.t1 | MTR_4g080730 | 27.473 | 273 | 165 | 10 | 60 | 326 | 89 | 334 | 3.74e-20 | 92.8 |
MS.gene28614.t1 | MTR_4g080730 | 29.302 | 215 | 124 | 8 | 447 | 655 | 139 | 331 | 2.42e-17 | 84.3 |
MS.gene28614.t1 | MTR_4g080360 | 29.694 | 229 | 132 | 8 | 102 | 323 | 127 | 333 | 4.50e-20 | 92.8 |
MS.gene28614.t1 | MTR_4g080360 | 29.614 | 233 | 127 | 9 | 434 | 655 | 127 | 333 | 1.11e-17 | 85.5 |
MS.gene28614.t1 | MTR_4g080700 | 27.839 | 273 | 164 | 10 | 60 | 326 | 89 | 334 | 5.63e-20 | 92.4 |
MS.gene28614.t1 | MTR_4g080700 | 30.732 | 205 | 118 | 7 | 447 | 649 | 139 | 321 | 1.34e-17 | 85.1 |
MS.gene28614.t1 | MTR_3g116080 | 26.380 | 326 | 203 | 15 | 7 | 323 | 42 | 339 | 1.38e-19 | 91.3 |
MS.gene28614.t1 | MTR_1g018840 | 28.470 | 281 | 156 | 13 | 59 | 323 | 102 | 353 | 7.25e-19 | 90.5 |
MS.gene28614.t1 | MTR_1g018840 | 26.950 | 282 | 159 | 13 | 391 | 655 | 102 | 353 | 7.83e-15 | 78.2 |
MS.gene28614.t1 | MTR_1g018840 | 28.470 | 281 | 156 | 13 | 59 | 323 | 102 | 353 | 9.94e-19 | 90.1 |
MS.gene28614.t1 | MTR_1g018840 | 26.950 | 282 | 159 | 13 | 391 | 655 | 102 | 353 | 1.45e-14 | 77.0 |
MS.gene28614.t1 | MTR_2g067900 | 29.200 | 250 | 142 | 9 | 83 | 323 | 94 | 317 | 1.30e-17 | 85.1 |
MS.gene28614.t1 | MTR_2g067900 | 27.863 | 262 | 154 | 8 | 412 | 664 | 90 | 325 | 6.68e-17 | 82.8 |
MS.gene28614.t1 | MTR_2g075830 | 29.075 | 227 | 129 | 7 | 106 | 323 | 129 | 332 | 5.16e-16 | 80.5 |
MS.gene28614.t1 | MTR_2g075830 | 29.310 | 232 | 136 | 8 | 431 | 655 | 122 | 332 | 6.87e-15 | 77.0 |
MS.gene28614.t1 | MTR_2g067560 | 25.000 | 280 | 155 | 12 | 59 | 316 | 64 | 310 | 5.73e-16 | 82.4 |
MS.gene28614.t1 | MTR_2g067560 | 24.696 | 247 | 146 | 9 | 410 | 648 | 96 | 310 | 1.46e-14 | 78.2 |
MS.gene28614.t1 | MTR_2g064475 | 28.319 | 226 | 120 | 11 | 102 | 316 | 137 | 331 | 1.06e-15 | 79.7 |
MS.gene28614.t1 | MTR_2g064475 | 27.935 | 247 | 133 | 13 | 434 | 666 | 137 | 352 | 1.83e-13 | 72.8 |
MS.gene28614.t1 | MTR_2g015930 | 29.412 | 221 | 125 | 8 | 106 | 320 | 148 | 343 | 1.93e-15 | 79.0 |
MS.gene28614.t1 | MTR_2g015930 | 27.397 | 219 | 132 | 7 | 438 | 652 | 148 | 343 | 5.80e-14 | 74.3 |
MS.gene28614.t1 | MTR_1g094135 | 27.778 | 252 | 140 | 10 | 96 | 331 | 141 | 366 | 5.07e-15 | 77.8 |
MS.gene28614.t1 | MTR_1g094135 | 26.984 | 252 | 142 | 10 | 428 | 663 | 141 | 366 | 3.71e-13 | 72.0 |
MS.gene28614.t1 | MTR_2g015840 | 40.909 | 88 | 50 | 2 | 235 | 322 | 173 | 258 | 5.55e-14 | 73.2 |
MS.gene28614.t1 | MTR_2g015840 | 38.835 | 103 | 55 | 4 | 567 | 665 | 173 | 271 | 8.92e-14 | 72.8 |
MS.gene28614.t1 | MTR_2g016180 | 26.384 | 307 | 186 | 12 | 352 | 651 | 66 | 339 | 6.74e-14 | 75.1 |
MS.gene28614.t1 | MTR_7g079130 | 41.463 | 82 | 42 | 3 | 247 | 323 | 9 | 89 | 2.99e-13 | 66.6 |
MS.gene28614.t1 | MTR_7g079130 | 42.683 | 82 | 41 | 3 | 579 | 655 | 9 | 89 | 6.77e-13 | 65.5 |
MS.gene28614.t1 | MTR_7g078580 | 36.957 | 92 | 49 | 3 | 238 | 323 | 5 | 93 | 1.14e-12 | 65.9 |
MS.gene28614.t1 | MTR_7g078580 | 38.043 | 92 | 48 | 3 | 570 | 655 | 5 | 93 | 1.33e-12 | 65.5 |
MS.gene28614.t1 | MTR_2g016270 | 24.375 | 320 | 192 | 11 | 356 | 651 | 31 | 324 | 3.51e-12 | 69.7 |
MS.gene28614.t1 | MTR_8g086470 | 26.639 | 244 | 135 | 9 | 428 | 659 | 141 | 352 | 3.16e-11 | 65.9 |
MS.gene28614.t1 | MTR_8g086470 | 27.273 | 231 | 130 | 10 | 96 | 320 | 141 | 339 | 5.54e-11 | 65.1 |
MS.gene28614.t1 | MTR_4g065077 | 26.639 | 244 | 135 | 9 | 428 | 659 | 141 | 352 | 3.84e-11 | 65.9 |
MS.gene28614.t1 | MTR_4g065077 | 27.273 | 231 | 130 | 10 | 96 | 320 | 141 | 339 | 6.34e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28614.t1 | AT1G02305 | 72.727 | 341 | 90 | 1 | 8 | 345 | 15 | 355 | 0.0 | 535 |
MS.gene28614.t1 | AT1G02305 | 75.312 | 320 | 79 | 0 | 358 | 677 | 36 | 355 | 0.0 | 525 |
MS.gene28614.t1 | AT4G01610 | 75.633 | 316 | 77 | 0 | 24 | 339 | 31 | 346 | 0.0 | 523 |
MS.gene28614.t1 | AT4G01610 | 72.897 | 321 | 85 | 1 | 351 | 671 | 28 | 346 | 1.27e-176 | 508 |
MS.gene28614.t1 | AT4G01610 | 75.000 | 316 | 79 | 0 | 24 | 339 | 31 | 346 | 2.04e-180 | 517 |
MS.gene28614.t1 | AT4G01610 | 72.274 | 321 | 87 | 1 | 351 | 671 | 28 | 346 | 2.71e-174 | 501 |
MS.gene28614.t1 | AT1G02300 | 68.529 | 340 | 87 | 1 | 358 | 677 | 33 | 372 | 4.68e-171 | 494 |
MS.gene28614.t1 | AT1G02300 | 64.543 | 361 | 105 | 2 | 8 | 345 | 12 | 372 | 1.13e-169 | 491 |
MS.gene28614.t1 | AT3G45310 | 29.503 | 322 | 185 | 12 | 12 | 323 | 59 | 348 | 2.87e-28 | 117 |
MS.gene28614.t1 | AT3G45310 | 28.896 | 308 | 177 | 12 | 358 | 655 | 73 | 348 | 1.12e-26 | 112 |
MS.gene28614.t1 | AT5G60360 | 29.781 | 319 | 188 | 12 | 12 | 323 | 59 | 348 | 5.55e-28 | 116 |
MS.gene28614.t1 | AT5G60360 | 29.934 | 304 | 179 | 11 | 358 | 655 | 73 | 348 | 1.47e-26 | 112 |
MS.gene28614.t1 | AT3G19400 | 29.321 | 324 | 189 | 13 | 18 | 333 | 54 | 345 | 9.42e-28 | 115 |
MS.gene28614.t1 | AT3G19400 | 26.582 | 316 | 181 | 12 | 377 | 673 | 79 | 362 | 8.31e-23 | 101 |
MS.gene28614.t1 | AT5G60360 | 29.560 | 318 | 188 | 12 | 12 | 322 | 59 | 347 | 3.66e-27 | 114 |
MS.gene28614.t1 | AT5G60360 | 29.703 | 303 | 179 | 11 | 358 | 654 | 73 | 347 | 8.40e-26 | 110 |
MS.gene28614.t1 | AT3G45310 | 29.375 | 320 | 184 | 12 | 12 | 321 | 59 | 346 | 3.80e-27 | 114 |
MS.gene28614.t1 | AT3G45310 | 28.758 | 306 | 176 | 12 | 358 | 653 | 73 | 346 | 1.45e-25 | 109 |
MS.gene28614.t1 | AT5G60360 | 29.338 | 317 | 188 | 12 | 12 | 321 | 59 | 346 | 1.12e-26 | 112 |
MS.gene28614.t1 | AT5G60360 | 29.470 | 302 | 179 | 11 | 358 | 653 | 73 | 346 | 3.06e-25 | 108 |
MS.gene28614.t1 | AT3G43960 | 26.959 | 319 | 206 | 11 | 5 | 320 | 37 | 331 | 1.01e-25 | 110 |
MS.gene28614.t1 | AT3G43960 | 26.756 | 299 | 193 | 10 | 358 | 652 | 55 | 331 | 2.75e-23 | 102 |
MS.gene28614.t1 | AT4G36880 | 28.276 | 290 | 177 | 10 | 59 | 339 | 102 | 369 | 1.19e-24 | 107 |
MS.gene28614.t1 | AT4G36880 | 28.269 | 283 | 170 | 11 | 391 | 664 | 102 | 360 | 1.91e-20 | 94.4 |
MS.gene28614.t1 | AT3G19390 | 27.476 | 313 | 192 | 12 | 18 | 323 | 53 | 337 | 1.33e-23 | 105 |
MS.gene28614.t1 | AT3G19390 | 26.712 | 292 | 181 | 12 | 380 | 665 | 81 | 345 | 2.50e-19 | 92.0 |
MS.gene28614.t1 | AT1G29080 | 28.344 | 314 | 186 | 11 | 12 | 316 | 43 | 326 | 4.02e-23 | 101 |
MS.gene28614.t1 | AT1G29080 | 30.986 | 213 | 123 | 5 | 438 | 648 | 136 | 326 | 9.46e-21 | 94.7 |
MS.gene28614.t1 | AT4G23520 | 30.657 | 274 | 154 | 12 | 59 | 323 | 95 | 341 | 6.52e-23 | 101 |
MS.gene28614.t1 | AT4G23520 | 28.723 | 282 | 165 | 12 | 391 | 664 | 95 | 348 | 1.08e-18 | 89.0 |
MS.gene28614.t1 | AT3G48340 | 27.698 | 278 | 162 | 11 | 59 | 323 | 84 | 335 | 2.02e-22 | 100 |
MS.gene28614.t1 | AT3G48340 | 27.526 | 287 | 167 | 12 | 391 | 664 | 84 | 342 | 2.42e-19 | 90.9 |
MS.gene28614.t1 | AT5G43060 | 29.197 | 274 | 156 | 13 | 59 | 323 | 101 | 345 | 3.44e-21 | 97.8 |
MS.gene28614.t1 | AT5G43060 | 28.472 | 288 | 162 | 16 | 391 | 667 | 101 | 355 | 3.43e-17 | 85.5 |
MS.gene28614.t1 | AT3G49340 | 27.305 | 282 | 175 | 9 | 40 | 316 | 65 | 321 | 1.06e-20 | 94.4 |
MS.gene28614.t1 | AT3G49340 | 31.308 | 214 | 119 | 7 | 438 | 648 | 133 | 321 | 1.30e-20 | 94.4 |
MS.gene28614.t1 | AT1G47128 | 28.058 | 278 | 155 | 14 | 59 | 323 | 99 | 344 | 1.10e-20 | 96.3 |
MS.gene28614.t1 | AT1G47128 | 26.259 | 278 | 160 | 14 | 391 | 655 | 99 | 344 | 2.48e-16 | 82.8 |
MS.gene28614.t1 | AT1G09850 | 27.508 | 309 | 186 | 13 | 25 | 323 | 45 | 325 | 1.42e-20 | 95.5 |
MS.gene28614.t1 | AT1G09850 | 28.374 | 289 | 171 | 12 | 375 | 655 | 65 | 325 | 1.45e-17 | 86.3 |
MS.gene28614.t1 | AT4G39090 | 28.472 | 288 | 160 | 12 | 59 | 328 | 98 | 357 | 1.84e-20 | 94.4 |
MS.gene28614.t1 | AT4G39090 | 28.374 | 289 | 159 | 13 | 391 | 660 | 98 | 357 | 6.37e-20 | 92.8 |
MS.gene28614.t1 | AT2G27420 | 26.149 | 348 | 205 | 12 | 1 | 316 | 1 | 328 | 1.88e-20 | 94.0 |
MS.gene28614.t1 | AT2G27420 | 29.237 | 236 | 135 | 9 | 438 | 664 | 134 | 346 | 2.07e-17 | 84.7 |
MS.gene28614.t1 | AT4G35350 | 29.304 | 273 | 157 | 13 | 60 | 323 | 99 | 344 | 2.48e-20 | 93.6 |
MS.gene28614.t1 | AT4G35350 | 25.993 | 277 | 161 | 10 | 391 | 660 | 110 | 349 | 3.37e-17 | 84.3 |
MS.gene28614.t1 | AT2G21430 | 28.669 | 293 | 165 | 12 | 59 | 334 | 95 | 360 | 2.77e-20 | 93.6 |
MS.gene28614.t1 | AT2G21430 | 27.003 | 337 | 191 | 18 | 349 | 666 | 60 | 360 | 6.18e-19 | 89.7 |
MS.gene28614.t1 | AT5G50260 | 26.087 | 276 | 168 | 10 | 59 | 323 | 84 | 334 | 5.24e-20 | 92.8 |
MS.gene28614.t1 | AT5G50260 | 27.984 | 243 | 142 | 10 | 428 | 664 | 126 | 341 | 1.34e-17 | 85.5 |
MS.gene28614.t1 | AT1G20850 | 26.300 | 327 | 202 | 15 | 8 | 323 | 47 | 345 | 8.65e-20 | 92.0 |
MS.gene28614.t1 | AT1G20850 | 26.752 | 314 | 190 | 16 | 354 | 655 | 60 | 345 | 4.17e-17 | 84.0 |
MS.gene28614.t1 | AT2G34080 | 30.986 | 213 | 122 | 6 | 106 | 316 | 136 | 325 | 1.35e-19 | 91.3 |
MS.gene28614.t1 | AT2G34080 | 31.841 | 201 | 112 | 6 | 450 | 648 | 148 | 325 | 2.73e-18 | 87.4 |
MS.gene28614.t1 | AT4G16190 | 28.819 | 288 | 161 | 11 | 59 | 328 | 102 | 363 | 1.63e-19 | 91.7 |
MS.gene28614.t1 | AT4G16190 | 28.179 | 291 | 159 | 14 | 391 | 660 | 102 | 363 | 3.22e-17 | 84.7 |
MS.gene28614.t1 | AT3G48350 | 24.749 | 299 | 184 | 11 | 59 | 340 | 84 | 358 | 8.74e-19 | 89.4 |
MS.gene28614.t1 | AT3G48350 | 27.273 | 264 | 160 | 10 | 427 | 682 | 125 | 364 | 2.64e-17 | 84.7 |
MS.gene28614.t1 | AT1G06260 | 27.574 | 272 | 163 | 10 | 59 | 323 | 90 | 334 | 1.19e-18 | 88.6 |
MS.gene28614.t1 | AT1G06260 | 27.758 | 281 | 167 | 11 | 391 | 664 | 90 | 341 | 1.09e-17 | 85.5 |
MS.gene28614.t1 | AT1G29090 | 25.667 | 300 | 189 | 10 | 26 | 316 | 61 | 335 | 8.68e-18 | 85.9 |
MS.gene28614.t1 | AT1G29090 | 30.846 | 201 | 115 | 5 | 450 | 648 | 157 | 335 | 1.12e-16 | 82.8 |
MS.gene28614.t1 | AT4G11310 | 26.619 | 278 | 160 | 11 | 60 | 323 | 97 | 344 | 2.69e-17 | 84.7 |
MS.gene28614.t1 | AT4G11310 | 30.000 | 250 | 127 | 12 | 428 | 664 | 137 | 351 | 2.54e-16 | 81.6 |
MS.gene28614.t1 | AT5G45890 | 25.949 | 316 | 189 | 13 | 25 | 323 | 50 | 337 | 3.03e-17 | 84.3 |
MS.gene28614.t1 | AT5G45890 | 29.960 | 247 | 133 | 12 | 428 | 665 | 130 | 345 | 5.75e-15 | 77.4 |
MS.gene28614.t1 | AT4G11320 | 25.159 | 314 | 169 | 13 | 25 | 316 | 71 | 340 | 1.01e-16 | 83.2 |
MS.gene28614.t1 | AT4G11320 | 28.800 | 250 | 130 | 12 | 428 | 664 | 144 | 358 | 1.30e-14 | 76.6 |
MS.gene28614.t1 | AT4G11320 | 25.159 | 314 | 169 | 13 | 25 | 316 | 71 | 340 | 1.01e-16 | 83.2 |
MS.gene28614.t1 | AT4G11320 | 28.800 | 250 | 130 | 12 | 428 | 664 | 144 | 358 | 1.30e-14 | 76.6 |
MS.gene28614.t1 | AT3G54940 | 27.491 | 291 | 163 | 13 | 391 | 661 | 98 | 360 | 5.22e-16 | 80.9 |
MS.gene28614.t1 | AT3G54940 | 28.000 | 250 | 138 | 11 | 96 | 329 | 137 | 360 | 5.46e-16 | 80.9 |
MS.gene28614.t1 | AT3G19400 | 29.885 | 174 | 113 | 5 | 18 | 189 | 54 | 220 | 1.60e-13 | 72.0 |
MS.gene28614.t1 | AT1G29110 | 29.730 | 185 | 103 | 8 | 145 | 323 | 162 | 325 | 1.97e-13 | 72.4 |
MS.gene28614.t1 | AT1G29110 | 28.877 | 187 | 103 | 8 | 485 | 664 | 169 | 332 | 2.87e-12 | 68.9 |
Find 184 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTTGTGGGGCTGGCTGTGC+TGG | 0.099425 | 7.3:+4629424 | MS.gene28614:CDS |
CAAATCAGTGGAATACAAAT+TGG | 0.187924 | 7.3:+4623768 | MS.gene28614:CDS |
CAAATCAGTGGAATACAAAT+TGG | 0.198746 | 7.3:+4631743 | MS.gene28614:CDS |
CTCTGTGGGGCTGGCTGTGA+TGG | 0.214575 | 7.3:+4621605 | MS.gene28614:CDS |
TTTGTGGGGCTGGCTGTGCT+GGG | 0.266325 | 7.3:+4629425 | MS.gene28614:CDS |
CATCCAATTTGATCAAAGTA+TGG | 0.270544 | 7.3:-4621777 | None:intergenic |
CAACCAATTTGATCAAAGTA+TGG | 0.270755 | 7.3:-4629591 | None:intergenic |
TGTGGGGCTGGCTGTGCTGG+GGG | 0.275457 | 7.3:+4629427 | MS.gene28614:CDS |
TGTGGGGCTGGCTGTGATGG+GGG | 0.278433 | 7.3:+4621608 | MS.gene28614:CDS |
TCTGTGGGGCTGGCTGTGAT+GGG | 0.284375 | 7.3:+4621606 | MS.gene28614:CDS |
TTGTGGGGCTGGCTGTGCTG+GGG | 0.299442 | 7.3:+4629426 | MS.gene28614:CDS |
CATGCTGTGGCCTTCTTTGT+GGG | 0.299454 | 7.3:+4629410 | MS.gene28614:CDS |
GCTTTGACCTCTTCCAAATC+TGG | 0.305312 | 7.3:-4621866 | None:intergenic |
TGCACTACTCAGTTCACTTC+GGG | 0.309861 | 7.3:-4628538 | None:intergenic |
CTGTGGGGCTGGCTGTGATG+GGG | 0.315253 | 7.3:+4621607 | MS.gene28614:CDS |
GCAGCCTCCCATCCTGCCTC+TGG | 0.319667 | 7.3:-4618908 | None:intergenic |
GCAGCTTCCCATCCTGCCTC+TGG | 0.319667 | 7.3:-4627210 | None:intergenic |
AAACTTCTGCCATGATATCT+TGG | 0.322656 | 7.3:-4621926 | None:intergenic |
AAACTTCTGCCATGATATCT+TGG | 0.322656 | 7.3:-4629740 | None:intergenic |
GACCCATACTTTGATCAAAT+TGG | 0.329031 | 7.3:+4621774 | MS.gene28614:CDS |
GCTTAATTCTCATATTCTTC+AGG | 0.333399 | 7.3:+4618747 | MS.gene28614:CDS |
TGTGGTTCTTGTTGGGCATT+TGG | 0.335761 | 7.3:+4628904 | MS.gene28614:CDS |
GTGATGAAGGGGAGGACTAT+TGG | 0.337515 | 7.3:+4623636 | MS.gene28614:CDS |
GTGATGAAGGGGAGGACTAT+TGG | 0.337515 | 7.3:+4631604 | MS.gene28614:CDS |
TGCGGTTCTTGTTGGGCATT+TGG | 0.339449 | 7.3:+4621085 | MS.gene28614:CDS |
GGACAATTTAAGCGGCTTCT+TGG | 0.344878 | 7.3:+4628501 | MS.gene28614:CDS |
GGACAATTTAAGCGCCTTCT+TGG | 0.346589 | 7.3:+4620691 | MS.gene28614:CDS |
GTGGGGCTGGCTGTGATGGG+GGG | 0.350671 | 7.3:+4621609 | MS.gene28614:CDS |
TGTGGCCTTCTTTGTGGGGC+TGG | 0.356403 | 7.3:+4629415 | MS.gene28614:CDS |
ACTATAGTGTCAAAGCATAT+AGG | 0.358732 | 7.3:+4621889 | MS.gene28614:CDS |
GCATGCTGTGGCCTTCTTTG+TGG | 0.364321 | 7.3:+4629409 | MS.gene28614:CDS |
GACCCATACTTTGATCAAAT+TGG | 0.371892 | 7.3:+4629588 | MS.gene28614:CDS |
AACTTCTGCCATGATATCTT+GGG | 0.374044 | 7.3:-4621925 | None:intergenic |
AACTTCTGCCATGATATCTT+GGG | 0.374044 | 7.3:-4629739 | None:intergenic |
AGGGTCACTGTGGTTCTTGT+TGG | 0.376443 | 7.3:+4628896 | MS.gene28614:intron |
ATCACCATTGGGAGAATTCT+AGG | 0.377126 | 7.3:+4628633 | MS.gene28614:CDS |
GGGTCACTGTGGTTCTTGTT+GGG | 0.383554 | 7.3:+4628897 | MS.gene28614:intron |
TGTGTTAGAAAGTGTGTAAA+TGG | 0.383789 | 7.3:+4621840 | MS.gene28614:CDS |
GCTTAATTCTCATATCCTTC+AGG | 0.386046 | 7.3:+4627059 | MS.gene28614:CDS |
AGGGTCACTGCGGTTCTTGT+TGG | 0.386573 | 7.3:+4621077 | MS.gene28614:intron |
ACTGACATGGATGCTGATGC+TGG | 0.387828 | 7.3:+4623991 | MS.gene28614:CDS |
AGTGTGTGTAACCGTAAAAT+TGG | 0.388978 | 7.3:-4618948 | None:intergenic |
TGGTCTCAGTGTAGCACTAT+TGG | 0.391866 | 7.3:+4620811 | MS.gene28614:CDS |
GTCCTTGCATCAAAGTCCTT+TGG | 0.391931 | 7.3:-4628594 | None:intergenic |
TGATGAAGGGGAGGACTATT+GGG | 0.393148 | 7.3:+4623637 | MS.gene28614:CDS |
TGATGAAGGGGAGGACTATT+GGG | 0.393148 | 7.3:+4631605 | MS.gene28614:CDS |
GTGTAAATGGGAACCAGCTT+TGG | 0.394454 | 7.3:+4629667 | MS.gene28614:CDS |
GGGTCACTGCGGTTCTTGTT+GGG | 0.395456 | 7.3:+4621078 | MS.gene28614:intron |
GTCCTTGCATCAAATTCCTT+TGG | 0.395932 | 7.3:-4620784 | None:intergenic |
AAATCAGTGGAATACAAATT+GGG | 0.397422 | 7.3:+4631744 | MS.gene28614:CDS |
GTGGGGCTGGCTGTGCTGGG+GGG | 0.401183 | 7.3:+4629428 | MS.gene28614:CDS |
AACCGTAAAATTGAAGAAAC+GGG | 0.407139 | 7.3:-4627241 | None:intergenic |
CTATAGTGTCAGAGCATATA+CGG | 0.409518 | 7.3:+4629704 | MS.gene28614:CDS |
AAATCAGTGGAATACAAATT+GGG | 0.409584 | 7.3:+4623769 | MS.gene28614:CDS |
CACAGCCAGCCCCACAAAGA+AGG | 0.411963 | 7.3:-4629420 | None:intergenic |
ACAGTGAATGCAACTTCAAC+TGG | 0.421691 | 7.3:-4629774 | None:intergenic |
CATGCTGTGGATTTCTCTGT+GGG | 0.422387 | 7.3:+4621591 | MS.gene28614:CDS |
CTATAGTGTCAAAGCATATA+GGG | 0.426475 | 7.3:+4621890 | MS.gene28614:CDS |
ACAGTGAATGCAACTTCAAC+GGG | 0.426611 | 7.3:-4621960 | None:intergenic |
GTGAACAGGGGCAGAATTGT+TGG | 0.426878 | 7.3:-4618575 | None:intergenic |
AGTTGCATTCACTGTTTATG+AGG | 0.432565 | 7.3:+4629782 | MS.gene28614:CDS |
CAAATTGGTTGTTCTCATCC+TGG | 0.432865 | 7.3:+4629603 | MS.gene28614:CDS |
TGTGGATTTCTCTGTGGGGC+TGG | 0.433679 | 7.3:+4621596 | MS.gene28614:CDS |
CACTTGGGAGTTTGATATGC+TGG | 0.433878 | 7.3:-4621819 | None:intergenic |
GTGTAAATGGAAACCAGATT+TGG | 0.439628 | 7.3:+4621853 | MS.gene28614:CDS |
GGGTGGGGAACAAGTGATGA+AGG | 0.447373 | 7.3:+4623623 | MS.gene28614:CDS |
GGGTGGGGAACAAGTGATGA+AGG | 0.447373 | 7.3:+4631591 | MS.gene28614:CDS |
TGGCAGAAGTTTATAAGAAC+GGG | 0.447542 | 7.3:+4621937 | MS.gene28614:CDS |
TGGCAGAAGTTTATAAGAAC+GGG | 0.447542 | 7.3:+4629751 | MS.gene28614:CDS |
TGTAAATGGGAACCAGCTTT+GGG | 0.453147 | 7.3:+4629668 | MS.gene28614:CDS |
CTGACATGGATGCTGATGCT+GGG | 0.456035 | 7.3:+4623992 | MS.gene28614:CDS |
TAAGTATATCCATGCAGAAA+AGG | 0.458332 | 7.3:-4629455 | None:intergenic |
TAACCGTAAAATTGAAGAAA+CGG | 0.461720 | 7.3:-4627242 | None:intergenic |
TTTCTCCGCTTCTTATCTAT+CGG | 0.464167 | 7.3:+4618610 | MS.gene28614:CDS |
GGTCATGCAGTAAAGCTGAT+TGG | 0.466430 | 7.3:+4631570 | MS.gene28614:CDS |
CACTTTGGAGTTCGGTATGT+TGG | 0.473978 | 7.3:-4629633 | None:intergenic |
TACACACTTTCTAACACACT+TGG | 0.474349 | 7.3:-4621835 | None:intergenic |
CTCTGATCCCCAAGATATCA+TGG | 0.475002 | 7.3:+4629731 | MS.gene28614:CDS |
GTCATGCAGTAAAGCTGATT+GGG | 0.475389 | 7.3:+4631571 | MS.gene28614:CDS |
CAGCTTCCCATCCTGCCTCT+GGG | 0.483711 | 7.3:-4627209 | None:intergenic |
ATTGAAAATGCTGTTACTGC+TGG | 0.484742 | 7.3:+4631904 | MS.gene28614:CDS |
TGATATGCTGGCTCACAACC+AGG | 0.495487 | 7.3:-4621807 | None:intergenic |
GTGGGGAACAAGTGATGAAG+GGG | 0.496359 | 7.3:+4623625 | MS.gene28614:CDS |
GTGGGGAACAAGTGATGAAG+GGG | 0.496359 | 7.3:+4631593 | MS.gene28614:CDS |
GCTTTGAAGTCTCCCAAAGC+TGG | 0.502118 | 7.3:-4629680 | None:intergenic |
CGGTATGTTGGCTCACAACC+AGG | 0.503854 | 7.3:-4629621 | None:intergenic |
GTCTGATCCCCAAGATATCA+TGG | 0.503888 | 7.3:+4621917 | MS.gene28614:CDS |
GTCATGCAGTAAAGCTGATT+GGG | 0.506320 | 7.3:+4623603 | MS.gene28614:CDS |
CAGCCTCCCATCCTGCCTCT+GGG | 0.508548 | 7.3:-4618907 | None:intergenic |
CGAAAACCCAGAGGCAGGAT+GGG | 0.509048 | 7.3:+4627203 | MS.gene28614:CDS |
AAGTATCGCCACGCATAAAG+TGG | 0.510802 | 7.3:-4621635 | None:intergenic |
AAGTATATCCATGCAGAAAA+GGG | 0.512374 | 7.3:-4629454 | None:intergenic |
GGTCGCAATGTATCACCATT+GGG | 0.515024 | 7.3:+4628622 | MS.gene28614:CDS |
AACAGTGAATGCAACTTCAA+CGG | 0.515072 | 7.3:-4621961 | None:intergenic |
CGAAAACCCAGAGGCAGGAT+GGG | 0.515868 | 7.3:+4618901 | MS.gene28614:CDS |
AATGACCTTCTTGCATGCTG+TGG | 0.518649 | 7.3:+4621578 | MS.gene28614:CDS |
GGTCATGCAGTAAAGCTGAT+TGG | 0.519439 | 7.3:+4623602 | MS.gene28614:CDS |
TTCAGCTTCTTGCAAATCAG+TGG | 0.527306 | 7.3:+4623756 | MS.gene28614:intron |
TTCAGCTTCTTGCAAATCAG+TGG | 0.527306 | 7.3:+4631731 | MS.gene28614:intron |
TGGTCGCAATGTATCACCAT+TGG | 0.527867 | 7.3:+4628621 | MS.gene28614:CDS |
CTGTTGAATCATTATCAGAT+CGG | 0.528221 | 7.3:+4628929 | MS.gene28614:CDS |
GCAGTAAAGCTGATTGGGTG+GGG | 0.530066 | 7.3:+4623608 | MS.gene28614:CDS |
GCAGTAAAGCTGATTGGGTG+GGG | 0.530066 | 7.3:+4631576 | MS.gene28614:CDS |
ATGCTGTGGCCTTCTTTGTG+GGG | 0.537485 | 7.3:+4629411 | MS.gene28614:CDS |
CACATCACAGGTTCTGCACT+AGG | 0.542573 | 7.3:+4623578 | MS.gene28614:CDS |
AATTTGATGCAAGGACGGCT+TGG | 0.543969 | 7.3:+4620791 | MS.gene28614:CDS |
ATCCAATTTGATCAAAGTAT+GGG | 0.544463 | 7.3:-4621776 | None:intergenic |
GTGCACTACTCAGTTCACTT+CGG | 0.549157 | 7.3:-4628539 | None:intergenic |
GGAATTTACAAACACATCAC+GGG | 0.550835 | 7.3:+4631534 | MS.gene28614:CDS |
GCATGCTGTGGATTTCTCTG+TGG | 0.553426 | 7.3:+4621590 | MS.gene28614:CDS |
GTGCTTGTTTGACTCCAAGA+AGG | 0.555712 | 7.3:-4620705 | None:intergenic |
AACCAATTTGATCAAAGTAT+GGG | 0.556250 | 7.3:-4629590 | None:intergenic |
AATGACATTCTTGCATGCTG+TGG | 0.558753 | 7.3:+4629397 | MS.gene28614:CDS |
GGTGGGGAACAAGTGATGAA+GGG | 0.560873 | 7.3:+4623624 | MS.gene28614:CDS |
GGTGGGGAACAAGTGATGAA+GGG | 0.560873 | 7.3:+4631592 | MS.gene28614:CDS |
TGCAGTAAAGCTGATTGGGT+GGG | 0.561138 | 7.3:+4623607 | MS.gene28614:CDS |
TGCAGTAAAGCTGATTGGGT+GGG | 0.561138 | 7.3:+4631575 | MS.gene28614:CDS |
ATTAACGAAAACCCAGAGGC+AGG | 0.562042 | 7.3:+4618896 | MS.gene28614:CDS |
ATTAACGAAAACCCAGAGGC+AGG | 0.562042 | 7.3:+4627198 | MS.gene28614:CDS |
AGGAATTTACAAACACATCA+CGG | 0.562197 | 7.3:+4631533 | MS.gene28614:CDS |
ACGAAAACCCAGAGGCAGGA+TGG | 0.562692 | 7.3:+4627202 | MS.gene28614:CDS |
ACTTTGATGCAAGGACAGCT+TGG | 0.563627 | 7.3:+4628601 | MS.gene28614:CDS |
AAGAGAGGGACAAACGAATG+TGG | 0.568375 | 7.3:+4631880 | MS.gene28614:CDS |
ACGAAAACCCAGAGGCAGGA+TGG | 0.569512 | 7.3:+4618900 | MS.gene28614:CDS |
ATTGAAGATGATGTTACCGC+GGG | 0.576534 | 7.3:+4623934 | MS.gene28614:CDS |
ATGGCAGAAGTTTATAAGAA+CGG | 0.582738 | 7.3:+4621936 | MS.gene28614:CDS |
ATGGCAGAAGTTTATAAGAA+CGG | 0.582738 | 7.3:+4629750 | MS.gene28614:CDS |
AAAGGAATTTGATGCAAGGA+CGG | 0.586444 | 7.3:+4620786 | MS.gene28614:CDS |
CACAGGTTGGACAATTTAAG+CGG | 0.587345 | 7.3:+4628493 | MS.gene28614:intron |
ACACACTTTCTAACACACTT+GGG | 0.587515 | 7.3:-4621834 | None:intergenic |
GGAGTTTACAAACACATCAC+AGG | 0.588626 | 7.3:+4623566 | MS.gene28614:CDS |
AATCAGTGGAATACAAATTG+GGG | 0.590727 | 7.3:+4631745 | MS.gene28614:CDS |
ATGGAAACCAGATTTGGAAG+AGG | 0.593621 | 7.3:+4621859 | MS.gene28614:CDS |
TGCCAAAGGAATTTGATGCA+AGG | 0.596216 | 7.3:+4620782 | MS.gene28614:CDS |
TGACATGGATGCTGATGCTG+GGG | 0.603078 | 7.3:+4623993 | MS.gene28614:CDS |
AGAGAGGGACAAACGAATGT+GGG | 0.604399 | 7.3:+4631881 | MS.gene28614:CDS |
GGTTACTTCAAGATTAAGAG+AGG | 0.606673 | 7.3:+4623895 | MS.gene28614:CDS |
TGCCAAAGGACTTTGATGCA+AGG | 0.607536 | 7.3:+4628592 | MS.gene28614:CDS |
AAAATCATTAAAATTGCCAA+AGG | 0.607647 | 7.3:+4620768 | MS.gene28614:CDS |
AAAATCATTAAAATTGCCAA+AGG | 0.607647 | 7.3:+4628578 | MS.gene28614:CDS |
CCATGGTGTTGTCACTGAAG+AGG | 0.611230 | 7.3:+4621664 | MS.gene28614:CDS |
CCATGGCGTTGTCACTGAAG+AGG | 0.611230 | 7.3:+4629483 | MS.gene28614:CDS |
GAAATCCACAGCATGCAAGA+AGG | 0.613291 | 7.3:-4621583 | None:intergenic |
ATGCAGTAAAGCTGATTGGG+TGG | 0.614866 | 7.3:+4623606 | MS.gene28614:CDS |
ATGCAGTAAAGCTGATTGGG+TGG | 0.614866 | 7.3:+4631574 | MS.gene28614:CDS |
AAGAGAGGGACAAACGAATG+TGG | 0.620651 | 7.3:+4623910 | MS.gene28614:CDS |
AGGTACCGATAGATAAGAAG+CGG | 0.625784 | 7.3:-4618615 | None:intergenic |
AAGAAGGTCATTAACAGAGA+GGG | 0.626309 | 7.3:-4621567 | None:intergenic |
AAGAATGTCATTAACAGAGA+GGG | 0.626309 | 7.3:-4629386 | None:intergenic |
ACTTCTGCCATGATATCTTG+GGG | 0.630244 | 7.3:-4621924 | None:intergenic |
ACTTCTGCCATGATATCTTG+GGG | 0.630244 | 7.3:-4629738 | None:intergenic |
GGTTACTTCAAAATCAAGAG+AGG | 0.633977 | 7.3:+4631865 | MS.gene28614:CDS |
AATCAGTGGAATACAAATTG+GGG | 0.634269 | 7.3:+4623770 | MS.gene28614:CDS |
AAACCCAGAGGCAGGATGGG+AGG | 0.636231 | 7.3:+4618904 | MS.gene28614:CDS |
GTTACTTCAAAATCAAGAGA+GGG | 0.637658 | 7.3:+4631866 | MS.gene28614:CDS |
CCTCTTCAGTGACAACGCCA+TGG | 0.643016 | 7.3:-4629483 | None:intergenic |
TGTAAGAGAGGTGACTGACA+TGG | 0.644341 | 7.3:+4623978 | MS.gene28614:CDS |
ATCAGTGGAATACAAATTGG+GGG | 0.645008 | 7.3:+4631746 | MS.gene28614:CDS |
GTTACTTCAAGATTAAGAGA+GGG | 0.645507 | 7.3:+4623896 | MS.gene28614:CDS |
GGGAACAAGTGATGAAGGGG+AGG | 0.645737 | 7.3:+4623628 | MS.gene28614:CDS |
GGGAACAAGTGATGAAGGGG+AGG | 0.645737 | 7.3:+4631596 | MS.gene28614:CDS |
CAAATTGGATGTTCTCACCC+TGG | 0.646530 | 7.3:+4621789 | MS.gene28614:CDS |
CAAGAATGTCATTAACAGAG+AGG | 0.660112 | 7.3:-4629387 | None:intergenic |
TGTGAGAGAGGTGACTGACA+TGG | 0.665810 | 7.3:+4631948 | MS.gene28614:CDS |
TCAGTGGAATACAAATTGGG+GGG | 0.666680 | 7.3:+4631747 | MS.gene28614:CDS |
ATGACCTAGAATTCTCCCAA+TGG | 0.668317 | 7.3:-4628637 | None:intergenic |
GCACTACTCAGTTCACTTCG+GGG | 0.672617 | 7.3:-4628537 | None:intergenic |
CAAGAAGGTCATTAACAGAG+AGG | 0.673678 | 7.3:-4621568 | None:intergenic |
CCTCTTCAGTGACAACACCA+TGG | 0.676011 | 7.3:-4621664 | None:intergenic |
TGGCGATACTTAGCTCACCA+TGG | 0.676539 | 7.3:+4621647 | MS.gene28614:CDS |
GATATGCTGGCTCACAACCA+GGG | 0.678739 | 7.3:-4621806 | None:intergenic |
AATTGAAGATGATGTTACCG+CGG | 0.681649 | 7.3:+4623933 | MS.gene28614:CDS |
TTGTTGACAGATCGTTGAGG+CGG | 0.682962 | 7.3:+4627011 | MS.gene28614:intron |
TGGATATACTTAGCTCACCA+TGG | 0.685365 | 7.3:+4629466 | MS.gene28614:CDS |
ATGCTGTGGATTTCTCTGTG+GGG | 0.689084 | 7.3:+4621592 | MS.gene28614:CDS |
ACCGTAAAATTGAAGAAACG+GGG | 0.699497 | 7.3:-4627240 | None:intergenic |
ACCGTAAAATTGGAGAAACG+AGG | 0.709875 | 7.3:-4618938 | None:intergenic |
ATCACAGGTTCTGCACTAGG+TGG | 0.711206 | 7.3:+4623581 | MS.gene28614:CDS |
TTTGGTGGAAGGTAAACCCG+CGG | 0.716685 | 7.3:-4623950 | None:intergenic |
ATGATGATTCAGGGTCACTG+TGG | 0.717971 | 7.3:+4628886 | MS.gene28614:intron |
ATGATGATTCAGGGTCACTG+CGG | 0.739315 | 7.3:+4621067 | MS.gene28614:intron |
ACAGATTAACGAAAACCCAG+AGG | 0.757460 | 7.3:+4627194 | MS.gene28614:CDS |
ACAGATTAACGAAAACCCAG+AGG | 0.774853 | 7.3:+4618892 | MS.gene28614:CDS |
ACGTTGTTGACAGATCGTTG+AGG | 0.784719 | 7.3:+4627008 | MS.gene28614:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 4618569 | 4631996 | 4618569 | ID=MS.gene28614 |
chr7.3 | mRNA | 4618569 | 4631996 | 4618569 | ID=MS.gene28614.t1;Parent=MS.gene28614 |
chr7.3 | exon | 4618569 | 4618631 | 4618569 | ID=MS.gene28614.t1.exon1;Parent=MS.gene28614.t1 |
chr7.3 | CDS | 4618569 | 4618631 | 4618569 | ID=cds.MS.gene28614.t1;Parent=MS.gene28614.t1 |
chr7.3 | exon | 4618721 | 4618768 | 4618721 | ID=MS.gene28614.t1.exon2;Parent=MS.gene28614.t1 |
chr7.3 | CDS | 4618721 | 4618768 | 4618721 | ID=cds.MS.gene28614.t1;Parent=MS.gene28614.t1 |
chr7.3 | exon | 4618878 | 4618958 | 4618878 | ID=MS.gene28614.t1.exon3;Parent=MS.gene28614.t1 |
chr7.3 | CDS | 4618878 | 4618958 | 4618878 | ID=cds.MS.gene28614.t1;Parent=MS.gene28614.t1 |
chr7.3 | exon | 4620688 | 4620844 | 4620688 | ID=MS.gene28614.t1.exon4;Parent=MS.gene28614.t1 |
chr7.3 | CDS | 4620688 | 4620844 | 4620688 | ID=cds.MS.gene28614.t1;Parent=MS.gene28614.t1 |
chr7.3 | exon | 4620966 | 4620970 | 4620966 | ID=MS.gene28614.t1.exon5;Parent=MS.gene28614.t1 |
chr7.3 | CDS | 4620966 | 4620970 | 4620966 | ID=cds.MS.gene28614.t1;Parent=MS.gene28614.t1 |
chr7.3 | exon | 4621079 | 4621153 | 4621079 | ID=MS.gene28614.t1.exon6;Parent=MS.gene28614.t1 |
chr7.3 | CDS | 4621079 | 4621153 | 4621079 | ID=cds.MS.gene28614.t1;Parent=MS.gene28614.t1 |
chr7.3 | exon | 4621560 | 4621685 | 4621560 | ID=MS.gene28614.t1.exon7;Parent=MS.gene28614.t1 |
chr7.3 | CDS | 4621560 | 4621685 | 4621560 | ID=cds.MS.gene28614.t1;Parent=MS.gene28614.t1 |
chr7.3 | exon | 4621771 | 4621989 | 4621771 | ID=MS.gene28614.t1.exon8;Parent=MS.gene28614.t1 |
chr7.3 | CDS | 4621771 | 4621989 | 4621771 | ID=cds.MS.gene28614.t1;Parent=MS.gene28614.t1 |
chr7.3 | exon | 4623545 | 4623658 | 4623545 | ID=MS.gene28614.t1.exon9;Parent=MS.gene28614.t1 |
chr7.3 | CDS | 4623545 | 4623658 | 4623545 | ID=cds.MS.gene28614.t1;Parent=MS.gene28614.t1 |
chr7.3 | exon | 4623761 | 4623796 | 4623761 | ID=MS.gene28614.t1.exon10;Parent=MS.gene28614.t1 |
chr7.3 | CDS | 4623761 | 4623796 | 4623761 | ID=cds.MS.gene28614.t1;Parent=MS.gene28614.t1 |
chr7.3 | exon | 4623892 | 4624014 | 4623892 | ID=MS.gene28614.t1.exon11;Parent=MS.gene28614.t1 |
chr7.3 | CDS | 4623892 | 4624014 | 4623892 | ID=cds.MS.gene28614.t1;Parent=MS.gene28614.t1 |
chr7.3 | exon | 4627021 | 4627080 | 4627021 | ID=MS.gene28614.t1.exon12;Parent=MS.gene28614.t1 |
chr7.3 | CDS | 4627021 | 4627080 | 4627021 | ID=cds.MS.gene28614.t1;Parent=MS.gene28614.t1 |
chr7.3 | exon | 4627180 | 4627260 | 4627180 | ID=MS.gene28614.t1.exon13;Parent=MS.gene28614.t1 |
chr7.3 | CDS | 4627180 | 4627260 | 4627180 | ID=cds.MS.gene28614.t1;Parent=MS.gene28614.t1 |
chr7.3 | exon | 4628498 | 4628654 | 4628498 | ID=MS.gene28614.t1.exon14;Parent=MS.gene28614.t1 |
chr7.3 | CDS | 4628498 | 4628654 | 4628498 | ID=cds.MS.gene28614.t1;Parent=MS.gene28614.t1 |
chr7.3 | exon | 4628788 | 4628792 | 4628788 | ID=MS.gene28614.t1.exon15;Parent=MS.gene28614.t1 |
chr7.3 | CDS | 4628788 | 4628792 | 4628788 | ID=cds.MS.gene28614.t1;Parent=MS.gene28614.t1 |
chr7.3 | exon | 4628898 | 4628972 | 4628898 | ID=MS.gene28614.t1.exon16;Parent=MS.gene28614.t1 |
chr7.3 | CDS | 4628898 | 4628972 | 4628898 | ID=cds.MS.gene28614.t1;Parent=MS.gene28614.t1 |
chr7.3 | exon | 4629379 | 4629504 | 4629379 | ID=MS.gene28614.t1.exon17;Parent=MS.gene28614.t1 |
chr7.3 | CDS | 4629379 | 4629504 | 4629379 | ID=cds.MS.gene28614.t1;Parent=MS.gene28614.t1 |
chr7.3 | exon | 4629585 | 4629803 | 4629585 | ID=MS.gene28614.t1.exon18;Parent=MS.gene28614.t1 |
chr7.3 | CDS | 4629585 | 4629803 | 4629585 | ID=cds.MS.gene28614.t1;Parent=MS.gene28614.t1 |
chr7.3 | exon | 4631513 | 4631626 | 4631513 | ID=MS.gene28614.t1.exon19;Parent=MS.gene28614.t1 |
chr7.3 | CDS | 4631513 | 4631626 | 4631513 | ID=cds.MS.gene28614.t1;Parent=MS.gene28614.t1 |
chr7.3 | exon | 4631736 | 4631771 | 4631736 | ID=MS.gene28614.t1.exon20;Parent=MS.gene28614.t1 |
chr7.3 | CDS | 4631736 | 4631771 | 4631736 | ID=cds.MS.gene28614.t1;Parent=MS.gene28614.t1 |
chr7.3 | exon | 4631862 | 4631996 | 4631862 | ID=MS.gene28614.t1.exon21;Parent=MS.gene28614.t1 |
chr7.3 | CDS | 4631862 | 4631996 | 4631862 | ID=cds.MS.gene28614.t1;Parent=MS.gene28614.t1 |
Gene Sequence |
Protein sequence |