AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene071499

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene071499.t1 MTR_4g120270 88.506 261 16 3 1 257 22 272 2.33e-149 418
MS.gene071499.t1 MTR_2g436100 52.632 247 92 10 1 239 34 263 3.76e-68 212
MS.gene071499.t1 MTR_8g023400 40.000 190 90 6 1 184 30 201 4.11e-33 122
MS.gene071499.t1 MTR_7g117540 44.928 138 62 3 1 137 25 149 3.11e-28 109
MS.gene071499.t1 MTR_3g464780 53.012 83 33 1 58 134 95 177 2.77e-27 106
MS.gene071499.t1 MTR_6g087150 45.385 130 59 4 10 134 42 164 1.37e-25 103
MS.gene071499.t1 MTR_3g110190 40.580 138 68 3 10 140 13 143 1.67e-25 103
MS.gene071499.t1 MTR_7g108855 47.273 110 46 2 66 171 67 168 2.37e-24 96.7
MS.gene071499.t1 MTR_8g089880 41.401 157 71 6 65 213 127 270 3.12e-24 98.6
MS.gene071499.t1 MTR_2g090950 45.283 106 47 2 65 162 91 193 9.79e-24 96.3
MS.gene071499.t1 MTR_1g082550 46.939 98 46 3 62 154 95 191 1.23e-23 98.6
MS.gene071499.t1 MTR_7g113800 53.012 83 34 1 61 138 87 169 1.75e-23 97.8
MS.gene071499.t1 MTR_3g100400 56.164 73 30 1 65 135 130 202 2.97e-23 97.8
MS.gene071499.t1 MTR_5g066250 35.915 142 84 3 45 183 114 251 3.16e-23 97.8
MS.gene071499.t1 MTR_5g064990 38.462 156 75 6 7 155 67 208 3.79e-23 97.4
MS.gene071499.t1 MTR_4g063070 40.268 149 67 6 1 134 240 381 4.46e-23 97.1
MS.gene071499.t1 MTR_2g096350 46.591 88 43 1 66 149 108 195 5.13e-23 94.0
MS.gene071499.t1 MTR_5g071930 38.000 150 85 3 1 149 8 150 6.46e-23 93.2
MS.gene071499.t1 MTR_4g093830 32.278 158 97 3 1 150 58 213 8.09e-23 95.9
MS.gene071499.t1 MTR_2g090905 47.778 90 39 1 54 135 28 117 9.66e-23 90.5
MS.gene071499.t1 MTR_3g091620 38.583 127 63 3 56 167 92 218 9.87e-23 95.9
MS.gene071499.t1 MTR_5g064980 41.071 112 53 2 63 169 106 209 5.72e-22 94.0
MS.gene071499.t1 MTR_8g073120 44.545 110 51 4 35 140 46 149 9.08e-22 90.1
MS.gene071499.t1 MTR_1g043410 38.194 144 72 5 3 134 30 168 2.31e-21 91.7
MS.gene071499.t1 MTR_3g099650 35.811 148 77 3 6 148 61 195 4.96e-21 91.3
MS.gene071499.t1 MTR_5g030010 31.746 189 101 6 7 169 58 244 7.19e-21 90.9
MS.gene071499.t1 MTR_5g064890 32.057 209 118 9 9 201 59 259 7.99e-21 90.5
MS.gene071499.t1 MTR_2g009310 38.372 172 72 8 65 204 135 304 9.17e-21 90.5
MS.gene071499.t1 MTR_3g071300 32.168 143 76 4 2 138 28 155 1.14e-20 86.3
MS.gene071499.t1 MTR_8g066780 32.000 150 96 3 7 152 58 205 1.50e-20 89.7
MS.gene071499.t1 MTR_1g070140 46.753 77 38 1 63 136 101 177 1.70e-20 89.4
MS.gene071499.t1 MTR_3g094000 43.820 89 46 1 62 146 88 176 3.38e-20 85.5
MS.gene071499.t1 MTR_1g074190 36.957 138 64 5 5 134 54 176 4.30e-20 88.2
MS.gene071499.t1 MTR_5g024730 34.759 187 91 7 5 179 34 201 5.61e-20 85.5
MS.gene071499.t1 MTR_6g007737 35.374 147 73 5 1 136 71 206 6.33e-20 88.2
MS.gene071499.t1 MTR_7g073200 38.710 124 64 3 11 131 35 149 6.96e-20 84.3
MS.gene071499.t1 MTR_1g492830 34.532 139 72 4 2 134 8 133 8.57e-20 85.5
MS.gene071499.t1 MTR_5g082940 44.706 85 43 1 52 132 62 146 9.72e-20 84.0
MS.gene071499.t1 MTR_8g071815 37.681 138 67 4 9 139 15 140 1.26e-19 84.0
MS.gene071499.t1 MTR_4g106680 33.557 149 76 5 1 137 43 180 1.39e-19 86.3
MS.gene071499.t1 MTR_7g116220 47.368 76 35 2 62 132 67 142 2.16e-19 83.2
MS.gene071499.t1 MTR_4g129420 43.396 106 49 2 65 167 117 214 3.30e-19 87.0
MS.gene071499.t1 MTR_5g026730 41.584 101 50 3 52 145 52 150 3.46e-19 82.4
MS.gene071499.t1 MTR_8g066740 41.379 87 45 1 64 144 75 161 1.08e-18 84.0
MS.gene071499.t1 MTR_5g076990 42.045 88 45 1 63 144 74 161 2.11e-18 83.2
MS.gene071499.t1 MTR_6g055030 44.048 84 42 2 63 141 95 178 2.34e-18 83.2
MS.gene071499.t1 MTR_5g026720 36.792 106 59 3 51 148 48 153 4.25e-18 79.3
MS.gene071499.t1 MTR_8g063660 37.313 134 77 3 5 134 9 139 4.48e-18 82.4
MS.gene071499.t1 MTR_5g034790 35.766 137 81 3 1 131 49 184 4.64e-18 82.8
MS.gene071499.t1 MTR_8g092840 44.444 72 37 1 63 131 111 182 5.70e-18 80.5
MS.gene071499.t1 MTR_8g092960 44.444 72 37 1 63 131 101 172 5.89e-18 80.1
MS.gene071499.t1 MTR_3g086730 32.370 173 83 5 5 158 1 158 6.83e-18 80.5
MS.gene071499.t1 MTR_7g116180 47.297 74 34 2 64 132 66 139 8.28e-18 79.0
MS.gene071499.t1 MTR_3g116000 35.385 130 68 3 5 131 30 146 8.76e-18 79.3
MS.gene071499.t1 MTR_1g070425 47.297 74 34 2 64 132 67 140 1.01e-17 79.0
MS.gene071499.t1 MTR_7g076250 33.696 92 58 1 65 153 63 154 1.17e-17 79.0
MS.gene071499.t1 MTR_8g092985 43.243 74 39 1 61 131 107 180 1.21e-17 79.3
MS.gene071499.t1 MTR_8g093010 38.298 94 50 2 41 131 88 176 1.77e-17 79.0
MS.gene071499.t1 MTR_7g096690 40.000 80 42 1 63 136 68 147 2.06e-17 80.5
MS.gene071499.t1 MTR_3g086700 33.775 151 74 4 5 144 1 136 2.19e-17 78.2
MS.gene071499.t1 MTR_8g009190 35.971 139 73 2 1 134 23 150 3.06e-17 80.1
MS.gene071499.t1 MTR_3g078120 29.787 141 81 3 1 136 5 132 4.61e-17 76.3
MS.gene071499.t1 MTR_2g055790 45.070 71 38 1 64 134 76 145 6.35e-17 77.0
MS.gene071499.t1 MTR_8g092930 43.662 71 37 1 64 131 111 181 8.28e-17 77.4
MS.gene071499.t1 MTR_7g116200 47.143 70 36 1 64 132 67 136 1.15e-16 75.9
MS.gene071499.t1 MTR_5g022920 43.421 76 39 1 60 131 156 231 1.90e-16 76.6
MS.gene071499.t1 MTR_3g095560 63.636 44 16 0 88 131 135 178 4.44e-16 75.5
MS.gene071499.t1 MTR_7g079280 36.782 87 51 1 65 147 80 166 5.85e-16 73.9
MS.gene071499.t1 MTR_8g028465 36.047 86 55 0 62 147 87 172 6.57e-16 74.3
MS.gene071499.t1 MTR_2g044570 52.174 69 28 2 74 137 63 131 9.77e-16 75.5
MS.gene071499.t1 MTR_2g041200 56.897 58 23 1 88 145 108 163 1.07e-15 73.2
MS.gene071499.t1 MTR_8g092970 61.364 44 17 0 88 131 130 173 1.54e-15 73.6
MS.gene071499.t1 MTR_8g092990 61.364 44 17 0 88 131 140 183 1.68e-15 73.9
MS.gene071499.t1 MTR_7g116210 45.714 70 37 1 64 132 9 78 1.70e-15 70.9
MS.gene071499.t1 MTR_4g056590 40.845 71 41 1 61 131 96 165 1.70e-15 73.2
MS.gene071499.t1 MTR_1g100737 38.158 76 40 1 64 132 91 166 1.98e-15 72.8
MS.gene071499.t1 MTR_2g035800 40.541 74 42 1 65 136 76 149 3.98e-15 71.2
MS.gene071499.t1 MTR_3g078470 40.541 74 40 1 63 132 74 147 6.89e-15 72.0
MS.gene071499.t1 MTR_3g078450 45.833 72 35 2 65 132 76 147 9.90e-15 71.6
MS.gene071499.t1 MTR_3g087900 50.820 61 28 2 75 134 55 114 1.09e-14 70.1
MS.gene071499.t1 MTR_8g074900 46.269 67 34 1 65 131 158 222 1.67e-14 70.9
MS.gene071499.t1 MTR_5g092790 35.922 103 53 4 44 134 129 230 2.01e-14 70.9
MS.gene071499.t1 MTR_7g059360 41.379 87 40 1 88 174 157 232 2.48e-14 70.9
MS.gene071499.t1 MTR_4g094725 41.892 74 39 1 62 131 75 148 2.67e-14 68.9
MS.gene071499.t1 MTR_8g032690 43.860 57 31 1 76 131 5 61 3.30e-14 67.4
MS.gene071499.t1 MTR_3g114500 52.083 48 23 0 88 135 70 117 6.68e-14 67.0
MS.gene071499.t1 MTR_5g009210 45.205 73 32 2 65 131 287 357 1.32e-13 70.1
MS.gene071499.t1 MTR_5g092750 41.333 75 40 2 64 134 156 230 1.70e-13 68.6
MS.gene071499.t1 MTR_1g090480 35.556 90 52 2 65 148 72 161 1.73e-13 67.0
MS.gene071499.t1 MTR_8g027980 40.385 104 46 4 70 158 95 197 2.25e-13 68.6
MS.gene071499.t1 MTR_5g009200 43.662 71 36 2 65 131 322 392 2.51e-13 69.3
MS.gene071499.t1 MTR_4g030070 35.556 90 49 2 65 145 85 174 3.04e-13 67.4
MS.gene071499.t1 MTR_5g009190 43.662 71 36 2 65 131 266 336 4.49e-13 68.2
MS.gene071499.t1 MTR_7g079290 34.091 88 47 2 55 131 110 197 4.71e-13 66.6
MS.gene071499.t1 MTR_6g055030 49.206 63 31 1 80 141 85 147 4.95e-13 67.8
MS.gene071499.t1 MTR_3g078520 37.179 78 46 1 58 132 69 146 6.84e-13 65.5
MS.gene071499.t1 MTR_4g108830 39.241 79 43 2 59 134 143 219 7.35e-13 66.2
MS.gene071499.t1 MTR_6g007680 36.986 73 44 1 64 134 39 111 7.99e-13 64.7
MS.gene071499.t1 MTR_4g108830 39.241 79 43 2 59 134 115 191 8.90e-13 65.5
MS.gene071499.t1 MTR_1g026070 31.183 93 59 2 47 135 26 117 9.16e-13 64.3
MS.gene071499.t1 MTR_1g056350 35.632 87 51 2 65 146 74 160 1.87e-12 64.3
MS.gene071499.t1 MTR_8g099495 38.356 73 37 2 65 131 319 389 1.88e-12 66.6
MS.gene071499.t1 MTR_4g022410 55.102 49 22 0 88 136 112 160 2.06e-12 64.3
MS.gene071499.t1 MTR_3g081030 62.791 43 16 0 89 131 119 161 2.53e-12 64.7
MS.gene071499.t1 MTR_8g098770 43.836 73 40 1 74 145 71 143 2.79e-12 63.5
MS.gene071499.t1 MTR_3g012550 30.496 141 85 5 7 139 23 158 3.65e-12 63.5
MS.gene071499.t1 MTR_4g129335 42.857 70 38 1 71 138 82 151 6.97e-12 62.8
MS.gene071499.t1 MTR_4g129370 42.857 70 38 1 71 138 82 151 6.97e-12 62.8
MS.gene071499.t1 MTR_6g007670 34.568 81 48 2 71 150 14 90 8.53e-12 63.9
MS.gene071499.t1 MTR_8g099515 37.500 80 36 2 61 131 305 379 1.00e-11 64.7
MS.gene071499.t1 MTR_2g079320 54.545 44 20 0 88 131 158 201 1.43e-11 62.4
MS.gene071499.t1 MTR_1g090460 41.667 72 37 2 78 148 83 150 1.71e-11 61.2
MS.gene071499.t1 MTR_5g066700 50.877 57 24 3 77 131 47 101 2.58e-11 60.5
MS.gene071499.t1 MTR_8g019710 47.917 48 25 0 88 135 53 100 2.77e-11 60.1
MS.gene071499.t1 MTR_5g066690 50.877 57 24 3 77 131 47 101 3.90e-11 59.7
MS.gene071499.t1 MTR_8g027745 41.379 58 34 0 89 146 314 371 4.18e-11 62.8
MS.gene071499.t1 MTR_3g078540 39.474 76 41 2 62 132 47 122 8.56e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene071499.t1 AT3G16720 48.736 277 114 11 1 254 31 302 1.05e-59 191
MS.gene071499.t1 AT4G15975 45.333 150 63 6 18 164 18 151 7.69e-35 125
MS.gene071499.t1 AT3G62690 44.604 139 69 3 1 137 29 161 6.12e-31 115
MS.gene071499.t1 AT2G47560 33.755 237 111 7 1 230 29 226 4.52e-29 110
MS.gene071499.t1 AT1G72310 39.521 167 72 6 1 146 25 183 4.16e-28 109
MS.gene071499.t1 AT2G42360 32.353 238 102 8 1 233 32 215 3.17e-26 102
MS.gene071499.t1 AT1G53820 40.541 148 67 4 1 134 25 165 4.93e-26 103
MS.gene071499.t1 AT4G40070 46.078 102 39 2 65 150 95 196 2.55e-24 99.8
MS.gene071499.t1 AT5G43420 37.821 156 62 4 6 134 36 183 3.55e-24 100
MS.gene071499.t1 AT1G72200 34.158 202 110 7 11 203 66 253 4.59e-24 100
MS.gene071499.t1 AT5G58580 43.810 105 56 1 53 154 99 203 1.78e-23 97.1
MS.gene071499.t1 AT1G04360 32.331 266 115 13 6 234 43 280 6.95e-23 96.7
MS.gene071499.t1 AT1G72220 32.093 215 121 7 2 199 83 289 7.88e-23 96.7
MS.gene071499.t1 AT2G20030 58.333 72 28 1 65 134 98 169 8.71e-23 96.3
MS.gene071499.t1 AT1G23980 36.301 146 68 3 1 132 53 187 1.14e-22 95.9
MS.gene071499.t1 AT2G35420 36.620 142 76 4 6 145 30 159 1.19e-22 93.6
MS.gene071499.t1 AT4G17905 29.167 216 135 6 1 202 61 272 1.25e-22 94.7
MS.gene071499.t1 AT5G17600 50.000 90 41 2 65 150 116 205 1.46e-22 95.5
MS.gene071499.t1 AT2G34990 35.616 146 71 4 1 138 15 145 1.49e-22 94.4
MS.gene071499.t1 AT2G34990 35.616 146 71 4 1 138 37 167 1.52e-22 94.7
MS.gene071499.t1 AT3G05200 48.039 102 46 3 61 157 95 194 1.90e-22 95.5
MS.gene071499.t1 AT4G17905 29.167 216 135 6 1 202 87 298 2.56e-22 94.4
MS.gene071499.t1 AT4G33565 59.211 76 27 2 65 137 191 265 2.62e-22 94.7
MS.gene071499.t1 AT5G05810 56.164 73 30 1 65 135 120 192 5.77e-22 94.4
MS.gene071499.t1 AT2G27940 51.429 70 33 1 64 132 114 183 7.17e-22 91.3
MS.gene071499.t1 AT3G48030 35.099 151 92 2 1 148 41 188 1.13e-21 91.7
MS.gene071499.t1 AT4G28890 55.556 72 30 1 65 134 97 168 1.59e-21 93.2
MS.gene071499.t1 AT5G27420 36.478 159 63 6 62 210 92 222 2.22e-21 92.0
MS.gene071499.t1 AT2G35000 38.571 140 66 4 1 132 51 178 2.54e-21 92.0
MS.gene071499.t1 AT3G03550 58.571 70 25 2 66 132 134 202 3.45e-21 91.7
MS.gene071499.t1 AT3G48030 35.065 154 88 3 1 148 119 266 3.61e-21 91.3
MS.gene071499.t1 AT1G22500 49.425 87 39 2 65 146 89 175 5.12e-21 91.3
MS.gene071499.t1 AT3G14320 48.750 80 40 1 56 134 54 133 6.01e-21 88.2
MS.gene071499.t1 AT4G09120 47.000 100 45 3 47 138 73 172 7.77e-21 90.5
MS.gene071499.t1 AT1G32361 37.008 127 72 3 30 156 101 219 8.29e-21 90.1
MS.gene071499.t1 AT3G10910 35.714 140 85 2 11 145 34 173 1.30e-20 86.7
MS.gene071499.t1 AT1G35330 49.425 87 39 2 57 138 92 178 2.27e-20 89.0
MS.gene071499.t1 AT5G01880 49.383 81 39 1 53 131 67 147 2.91e-20 85.1
MS.gene071499.t1 AT5G05280 35.606 132 71 3 1 131 37 155 3.60e-20 85.1
MS.gene071499.t1 AT1G76410 48.649 74 35 1 61 131 73 146 4.61e-20 85.1
MS.gene071499.t1 AT5G40250 33.987 153 69 4 1 132 45 186 5.47e-20 88.6
MS.gene071499.t1 AT1G20823 37.594 133 67 5 5 131 31 153 5.75e-20 85.1
MS.gene071499.t1 AT5G10380 53.425 73 30 2 65 134 109 180 7.79e-20 87.0
MS.gene071499.t1 AT4G09110 48.750 80 36 2 64 138 93 172 1.31e-19 86.3
MS.gene071499.t1 AT2G42350 50.685 73 35 1 64 135 74 146 1.90e-19 84.3
MS.gene071499.t1 AT3G18773 37.313 134 68 4 1 131 52 172 1.95e-19 84.3
MS.gene071499.t1 AT5G42200 33.803 142 72 6 1 138 28 151 2.28e-19 82.8
MS.gene071499.t1 AT4G30400 55.714 70 28 1 65 131 107 176 3.67e-19 86.7
MS.gene071499.t1 AT3G60220 44.231 104 44 2 68 166 91 185 4.85e-19 85.1
MS.gene071499.t1 AT4G09100 48.684 76 34 1 64 134 55 130 7.11e-19 80.5
MS.gene071499.t1 AT2G18650 52.113 71 31 1 65 132 99 169 7.32e-19 85.5
MS.gene071499.t1 AT4G09130 51.316 76 32 1 62 132 88 163 1.94e-18 84.0
MS.gene071499.t1 AT5G66070 43.662 71 40 0 61 131 148 218 3.42e-18 80.9
MS.gene071499.t1 AT5G66070 43.662 71 40 0 61 131 148 218 3.42e-18 80.9
MS.gene071499.t1 AT1G49220 36.923 130 61 4 7 131 64 177 6.13e-18 80.9
MS.gene071499.t1 AT5G66070 43.662 71 40 0 61 131 172 242 6.55e-18 80.9
MS.gene071499.t1 AT4G17920 30.729 192 106 6 52 227 73 253 1.23e-17 80.9
MS.gene071499.t1 AT3G18930 47.561 82 31 2 65 134 120 201 1.61e-17 81.6
MS.gene071499.t1 AT3G18930 47.561 82 31 2 65 134 120 201 1.61e-17 81.6
MS.gene071499.t1 AT3G18930 47.561 82 31 2 65 134 120 201 1.61e-17 81.6
MS.gene071499.t1 AT3G19140 46.250 80 42 1 57 135 46 125 2.65e-17 76.6
MS.gene071499.t1 AT1G49200 34.074 135 70 3 1 131 59 178 5.15e-17 77.8
MS.gene071499.t1 AT4G17245 35.862 145 69 5 5 148 41 162 5.53e-17 76.6
MS.gene071499.t1 AT2G17450 33.824 136 61 4 5 131 29 144 7.25e-17 76.6
MS.gene071499.t1 AT1G49210 34.328 134 71 3 1 131 58 177 8.08e-17 77.4
MS.gene071499.t1 AT1G74410 41.333 75 42 1 63 135 148 222 2.16e-16 76.3
MS.gene071499.t1 AT3G20395 42.647 68 39 0 64 131 146 213 4.04e-16 75.5
MS.gene071499.t1 AT5G57750 35.455 110 62 2 66 172 96 199 6.98e-16 74.7
MS.gene071499.t1 AT2G46493 43.836 73 35 2 64 131 109 180 1.75e-15 72.8
MS.gene071499.t1 AT4G10150 29.577 142 87 4 1 138 28 160 4.69e-15 72.8
MS.gene071499.t1 AT5G46650 32.847 137 80 4 1 131 27 157 4.74e-15 73.6
MS.gene071499.t1 AT4G35840 40.541 74 39 1 63 131 160 233 2.06e-14 70.9
MS.gene071499.t1 AT3G11110 32.353 136 67 3 2 134 39 152 2.46e-14 69.3
MS.gene071499.t1 AT5G47610 44.286 70 36 1 68 134 83 152 3.35e-14 68.9
MS.gene071499.t1 AT4G10160 34.694 98 61 3 54 148 60 157 4.15e-14 70.1
MS.gene071499.t1 AT2G46160 37.500 80 40 1 62 131 101 180 4.15e-14 69.7
MS.gene071499.t1 AT2G46160 37.500 80 40 1 62 131 101 180 4.15e-14 69.7
MS.gene071499.t1 AT3G61550 36.082 97 48 2 61 144 95 190 4.63e-14 69.7
MS.gene071499.t1 AT2G46494 31.061 132 75 4 10 131 233 358 4.68e-14 71.2
MS.gene071499.t1 AT5G53110 45.333 75 37 2 61 131 298 372 5.09e-14 71.2
MS.gene071499.t1 AT1G33480 31.783 129 72 4 4 131 29 142 6.53e-14 70.1
MS.gene071499.t1 AT2G18670 44.000 75 39 1 63 134 81 155 7.03e-14 68.6
MS.gene071499.t1 AT4G35480 54.167 48 22 0 84 131 108 155 9.47e-14 68.6
MS.gene071499.t1 AT2G34000 40.541 74 38 1 64 131 60 133 1.21e-13 67.0
MS.gene071499.t1 AT1G28040 40.260 77 40 2 60 131 220 295 1.56e-13 69.3
MS.gene071499.t1 AT2G17730 37.838 74 41 1 63 131 165 238 2.23e-13 68.2
MS.gene071499.t1 AT2G35910 36.905 84 51 1 65 146 121 204 2.31e-13 67.8
MS.gene071499.t1 AT2G46495 42.105 76 37 2 62 131 260 334 2.51e-13 69.3
MS.gene071499.t1 AT2G46495 42.105 76 37 2 62 131 288 362 2.55e-13 69.3
MS.gene071499.t1 AT5G07040 43.243 74 38 2 62 131 63 136 3.47e-13 65.9
MS.gene071499.t1 AT1G49230 59.091 44 18 0 88 131 130 173 1.16e-12 65.9
MS.gene071499.t1 AT4G30370 39.437 71 41 1 63 131 87 157 1.42e-12 64.7
MS.gene071499.t1 AT4G24015 45.455 66 33 1 89 154 105 167 1.48e-12 64.7
MS.gene071499.t1 AT3G60966 56.000 50 22 0 89 138 62 111 1.82e-12 63.5
MS.gene071499.t1 AT2G25410 43.243 74 35 2 65 132 298 370 2.07e-12 66.6
MS.gene071499.t1 AT1G80400 33.673 98 38 2 63 134 303 399 3.97e-12 65.9
MS.gene071499.t1 AT2G44578 48.000 50 26 0 89 138 70 119 9.16e-12 61.6
MS.gene071499.t1 AT5G66160 29.545 132 64 5 6 134 172 277 1.13e-11 63.9
MS.gene071499.t1 AT3G47990 41.558 77 43 2 58 134 148 222 1.30e-11 63.9
MS.gene071499.t1 AT3G47990 41.558 77 43 2 58 134 148 222 1.30e-11 63.9
MS.gene071499.t1 AT3G47990 41.558 77 43 2 58 134 148 222 1.30e-11 63.9
MS.gene071499.t1 AT3G47990 41.558 77 43 2 58 134 189 263 1.57e-11 63.9
MS.gene071499.t1 AT5G66160 30.233 129 61 5 6 131 172 274 1.80e-11 63.2
MS.gene071499.t1 AT3G47990 41.558 77 43 2 58 134 205 279 2.25e-11 63.5
MS.gene071499.t1 AT5G36001 43.103 58 33 0 89 146 264 321 2.35e-11 63.2
MS.gene071499.t1 AT5G06490 39.655 58 35 0 89 146 129 186 2.74e-11 61.6
MS.gene071499.t1 AT2G44581 46.000 50 27 0 89 138 70 119 4.54e-11 59.7
MS.gene071499.t1 AT2G28920 48.936 47 24 0 89 135 93 139 6.85e-11 59.3
MS.gene071499.t1 AT1G53010 41.026 78 37 2 63 131 95 172 7.75e-11 60.1

Find 0 sgRNAs with CRISPR-Local

Find 81 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGAAAACTATGATTACATT+TGG + 32559:3078-3097 None:intergenic 20.0%
!! TGAAAACTATGATTACATTT+GGG + 32559:3077-3096 None:intergenic 20.0%
!!! ATATTGATTGTATTGATATG+TGG - 32559:3096-3115 MS.gene071499:CDS 20.0%
!! ACAGAGCATTATTATGATAA+CGG + 32559:2790-2809 None:intergenic 25.0%
TGGAGGAAAATTTGAAAACT+GGG + 32559:2983-3002 None:intergenic 30.0%
TTCAAACTCCGATAAACAAA+CGG + 32559:3030-3049 None:intergenic 30.0%
TTGGAGGAAAATTTGAAAAC+TGG + 32559:2984-3003 None:intergenic 30.0%
! TTTCAAATTTTCCTCCAAGA+CGG - 32559:2986-3005 MS.gene071499:CDS 30.0%
AAAAGATGAAAGGTTGACGA+CGG + 32559:2884-2903 None:intergenic 35.0%
GAACAAGACGAAGAAAATTC+CGG + 32559:3269-3288 None:intergenic 35.0%
TGTTTATCGGAGTTTGAAGA+TGG - 32559:3032-3051 MS.gene071499:CDS 35.0%
! ATCAATTGTCACTTCTTGTC+TGG + 32559:3186-3205 None:intergenic 35.0%
! GGTAGTATCGAATTAGGAAA+TGG + 32559:2815-2834 None:intergenic 35.0%
! GTAGAAGGTAGTATCGAATT+AGG + 32559:2821-2840 None:intergenic 35.0%
! GTGATTCACCATCATCTTTT+CGG - 32559:3384-3403 MS.gene071499:CDS 35.0%
! TCAACCTTTCATCTTTTACG+TGG - 32559:2887-2906 MS.gene071499:CDS 35.0%
!! TTATTATGATAACGGCGAAG+AGG + 32559:2782-2801 None:intergenic 35.0%
AAGAAAATTCCGGTTCAGAC+CGG + 32559:3259-3278 None:intergenic 40.0%
GACAATTGATGTGTGTGAAC+CGG - 32559:3196-3215 MS.gene071499:CDS 40.0%
GAGTTTGAAGATGGAGAAAC+GGG - 32559:3041-3060 MS.gene071499:CDS 40.0%
GGAGTTTGAAGATGGAGAAA+CGG - 32559:3040-3059 MS.gene071499:CDS 40.0%
TTACCATTGAGATTCCGAGA+AGG - 32559:3318-3337 MS.gene071499:CDS 40.0%
TTGGTTTCCTTTCTCTGCTA+AGG + 32559:3445-3464 None:intergenic 40.0%
! GTTCTGGTGATGAAATGAAC+CGG - 32559:3237-3256 MS.gene071499:CDS 40.0%
!! TGTGAACCGGAACTTGTTTT+GGG - 32559:3209-3228 MS.gene071499:CDS 40.0%
AACGACAACACACGACTCAT+TGG + 32559:3413-3432 None:intergenic 45.0%
AACGGCGAAGAGGATGATAA+TGG + 32559:2772-2791 None:intergenic 45.0%
ACTCCTTCTCGGAATCTCAA+TGG + 32559:3324-3343 None:intergenic 45.0%
ATTGGCGACCGAAAAGATGA+TGG + 32559:3395-3414 None:intergenic 45.0%
CGAGAATCCTTAGCAGAGAA+AGG - 32559:3435-3454 MS.gene071499:CDS 45.0%
CTCGAACCCAAAACAAGTTC+CGG + 32559:3218-3237 None:intergenic 45.0%
GGAATGCGCCGTTTGTTTAT+CGG - 32559:3019-3038 MS.gene071499:CDS 45.0%
GGGTCCACGTAAAAGATGAA+AGG + 32559:2894-2913 None:intergenic 45.0%
TACTGCAGAACGAGGTGAAA+AGG - 32559:3496-3515 MS.gene071499:CDS 45.0%
TGAAATGAACCGGTCTGAAC+CGG - 32559:3247-3266 MS.gene071499:CDS 45.0%
TTGAAGATGGAGAAACGGGT+CGG - 32559:3045-3064 MS.gene071499:CDS 45.0%
! ATTTTCCTCCAAGACGGATC+AGG - 32559:2992-3011 MS.gene071499:CDS 45.0%
!! GTGTGAACCGGAACTTGTTT+TGG - 32559:3208-3227 MS.gene071499:CDS 45.0%
!!! CTTGTTTTGGGTTCGAGTTC+TGG - 32559:3221-3240 MS.gene071499:CDS 45.0%
ACCAAGCATTTCTCCGTCGT+TGG - 32559:3460-3479 MS.gene071499:CDS 50.0%
ACCTCGTTCTGCAGTATCTG+CGG + 32559:3492-3511 None:intergenic 50.0%
ATCACAACTCGACTCTCCCA+CGG + 32559:3369-3388 None:intergenic 50.0%
CCATCGGATTCACTCCTTCT+CGG + 32559:3335-3354 None:intergenic 50.0%
TCCAACGACGGAGAAATGCT+TGG + 32559:3464-3483 None:intergenic 50.0%
TCTTGTCTGGTCGCTTGAAC+CGG + 32559:3173-3192 None:intergenic 50.0%
TGAAAGGTTGACGACGGAGA+CGG + 32559:2878-2897 None:intergenic 50.0%
TGAAGATGGAGAAACGGGTC+GGG - 32559:3046-3065 MS.gene071499:CDS 50.0%
TGCAGAACGAGGTGAAAAGG+AGG - 32559:3499-3518 MS.gene071499:CDS 50.0%
!! GGCGAAGAGGATGATAATGG+CGG + 32559:2769-2788 None:intergenic 50.0%
AACTGGGAGCGACGAGATCA+CGG + 32559:2967-2986 None:intergenic 55.0%
CACGGCAAAGCTCTTGCCAT+CGG + 32559:3351-3370 None:intergenic 55.0%
CCGAGAAGGAGTGAATCCGA+TGG - 32559:3332-3351 MS.gene071499:CDS 55.0%
GACGTGTGCGATCACGTAGA+AGG + 32559:2836-2855 None:intergenic 55.0%
GATGGCAAGAGCTTTGCCGT+GGG - 32559:3350-3369 MS.gene071499:CDS 55.0%
TCTGCGGCACAATCCAACGA+CGG + 32559:3476-3495 None:intergenic 55.0%
TTCCACCACCTGATCCGTCT+TGG + 32559:3003-3022 None:intergenic 55.0%
TTCCTCCAAGACGGATCAGG+TGG - 32559:2995-3014 MS.gene071499:CDS 55.0%
!! ACGAGATCACGGAGGCATCA+AGG + 32559:2956-2975 None:intergenic 55.0%
AAGGTTGACGACGGAGACGG+CGG + 32559:2875-2894 None:intergenic 60.0%
ACGGCGAGTGTCAGTGAAGC+AGG + 32559:2924-2943 None:intergenic 60.0%
ACTGACACTCGCCGTCTCTC+GGG - 32559:2929-2948 MS.gene071499:CDS 60.0%
CACCACCTGATCCGTCTTGG+AGG + 32559:3000-3019 None:intergenic 60.0%
CACTGACACTCGCCGTCTCT+CGG - 32559:2928-2947 MS.gene071499:CDS 60.0%
CGATGGCAAGAGCTTTGCCG+TGG - 32559:3349-3368 MS.gene071499:CDS 60.0%
CGGCGAGTGTCAGTGAAGCA+GGG + 32559:2923-2942 None:intergenic 60.0%
CTCCAAGACGGATCAGGTGG+TGG - 32559:2998-3017 MS.gene071499:CDS 60.0%
GCCGCAGATACTGCAGAACG+AGG - 32559:3488-3507 MS.gene071499:CDS 60.0%
GGCGAGTGTCAGTGAAGCAG+GGG + 32559:2922-2941 None:intergenic 60.0%
GTCAGTGAAGCAGGGGCAGA+CGG + 32559:2915-2934 None:intergenic 60.0%
TCAGTGAAGCAGGGGCAGAC+GGG + 32559:2914-2933 None:intergenic 60.0%
TCCACGGGCGCTCTACAAAG+CGG + 32559:3143-3162 None:intergenic 60.0%
TTGAACCGGCGCAGCTTCCA+CGG + 32559:3159-3178 None:intergenic 60.0%
CTGACACTCGCCGTCTCTCG+GGG - 32559:2930-2949 MS.gene071499:CDS 65.0%
GACGACGGAGACGGCGGTTA+CGG + 32559:2869-2888 None:intergenic 65.0%
GGCATCAAGGCCCCGAGAGA+CGG + 32559:2943-2962 None:intergenic 65.0%
TGAACCGGCGCAGCTTCCAC+GGG + 32559:3158-3177 None:intergenic 65.0%
TGGGAGCGACGAGATCACGG+AGG + 32559:2964-2983 None:intergenic 65.0%
! TCCGCTTTGTAGAGCGCCCG+TGG - 32559:3139-3158 MS.gene071499:CDS 65.0%
GACGGAGACGGCGGTTACGG+CGG + 32559:2866-2885 None:intergenic 70.0%
AGCGCCCGTGGAAGCTGCGC+CGG - 32559:3151-3170 MS.gene071499:CDS 75.0%
GGAGACGGCGGTTACGGCGG+AGG + 32559:2863-2882 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
32559 gene 2759 3532 2759 ID=MS.gene071499
32559 mRNA 2759 3532 2759 ID=MS.gene071499.t1;Parent=MS.gene071499
32559 exon 2759 3532 2759 ID=MS.gene071499.t1.exon1;Parent=MS.gene071499.t1
32559 CDS 2759 3532 2759 ID=cds.MS.gene071499.t1;Parent=MS.gene071499.t1
Gene Sequence

>MS.gene071499

ATGCTAACCGCCATTATCATCCTCTTCGCCGTTATCATAATAATGCTCTGTCTCCATTTCCTAATTCGATACTACCTTCTACGTGATCGCACACGTCAACACCTCCGCCGTAACCGCCGTCTCCGTCGTCAACCTTTCATCTTTTACGTGGACCCGTCTGCCCCTGCTTCACTGACACTCGCCGTCTCTCGGGGCCTTGATGCCTCCGTGATCTCGTCGCTCCCAGTTTTCAAATTTTCCTCCAAGACGGATCAGGTGGTGGAATGCGCCGTTTGTTTATCGGAGTTTGAAGATGGAGAAACGGGTCGGGTTTTACCCAAATGTAATCATAGTTTTCATATTGATTGTATTGATATGTGGTTTCAGTCTCATTCTACATGTCCGCTTTGTAGAGCGCCCGTGGAAGCTGCGCCGGTTCAAGCGACCAGACAAGAAGTGACAATTGATGTGTGTGAACCGGAACTTGTTTTGGGTTCGAGTTCTGGTGATGAAATGAACCGGTCTGAACCGGAATTTTCTTCGTCTTGTTCTAATGAGAAGCAATCTTCATTTGTTGACATTACCATTGAGATTCCGAGAAGGAGTGAATCCGATGGCAAGAGCTTTGCCGTGGGAGAGTCGAGTTGTGATTCACCATCATCTTTTCGGTCGCCAATGAGTCGTGTGTTGTCGTTCACGAGAATCCTTAGCAGAGAAAGGAAACCAAGCATTTCTCCGTCGTTGGATTGTGCCGCAGATACTGCAGAACGAGGTGAAAAGGAGGAGACTCAGTGA
Protein sequence

>MS.gene071499.t1

MLTAIIILFAVIIIMLCLHFLIRYYLLRDRTRQHLRRNRRLRRQPFIFYVDPSAPASLTLAVSRGLDASVISSLPVFKFSSKTDQVVECAVCLSEFEDGETGRVLPKCNHSFHIDCIDMWFQSHSTCPLCRAPVEAAPVQATRQEVTIDVCEPELVLGSSSGDEMNRSEPEFSSSCSNEKQSSFVDITIEIPRRSESDGKSFAVGESSCDSPSSFRSPMSRVLSFTRILSRERKPSISPSLDCAADTAERGEKEETQ