AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene071612

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene071612.t1 MTR_7g108290 98.331 599 9 1 1 598 1 599 0.0 1208
MS.gene071612.t1 MTR_1g088885 76.741 632 133 6 1 629 1 621 0.0 996
MS.gene071612.t1 MTR_4g022330 47.924 578 277 10 30 600 28 588 1.72e-179 523
MS.gene071612.t1 MTR_7g073980 44.034 595 289 11 34 615 31 594 1.36e-162 480
MS.gene071612.t1 MTR_5g016060 40.156 640 317 14 22 629 25 630 7.26e-151 450
MS.gene071612.t1 MTR_4g095430 38.951 629 326 17 25 629 1 595 9.03e-138 415
MS.gene071612.t1 MTR_3g062540 35.533 591 306 12 20 593 7 539 1.20e-116 359
MS.gene071612.t1 MTR_5g016060 37.818 550 277 13 111 629 1 516 1.89e-112 347
MS.gene071612.t1 MTR_3g062540 35.740 554 282 11 56 593 2 497 1.88e-108 337
MS.gene071612.t1 MTR_2g009340 32.137 641 365 11 34 619 42 667 2.35e-107 339
MS.gene071612.t1 MTR_8g078900 35.392 599 312 12 38 575 22 606 4.33e-107 337
MS.gene071612.t1 MTR_2g084595 35.034 588 334 12 34 590 21 591 7.06e-107 336
MS.gene071612.t1 MTR_5g075640 33.773 607 305 11 20 594 8 549 1.12e-106 334
MS.gene071612.t1 MTR_4g093850 33.120 625 347 15 31 602 38 644 7.03e-106 335
MS.gene071612.t1 MTR_8g078900 35.484 589 305 12 48 575 2 576 6.45e-105 331
MS.gene071612.t1 MTR_8g078900 36.364 539 288 10 78 575 42 566 5.86e-100 318
MS.gene071612.t1 MTR_8g090220 33.387 617 308 15 36 604 52 613 5.88e-99 316
MS.gene071612.t1 MTR_1g094850 34.035 570 337 12 38 590 28 575 4.04e-98 313
MS.gene071612.t1 MTR_2g018750 34.570 593 340 14 20 590 9 575 5.61e-97 310
MS.gene071612.t1 MTR_5g075640 33.509 570 283 10 56 594 2 506 1.66e-96 306
MS.gene071612.t1 MTR_8g090220 36.345 498 246 10 36 499 52 512 6.36e-96 304
MS.gene071612.t1 MTR_1g064360 35.294 544 301 12 34 556 24 537 9.33e-96 305
MS.gene071612.t1 MTR_5g032780 37.618 529 275 12 18 506 12 525 5.59e-89 289
MS.gene071612.t1 MTR_2g048390 35.920 451 249 8 26 448 15 453 2.69e-86 277
MS.gene071612.t1 MTR_1g106430 34.451 537 322 11 34 556 26 546 8.28e-86 281
MS.gene071612.t1 MTR_5g015790 36.157 484 265 11 34 498 25 483 1.14e-85 280
MS.gene071612.t1 MTR_4g134210 33.155 561 309 12 27 566 17 532 1.18e-80 266
MS.gene071612.t1 MTR_1g014070 34.105 475 290 9 34 497 25 487 2.58e-80 266
MS.gene071612.t1 MTR_4g093850 33.881 487 258 11 26 462 33 505 3.09e-79 261
MS.gene071612.t1 MTR_8g069330 33.276 583 331 16 39 587 29 587 3.08e-77 257
MS.gene071612.t1 MTR_8g078900 35.011 457 237 8 38 448 22 464 1.79e-76 251
MS.gene071612.t1 MTR_2g084595 33.710 442 250 9 34 448 21 446 1.71e-71 238
MS.gene071612.t1 MTR_8g078900 36.272 397 213 6 78 448 42 424 9.05e-70 233
MS.gene071612.t1 MTR_2g027410 31.959 485 277 10 27 496 17 463 4.18e-66 227
MS.gene071612.t1 MTR_1g082690 27.406 478 286 7 37 503 59 486 1.42e-64 222
MS.gene071612.t1 MTR_4g011530 33.568 426 229 12 204 616 33 417 4.95e-62 213
MS.gene071612.t1 MTR_2g102730 33.105 438 232 10 213 627 24 423 1.25e-58 203
MS.gene071612.t1 MTR_2g027410 31.002 429 243 10 83 496 1 391 4.15e-53 190
MS.gene071612.t1 MTR_4g045767 25.397 567 368 13 45 593 14 543 4.24e-42 160
MS.gene071612.t1 MTR_1g105870 37.900 219 114 4 43 259 38 236 1.22e-41 152
MS.gene071612.t1 MTR_4g074190 26.337 505 289 14 37 499 4 467 7.09e-41 157
MS.gene071612.t1 MTR_4g074190 26.652 454 254 12 84 499 9 421 4.59e-38 148
MS.gene071612.t1 MTR_4g074190 25.052 479 276 14 37 473 4 441 8.68e-32 129
MS.gene071612.t1 MTR_1g035720 27.682 289 148 6 296 575 286 522 1.05e-26 114
MS.gene071612.t1 MTR_2g010890 25.170 441 258 10 102 518 1 393 3.97e-26 112
MS.gene071612.t1 MTR_2g048375 40.580 138 75 3 464 601 1 131 5.48e-21 91.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene071612.t1 AT1G03010 68.837 645 174 9 1 629 1 634 0.0 862
MS.gene071612.t1 AT1G03010 69.055 614 163 9 32 629 5 607 0.0 815
MS.gene071612.t1 AT1G03010 69.055 614 163 9 32 629 31 633 0.0 815
MS.gene071612.t1 AT2G47860 61.231 650 216 12 1 629 1 635 0.0 743
MS.gene071612.t1 AT2G47860 59.138 673 216 13 1 629 1 658 0.0 730
MS.gene071612.t1 AT2G47860 61.205 531 170 11 121 629 1 517 0.0 583
MS.gene071612.t1 AT2G47860 61.205 531 170 11 121 629 1 517 0.0 583
MS.gene071612.t1 AT2G47860 61.269 457 155 7 1 448 1 444 0.0 531
MS.gene071612.t1 AT2G47860 58.333 480 155 8 1 448 1 467 4.24e-180 518
MS.gene071612.t1 AT5G48800 46.540 578 278 8 23 594 28 580 1.78e-174 509
MS.gene071612.t1 AT5G67385 40.129 618 320 13 22 617 10 599 8.08e-141 423
MS.gene071612.t1 AT3G08570 43.038 553 282 11 34 575 32 562 3.20e-140 422
MS.gene071612.t1 AT3G08660 40.842 546 276 11 34 575 32 534 1.11e-133 404
MS.gene071612.t1 AT5G67385 39.347 582 304 12 57 617 1 554 4.33e-126 384
MS.gene071612.t1 AT5G67385 39.347 582 304 12 57 617 1 554 4.33e-126 384
MS.gene071612.t1 AT5G67385 39.347 582 304 12 57 617 1 554 4.33e-126 384
MS.gene071612.t1 AT5G67385 39.347 582 304 12 57 617 1 554 4.33e-126 384
MS.gene071612.t1 AT3G08660 40.232 517 262 11 63 575 1 474 3.63e-121 370
MS.gene071612.t1 AT1G30440 35.434 587 327 12 26 575 15 586 1.53e-111 349
MS.gene071612.t1 AT5G03250 35.593 590 324 13 26 590 15 573 2.33e-106 333
MS.gene071612.t1 AT2G30520 33.445 595 326 13 22 594 15 561 1.44e-105 332
MS.gene071612.t1 AT5G13600 36.538 572 297 16 39 583 29 561 2.85e-101 320
MS.gene071612.t1 AT3G49970 33.786 589 287 15 48 617 6 510 4.46e-98 310
MS.gene071612.t1 AT3G49970 33.786 589 287 15 48 617 6 510 4.46e-98 310
MS.gene071612.t1 AT2G30520 33.036 560 306 12 56 594 2 513 5.82e-95 302
MS.gene071612.t1 AT2G30520 33.036 560 306 12 56 594 2 513 5.82e-95 302
MS.gene071612.t1 AT3G44820 31.940 598 333 11 26 575 12 583 4.44e-94 303
MS.gene071612.t1 AT5G66560 32.039 618 322 9 38 575 21 620 4.33e-92 298
MS.gene071612.t1 AT5G66560 31.908 608 316 9 48 575 2 591 3.11e-90 293
MS.gene071612.t1 AT2G14820 34.375 544 320 13 34 558 25 550 1.07e-89 291
MS.gene071612.t1 AT2G14820 34.375 544 320 13 34 558 25 550 1.07e-89 291
MS.gene071612.t1 AT3G50840 33.333 573 310 10 22 575 2 521 2.82e-88 286
MS.gene071612.t1 AT5G66560 33.582 536 302 7 76 575 64 581 3.77e-88 287
MS.gene071612.t1 AT3G08660 37.915 422 224 9 34 451 32 419 1.89e-87 279
MS.gene071612.t1 AT5G10250 32.184 609 311 16 31 598 44 591 2.60e-87 285
MS.gene071612.t1 AT5G10250 31.886 599 311 15 31 598 44 576 3.04e-84 276
MS.gene071612.t1 AT5G67440 36.059 477 268 10 34 498 25 476 4.01e-84 275
MS.gene071612.t1 AT5G67440 36.059 477 268 10 34 498 25 476 4.01e-84 275
MS.gene071612.t1 AT1G67900 36.276 521 287 11 18 507 12 518 1.25e-83 275
MS.gene071612.t1 AT1G67900 36.276 521 287 11 18 507 12 518 1.25e-83 275
MS.gene071612.t1 AT1G67900 36.276 521 287 11 18 507 12 518 1.25e-83 275
MS.gene071612.t1 AT1G67900 36.276 521 287 11 18 507 12 518 1.25e-83 275
MS.gene071612.t1 AT1G67900 36.276 521 287 11 18 507 12 518 1.25e-83 275
MS.gene071612.t1 AT1G67900 36.276 521 287 11 18 507 12 518 1.25e-83 275
MS.gene071612.t1 AT4G31820 35.404 483 265 11 29 498 20 468 3.76e-82 270
MS.gene071612.t1 AT3G50840 33.086 538 288 10 57 575 1 485 6.85e-80 263
MS.gene071612.t1 AT3G50840 33.086 538 288 10 57 575 1 485 6.85e-80 263
MS.gene071612.t1 AT5G67440 36.304 460 256 10 51 498 5 439 1.05e-79 262
MS.gene071612.t1 AT4G37590 32.165 485 271 11 34 501 25 468 1.94e-77 257
MS.gene071612.t1 AT5G03250 34.350 492 270 11 121 590 1 461 4.15e-77 254
MS.gene071612.t1 AT3G26490 35.441 522 270 14 18 498 12 507 7.16e-76 253
MS.gene071612.t1 AT3G26490 35.441 522 270 14 18 498 12 507 7.16e-76 253
MS.gene071612.t1 AT3G26490 35.441 522 270 14 18 498 12 507 7.16e-76 253
MS.gene071612.t1 AT2G23050 32.454 493 268 12 24 505 19 457 2.39e-74 246
MS.gene071612.t1 AT5G47800 32.700 474 287 9 33 496 23 474 2.82e-74 248
MS.gene071612.t1 AT5G47800 32.700 474 287 9 33 496 23 474 2.82e-74 248
MS.gene071612.t1 AT5G47800 32.700 474 287 9 33 496 23 474 2.82e-74 248
MS.gene071612.t1 AT5G47800 32.700 474 287 9 33 496 136 587 2.91e-73 248
MS.gene071612.t1 AT4G31820 34.076 449 249 11 63 498 1 415 8.33e-68 230
MS.gene071612.t1 AT5G66560 31.590 478 242 8 38 448 21 480 8.38e-64 218
MS.gene071612.t1 AT3G26490 33.617 470 259 13 18 453 12 462 4.60e-58 203
MS.gene071612.t1 AT1G52770 34.430 395 209 7 197 575 17 377 7.00e-58 202
MS.gene071612.t1 AT5G64330 34.384 349 202 8 269 596 371 713 6.62e-52 191
MS.gene071612.t1 AT5G64330 34.677 248 135 3 34 256 50 295 5.68e-41 159
MS.gene071612.t1 AT2G23050 32.564 390 209 10 121 505 1 341 1.29e-50 179
MS.gene071612.t1 AT5G64330 41.224 245 129 4 269 503 312 551 4.69e-49 181
MS.gene071612.t1 AT5G64330 34.061 229 124 3 53 256 10 236 5.47e-35 140
MS.gene071612.t1 AT3G15570 36.913 298 142 5 222 499 38 309 5.41e-49 177
MS.gene071612.t1 AT5G64330 41.224 245 129 4 269 503 371 610 6.69e-49 181
MS.gene071612.t1 AT5G64330 34.553 246 138 2 34 256 50 295 2.37e-41 160
MS.gene071612.t1 AT3G19850 25.202 496 303 9 36 497 3 464 8.48e-49 179
MS.gene071612.t1 AT3G22104 29.032 465 265 11 36 483 4 420 3.44e-45 168
MS.gene071612.t1 AT1G50280 25.000 488 309 10 32 492 3 460 1.44e-44 167
MS.gene071612.t1 AT5G48130 27.096 513 292 14 42 534 45 495 2.53e-44 168
MS.gene071612.t1 AT1G50280 24.943 441 282 8 74 492 14 427 1.06e-42 161
MS.gene071612.t1 AT5G17580 27.368 475 302 9 38 503 22 462 1.59e-39 153
MS.gene071612.t1 AT5G17580 27.789 475 300 10 38 503 7 447 2.51e-39 152
MS.gene071612.t1 AT3G03510 28.673 422 226 12 90 501 8 364 1.72e-38 148
MS.gene071612.t1 AT3G22104 28.133 391 219 8 107 483 3 345 1.36e-34 136
MS.gene071612.t1 AT3G22104 28.133 391 219 8 107 483 3 345 1.36e-34 136
MS.gene071612.t1 AT3G22104 28.133 391 219 8 107 483 3 345 1.36e-34 136

Find 107 sgRNAs with CRISPR-Local

Find 192 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTAGTTTCCTCTTGTTTCT+AGG 0.091654 7.1:-5764674 MS.gene071612:intron
CACCAATCTAAGGGTGTTTC+TGG 0.142169 7.1:+5764213 None:intergenic
GAGAAAATTGTCAAGTAATT+TGG 0.180360 7.1:+5763633 None:intergenic
GAATTGAAGCCTAGTGTTTC+AGG 0.216646 7.1:-5766271 MS.gene071612:CDS
TTTCTAGGAGTGGAAGATTT+AGG 0.247375 7.1:-5764659 MS.gene071612:CDS
TTCTTTACTACGAACAAATA+AGG 0.259310 7.1:-5763033 MS.gene071612:CDS
AGAATTCTCAGAAAAGAATT+TGG 0.264671 7.1:-5764460 MS.gene071612:CDS
AGAGTTGATCAGCAAAATTT+TGG 0.272364 7.1:-5764112 MS.gene071612:CDS
AACTTCTTGTAGAAGTGATT+TGG 0.280903 7.1:-5763902 MS.gene071612:CDS
ATCTTGTTTGGTGGTATTCA+TGG 0.287931 7.1:-5762977 MS.gene071612:CDS
AAGATATCAACCTTGTTAAT+AGG 0.326340 7.1:-5764338 MS.gene071612:CDS
ATTTACCTTGTGAAGTGAAT+AGG 0.350440 7.1:+5765195 None:intergenic
AGAGTTTCCCCACCAATCTA+AGG 0.353136 7.1:+5764203 None:intergenic
GAGAATGAGGTTGAATGATT+TGG 0.354022 7.1:-5762840 MS.gene071612:CDS
AGTATTCGTGGCAGTGGAAC+TGG 0.358592 7.1:-5762704 MS.gene071612:CDS
AGCTGTTGACATCTTCCTTA+AGG 0.360096 7.1:-5763509 MS.gene071612:intron
TTAAGAATTGAGCTTTGCTT+TGG 0.368579 7.1:+5763661 None:intergenic
TTCTAAAACATTATCAATGA+TGG 0.372684 7.1:-5764238 MS.gene071612:CDS
TGTATAATGTTCGATGTGTT+TGG 0.373596 7.1:+5764399 None:intergenic
CAAAGATCAGGGAGTGGTAT+AGG 0.379986 7.1:-5762944 MS.gene071612:CDS
GGACACAATCAAATCTTGTT+TGG 0.395537 7.1:-5762989 MS.gene071612:CDS
AAACATGAAAGAAATGCTAT+TGG 0.398126 7.1:+5763955 None:intergenic
TTTCTTCGAACGAGTTATAT+CGG 0.401205 7.1:-5764160 MS.gene071612:CDS
ATAGGTTCATCCGAACATTA+AGG 0.402802 7.1:-5763167 MS.gene071612:intron
GAAAGGCTACCAGTTCAAAT+AGG 0.406258 7.1:-5763064 MS.gene071612:CDS
TGCAAAGAGCAACTAACTTC+TGG 0.410485 7.1:-5764288 MS.gene071612:CDS
GGTCAATTTCCTCAAAGATC+AGG 0.415797 7.1:-5762956 MS.gene071612:CDS
AAAGCAAAGCTCAATTCTTA+AGG 0.417656 7.1:-5763659 MS.gene071612:CDS
GAGCTTTGCTTTGGAGATCC+AGG 0.425100 7.1:+5763670 None:intergenic
AGGTTGATATCTTCTGATAA+AGG 0.430627 7.1:+5764348 None:intergenic
AGCACTTGCAGAACTACTTC+CGG 0.434035 7.1:-5763566 MS.gene071612:CDS
ATACCACTCCCTGATCTTTG+AGG 0.435450 7.1:+5762947 None:intergenic
TATGCACATAATTCTCTTCA+AGG 0.435685 7.1:-5764084 MS.gene071612:CDS
TCACTGGAGACATCAGATAT+TGG 0.444897 7.1:+5765244 None:intergenic
GCTTACTACCAACTCAATCT+AGG 0.447056 7.1:-5763990 MS.gene071612:CDS
GTATAATGTTCGATGTGTTT+GGG 0.449390 7.1:+5764400 None:intergenic
ACTTGTACACCTATTTGAAC+TGG 0.460924 7.1:+5763055 None:intergenic
CGCTCCGAGTCCTTAATGTT+CGG 0.462622 7.1:+5763157 None:intergenic
TTCCGTATTCACAGTATTCG+TGG 0.463092 7.1:-5762716 MS.gene071612:CDS
AGGCTTCGAAATGCGATGAA+TGG 0.467453 7.1:-5763013 MS.gene071612:CDS
TTTCCTCTTGTTTCTAGGAG+TGG 0.473410 7.1:-5764669 MS.gene071612:CDS
TCAGGGAGTGGTATAGGAAG+TGG 0.474984 7.1:-5762938 MS.gene071612:CDS
AGCCTAGTGTTTCAGGAAGA+AGG 0.476944 7.1:-5766264 MS.gene071612:CDS
GGAAACCGGGACCGTGGTTG+TGG 0.476979 7.1:+5762671 None:intergenic
TGCCACGAATACTGTGAATA+CGG 0.478137 7.1:+5762714 None:intergenic
CTTGTAACGCGAGCATGATC+CGG 0.480182 7.1:+5763547 None:intergenic
GATCGGTTTACAACTCGATC+AGG 0.481839 7.1:-5763872 MS.gene071612:CDS
GTAAGTCTTCCGACCGTGCC+AGG 0.485055 7.1:-5764597 MS.gene071612:CDS
TACTTGGATGGTAAGATCAC+TGG 0.486316 7.1:+5765228 None:intergenic
TCTTCTGCAATTCAATGTCA+AGG 0.497562 7.1:+5764043 None:intergenic
AAGAGCTGAATCATATCTAA+AGG 0.501938 7.1:-5764433 MS.gene071612:CDS
AATAGGTTGATGCTCCTACT+TGG 0.504109 7.1:+5765212 None:intergenic
AACCAGAAACACCCTTAGAT+TGG 0.511015 7.1:-5764215 MS.gene071612:CDS
CTTCTGCAATTCAATGTCAA+GGG 0.515528 7.1:+5764044 None:intergenic
AAACACATCGAACATTATAC+AGG 0.516060 7.1:-5764397 MS.gene071612:CDS
AAAATGGGAGTTGTAACTCT+TGG 0.524005 7.1:-5766295 MS.gene071612:CDS
CACAATCAAATCTTGTTTGG+TGG 0.524281 7.1:-5762986 MS.gene071612:CDS
ATAGCTGCAAAATTCTGCTA+TGG 0.525366 7.1:-5764555 MS.gene071612:CDS
GAGTATGAATTTGACAGTCC+TGG 0.526590 7.1:-5763688 MS.gene071612:CDS
GCATGTCTTATGCTTGAACT+TGG 0.528359 7.1:+5766232 None:intergenic
TGAATCATATCTAAAGGAAA+CGG 0.538877 7.1:-5764427 MS.gene071612:CDS
GCATAAGACATGCCACTGAA+TGG 0.541068 7.1:-5766222 MS.gene071612:intron
CATTGATTAGCCTATTAACA+AGG 0.548783 7.1:+5764328 None:intergenic
ATTCACAGTATTCGTGGCAG+TGG 0.549968 7.1:-5762710 MS.gene071612:CDS
TGCATCTACACCACCTGGCA+CGG 0.550474 7.1:+5764584 None:intergenic
TCATCCGAACATTAAGGACT+CGG 0.556784 7.1:-5763161 MS.gene071612:CDS
GTCAATTTCCTCAAAGATCA+GGG 0.559074 7.1:-5762955 MS.gene071612:CDS
AGAAACACCCTTAGATTGGT+GGG 0.561564 7.1:-5764211 MS.gene071612:CDS
GCCATGCCGCACAAAATGAA+AGG 0.570379 7.1:-5763081 MS.gene071612:CDS
ACCGATGCATAGTTATCTCT+AGG 0.575158 7.1:+5762905 None:intergenic
GATTTGAAGAATTTGCGTGC+AGG 0.575709 7.1:+5762773 None:intergenic
TTGAATTGCAGAAGAAACAA+AGG 0.576448 7.1:-5764035 MS.gene071612:CDS
CTAGTCCACAACCACGGTCC+CGG 0.580906 7.1:-5762676 MS.gene071612:CDS
TCCTAGAGATAACTATGCAT+CGG 0.582662 7.1:-5762906 MS.gene071612:CDS
AAGTAACAAGAATGAGAATG+AGG 0.586252 7.1:-5762853 MS.gene071612:CDS
CAGAAACACCCTTAGATTGG+TGG 0.586270 7.1:-5764212 MS.gene071612:CDS
GGTTGATGCTCCTACTTGGA+TGG 0.586634 7.1:+5765216 None:intergenic
CTTGTAGAAGTGATTTGGAG+AGG 0.587525 7.1:-5763897 MS.gene071612:CDS
TGAATTGCAGAAGAAACAAA+GGG 0.588131 7.1:-5764034 MS.gene071612:CDS
GCACTCGAAGGTGAATTCGT+TGG 0.590719 7.1:+5763826 None:intergenic
AGTGATTTGGAGAGGCGGAT+CGG 0.592594 7.1:-5763889 MS.gene071612:CDS
TCTACACCACCTGGCACGGT+CGG 0.595705 7.1:+5764588 None:intergenic
CTTCCACTCCTAGAAACAAG+AGG 0.596628 7.1:+5764666 None:intergenic
GAGTTTCCCCACCAATCTAA+GGG 0.605139 7.1:+5764204 None:intergenic
ATATCGGTTATGAAATCGAA+GGG 0.606291 7.1:-5764144 MS.gene071612:CDS
AGTGATCTTACCATCCAAGT+AGG 0.606850 7.1:-5765226 MS.gene071612:CDS
CTTCGAAATGCGATGAATGG+AGG 0.608119 7.1:-5763010 MS.gene071612:CDS
GTCCTTCTTCCTGAAACACT+AGG 0.612878 7.1:+5766262 None:intergenic
ATGCACATAATTCTCTTCAA+GGG 0.619987 7.1:-5764083 MS.gene071612:CDS
TGAAAAGGAAACCGGGACCG+TGG 0.620189 7.1:+5762665 None:intergenic
TCAAATGCATCTACACCACC+TGG 0.627222 7.1:+5764579 None:intergenic
TATATCGGTTATGAAATCGA+AGG 0.631995 7.1:-5764145 MS.gene071612:CDS
ATCAACCTATTCACTTCACA+AGG 0.635818 7.1:-5765200 MS.gene071612:intron
TAGCATAGCAATATTCGAGA+GGG 0.638972 7.1:+5764515 None:intergenic
TTTCCTCAAAGATCAGGGAG+TGG 0.639154 7.1:-5762950 MS.gene071612:CDS
AAAATTATAATACCATTCAG+TGG 0.645788 7.1:+5766210 None:intergenic
GAAACACCCTTAGATTGGTG+GGG 0.662827 7.1:-5764210 MS.gene071612:CDS
GTAGAAGTGATTTGGAGAGG+CGG 0.668323 7.1:-5763894 MS.gene071612:CDS
ATAGCATAGCAATATTCGAG+AGG 0.677800 7.1:+5764514 None:intergenic
AGTCTTCCGACCGTGCCAGG+TGG 0.688935 7.1:-5764594 MS.gene071612:CDS
CATGCTCGCGTTACAAGCGA+CGG 0.689890 7.1:-5763541 MS.gene071612:CDS
TTCGTGGCAGTGGAACTGGA+AGG 0.695731 7.1:-5762700 MS.gene071612:CDS
ATTCTGCTATGGAATCAATG+TGG 0.703925 7.1:-5764544 MS.gene071612:CDS
ACTATAGTCATGAAACTGAG+TGG 0.715336 7.1:+5762630 None:intergenic
ATTGTGTTGTGAGCACTCGA+AGG 0.726239 7.1:+5763814 None:intergenic
GAAGGTCTAGTCCACAACCA+CGG 0.728361 7.1:-5762682 MS.gene071612:CDS
ACGGTCGGAAGACTTACGCG+CGG 0.751124 7.1:+5764603 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAGTATGATAATAATTGA+TGG + chr7.1:5763257-5763276 None:intergenic 15.0%
!! ATAATTATAACATATCAGAA+TGG + chr7.1:5763772-5763791 None:intergenic 15.0%
!! TTATAATTATACATTCAACA+TGG - chr7.1:5763782-5763801 MS.gene071612:CDS 15.0%
!!! AATATTATTTTCTAACGTTA+TGG + chr7.1:5765546-5765565 None:intergenic 15.0%
!!! ACTTTTTTCTTTTTTTTTGA+AGG - chr7.1:5762748-5762767 MS.gene071612:CDS 15.0%
!!! ATATTATTTTCTAACGTTAT+GGG + chr7.1:5765545-5765564 None:intergenic 15.0%
!!! CTGTATCAAAATAATATTTT+AGG + chr7.1:5763446-5763465 None:intergenic 15.0%
!!! TCAAAATAATATTTTAGGAA+TGG + chr7.1:5763441-5763460 None:intergenic 15.0%
!!! TTTAAAACCTTTTATACTAA+CGG + chr7.1:5763931-5763950 None:intergenic 15.0%
!!! TTTTTTATGTATGCAATAAA+TGG + chr7.1:5763527-5763546 None:intergenic 15.0%
!! AAAATTATAATACCATTCAG+TGG + chr7.1:5762722-5762741 None:intergenic 20.0%
!! TAATTAATGACTGAAATTGT+TGG - chr7.1:5765727-5765746 MS.gene071612:intron 20.0%
!! TGATAACATACTATATAAGA+TGG + chr7.1:5764098-5764117 None:intergenic 20.0%
!!! ATCATTGATAATGTTTTAGA+AGG + chr7.1:5764692-5764711 None:intergenic 20.0%
!!! ATGATATAGATTCAATTTTG+AGG - chr7.1:5765140-5765159 MS.gene071612:intron 20.0%
!!! TCTCTGAAAATTTCAATTTT+TGG - chr7.1:5763578-5763597 MS.gene071612:CDS 20.0%
!!! TGTTGGTTTATTTATCATAT+AGG - chr7.1:5765744-5765763 MS.gene071612:intron 20.0%
!!! TTAATAGTGTTTTCAATAGA+AGG + chr7.1:5765466-5765485 None:intergenic 20.0%
!!! TTCTAAAACATTATCAATGA+TGG - chr7.1:5764691-5764710 MS.gene071612:intron 20.0%
! AAACATGAAAGAAATGCTAT+TGG + chr7.1:5764977-5764996 None:intergenic 25.0%
! AACCCATTAATGCAAATAAT+TGG + chr7.1:5763401-5763420 None:intergenic 25.0%
! AAGATATCAACCTTGTTAAT+AGG - chr7.1:5764591-5764610 MS.gene071612:CDS 25.0%
! AATTTCATGAAATCTTGAAG+TGG + chr7.1:5762871-5762890 None:intergenic 25.0%
! ACTCCAATTATTTGCATTAA+TGG - chr7.1:5763395-5763414 MS.gene071612:intron 25.0%
! AGAATTCTCAGAAAAGAATT+TGG - chr7.1:5764469-5764488 MS.gene071612:CDS 25.0%
! ATTAGTTCATCAACCATAAT+AGG + chr7.1:5763000-5763019 None:intergenic 25.0%
! CTCCAATTATTTGCATTAAT+GGG - chr7.1:5763396-5763415 MS.gene071612:intron 25.0%
! GAGAAAATTGTCAAGTAATT+TGG + chr7.1:5765299-5765318 None:intergenic 25.0%
! TGAATCATATCTAAAGGAAA+CGG - chr7.1:5764502-5764521 MS.gene071612:CDS 25.0%
! TTCTTTACTACGAACAAATA+AGG - chr7.1:5765896-5765915 MS.gene071612:intron 25.0%
! TTGCATTTCCAAATTCATTT+AGG + chr7.1:5763294-5763313 None:intergenic 25.0%
!! AAACTTAAGTAACCATTTTG+AGG - chr7.1:5763472-5763491 MS.gene071612:intron 25.0%
!! ATCTTAATTTTCCAATCTCA+AGG + chr7.1:5763126-5763145 None:intergenic 25.0%
!!! CATACTATTGTTTTAGCTTT+TGG - chr7.1:5763268-5763287 MS.gene071612:intron 25.0%
!!! CTTTTCTACTTTTCTGAATT+TGG - chr7.1:5765165-5765184 MS.gene071612:intron 25.0%
!!! TTGCTTTGATTTGTAAAGAA+AGG - chr7.1:5765697-5765716 MS.gene071612:intron 25.0%
AAACACATCGAACATTATAC+AGG - chr7.1:5764532-5764551 MS.gene071612:CDS 30.0%
AAAGCAAAGCTCAATTCTTA+AGG - chr7.1:5765270-5765289 MS.gene071612:intron 30.0%
AACTTCTTGTAGAAGTGATT+TGG - chr7.1:5765027-5765046 MS.gene071612:intron 30.0%
AAGAGCTGAATCATATCTAA+AGG - chr7.1:5764496-5764515 MS.gene071612:CDS 30.0%
AAGTAACAAGAATGAGAATG+AGG - chr7.1:5766076-5766095 MS.gene071612:intron 30.0%
ATAGCAAAACTACATTTGAC+AGG + chr7.1:5764133-5764152 None:intergenic 30.0%
ATCATGTCATTGTTTGGTAA+AGG + chr7.1:5763172-5763191 None:intergenic 30.0%
ATGCACATAATTCTCTTCAA+GGG - chr7.1:5764846-5764865 MS.gene071612:intron 30.0%
ATGGTGCAATAATAAGACAT+TGG + chr7.1:5763508-5763527 None:intergenic 30.0%
ATTTACCTTGTGAAGTGAAT+AGG + chr7.1:5763737-5763756 None:intergenic 30.0%
CCAAAAAAATTGTCCATTGT+CGG + chr7.1:5763323-5763342 None:intergenic 30.0%
CTACGTGTATATAATGATTC+AGG - chr7.1:5763643-5763662 MS.gene071612:CDS 30.0%
GACATGAAAATTTCAAAGCA+TGG + chr7.1:5763624-5763643 None:intergenic 30.0%
GTATAATGTTCGATGTGTTT+GGG + chr7.1:5764532-5764551 None:intergenic 30.0%
TATGCACATAATTCTCTTCA+AGG - chr7.1:5764845-5764864 MS.gene071612:intron 30.0%
TGAATTGCAGAAGAAACAAA+GGG - chr7.1:5764895-5764914 MS.gene071612:intron 30.0%
TGATACACCGTTAGTATAAA+AGG - chr7.1:5763921-5763940 MS.gene071612:CDS 30.0%
TGTATAATGTTCGATGTGTT+TGG + chr7.1:5764533-5764552 None:intergenic 30.0%
TTAAGAATTGAGCTTTGCTT+TGG + chr7.1:5765271-5765290 None:intergenic 30.0%
TTGAATTGCAGAAGAAACAA+AGG - chr7.1:5764894-5764913 MS.gene071612:intron 30.0%
TTTCATATAGCTAACAGATG+AGG + chr7.1:5763217-5763236 None:intergenic 30.0%
TTTCTTCGAACGAGTTATAT+CGG - chr7.1:5764769-5764788 MS.gene071612:intron 30.0%
! AAGGAACAAGATTTTCACAA+TGG + chr7.1:5764565-5764584 None:intergenic 30.0%
! ATATCGGTTATGAAATCGAA+GGG - chr7.1:5764785-5764804 MS.gene071612:intron 30.0%
! CATGTTTCTGAATAACTTCT+AGG + chr7.1:5762816-5762835 None:intergenic 30.0%
! GAATGGCTATTTCAATATAG+TGG + chr7.1:5763424-5763443 None:intergenic 30.0%
! TATATCGGTTATGAAATCGA+AGG - chr7.1:5764784-5764803 MS.gene071612:intron 30.0%
!! AATCAATTGTTTTGCTTAGG+CGG + chr7.1:5765801-5765820 None:intergenic 30.0%
!! AGAGTTGATCAGCAAAATTT+TGG - chr7.1:5764817-5764836 MS.gene071612:intron 30.0%
!! AGGTTGATATCTTCTGATAA+AGG + chr7.1:5764584-5764603 None:intergenic 30.0%
!! CATTGATTAGCCTATTAACA+AGG + chr7.1:5764604-5764623 None:intergenic 30.0%
!! GACAATCAATTGTTTTGCTT+AGG + chr7.1:5765804-5765823 None:intergenic 30.0%
!! TTCTCTTTTGAAAAGGAAAC+CGG + chr7.1:5766275-5766294 None:intergenic 30.0%
!!! GATTTTGAGTTCTAACCTTA+AGG + chr7.1:5765438-5765457 None:intergenic 30.0%
ACGAAATACCAACACAAACA+CGG - chr7.1:5763025-5763044 MS.gene071612:CDS 35.0%
ACTTGTACACCTATTTGAAC+TGG + chr7.1:5765877-5765896 None:intergenic 35.0%
ATAGCATAGCAATATTCGAG+AGG + chr7.1:5764418-5764437 None:intergenic 35.0%
ATAGCTGCAAAATTCTGCTA+TGG - chr7.1:5764374-5764393 MS.gene071612:CDS 35.0%
ATAGGTTCATCCGAACATTA+AGG - chr7.1:5765762-5765781 MS.gene071612:intron 35.0%
ATCAACCTATTCACTTCACA+AGG - chr7.1:5763729-5763748 MS.gene071612:CDS 35.0%
ATTCTGCTATGGAATCAATG+TGG - chr7.1:5764385-5764404 MS.gene071612:CDS 35.0%
CAACCATAATAGGATCTGAA+GGG + chr7.1:5762990-5763009 None:intergenic 35.0%
CTAGAAACAAGAGGAAACTA+GGG + chr7.1:5764257-5764276 None:intergenic 35.0%
CTTCTGCAATTCAATGTCAA+GGG + chr7.1:5764888-5764907 None:intergenic 35.0%
GAAAATTTCAAAGCATGGCA+AGG + chr7.1:5763619-5763638 None:intergenic 35.0%
GAGAATGAGGTTGAATGATT+TGG - chr7.1:5766089-5766108 MS.gene071612:intron 35.0%
GGACACAATCAAATCTTGTT+TGG - chr7.1:5765940-5765959 MS.gene071612:intron 35.0%
GGATAAGAATAGCCTCAAAA+TGG + chr7.1:5763487-5763506 None:intergenic 35.0%
GTCAATTTCCTCAAAGATCA+GGG - chr7.1:5765974-5765993 MS.gene071612:intron 35.0%
TAGCATAGCAATATTCGAGA+GGG + chr7.1:5764417-5764436 None:intergenic 35.0%
TCAACCATAATAGGATCTGA+AGG + chr7.1:5762991-5763010 None:intergenic 35.0%
TCCTAGAGATAACTATGCAT+CGG - chr7.1:5766023-5766042 MS.gene071612:intron 35.0%
TCTTCTGCAATTCAATGTCA+AGG + chr7.1:5764889-5764908 None:intergenic 35.0%
TTTGGTAAAGGACTACATCA+AGG + chr7.1:5763160-5763179 None:intergenic 35.0%
! ACATGATGCTCGATTTTGAA+TGG - chr7.1:5763185-5763204 MS.gene071612:intron 35.0%
! ACATTCAACATGGTTTTCTC+TGG - chr7.1:5763792-5763811 MS.gene071612:CDS 35.0%
! ATCTTGTTTGGTGGTATTCA+TGG - chr7.1:5765952-5765971 MS.gene071612:intron 35.0%
! CACAATCAAATCTTGTTTGG+TGG - chr7.1:5765943-5765962 MS.gene071612:intron 35.0%
! GCAAGTGCTATGAATTTTGA+TGG + chr7.1:5765352-5765371 None:intergenic 35.0%
! GCTTTTGGCCTAAATGAATT+TGG - chr7.1:5763283-5763302 MS.gene071612:intron 35.0%
! GGTTTCCTTTTCAAAAGAGA+AGG - chr7.1:5766274-5766293 MS.gene071612:CDS 35.0%
! GTCTTATTGAGTTCGAGTTT+GGG - chr7.1:5762918-5762937 MS.gene071612:CDS 35.0%
! TACTTTTCTGAATTTGGACG+AGG - chr7.1:5765171-5765190 MS.gene071612:intron 35.0%
! TCTGGTTTACATTCCAAGTT+AGG - chr7.1:5763810-5763829 MS.gene071612:CDS 35.0%
! TCTTATTGAGTTCGAGTTTG+GGG - chr7.1:5762919-5762938 MS.gene071612:CDS 35.0%
! TGTTTGTGTTGGTATTTCGT+AGG + chr7.1:5763025-5763044 None:intergenic 35.0%
! TTTCTAGGAGTGGAAGATTT+AGG - chr7.1:5764270-5764289 MS.gene071612:CDS 35.0%
!! AGTCTTATTGAGTTCGAGTT+TGG - chr7.1:5762917-5762936 MS.gene071612:CDS 35.0%
!! TCTCTTTTGAAAAGGAAACC+GGG + chr7.1:5766274-5766293 None:intergenic 35.0%
!!! CCGACAATGGACAATTTTTT+TGG - chr7.1:5763320-5763339 MS.gene071612:intron 35.0%
AACCAGAAACACCCTTAGAT+TGG - chr7.1:5764714-5764733 MS.gene071612:intron 40.0%
ACCGATGCATAGTTATCTCT+AGG + chr7.1:5766027-5766046 None:intergenic 40.0%
AGAAACACCCTTAGATTGGT+GGG - chr7.1:5764718-5764737 MS.gene071612:intron 40.0%
AGCTGTTGACATCTTCCTTA+AGG - chr7.1:5765420-5765439 MS.gene071612:intron 40.0%
AGTGATCTTACCATCCAAGT+AGG - chr7.1:5763703-5763722 MS.gene071612:CDS 40.0%
ATCAATGTCCGTGTTTGTGT+TGG + chr7.1:5763036-5763055 None:intergenic 40.0%
CCTAGAAACAAGAGGAAACT+AGG + chr7.1:5764258-5764277 None:intergenic 40.0%
CTATTCATTGCCACCTAACT+TGG + chr7.1:5763826-5763845 None:intergenic 40.0%
GAAAGGCTACCAGTTCAAAT+AGG - chr7.1:5765865-5765884 MS.gene071612:intron 40.0%
GAATTGAAGCCTAGTGTTTC+AGG - chr7.1:5762658-5762677 MS.gene071612:CDS 40.0%
GAGTATGAATTTGACAGTCC+TGG - chr7.1:5765241-5765260 MS.gene071612:CDS 40.0%
GATTTGAAGAATTTGCGTGC+AGG + chr7.1:5766159-5766178 None:intergenic 40.0%
GCATGTCTTATGCTTGAACT+TGG + chr7.1:5762700-5762719 None:intergenic 40.0%
GCTTACTACCAACTCAATCT+AGG - chr7.1:5764939-5764958 MS.gene071612:intron 40.0%
GGTCAATTTCCTCAAAGATC+AGG - chr7.1:5765973-5765992 MS.gene071612:intron 40.0%
GGTTTACATTCCAAGTTAGG+TGG - chr7.1:5763813-5763832 MS.gene071612:CDS 40.0%
GTTAGGTGGCAATGAATAGT+TGG - chr7.1:5763827-5763846 MS.gene071612:CDS 40.0%
GTTATTGGACACCTTGAGAT+TGG - chr7.1:5763112-5763131 MS.gene071612:CDS 40.0%
TACTTGGATGGTAAGATCAC+TGG + chr7.1:5763704-5763723 None:intergenic 40.0%
TCACTGGAGACATCAGATAT+TGG + chr7.1:5763688-5763707 None:intergenic 40.0%
TCATCCGAACATTAAGGACT+CGG - chr7.1:5765768-5765787 MS.gene071612:intron 40.0%
TCGAGCATCATGTCATTGTT+TGG + chr7.1:5763178-5763197 None:intergenic 40.0%
TGCAAAGAGCAACTAACTTC+TGG - chr7.1:5764641-5764660 MS.gene071612:CDS 40.0%
TGCCACGAATACTGTGAATA+CGG + chr7.1:5766218-5766237 None:intergenic 40.0%
TTCCGTATTCACAGTATTCG+TGG - chr7.1:5766213-5766232 MS.gene071612:intron 40.0%
! CCAAGAGCTCAAAAGCATAA+TGG + chr7.1:5764167-5764186 None:intergenic 40.0%
! CCATTATGCTTTTGAGCTCT+TGG - chr7.1:5764164-5764183 MS.gene071612:CDS 40.0%
! CCTAGTTTCCTCTTGTTTCT+AGG - chr7.1:5764255-5764274 MS.gene071612:CDS 40.0%
! CTTATTGAGTTCGAGTTTGG+GGG - chr7.1:5762920-5762939 MS.gene071612:CDS 40.0%
! CTTGTAGAAGTGATTTGGAG+AGG - chr7.1:5765032-5765051 MS.gene071612:intron 40.0%
! GAGCTTTTCCTAGATTGAGT+TGG + chr7.1:5764950-5764969 None:intergenic 40.0%
! TGGTAGCCTTTCATTTTGTG+CGG + chr7.1:5765857-5765876 None:intergenic 40.0%
! TGTTAGTGTCGTGTCGTTAT+TGG - chr7.1:5763097-5763116 MS.gene071612:CDS 40.0%
! TTATGCTTTTGAGCTCTTGG+TGG - chr7.1:5764167-5764186 MS.gene071612:CDS 40.0%
! TTTTCTGAATTTGGACGAGG+TGG - chr7.1:5765174-5765193 MS.gene071612:intron 40.0%
!! AATAGGTTGATGCTCCTACT+TGG + chr7.1:5763720-5763739 None:intergenic 40.0%
!! TGGCACCTTCTCTTTTGAAA+AGG + chr7.1:5766282-5766301 None:intergenic 40.0%
!! TTTCCTCTTGTTTCTAGGAG+TGG - chr7.1:5764260-5764279 MS.gene071612:CDS 40.0%
!!! CAGGAAGAGTCTTTTTTTGC+AGG - chr7.1:5763662-5763681 MS.gene071612:CDS 40.0%
AATGCAAAGCTCACCGACAA+TGG - chr7.1:5763307-5763326 MS.gene071612:intron 45.0%
AGAGTTGAATCAGTGTGTCG+CGG + chr7.1:5765675-5765694 None:intergenic 45.0%
AGAGTTTCCCCACCAATCTA+AGG + chr7.1:5764729-5764748 None:intergenic 45.0%
AGCACTTGCAGAACTACTTC+CGG - chr7.1:5765363-5765382 MS.gene071612:intron 45.0%
AGCCTAGTGTTTCAGGAAGA+AGG - chr7.1:5762665-5762684 MS.gene071612:CDS 45.0%
AGGCTTCGAAATGCGATGAA+TGG - chr7.1:5765916-5765935 MS.gene071612:intron 45.0%
ATACCACTCCCTGATCTTTG+AGG + chr7.1:5765985-5766004 None:intergenic 45.0%
ATTCACAGTATTCGTGGCAG+TGG - chr7.1:5766219-5766238 MS.gene071612:intron 45.0%
ATTGGAGTTTCACGCTAGCA+TGG + chr7.1:5763383-5763402 None:intergenic 45.0%
ATTGTGTTGTGAGCACTCGA+AGG + chr7.1:5765118-5765137 None:intergenic 45.0%
CAAAGATCAGGGAGTGGTAT+AGG - chr7.1:5765985-5766004 MS.gene071612:intron 45.0%
CAGAAACACCCTTAGATTGG+TGG - chr7.1:5764717-5764736 MS.gene071612:intron 45.0%
CCATAATAGGATCTGAAGGG+AGG + chr7.1:5762987-5763006 None:intergenic 45.0%
CCTCCCTTCAGATCCTATTA+TGG - chr7.1:5762984-5763003 MS.gene071612:CDS 45.0%
CTTCCACTCCTAGAAACAAG+AGG + chr7.1:5764266-5764285 None:intergenic 45.0%
CTTCGAAATGCGATGAATGG+AGG - chr7.1:5765919-5765938 MS.gene071612:intron 45.0%
GAAACACCCTTAGATTGGTG+GGG - chr7.1:5764719-5764738 MS.gene071612:intron 45.0%
GAGTTTCCCCACCAATCTAA+GGG + chr7.1:5764728-5764747 None:intergenic 45.0%
GCATAAGACATGCCACTGAA+TGG - chr7.1:5762707-5762726 MS.gene071612:CDS 45.0%
GTCCTTCTTCCTGAAACACT+AGG + chr7.1:5762670-5762689 None:intergenic 45.0%
TCAAATGCATCTACACCACC+TGG + chr7.1:5764353-5764372 None:intergenic 45.0%
TTTCCTCAAAGATCAGGGAG+TGG - chr7.1:5765979-5765998 MS.gene071612:intron 45.0%
! GATCGGTTTACAACTCGATC+AGG - chr7.1:5765057-5765076 MS.gene071612:intron 45.0%
! GTAGAAGTGATTTGGAGAGG+CGG - chr7.1:5765035-5765054 MS.gene071612:intron 45.0%
!! CACCAATCTAAGGGTGTTTC+TGG + chr7.1:5764719-5764738 None:intergenic 45.0%
AGTATTCGTGGCAGTGGAAC+TGG - chr7.1:5766225-5766244 MS.gene071612:CDS 50.0%
CGCTCCGAGTCCTTAATGTT+CGG + chr7.1:5765775-5765794 None:intergenic 50.0%
CTTGTAACGCGAGCATGATC+CGG + chr7.1:5765385-5765404 None:intergenic 50.0%
GAAGGTCTAGTCCACAACCA+CGG - chr7.1:5766247-5766266 MS.gene071612:CDS 50.0%
GCACTCGAAGGTGAATTCGT+TGG + chr7.1:5765106-5765125 None:intergenic 50.0%
GCCATGCCGCACAAAATGAA+AGG - chr7.1:5765848-5765867 MS.gene071612:intron 50.0%
TCAGGGAGTGGTATAGGAAG+TGG - chr7.1:5765991-5766010 MS.gene071612:intron 50.0%
! AGTGATTTGGAGAGGCGGAT+CGG - chr7.1:5765040-5765059 MS.gene071612:intron 50.0%
! GCCTTTCATTTTGTGCGGCA+TGG + chr7.1:5765852-5765871 None:intergenic 50.0%
! GGTTGATGCTCCTACTTGGA+TGG + chr7.1:5763716-5763735 None:intergenic 50.0%
!! GAGCTTTGCTTTGGAGATCC+AGG + chr7.1:5765262-5765281 None:intergenic 50.0%
CATGCTCGCGTTACAAGCGA+CGG - chr7.1:5765388-5765407 MS.gene071612:intron 55.0%
TGAAAAGGAAACCGGGACCG+TGG + chr7.1:5766267-5766286 None:intergenic 55.0%
TGCATCTACACCACCTGGCA+CGG + chr7.1:5764348-5764367 None:intergenic 55.0%
TTCGTGGCAGTGGAACTGGA+AGG - chr7.1:5766229-5766248 MS.gene071612:CDS 55.0%
ACGGTCGGAAGACTTACGCG+CGG + chr7.1:5764329-5764348 None:intergenic 60.0%
ATCAGTGTGTCGCGGCAGCA+AGG + chr7.1:5765667-5765686 None:intergenic 60.0%
CTAGTCCACAACCACGGTCC+CGG - chr7.1:5766253-5766272 MS.gene071612:CDS 60.0%
GTAAGTCTTCCGACCGTGCC+AGG - chr7.1:5764332-5764351 MS.gene071612:CDS 60.0%
TCTACACCACCTGGCACGGT+CGG + chr7.1:5764344-5764363 None:intergenic 60.0%
AGTCTTCCGACCGTGCCAGG+TGG - chr7.1:5764335-5764354 MS.gene071612:CDS 65.0%
GGAAACCGGGACCGTGGTTG+TGG + chr7.1:5766261-5766280 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 5762637 5766314 5762637 ID=MS.gene071612
chr7.1 mRNA 5762637 5766314 5762637 ID=MS.gene071612.t1;Parent=MS.gene071612
chr7.1 exon 5766223 5766314 5766223 ID=MS.gene071612.t1.exon1;Parent=MS.gene071612.t1
chr7.1 CDS 5766223 5766314 5766223 ID=cds.MS.gene071612.t1;Parent=MS.gene071612.t1
chr7.1 exon 5765201 5765267 5765201 ID=MS.gene071612.t1.exon2;Parent=MS.gene071612.t1
chr7.1 CDS 5765201 5765267 5765201 ID=cds.MS.gene071612.t1;Parent=MS.gene071612.t1
chr7.1 exon 5763510 5764691 5763510 ID=MS.gene071612.t1.exon3;Parent=MS.gene071612.t1
chr7.1 CDS 5763510 5764691 5763510 ID=cds.MS.gene071612.t1;Parent=MS.gene071612.t1
chr7.1 exon 5762637 5763185 5762637 ID=MS.gene071612.t1.exon4;Parent=MS.gene071612.t1
chr7.1 CDS 5762637 5763185 5762637 ID=cds.MS.gene071612.t1;Parent=MS.gene071612.t1
Gene Sequence

>MS.gene071612

ATGGGAGTTGTAACTCTTGGTGAATTGAAGCCTAGTGTTTCAGGAAGAAGGACTTTTCGTCCAAGTTCAAGCATAAGACATGCCACTGAATGGTATTATAATTTTCTTACTACTTTTTTCTTTTTTTTTGAAGGATTCTTACTACTTCTAGAAGTTTTTATTTATTTACACATATTCCTAGAAGTTATTCAGAAACATGCAAGTGTCTAAGTCTGTCTCATATCTATAATACCACTTCAAGATTTCATGAAATTCAACAATACTTGAATGAGCTGACACAAGTCTTATTGAGTTCGAGTTTGGGGGTCTTACACAACATCAACGTTAAAGCTCTTGAGATAGCTATACCTCCCTTCAGATCCTATTATGGTTGATGAACTAATTTCCTACGAAATACCAACACAAACACGGACATTGATAACAATTTAAGAAAATGAACGTAGTCAAATATAACTAATCGTGTTAGTGTCGTGTCGTTATTGGACACCTTGAGATTGGAAAATTAAGATGTAAAATTTGACCTTGATGTAGTCCTTTACCAAACAATGACATGATGCTCGATTTTGAATGGTTTAGACCTCATCTGTTAGCTATATGAAACAATTGATGTTTTTCATCCATCAATTATTATCATACTATTGTTTTAGCTTTTGGCCTAAATGAATTTGGAAATGCAAAGCTCACCGACAATGGACAATTTTTTTGGCTTCACATAGAACATGACAACTGTGAAATCAACTTGACCATGCTAGCGTGAAACTCCAATTATTTGCATTAATGGGTTCCACTATATTGAAATAGCCATTCCTAAAATATTATTTTGATACAGAAATCAAAACTTAAGTAACCATTTTGAGGCTATTCTTATCCAATGTCTTATTATTGCACCATTTATTGCATACATAAAAAATATATGCTAATAGAGTAGTCTCTTTCAAATGTCTCTGAAAATTTCAATTTTTGGTAATAATAATGTACGCCTTGCCATGCTTTGAAATTTTCATGTCTACGTGTATATAATGATTCAGGAAGAGTCTTTTTTTGCAGGCCAATATCTGATGTCTCCAGTGATCTTACCATCCAAGTAGGAGCATCAACCTATTCACTTCACAAGGTAAATTAAAACAATCTTCCATTCTGATATGTTATAATTATACATTCAACATGGTTTTCTCTGGTTTACATTCCAAGTTAGGTGGCAATGAATAGTTGGCAATTTTCTAAGTAGATCATTATAATTTTGCTATGAACATACATAGTTAATTAATTTTATGAGTTTAATTTTGATACACCGTTAGTATAAAAGGTTTTAAATCGTCAACAAATCACAAACAATCATATCTGTGACTTAAGAAATAGTTGTGATTAATAAAATCAAACATTTTTAATGATCAGACGATAATGATTGATTGACAACGTAAAAAAAATCTTTATAATGATACTGTATATGAATTCAATCCATCTTATATAGTATGTTATCAGCAGATAATTTTCCTGTCAAATGTAGTTTTGCTATATGTGTAGTTTCCATTATGCTTTTGAGCTCTTGGTGGCTTCTTTTCATGCATCATTATGCATATTTTCTCACTACTTTGTACTTAAACTCTTGTTATTTTTCCCTAGTTTCCTCTTGTTTCTAGGAGTGGAAGATTTAGGAAGCTGCTATCTGAATCAAAAGATTCTAAAGTTCCGCGCGTAAGTCTTCCGACCGTGCCAGGTGGTGTAGATGCATTTGAAATAGCTGCAAAATTCTGCTATGGAATCAATGTGGAATTCACCCTCTCGAATATTGCTATGCTATATTGTATATCTCATTTTCTTGAAATGACAGAAGAATTCTCAGAAAAGAATTTGGTGACAAGAGCTGAATCATATCTAAAGGAAACGGTACTCCCAAACACATCGAACATTATACAGGTTCTTCACCATTGTGAAAATCTTGTTCCTTTATCAGAAGATATCAACCTTGTTAATAGGCTAATCAATGCAATTGCAAATAATGCATGCAAAGAGCAACTAACTTCTGGTTTGTTAAAACTTGATCACAACTTTCCTTCTAAAACATTATCAATGATGGAACCAGAAACACCCTTAGATTGGTGGGGAAACTCTTTCAACGTTCTTAGTCTTGATTTCTTCGAACGAGTTATATCGGTTATGAAATCGAAGGGATTAACACAAGAGTTGATCAGCAAAATTTTGGTAAACTATGCACATAATTCTCTTCAAGGGACTAGTAGTGTTAGTTCCCTTGACATTGAATTGCAGAAGAAACAAAGGGTCATTGTTGAAACTATAGTTCGCTTACTACCAACTCAATCTAGGAAAAGCTCAGTTCCAATAGCATTTCTTTCATGTTTATTGAAAACTGCAATAGCAACATTAGTATCAACTTCTTGTAGAAGTGATTTGGAGAGGCGGATCGGTTTACAACTCGATCAGGCAATTCTTGAAGACATACTTATTCCAACGAATTCACCTTCGAGTGCTCACAACACAATGTATGATATAGATTCAATTTTGAGGATCTTTTCTACTTTTCTGAATTTGGACGAGGTGGATGATGAAGACAGTGACTTCAGAGATGAAAATCAAATGATGTATGAGTATGAATTTGACAGTCCTGGATCTCCAAAGCAAAGCTCAATTCTTAAGGTATCCAAATTACTTGACAATTTTCTCGCTGAAGTAGCACTAGACTCAAACTTGTTGCCATCAAAATTCATAGCACTTGCAGAACTACTTCCGGATCATGCTCGCGTTACAAGCGACGGACTCTATCGAGCTGTTGACATCTTCCTTAAGGTTAGAACTCAAAATCGAGTTCCTTCTATTGAAAACACTATTAAGAATTTCATTACTCTTCTGTTTTATAAAAATGATTTACACATACGTTTATTTATAGCCCATAACGTTAGAAAATAATATTATGACACAACAAGAGAGTAAAATATGATTGTAAGTCTGTGTAAGAATTTTGACAGTGTGATTGCATTATTGCATACTCATTAAACTCTTAACTAAGTGCCTTGCTGCCGCGACACACTGATTCAACTCTTGTTGCTTTGATTTGTAAAGAAAGGAAAATATTAATTAATGACTGAAATTGTTGGTTTATTTATCATATAGGTTCATCCGAACATTAAGGACTCGGAGCGATACCGCCTAAGCAAAACAATTGATTGTCAGAAACTATCTCAAGAAGCATGCAGCCATGCCGCACAAAATGAAAGGCTACCAGTTCAAATAGGTGTACAAGTTCTTTACTACGAACAAATAAGGCTTCGAAATGCGATGAATGGAGGACACAATCAAATCTTGTTTGGTGGTATTCATGGTCAATTTCCTCAAAGATCAGGGAGTGGTATAGGAAGTGGAGCAATTTCTCCTAGAGATAACTATGCATCGGTAAGAAGAGAGAATCGAGAGCTGAAGCTTGAAGTAACAAGAATGAGAATGAGGTTGAATGATTTGGAGAAAGATCATGTTTCTATGAAGCAAGAGCTTGTGAAGACACATCCTGCACGCAAATTCTTCAAATCATTTGCTCAAAAATTAAGAAAGTTCAATGCTCTATTCCGTATTCACAGTATTCGTGGCAGTGGAACTGGAAGGTCTAGTCCACAACCACGGTCCCGGTTTCCTTTTCAAAAGAGAAGGTGCCACTCAGTTTCATGA
Protein sequence

>MS.gene071612.t1

MGVVTLGELKPSVSGRRTFRPSSSIRHATEWPISDVSSDLTIQVGASTYSLHKFPLVSRSGRFRKLLSESKDSKVPRVSLPTVPGGVDAFEIAAKFCYGINVEFTLSNIAMLYCISHFLEMTEEFSEKNLVTRAESYLKETVLPNTSNIIQVLHHCENLVPLSEDINLVNRLINAIANNACKEQLTSGLLKLDHNFPSKTLSMMEPETPLDWWGNSFNVLSLDFFERVISVMKSKGLTQELISKILVNYAHNSLQGTSSVSSLDIELQKKQRVIVETIVRLLPTQSRKSSVPIAFLSCLLKTAIATLVSTSCRSDLERRIGLQLDQAILEDILIPTNSPSSAHNTMYDIDSILRIFSTFLNLDEVDDEDSDFRDENQMMYEYEFDSPGSPKQSSILKVSKLLDNFLAEVALDSNLLPSKFIALAELLPDHARVTSDGLYRAVDIFLKVHPNIKDSERYRLSKTIDCQKLSQEACSHAAQNERLPVQIGVQVLYYEQIRLRNAMNGGHNQILFGGIHGQFPQRSGSGIGSGAISPRDNYASVRRENRELKLEVTRMRMRLNDLEKDHVSMKQELVKTHPARKFFKSFAQKLRKFNALFRIHSIRGSGTGRSSPQPRSRFPFQKRRCHSVS