Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072612.t1 | XP_003626112.1 | 98.3 | 420 | 7 | 0 | 1 | 420 | 1 | 420 | 6.40E-231 | 809.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072612.t1 | Q6ZMB5 | 40.8 | 336 | 169 | 4 | 20 | 325 | 66 | 401 | 2.2e-62 | 241.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072612.t1 | Q2HUZ5 | 98.3 | 420 | 7 | 0 | 1 | 420 | 1 | 420 | 4.6e-231 | 809.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050479 | MS.gene072612 | 0.824323 | 8.59E-54 | -1.69E-46 |
| MS.gene050547 | MS.gene072612 | 0.813272 | 2.78E-51 | -1.69E-46 |
| MS.gene050811 | MS.gene072612 | 0.907144 | 6.96E-81 | -1.69E-46 |
| MS.gene052289 | MS.gene072612 | 0.816534 | 5.26E-52 | -1.69E-46 |
| MS.gene054343 | MS.gene072612 | -0.8112 | 7.89E-51 | -1.69E-46 |
| MS.gene054884 | MS.gene072612 | 0.80944 | 1.89E-50 | -1.69E-46 |
| MS.gene055370 | MS.gene072612 | -0.817363 | 3.43E-52 | -1.69E-46 |
| MS.gene056633 | MS.gene072612 | -0.806054 | 9.91E-50 | -1.69E-46 |
| MS.gene057196 | MS.gene072612 | -0.80377 | 2.97E-49 | -1.69E-46 |
| MS.gene059512 | MS.gene072612 | -0.836238 | 1.05E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene072612 | MS.gene050811 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072612.t1 | MTR_7g111160 | 99.762 | 420 | 1 | 0 | 1 | 420 | 1 | 420 | 0.0 | 858 |
| MS.gene072612.t1 | MTR_3g090180 | 35.955 | 267 | 149 | 3 | 20 | 265 | 28 | 293 | 2.98e-43 | 157 |
| MS.gene072612.t1 | MTR_2g042580 | 34.409 | 279 | 162 | 4 | 20 | 279 | 31 | 307 | 4.46e-40 | 148 |
| MS.gene072612.t1 | MTR_3g118470 | 34.201 | 269 | 151 | 5 | 35 | 277 | 38 | 306 | 3.40e-36 | 139 |
| MS.gene072612.t1 | MTR_3g090180 | 34.632 | 231 | 129 | 3 | 56 | 265 | 9 | 238 | 1.12e-31 | 125 |
| MS.gene072612.t1 | MTR_3g090180 | 35.211 | 213 | 116 | 3 | 74 | 265 | 13 | 224 | 1.00e-29 | 119 |
| MS.gene072612.t1 | MTR_4g050765 | 29.670 | 273 | 168 | 5 | 15 | 271 | 18 | 282 | 5.31e-26 | 107 |
| MS.gene072612.t1 | MTR_2g012360 | 29.670 | 273 | 168 | 5 | 15 | 271 | 18 | 282 | 5.31e-26 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072612.t1 | AT3G05940 | 77.566 | 419 | 93 | 1 | 1 | 418 | 1 | 419 | 0.0 | 671 |
| MS.gene072612.t1 | AT5G26740 | 75.592 | 422 | 101 | 2 | 1 | 420 | 1 | 422 | 0.0 | 637 |
| MS.gene072612.t1 | AT5G26740 | 75.592 | 422 | 101 | 2 | 1 | 420 | 1 | 422 | 0.0 | 637 |
| MS.gene072612.t1 | AT5G26740 | 75.592 | 422 | 101 | 2 | 1 | 420 | 1 | 422 | 0.0 | 637 |
| MS.gene072612.t1 | AT1G77220 | 36.431 | 269 | 152 | 3 | 20 | 269 | 53 | 321 | 9.06e-43 | 157 |
| MS.gene072612.t1 | AT4G38360 | 34.520 | 281 | 161 | 5 | 20 | 277 | 31 | 311 | 1.38e-41 | 153 |
| MS.gene072612.t1 | AT1G23070 | 35.018 | 277 | 150 | 5 | 15 | 269 | 23 | 291 | 2.69e-37 | 140 |
| MS.gene072612.t1 | AT1G77220 | 33.333 | 273 | 163 | 3 | 17 | 270 | 50 | 322 | 5.66e-37 | 138 |
| MS.gene072612.t1 | AT4G38360 | 32.812 | 256 | 151 | 3 | 18 | 252 | 29 | 284 | 4.33e-34 | 129 |
| MS.gene072612.t1 | AT4G21570 | 31.228 | 285 | 162 | 9 | 12 | 273 | 12 | 285 | 2.74e-29 | 116 |
| MS.gene072612.t1 | AT1G11200 | 29.749 | 279 | 174 | 5 | 15 | 278 | 19 | 290 | 8.75e-29 | 114 |
| MS.gene072612.t1 | AT4G21570 | 29.114 | 316 | 158 | 11 | 12 | 273 | 12 | 315 | 1.68e-23 | 100 |
Find 97 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGTGTAACAACAACTAAAA+TGG | 0.171683 | 7.4:+4969937 | None:intergenic |
| TCTGCTGCAGGAACTTCTTC+TGG | 0.174386 | 7.4:+4967800 | None:intergenic |
| TTTCTCACATTATCCATCTC+TGG | 0.262507 | 7.4:+4968025 | None:intergenic |
| TTGCTTTCCTCCTATACCTT+TGG | 0.282986 | 7.4:-4970237 | MS.gene072612:CDS |
| CTGTTGTATTCCTTACTTAC+TGG | 0.302664 | 7.4:-4969730 | MS.gene072612:CDS |
| AGTAGTACTCCCTCAAATTC+TGG | 0.343585 | 7.4:-4967941 | MS.gene072612:CDS |
| CTAGCATGGGTTGGTGGTCC+TGG | 0.350385 | 7.4:-4970320 | MS.gene072612:CDS |
| GCTCCAGCATATTCTTTGTA+TGG | 0.352134 | 7.4:+4968356 | None:intergenic |
| TCCTGTCACTTTGTCTAGCA+TGG | 0.352706 | 7.4:-4970334 | MS.gene072612:CDS |
| CACCGTCGGTGCAATCGCTT+TGG | 0.369605 | 7.4:-4971887 | MS.gene072612:CDS |
| TTCTTTCTTGCTGCAAAGTC+GGG | 0.373340 | 7.4:-4968473 | MS.gene072612:CDS |
| ATATGGTATGGACGCAGAAT+TGG | 0.374420 | 7.4:+4967859 | None:intergenic |
| AGGAACTTCTTCTGGGTAAC+TGG | 0.377025 | 7.4:+4967808 | None:intergenic |
| ACTTTATGATAATAAACTTT+GGG | 0.378211 | 7.4:+4969753 | None:intergenic |
| CAGCAGATAAAGCCGGTCTT+AGG | 0.392911 | 7.4:-4967784 | MS.gene072612:CDS |
| CGTGGTTTGACCGCTAGCCT+TGG | 0.393123 | 7.4:-4968317 | MS.gene072612:CDS |
| TTCTCACATTATCCATCTCT+GGG | 0.397889 | 7.4:+4968026 | None:intergenic |
| TACAGATAACTTACACTTCA+CGG | 0.401405 | 7.4:+4971201 | None:intergenic |
| GACTTTATGATAATAAACTT+TGG | 0.402571 | 7.4:+4969752 | None:intergenic |
| TTGTTATAAGTTTGAGTGGT+CGG | 0.403312 | 7.4:-4970292 | MS.gene072612:CDS |
| GCATCAGAGTTTGAAGCATC+AGG | 0.427306 | 7.4:+4967911 | None:intergenic |
| CTGTTTCAGCTATGAAGCTT+GGG | 0.427514 | 7.4:-4970369 | MS.gene072612:intron |
| GTTCTTTCTTGCTGCAAAGT+CGG | 0.434663 | 7.4:-4968474 | MS.gene072612:CDS |
| ACTTACCCATCCAAAGGTAT+AGG | 0.437456 | 7.4:+4970227 | None:intergenic |
| AAATTACCTGCCAGTAAGTA+AGG | 0.437928 | 7.4:+4969720 | None:intergenic |
| CCTGTCACTTTGTCTAGCAT+GGG | 0.441185 | 7.4:-4970333 | MS.gene072612:CDS |
| GTGGTTTGACCGCTAGCCTT+GGG | 0.442097 | 7.4:-4968316 | MS.gene072612:CDS |
| AGTGTAACAACAACTAAAAT+GGG | 0.443292 | 7.4:+4969938 | None:intergenic |
| CTGCTGCAGGAACTTCTTCT+GGG | 0.444198 | 7.4:+4967801 | None:intergenic |
| TCAATAAGTGTCAAATCATA+TGG | 0.449032 | 7.4:+4967842 | None:intergenic |
| AGATACAAGTATGACTGCTT+TGG | 0.453832 | 7.4:+4969872 | None:intergenic |
| GAATATGCTGGAGCTAATAT+AGG | 0.458813 | 7.4:-4968347 | MS.gene072612:CDS |
| TTTCCTCCTATACCTTTGGA+TGG | 0.458821 | 7.4:-4970233 | MS.gene072612:CDS |
| ACTGTTTCAGCTATGAAGCT+TGG | 0.464786 | 7.4:-4970370 | MS.gene072612:intron |
| TTCTTTACAACCACAGTGAA+GGG | 0.466359 | 7.4:-4968096 | MS.gene072612:CDS |
| TGTTATAAGTTTGAGTGGTC+GGG | 0.467257 | 7.4:-4970291 | MS.gene072612:CDS |
| CTTTGTCTAGCATGGGTTGG+TGG | 0.473508 | 7.4:-4970326 | MS.gene072612:CDS |
| ACACTTATTCTTTACGCTAA+GGG | 0.475471 | 7.4:-4969920 | MS.gene072612:CDS |
| AACTTTGGGACTGGATTGAA+TGG | 0.476786 | 7.4:+4969767 | None:intergenic |
| TGATTTGACACTTATTGACT+TGG | 0.478189 | 7.4:-4967837 | MS.gene072612:CDS |
| TACACTTATTCTTTACGCTA+AGG | 0.478364 | 7.4:-4969921 | MS.gene072612:CDS |
| ATGATAATAAACTTTGGGAC+TGG | 0.490038 | 7.4:+4969758 | None:intergenic |
| AAGTGTCAAATCATATGGTA+TGG | 0.493986 | 7.4:+4967847 | None:intergenic |
| TTATCCATCTCTGGGCCAAT+CGG | 0.496708 | 7.4:+4968034 | None:intergenic |
| AAGCAGCTTCGTCAGCATCC+TGG | 0.498366 | 7.4:+4968444 | None:intergenic |
| TAGGTTCAGTATAATTAAGA+AGG | 0.501333 | 7.4:+4971842 | None:intergenic |
| TTCCTCCTATACCTTTGGAT+GGG | 0.504704 | 7.4:-4970232 | MS.gene072612:intron |
| AAACTTATAACAACTGATCC+AGG | 0.504735 | 7.4:+4970302 | None:intergenic |
| TCACGAACGTTTGTTCCGAT+TGG | 0.505852 | 7.4:-4968049 | MS.gene072612:CDS |
| TGTATTCCTTACTTACTGGC+AGG | 0.506772 | 7.4:-4969726 | MS.gene072612:intron |
| AGGCAGCGAACCAGAATTTG+AGG | 0.513395 | 7.4:+4967931 | None:intergenic |
| TCACTTTGTCTAGCATGGGT+TGG | 0.514179 | 7.4:-4970329 | MS.gene072612:CDS |
| TGCAAAGTCGGGATTCATCC+AGG | 0.517372 | 7.4:-4968462 | MS.gene072612:CDS |
| CACTTATTCTTTACGCTAAG+GGG | 0.518846 | 7.4:-4969919 | MS.gene072612:CDS |
| AACCACAGTGAAGGGGAAGA+AGG | 0.518899 | 7.4:-4968088 | MS.gene072612:CDS |
| ACAATGAAGCGTTGATAAGT+AGG | 0.519462 | 7.4:+4971823 | None:intergenic |
| TTGAAAGCCGCGGTAAAACA+AGG | 0.520223 | 7.4:+4971240 | None:intergenic |
| TTTCCATACAAAGAATATGC+TGG | 0.525305 | 7.4:-4968359 | MS.gene072612:CDS |
| AGACCGGCTTTATCTGCTGC+AGG | 0.526348 | 7.4:+4967788 | None:intergenic |
| TTCATACGTAAGTGCAAGCA+AGG | 0.532037 | 7.4:-4969986 | MS.gene072612:CDS |
| TTACGCTAAGGGGAAATACA+AGG | 0.532724 | 7.4:-4969909 | MS.gene072612:CDS |
| AAGAAGGAACAAGGAAGTAC+AGG | 0.535851 | 7.4:-4968072 | MS.gene072612:CDS |
| AAGGCTAGCGGTCAAACCAC+GGG | 0.540121 | 7.4:+4968319 | None:intergenic |
| AGCCAAAGCGATTGCACCGA+CGG | 0.545111 | 7.4:+4971885 | None:intergenic |
| CCTTATCGATCACCTAAGAC+CGG | 0.547244 | 7.4:+4967772 | None:intergenic |
| TGTATGGAAATGCATAAAAG+TGG | 0.547274 | 7.4:+4968372 | None:intergenic |
| TCACCTGGTGGACTGTATCA+TGG | 0.557444 | 7.4:+4968267 | None:intergenic |
| AATCAAATCTTCCTTGCTTG+TGG | 0.562585 | 7.4:-4967888 | MS.gene072612:CDS |
| GTTCTTTACAACCACAGTGA+AGG | 0.564984 | 7.4:-4968097 | MS.gene072612:CDS |
| CAAGGCTAGCGGTCAAACCA+CGG | 0.567441 | 7.4:+4968318 | None:intergenic |
| TACCCATCCAAAGGTATAGG+AGG | 0.567651 | 7.4:+4970230 | None:intergenic |
| TGTTCCGATTGGCCCAGAGA+TGG | 0.569333 | 7.4:-4968038 | MS.gene072612:CDS |
| CTAAGGGGAAATACAAGGAT+GGG | 0.571154 | 7.4:-4969904 | MS.gene072612:CDS |
| TCAGTTGTTATAAGTTTGAG+TGG | 0.572193 | 7.4:-4970296 | MS.gene072612:CDS |
| TGAGATGCTTATTGCTGCAG+TGG | 0.573649 | 7.4:-4968396 | MS.gene072612:CDS |
| GGCAGCGAACCAGAATTTGA+GGG | 0.578147 | 7.4:+4967932 | None:intergenic |
| GTTCCTGCAGCAGATAAAGC+CGG | 0.587118 | 7.4:-4967791 | MS.gene072612:CDS |
| GCTAAGGGGAAATACAAGGA+TGG | 0.587400 | 7.4:-4969905 | MS.gene072612:CDS |
| CCCATGCTAGACAAAGTGAC+AGG | 0.598216 | 7.4:+4970333 | None:intergenic |
| GAGATGCTTATTGCTGCAGT+GGG | 0.611426 | 7.4:-4968395 | MS.gene072612:CDS |
| CTATACATTCTCATATACAA+TGG | 0.615648 | 7.4:-4969840 | MS.gene072612:CDS |
| GTGAAGGGGAAGAAGGAACA+AGG | 0.618383 | 7.4:-4968081 | MS.gene072612:CDS |
| TATGCTGGAGCTAATATAGG+TGG | 0.621058 | 7.4:-4968344 | MS.gene072612:CDS |
| ATTGGACACATCCACAAGCA+AGG | 0.624740 | 7.4:+4967877 | None:intergenic |
| AGAACATAATCATGATACGT+TGG | 0.630961 | 7.4:+4968115 | None:intergenic |
| CAAAGCATGCCCAAGGCTAG+CGG | 0.631165 | 7.4:+4968307 | None:intergenic |
| TTCCTTCTTCCCCTTCACTG+TGG | 0.632503 | 7.4:+4968086 | None:intergenic |
| TTACCATGATACAGTCCACC+AGG | 0.635265 | 7.4:-4968270 | MS.gene072612:intron |
| ATGCAAACTTACCCATCCAA+AGG | 0.637240 | 7.4:+4970221 | None:intergenic |
| TCTTTACAACCACAGTGAAG+GGG | 0.644033 | 7.4:-4968095 | MS.gene072612:CDS |
| TAAGCATATAACTGGAAACA+AGG | 0.644662 | 7.4:-4967999 | MS.gene072612:CDS |
| TCAACTTCAAAGCATGCCCA+AGG | 0.650573 | 7.4:+4968300 | None:intergenic |
| TGAAAGCCGCGGTAAAACAA+GGG | 0.670598 | 7.4:+4971241 | None:intergenic |
| CAAGTCATCAGACAGACTGA+CGG | 0.684226 | 7.4:+4970260 | None:intergenic |
| TTAAAGTAGATTGAAAGCCG+CGG | 0.686396 | 7.4:+4971230 | None:intergenic |
| TCATACGTAAGTGCAAGCAA+GGG | 0.690075 | 7.4:-4969985 | MS.gene072612:CDS |
| GCTAATATAGGTGGATCCCG+TGG | 0.715148 | 7.4:-4968335 | MS.gene072612:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATTATAATTTCAAATTC+AGG | + | chr7.4:4969271-4969290 | None:intergenic | 10.0% |
| !!! | TTTTTAAAAAAAACTTTAAG+AGG | - | chr7.4:4969630-4969649 | MS.gene072612:intron | 10.0% |
| !! | AATGTTAAAATAGTAAATGA+AGG | + | chr7.4:4969000-4969019 | None:intergenic | 15.0% |
| !! | ACTTTATGATAATAAACTTT+GGG | + | chr7.4:4969965-4969984 | None:intergenic | 15.0% |
| !! | ATATCTAAAAAATTGTCATT+GGG | - | chr7.4:4968878-4968897 | MS.gene072612:intron | 15.0% |
| !! | ATGTTAAAATAGTAAATGAA+GGG | + | chr7.4:4968999-4969018 | None:intergenic | 15.0% |
| !! | TATATCTAAAAAATTGTCAT+TGG | - | chr7.4:4968877-4968896 | MS.gene072612:intron | 15.0% |
| !!! | ATGTTTATTTTTCTAATGAT+AGG | - | chr7.4:4968903-4968922 | MS.gene072612:intron | 15.0% |
| !!! | TCAAATTAATTTTTTGAAGA+TGG | - | chr7.4:4971115-4971134 | MS.gene072612:intron | 15.0% |
| !!! | TTATACATCTTTCATTTTTA+TGG | - | chr7.4:4970018-4970037 | MS.gene072612:intron | 15.0% |
| !!! | TTTTTGTTTTTCATTTCTTA+GGG | - | chr7.4:4971212-4971231 | MS.gene072612:intron | 15.0% |
| !!! | TTTTTTGTTTTTCATTTCTT+AGG | - | chr7.4:4971211-4971230 | MS.gene072612:intron | 15.0% |
| !! | AGAAAAAATAAGCATATAAC+TGG | - | chr7.4:4971708-4971727 | MS.gene072612:intron | 20.0% |
| !! | ATATAGAAAGTTGTAAATTG+TGG | - | chr7.4:4968212-4968231 | MS.gene072612:intron | 20.0% |
| !! | ATATGGCATAGTAATAAAAA+AGG | - | chr7.4:4971013-4971032 | MS.gene072612:intron | 20.0% |
| !! | ATTATTTATTTGCATGCAAA+AGG | - | chr7.4:4971068-4971087 | MS.gene072612:intron | 20.0% |
| !! | GACTTTATGATAATAAACTT+TGG | + | chr7.4:4969966-4969985 | None:intergenic | 20.0% |
| !! | TATCTAAAAAATTGTCATTG+GGG | - | chr7.4:4968879-4968898 | MS.gene072612:intron | 20.0% |
| !! | TGAGAATAACATTATAAGAT+GGG | + | chr7.4:4970447-4970466 | None:intergenic | 20.0% |
| !! | TGTTAAAATAGTAAATGAAG+GGG | + | chr7.4:4968998-4969017 | None:intergenic | 20.0% |
| !! | TTGAGAATAACATTATAAGA+TGG | + | chr7.4:4970448-4970467 | None:intergenic | 20.0% |
| !!! | AAATTCTAAGCTTGTTTATA+TGG | - | chr7.4:4970996-4971015 | MS.gene072612:intron | 20.0% |
| !!! | TGTTTTATGTTACCATAAAA+AGG | - | chr7.4:4970129-4970148 | MS.gene072612:intron | 20.0% |
| !!! | TTTTGTTTTTCATTTCTTAG+GGG | - | chr7.4:4971213-4971232 | MS.gene072612:intron | 20.0% |
| ! | AAACCTTGAGAAATAGAAAA+CGG | + | chr7.4:4970959-4970978 | None:intergenic | 25.0% |
| ! | AACCAAATAGGTAAAACAAT+GGG | + | chr7.4:4968267-4968286 | None:intergenic | 25.0% |
| ! | AAGTGTAACAACAACTAAAA+TGG | + | chr7.4:4969781-4969800 | None:intergenic | 25.0% |
| ! | AATCAATTATGGAGTAAAGA+TGG | + | chr7.4:4970843-4970862 | None:intergenic | 25.0% |
| ! | ACACAAGGAACTATAAAATA+TGG | + | chr7.4:4971504-4971523 | None:intergenic | 25.0% |
| ! | AGGTAAGTTAAAAATGTAGT+TGG | + | chr7.4:4970935-4970954 | None:intergenic | 25.0% |
| ! | AGTAGTATCAGGTTATTAAT+TGG | + | chr7.4:4971560-4971579 | None:intergenic | 25.0% |
| ! | AGTGTAACAACAACTAAAAT+GGG | + | chr7.4:4969780-4969799 | None:intergenic | 25.0% |
| ! | CATCTATGAAACAAATTCAA+AGG | + | chr7.4:4969587-4969606 | None:intergenic | 25.0% |
| ! | CTATACATTCTCATATACAA+TGG | - | chr7.4:4969875-4969894 | MS.gene072612:CDS | 25.0% |
| ! | GAAAATGAAGAAGAAATCAA+AGG | + | chr7.4:4968315-4968334 | None:intergenic | 25.0% |
| ! | GTTAAAATAGTAAATGAAGG+GGG | + | chr7.4:4968997-4969016 | None:intergenic | 25.0% |
| ! | TACATAAACAAAGAAAAACG+TGG | + | chr7.4:4967980-4967999 | None:intergenic | 25.0% |
| ! | TAGGTTCAGTATAATTAAGA+AGG | + | chr7.4:4967876-4967895 | None:intergenic | 25.0% |
| ! | TCAATAAGTGTCAAATCATA+TGG | + | chr7.4:4971876-4971895 | None:intergenic | 25.0% |
| ! | TCTTTACTCCATAATTGATT+TGG | - | chr7.4:4970843-4970862 | MS.gene072612:intron | 25.0% |
| ! | TGATTTATGATAGAACACTA+TGG | - | chr7.4:4969120-4969139 | MS.gene072612:intron | 25.0% |
| ! | TTAAAATAGTAAATGAAGGG+GGG | + | chr7.4:4968996-4969015 | None:intergenic | 25.0% |
| ! | TTTGTTAATTGCTTTGTAGT+GGG | - | chr7.4:4971091-4971110 | MS.gene072612:intron | 25.0% |
| !! | AAAAAAAACTTTAAGAGGCT+AGG | - | chr7.4:4969635-4969654 | MS.gene072612:intron | 25.0% |
| !! | ACAACATCATGATTGATTTA+AGG | - | chr7.4:4968711-4968730 | MS.gene072612:intron | 25.0% |
| !! | ACATTATAAGATGGGATTTT+TGG | + | chr7.4:4970439-4970458 | None:intergenic | 25.0% |
| !! | AGGTATATATAACCATTTTC+AGG | + | chr7.4:4969553-4969572 | None:intergenic | 25.0% |
| !! | CTATGCTTTTCTCATATTTT+CGG | - | chr7.4:4970042-4970061 | MS.gene072612:intron | 25.0% |
| !! | TCATTGGTGTATTTGTTAAT+TGG | - | chr7.4:4968021-4968040 | MS.gene072612:CDS | 25.0% |
| !! | TTGCATCTGATTCATATTTT+TGG | - | chr7.4:4969511-4969530 | MS.gene072612:intron | 25.0% |
| !! | TTTGTATTTTCTTTTGCTAG+AGG | - | chr7.4:4969030-4969049 | MS.gene072612:intron | 25.0% |
| !!! | AAACTTTAATTTTCTCTGAC+AGG | - | chr7.4:4968427-4968446 | MS.gene072612:CDS | 25.0% |
| !!! | ACTGTTTTTTCTTATACACA+AGG | - | chr7.4:4970728-4970747 | MS.gene072612:intron | 25.0% |
| !!! | CTGTTTTTTCTTATACACAA+GGG | - | chr7.4:4970729-4970748 | MS.gene072612:intron | 25.0% |
| !!! | TACATTCATTGTTTTTCACT+TGG | - | chr7.4:4968120-4968139 | MS.gene072612:CDS | 25.0% |
| !!! | TTTGTTTTTCATTTCTTAGG+GGG | - | chr7.4:4971214-4971233 | MS.gene072612:intron | 25.0% |
| AAACAGTTGAGAAGAGAAAA+TGG | + | chr7.4:4969332-4969351 | None:intergenic | 30.0% | |
| AAACTTATAACAACTGATCC+AGG | + | chr7.4:4969416-4969435 | None:intergenic | 30.0% | |
| AAAGGAAGTTGACATTCATA+TGG | - | chr7.4:4971031-4971050 | MS.gene072612:intron | 30.0% | |
| AAAGTGTATTTCCATACAGT+GGG | + | chr7.4:4969674-4969693 | None:intergenic | 30.0% | |
| AACCTTGAGAAATAGAAAAC+GGG | + | chr7.4:4970958-4970977 | None:intergenic | 30.0% | |
| AAGAAGAGAAATTAACTGAC+CGG | + | chr7.4:4967937-4967956 | None:intergenic | 30.0% | |
| AAGCTTGAATGTTGAAAACA+CGG | + | chr7.4:4970413-4970432 | None:intergenic | 30.0% | |
| AAGTGTCAAATCATATGGTA+TGG | + | chr7.4:4971871-4971890 | None:intergenic | 30.0% | |
| ACACTTATTCTTTACGCTAA+GGG | - | chr7.4:4969795-4969814 | MS.gene072612:CDS | 30.0% | |
| ACTTCATCGTATACATATCA+AGG | + | chr7.4:4968766-4968785 | None:intergenic | 30.0% | |
| AGAACATAATCATGATACGT+TGG | + | chr7.4:4971603-4971622 | None:intergenic | 30.0% | |
| AGAATAACCAATGAACTAGA+AGG | + | chr7.4:4968851-4968870 | None:intergenic | 30.0% | |
| AGATCTAGAGATTAATGAGT+TGG | - | chr7.4:4969088-4969107 | MS.gene072612:intron | 30.0% | |
| AGCTATGTATGATATATCAC+TGG | + | chr7.4:4968671-4968690 | None:intergenic | 30.0% | |
| ATTCATTGCACGTTATTGTT+AGG | - | chr7.4:4970293-4970312 | MS.gene072612:CDS | 30.0% | |
| ATTCTAACACTACTTGGATA+AGG | + | chr7.4:4970275-4970294 | None:intergenic | 30.0% | |
| ATTTCAACAGTGACACATTT+AGG | + | chr7.4:4968093-4968112 | None:intergenic | 30.0% | |
| CAATGAATTCTAACACTACT+TGG | + | chr7.4:4970281-4970300 | None:intergenic | 30.0% | |
| CAGGGAGGAAAAAAAATATA+CGG | + | chr7.4:4968600-4968619 | None:intergenic | 30.0% | |
| CTAAATAACAGCAACAACAA+AGG | + | chr7.4:4968563-4968582 | None:intergenic | 30.0% | |
| CTTCATCGTATACATATCAA+GGG | + | chr7.4:4968765-4968784 | None:intergenic | 30.0% | |
| GAACCAAATAGGTAAAACAA+TGG | + | chr7.4:4968268-4968287 | None:intergenic | 30.0% | |
| GCGATAACATAGAAAAAAAG+CGG | + | chr7.4:4967799-4967818 | None:intergenic | 30.0% | |
| GGAAGAAGAAGAAAAAACAA+AGG | + | chr7.4:4971539-4971558 | None:intergenic | 30.0% | |
| GGATAATCAAACAACACAAA+TGG | + | chr7.4:4970822-4970841 | None:intergenic | 30.0% | |
| TAACCAACAAGCTAACATAT+AGG | + | chr7.4:4971147-4971166 | None:intergenic | 30.0% | |
| TAAGCATATAACTGGAAACA+AGG | - | chr7.4:4971716-4971735 | MS.gene072612:intron | 30.0% | |
| TACACTTATTCTTTACGCTA+AGG | - | chr7.4:4969794-4969813 | MS.gene072612:CDS | 30.0% | |
| TACAGATAACTTACACTTCA+CGG | + | chr7.4:4968517-4968536 | None:intergenic | 30.0% | |
| TATGTATTGTATTCCCTACT+AGG | - | chr7.4:4967994-4968013 | MS.gene072612:CDS | 30.0% | |
| TCAGTTGTTATAAGTTTGAG+TGG | - | chr7.4:4969419-4969438 | MS.gene072612:intron | 30.0% | |
| TGATGACTTTCACAAACAAA+AGG | + | chr7.4:4970911-4970930 | None:intergenic | 30.0% | |
| TGTATGGAAATGCATAAAAG+TGG | + | chr7.4:4971346-4971365 | None:intergenic | 30.0% | |
| TTCTAACACTACTTGGATAA+GGG | + | chr7.4:4970274-4970293 | None:intergenic | 30.0% | |
| TTGGATGACCAAATCAATTA+TGG | + | chr7.4:4970854-4970873 | None:intergenic | 30.0% | |
| TTGTTATAAGTTTGAGTGGT+CGG | - | chr7.4:4969423-4969442 | MS.gene072612:intron | 30.0% | |
| TTTCAACAGTGACACATTTA+GGG | + | chr7.4:4968092-4968111 | None:intergenic | 30.0% | |
| TTTCCATACAAAGAATATGC+TGG | - | chr7.4:4971356-4971375 | MS.gene072612:intron | 30.0% | |
| ! | AAAAGTGTATTTCCATACAG+TGG | + | chr7.4:4969675-4969694 | None:intergenic | 30.0% |
| ! | CATGATTGATTTAAGGTTCT+AGG | - | chr7.4:4968718-4968737 | MS.gene072612:intron | 30.0% |
| ! | CTAGTTCATTGGTTATTCTT+TGG | - | chr7.4:4968852-4968871 | MS.gene072612:intron | 30.0% |
| ! | GTTTGTTAATTGCTTTGTAG+TGG | - | chr7.4:4971090-4971109 | MS.gene072612:intron | 30.0% |
| ! | TGACATCAAGATCCTTTTTA+TGG | + | chr7.4:4970144-4970163 | None:intergenic | 30.0% |
| ! | TGATTTGACACTTATTGACT+TGG | - | chr7.4:4971878-4971897 | MS.gene072612:CDS | 30.0% |
| ! | TGTTTTTCACTTGGTTGAAA+GGG | - | chr7.4:4968129-4968148 | MS.gene072612:intron | 30.0% |
| ! | TTATTCTCAAGTTGCTATCA+GGG | - | chr7.4:4970458-4970477 | MS.gene072612:intron | 30.0% |
| ! | TTTTCTCTGTATGCTAAACT+TGG | + | chr7.4:4970873-4970892 | None:intergenic | 30.0% |
| !! | AACTTGTTGGTTGTGATTAA+GGG | - | chr7.4:4968631-4968650 | MS.gene072612:intron | 30.0% |
| !! | AAGATGATCAGTAACTTGTT+TGG | - | chr7.4:4970209-4970228 | MS.gene072612:intron | 30.0% |
| !! | ACCTCTAAAACTTCTATTGT+AGG | - | chr7.4:4969703-4969722 | MS.gene072612:intron | 30.0% |
| !! | ATCAGTAACTTGTTTGGATT+CGG | - | chr7.4:4970215-4970234 | MS.gene072612:intron | 30.0% |
| !! | ATGATAATAAACTTTGGGAC+TGG | + | chr7.4:4969960-4969979 | None:intergenic | 30.0% |
| !! | TACCCATTGTTTTACCTATT+TGG | - | chr7.4:4968262-4968281 | MS.gene072612:intron | 30.0% |
| !! | TTGTTTTTCACTTGGTTGAA+AGG | - | chr7.4:4968128-4968147 | MS.gene072612:intron | 30.0% |
| !!! | GCATTTGCTTTTTACACTAA+AGG | - | chr7.4:4971173-4971192 | MS.gene072612:intron | 30.0% |
| AAAGTTGTCATGCCTGAAAA+TGG | - | chr7.4:4969538-4969557 | MS.gene072612:intron | 35.0% | |
| AAATTACCTGCCAGTAAGTA+AGG | + | chr7.4:4969998-4970017 | None:intergenic | 35.0% | |
| AAGCGCTCTTGAAAATCTAA+TGG | - | chr7.4:4968337-4968356 | MS.gene072612:CDS | 35.0% | |
| AATCAAATCTTCCTTGCTTG+TGG | - | chr7.4:4971827-4971846 | MS.gene072612:CDS | 35.0% | |
| ACACCAATGAAAAACCTAGT+AGG | + | chr7.4:4968011-4968030 | None:intergenic | 35.0% | |
| ACCAAATAGAAAGAACTACG+AGG | + | chr7.4:4970647-4970666 | None:intergenic | 35.0% | |
| ACGTGGATAACAAACATTGA+AGG | + | chr7.4:4967963-4967982 | None:intergenic | 35.0% | |
| AGATACAAGTATGACTGCTT+TGG | + | chr7.4:4969846-4969865 | None:intergenic | 35.0% | |
| AGCGCTCTTGAAAATCTAAT+GGG | - | chr7.4:4968338-4968357 | MS.gene072612:CDS | 35.0% | |
| ATACGATGAAGTCTCTAGTA+TGG | - | chr7.4:4968774-4968793 | MS.gene072612:intron | 35.0% | |
| ATGGAAGTGAAAATGAGAAG+TGG | + | chr7.4:4970495-4970514 | None:intergenic | 35.0% | |
| CACAAACAAAAGGATCATCA+AGG | + | chr7.4:4970901-4970920 | None:intergenic | 35.0% | |
| CACCAATGAAAAACCTAGTA+GGG | + | chr7.4:4968010-4968029 | None:intergenic | 35.0% | |
| CACTTATTCTTTACGCTAAG+GGG | - | chr7.4:4969796-4969815 | MS.gene072612:CDS | 35.0% | |
| CCACAAATTTGAGTAGTATC+AGG | + | chr7.4:4971571-4971590 | None:intergenic | 35.0% | |
| CCTGATACTACTCAAATTTG+TGG | - | chr7.4:4971568-4971587 | MS.gene072612:intron | 35.0% | |
| CTGTTGTATTCCTTACTTAC+TGG | - | chr7.4:4969985-4970004 | MS.gene072612:CDS | 35.0% | |
| GAATATGCTGGAGCTAATAT+AGG | - | chr7.4:4971368-4971387 | MS.gene072612:intron | 35.0% | |
| GTCATTGAAAGATTCAGAGT+TGG | + | chr7.4:4970687-4970706 | None:intergenic | 35.0% | |
| GTTCCTTGTGTTGAAATTTC+TGG | - | chr7.4:4971513-4971532 | MS.gene072612:intron | 35.0% | |
| TATTGTGATGCTAGATGAAC+AGG | - | chr7.4:4970084-4970103 | MS.gene072612:intron | 35.0% | |
| TCCTCGTAGTTCTTTCTATT+TGG | - | chr7.4:4970643-4970662 | MS.gene072612:intron | 35.0% | |
| TGAACTTGGAAGGTCAAAAT+GGG | - | chr7.4:4968155-4968174 | MS.gene072612:intron | 35.0% | |
| TGCACGTTATTGTTAGGAAT+TGG | - | chr7.4:4970299-4970318 | MS.gene072612:CDS | 35.0% | |
| TGGAAGTGAAAATGAGAAGT+GGG | + | chr7.4:4970494-4970513 | None:intergenic | 35.0% | |
| TGTTATAAGTTTGAGTGGTC+GGG | - | chr7.4:4969424-4969443 | MS.gene072612:intron | 35.0% | |
| TGTTTCATGGTTCAACTTGT+TGG | - | chr7.4:4968618-4968637 | MS.gene072612:intron | 35.0% | |
| TTAAAGTAGATTGAAAGCCG+CGG | + | chr7.4:4968488-4968507 | None:intergenic | 35.0% | |
| TTCTCACATTATCCATCTCT+GGG | + | chr7.4:4971692-4971711 | None:intergenic | 35.0% | |
| TTCTTTACAACCACAGTGAA+GGG | - | chr7.4:4971619-4971638 | MS.gene072612:intron | 35.0% | |
| TTGAACTTGGAAGGTCAAAA+TGG | - | chr7.4:4968154-4968173 | MS.gene072612:intron | 35.0% | |
| TTTCTCACATTATCCATCTC+TGG | + | chr7.4:4971693-4971712 | None:intergenic | 35.0% | |
| ! | AACAAGTTGAACCATGAAAC+AGG | + | chr7.4:4968619-4968638 | None:intergenic | 35.0% |
| ! | ACAAGTTGAACCATGAAACA+GGG | + | chr7.4:4968618-4968637 | None:intergenic | 35.0% |
| ! | GTTATTCTCAAGTTGCTATC+AGG | - | chr7.4:4970457-4970476 | MS.gene072612:intron | 35.0% |
| ! | TTCCCTACTAGGTTTTTCAT+TGG | - | chr7.4:4968005-4968024 | MS.gene072612:CDS | 35.0% |
| ! | TTTTCTTTTGCTAGAGGTAG+AGG | - | chr7.4:4969036-4969055 | MS.gene072612:intron | 35.0% |
| !! | ACAATGAAGCGTTGATAAGT+AGG | + | chr7.4:4967895-4967914 | None:intergenic | 35.0% |
| !! | ATCTAGTCCTTCTAGTTCAT+TGG | - | chr7.4:4968841-4968860 | MS.gene072612:intron | 35.0% |
| !! | CAACTTGTTGGTTGTGATTA+AGG | - | chr7.4:4968630-4968649 | MS.gene072612:intron | 35.0% |
| !! | GCCTACAATAGAAGTTTTAG+AGG | + | chr7.4:4969707-4969726 | None:intergenic | 35.0% |
| !! | TAGCCTATATGTTAGCTTGT+TGG | - | chr7.4:4971141-4971160 | MS.gene072612:intron | 35.0% |
| !!! | TTTTTTTCCTCCCTGTTTCA+TGG | - | chr7.4:4968605-4968624 | MS.gene072612:intron | 35.0% |
| AAGAACTACGAGGAATGAGA+AGG | + | chr7.4:4970637-4970656 | None:intergenic | 40.0% | |
| AATGGGTAATTCAGTCAGTG+AGG | + | chr7.4:4968250-4968269 | None:intergenic | 40.0% | |
| ACAATAGATGTAGTGTGTGC+TGG | + | chr7.4:4970605-4970624 | None:intergenic | 40.0% | |
| ACTGTTTCAGCTATGAAGCT+TGG | - | chr7.4:4969345-4969364 | MS.gene072612:intron | 40.0% | |
| AGCACACACTACATCTATTG+TGG | - | chr7.4:4970604-4970623 | MS.gene072612:intron | 40.0% | |
| AGGACAGACAACAATTGTCA+GGG | + | chr7.4:4969251-4969270 | None:intergenic | 40.0% | |
| AGGACCTAATAAGAGACTGT+TGG | + | chr7.4:4968295-4968314 | None:intergenic | 40.0% | |
| AGGCCAGAAATTTCAACACA+AGG | + | chr7.4:4971519-4971538 | None:intergenic | 40.0% | |
| ATATGGTATGGACGCAGAAT+TGG | + | chr7.4:4971859-4971878 | None:intergenic | 40.0% | |
| ATGCAAACTTACCCATCCAA+AGG | + | chr7.4:4969497-4969516 | None:intergenic | 40.0% | |
| ATTCAAAGGCTCAGATCTCA+AGG | + | chr7.4:4969573-4969592 | None:intergenic | 40.0% | |
| CACTTCTTATCCTACGAACA+TGG | + | chr7.4:4968820-4968839 | None:intergenic | 40.0% | |
| CATAAAAAGTGAGACTCACC+TGG | + | chr7.4:4971466-4971485 | None:intergenic | 40.0% | |
| CTAAGGGGAAATACAAGGAT+GGG | - | chr7.4:4969811-4969830 | MS.gene072612:CDS | 40.0% | |
| CTGTTTCAGCTATGAAGCTT+GGG | - | chr7.4:4969346-4969365 | MS.gene072612:intron | 40.0% | |
| CTTGAGAAATAGAAAACGGG+AGG | + | chr7.4:4970955-4970974 | None:intergenic | 40.0% | |
| GAACTTGGAAGGTCAAAATG+GGG | - | chr7.4:4968156-4968175 | MS.gene072612:intron | 40.0% | |
| GCTCCAGCATATTCTTTGTA+TGG | + | chr7.4:4971362-4971381 | None:intergenic | 40.0% | |
| GTCAGGGTGAACTTAGATTA+CGG | + | chr7.4:4969235-4969254 | None:intergenic | 40.0% | |
| GTTCTTTACAACCACAGTGA+AGG | - | chr7.4:4971618-4971637 | MS.gene072612:intron | 40.0% | |
| GTTCTTTCTTGCTGCAAAGT+CGG | - | chr7.4:4971241-4971260 | MS.gene072612:CDS | 40.0% | |
| TAGATAGAGTCCATGTTCGT+AGG | - | chr7.4:4968807-4968826 | MS.gene072612:intron | 40.0% | |
| TATGCTGGAGCTAATATAGG+TGG | - | chr7.4:4971371-4971390 | MS.gene072612:intron | 40.0% | |
| TCAAACAACACAAATGGTGC+AGG | + | chr7.4:4970816-4970835 | None:intergenic | 40.0% | |
| TCATACGTAAGTGCAAGCAA+GGG | - | chr7.4:4969730-4969749 | MS.gene072612:CDS | 40.0% | |
| TCTTTACAACCACAGTGAAG+GGG | - | chr7.4:4971620-4971639 | MS.gene072612:intron | 40.0% | |
| TGCACCAACAGTCTCTTATT+AGG | - | chr7.4:4968288-4968307 | MS.gene072612:CDS | 40.0% | |
| TGTATTCCTTACTTACTGGC+AGG | - | chr7.4:4969989-4970008 | MS.gene072612:CDS | 40.0% | |
| TTACGCTAAGGGGAAATACA+AGG | - | chr7.4:4969806-4969825 | MS.gene072612:CDS | 40.0% | |
| TTCATACGTAAGTGCAAGCA+AGG | - | chr7.4:4969729-4969748 | MS.gene072612:CDS | 40.0% | |
| TTCCTCCTATACCTTTGGAT+GGG | - | chr7.4:4969483-4969502 | MS.gene072612:intron | 40.0% | |
| TTCTTTCTTGCTGCAAAGTC+GGG | - | chr7.4:4971242-4971261 | MS.gene072612:CDS | 40.0% | |
| TTGCTTTCCTCCTATACCTT+TGG | - | chr7.4:4969478-4969497 | MS.gene072612:intron | 40.0% | |
| TTGTATAGTTTAGCCCGTCA+AGG | - | chr7.4:4970514-4970533 | MS.gene072612:intron | 40.0% | |
| TTTCCTCCTATACCTTTGGA+TGG | - | chr7.4:4969482-4969501 | MS.gene072612:intron | 40.0% | |
| ! | AAGAAGGAACAAGGAAGTAC+AGG | - | chr7.4:4971643-4971662 | MS.gene072612:intron | 40.0% |
| ! | ACAGTGACACATTTAGGGTT+AGG | + | chr7.4:4968087-4968106 | None:intergenic | 40.0% |
| ! | ACTTACCCATCCAAAGGTAT+AGG | + | chr7.4:4969491-4969510 | None:intergenic | 40.0% |
| ! | CATTGTTCGCATCGTTTTCA+TGG | - | chr7.4:4967909-4967928 | MS.gene072612:CDS | 40.0% |
| !! | AACTTTGGGACTGGATTGAA+TGG | + | chr7.4:4969951-4969970 | None:intergenic | 40.0% |
| !! | ACAAGGGAGTACTAAACAGA+TGG | - | chr7.4:4970745-4970764 | MS.gene072612:intron | 40.0% |
| !! | ATTGTTTTACGTGGCATGCA+AGG | - | chr7.4:4969914-4969933 | MS.gene072612:CDS | 40.0% |
| !! | CTCCCGTTTTCTATTTCTCA+AGG | - | chr7.4:4970953-4970972 | MS.gene072612:intron | 40.0% |
| !! | TGACGGGCTAAACTATACAA+TGG | + | chr7.4:4970514-4970533 | None:intergenic | 40.0% |
| !! | TGCTCTTGCATTGTTTTACG+TGG | - | chr7.4:4969905-4969924 | MS.gene072612:CDS | 40.0% |
| !!! | GAAAGGGTTTTGAACTTGGA+AGG | - | chr7.4:4968145-4968164 | MS.gene072612:intron | 40.0% |
| !!! | GGTTGAAAGGGTTTTGAACT+TGG | - | chr7.4:4968141-4968160 | MS.gene072612:intron | 40.0% |
| AAAAAGTGAGACTCACCTGG+TGG | + | chr7.4:4971463-4971482 | None:intergenic | 45.0% | |
| AGAACAGAGCAAAGCCTTGA+CGG | + | chr7.4:4970531-4970550 | None:intergenic | 45.0% | |
| AGGAACTTCTTCTGGGTAAC+TGG | + | chr7.4:4971910-4971929 | None:intergenic | 45.0% | |
| AGTTGAACCATGAAACAGGG+AGG | + | chr7.4:4968615-4968634 | None:intergenic | 45.0% | |
| ATGTAGTGTGTGCTGGAATG+AGG | + | chr7.4:4970598-4970617 | None:intergenic | 45.0% | |
| ATTGGACACATCCACAAGCA+AGG | + | chr7.4:4971841-4971860 | None:intergenic | 45.0% | |
| CAAGTCATCAGACAGACTGA+CGG | + | chr7.4:4969458-4969477 | None:intergenic | 45.0% | |
| CAGGACAGACAACAATTGTC+AGG | + | chr7.4:4969252-4969271 | None:intergenic | 45.0% | |
| CTGTTGGTGCAGAACCAAAT+AGG | + | chr7.4:4968279-4968298 | None:intergenic | 45.0% | |
| GAGATGCTTATTGCTGCAGT+GGG | - | chr7.4:4971320-4971339 | MS.gene072612:intron | 45.0% | |
| GCTAAGGGGAAATACAAGGA+TGG | - | chr7.4:4969810-4969829 | MS.gene072612:CDS | 45.0% | |
| TCAACTTCAAAGCATGCCCA+AGG | + | chr7.4:4971418-4971437 | None:intergenic | 45.0% | |
| TCACGAACGTTTGTTCCGAT+TGG | - | chr7.4:4971666-4971685 | MS.gene072612:intron | 45.0% | |
| TCACTTTGTCTAGCATGGGT+TGG | - | chr7.4:4969386-4969405 | MS.gene072612:intron | 45.0% | |
| TGAAAGCCGCGGTAAAACAA+GGG | + | chr7.4:4968477-4968496 | None:intergenic | 45.0% | |
| TGAGATGCTTATTGCTGCAG+TGG | - | chr7.4:4971319-4971338 | MS.gene072612:intron | 45.0% | |
| TTACCATGATACAGTCCACC+AGG | - | chr7.4:4971445-4971464 | MS.gene072612:intron | 45.0% | |
| TTATCCATCTCTGGGCCAAT+CGG | + | chr7.4:4971684-4971703 | None:intergenic | 45.0% | |
| TTCCCACTCTTGTGATTGCA+CGG | + | chr7.4:4968966-4968985 | None:intergenic | 45.0% | |
| TTGAAAGCCGCGGTAAAACA+AGG | + | chr7.4:4968478-4968497 | None:intergenic | 45.0% | |
| ! | ATCGCTTTCTTTTGCACCGT+CGG | - | chr7.4:4967814-4967833 | MS.gene072612:CDS | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr7.4:4969170-4969189 | None:intergenic | 45.0% |
| ! | CTTATCCCACTAAGTGGGTT+CGG | + | chr7.4:4969165-4969184 | None:intergenic | 45.0% |
| ! | GCATCAGAGTTTGAAGCATC+AGG | + | chr7.4:4971807-4971826 | None:intergenic | 45.0% |
| ! | TACCCATCCAAAGGTATAGG+AGG | + | chr7.4:4969488-4969507 | None:intergenic | 45.0% |
| ! | TCGCATCGTTTTCATGGTTC+CGG | - | chr7.4:4967915-4967934 | MS.gene072612:CDS | 45.0% |
| ! | TCTCAAGTTGCTATCAGGGT+GGG | - | chr7.4:4970462-4970481 | MS.gene072612:intron | 45.0% |
| ! | TTCTCAAGTTGCTATCAGGG+TGG | - | chr7.4:4970461-4970480 | MS.gene072612:intron | 45.0% |
| !! | CCTGTCACTTTGTCTAGCAT+GGG | - | chr7.4:4969382-4969401 | MS.gene072612:intron | 45.0% |
| !! | TCCTGTCACTTTGTCTAGCA+TGG | - | chr7.4:4969381-4969400 | MS.gene072612:intron | 45.0% |
| !!! | TCTTGTCCCTTGTTTTACCG+CGG | - | chr7.4:4968468-4968487 | MS.gene072612:CDS | 45.0% |
| !! | TAAGTAAAAAAAAAAAAAAA+AGG | + | chr7.4:4970709-4970728 | None:intergenic | 5.0% |
| !!! | AATAAAAACTAATTTTTATA+TGG | - | chr7.4:4970169-4970188 | MS.gene072612:intron | 5.0% |
| !!! | TTTTTAAAAAAAAAAAAAAC+AGG | + | chr7.4:4969620-4969639 | None:intergenic | 5.0% |
| AACCACAGTGAAGGGGAAGA+AGG | - | chr7.4:4971627-4971646 | MS.gene072612:intron | 50.0% | |
| ACCCGTGCAATCACAAGAGT+GGG | - | chr7.4:4968961-4968980 | MS.gene072612:intron | 50.0% | |
| AGAGGCTAGGATGACACATG+TGG | - | chr7.4:4969648-4969667 | MS.gene072612:intron | 50.0% | |
| AGGCAGCGAACCAGAATTTG+AGG | + | chr7.4:4971787-4971806 | None:intergenic | 50.0% | |
| CAGCAGATAAAGCCGGTCTT+AGG | - | chr7.4:4971931-4971950 | MS.gene072612:CDS | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr7.4:4969168-4969187 | MS.gene072612:intron | 50.0% | |
| CCCATGCTAGACAAAGTGAC+AGG | + | chr7.4:4969385-4969404 | None:intergenic | 50.0% | |
| CGAACCCACTTAGTGGGATA+AGG | - | chr7.4:4969163-4969182 | MS.gene072612:intron | 50.0% | |
| CTGCTGCAGGAACTTCTTCT+GGG | + | chr7.4:4971917-4971936 | None:intergenic | 50.0% | |
| GAACAGAGCAAAGCCTTGAC+GGG | + | chr7.4:4970530-4970549 | None:intergenic | 50.0% | |
| GCTAATATAGGTGGATCCCG+TGG | - | chr7.4:4971380-4971399 | MS.gene072612:intron | 50.0% | |
| GGAAGGTCAAAATGGGGTGA+AGG | - | chr7.4:4968162-4968181 | MS.gene072612:intron | 50.0% | |
| GGCAGCGAACCAGAATTTGA+GGG | + | chr7.4:4971786-4971805 | None:intergenic | 50.0% | |
| GTGAAGGGGAAGAAGGAACA+AGG | - | chr7.4:4971634-4971653 | MS.gene072612:intron | 50.0% | |
| GTGCAATCACAAGAGTGGGA+AGG | - | chr7.4:4968965-4968984 | MS.gene072612:intron | 50.0% | |
| GTTCCTGCAGCAGATAAAGC+CGG | - | chr7.4:4971924-4971943 | MS.gene072612:CDS | 50.0% | |
| TACCCGTGCAATCACAAGAG+TGG | - | chr7.4:4968960-4968979 | MS.gene072612:intron | 50.0% | |
| TCCCACTCTTGTGATTGCAC+GGG | + | chr7.4:4968965-4968984 | None:intergenic | 50.0% | |
| TCTGCTGCAGGAACTTCTTC+TGG | + | chr7.4:4971918-4971937 | None:intergenic | 50.0% | |
| TGCAAAGTCGGGATTCATCC+AGG | - | chr7.4:4971253-4971272 | MS.gene072612:CDS | 50.0% | |
| TGTGTGCTGGAATGAGGACA+CGG | + | chr7.4:4970592-4970611 | None:intergenic | 50.0% | |
| TTCCTTCTTCCCCTTCACTG+TGG | + | chr7.4:4971632-4971651 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr7.4:4969171-4969190 | None:intergenic | 50.0% |
| ! | GGGATAAGGCTTGGTTGTTG+TGG | - | chr7.4:4969177-4969196 | MS.gene072612:intron | 50.0% |
| !! | CTTTGTCTAGCATGGGTTGG+TGG | - | chr7.4:4969389-4969408 | MS.gene072612:intron | 50.0% |
| !! | TCACCTGGTGGACTGTATCA+TGG | + | chr7.4:4971451-4971470 | None:intergenic | 50.0% |
| AAGCAGCTTCGTCAGCATCC+TGG | + | chr7.4:4971274-4971293 | None:intergenic | 55.0% | |
| AAGGCTAGCGGTCAAACCAC+GGG | + | chr7.4:4971399-4971418 | None:intergenic | 55.0% | |
| AGCCAAAGCGATTGCACCGA+CGG | + | chr7.4:4967833-4967852 | None:intergenic | 55.0% | |
| ATGCAGCCGAACCCACTTAG+TGG | - | chr7.4:4969156-4969175 | MS.gene072612:intron | 55.0% | |
| CAAAGCATGCCCAAGGCTAG+CGG | + | chr7.4:4971411-4971430 | None:intergenic | 55.0% | |
| CAAGGCTAGCGGTCAAACCA+CGG | + | chr7.4:4971400-4971419 | None:intergenic | 55.0% | |
| GACACATGTGGCCCACTGTA+TGG | - | chr7.4:4969660-4969679 | MS.gene072612:intron | 55.0% | |
| TGCAGCCGAACCCACTTAGT+GGG | - | chr7.4:4969157-4969176 | MS.gene072612:intron | 55.0% | |
| ! | ACTAAGTGGGTTCGGCTGCA+TGG | + | chr7.4:4969157-4969176 | None:intergenic | 55.0% |
| ! | AGACCGGCTTTATCTGCTGC+AGG | + | chr7.4:4971930-4971949 | None:intergenic | 55.0% |
| ! | TGTTCCGATTGGCCCAGAGA+TGG | - | chr7.4:4971677-4971696 | MS.gene072612:intron | 55.0% |
| !! | GTGGTTTGACCGCTAGCCTT+GGG | - | chr7.4:4971399-4971418 | MS.gene072612:intron | 55.0% |
| CACCGTCGGTGCAATCGCTT+TGG | - | chr7.4:4967828-4967847 | MS.gene072612:CDS | 60.0% | |
| ! | CGTGGTTTGACCGCTAGCCT+TGG | - | chr7.4:4971398-4971417 | MS.gene072612:intron | 60.0% |
| !! | CTAGCATGGGTTGGTGGTCC+TGG | - | chr7.4:4969395-4969414 | MS.gene072612:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 4967781 | 4971956 | 4967781 | ID=MS.gene072612 |
| chr7.4 | mRNA | 4967781 | 4971956 | 4967781 | ID=MS.gene072612.t1;Parent=MS.gene072612 |
| chr7.4 | exon | 4971801 | 4971956 | 4971801 | ID=MS.gene072612.t1.exon1;Parent=MS.gene072612.t1 |
| chr7.4 | CDS | 4971801 | 4971956 | 4971801 | ID=cds.MS.gene072612.t1;Parent=MS.gene072612.t1 |
| chr7.4 | exon | 4971215 | 4971288 | 4971215 | ID=MS.gene072612.t1.exon2;Parent=MS.gene072612.t1 |
| chr7.4 | CDS | 4971215 | 4971288 | 4971215 | ID=cds.MS.gene072612.t1;Parent=MS.gene072612.t1 |
| chr7.4 | exon | 4970233 | 4970382 | 4970233 | ID=MS.gene072612.t1.exon3;Parent=MS.gene072612.t1 |
| chr7.4 | CDS | 4970233 | 4970382 | 4970233 | ID=cds.MS.gene072612.t1;Parent=MS.gene072612.t1 |
| chr7.4 | exon | 4969727 | 4970012 | 4969727 | ID=MS.gene072612.t1.exon4;Parent=MS.gene072612.t1 |
| chr7.4 | CDS | 4969727 | 4970012 | 4969727 | ID=cds.MS.gene072612.t1;Parent=MS.gene072612.t1 |
| chr7.4 | exon | 4968271 | 4968504 | 4968271 | ID=MS.gene072612.t1.exon5;Parent=MS.gene072612.t1 |
| chr7.4 | CDS | 4968271 | 4968504 | 4968271 | ID=cds.MS.gene072612.t1;Parent=MS.gene072612.t1 |
| chr7.4 | exon | 4967781 | 4968143 | 4967781 | ID=MS.gene072612.t1.exon6;Parent=MS.gene072612.t1 |
| chr7.4 | CDS | 4967781 | 4968143 | 4967781 | ID=cds.MS.gene072612.t1;Parent=MS.gene072612.t1 |
| Gene Sequence |
| Protein sequence |
