AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene072892

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072892.t1 MTR_3g107280 97.192 641 18 0 1 641 1 641 0.0 1250
MS.gene072892.t1 MTR_1g012520 66.512 645 208 4 1 640 1 642 0.0 847
MS.gene072892.t1 MTR_4g114640 55.000 600 266 3 44 640 34 632 0.0 601
MS.gene072892.t1 MTR_4g114650 49.367 632 271 7 23 641 4 599 0.0 551
MS.gene072892.t1 MTR_4g114650 50.746 603 256 5 44 641 88 654 0.0 551
MS.gene072892.t1 MTR_4g114650 50.746 603 256 5 44 641 37 603 0.0 551
MS.gene072892.t1 MTR_2g021030 25.497 553 355 15 71 579 11 550 4.30e-36 144
MS.gene072892.t1 MTR_2g021030 28.099 484 235 16 226 631 127 575 5.50e-26 113
MS.gene072892.t1 MTR_2g021030 27.574 272 172 3 172 419 305 575 2.87e-23 105
MS.gene072892.t1 MTR_2g021030 26.296 270 178 5 143 406 334 588 1.16e-18 90.5
MS.gene072892.t1 MTR_4g013255 27.364 497 303 17 137 605 133 599 2.05e-28 121
MS.gene072892.t1 MTR_4g013255 25.460 326 208 8 174 499 320 610 1.46e-20 96.7
MS.gene072892.t1 MTR_4g013255 26.199 271 164 6 135 404 336 571 9.52e-16 81.3
MS.gene072892.t1 MTR_1g114610 27.411 394 256 12 69 445 18 398 2.76e-27 115
MS.gene072892.t1 MTR_1g114610 23.423 333 223 5 304 634 95 397 1.03e-16 83.2
MS.gene072892.t1 MTR_1g114610 28.352 261 153 7 140 372 145 399 2.87e-15 79.0
MS.gene072892.t1 MTR_2g021030 27.488 422 261 15 71 466 11 413 4.67e-25 109
MS.gene072892.t1 MTR_2g021030 25.472 318 205 9 330 622 127 437 2.91e-20 94.7
MS.gene072892.t1 MTR_2g021030 25.738 237 146 5 174 410 231 437 3.58e-16 82.0
MS.gene072892.t1 MTR_2g021030 36.522 115 73 0 172 286 305 419 1.29e-15 80.1
MS.gene072892.t1 MTR_7g112570 25.909 440 288 13 169 595 190 604 7.38e-24 106
MS.gene072892.t1 MTR_7g112570 25.105 474 264 17 205 623 94 531 1.08e-19 93.6
MS.gene072892.t1 MTR_7g112570 26.450 431 277 12 169 571 190 608 9.36e-24 106
MS.gene072892.t1 MTR_7g112570 25.105 474 264 17 205 623 94 531 1.24e-19 93.6
MS.gene072892.t1 MTR_7g112570 23.473 311 207 5 174 459 350 654 3.68e-16 82.8
MS.gene072892.t1 MTR_7g112570 26.303 422 276 12 169 577 190 589 1.82e-23 105
MS.gene072892.t1 MTR_7g112570 25.105 474 264 17 205 623 94 531 1.33e-19 93.6
MS.gene072892.t1 MTR_1g054625 30.364 247 155 9 343 585 107 340 3.97e-20 92.8
MS.gene072892.t1 MTR_1g054625 27.119 236 159 5 142 372 89 316 9.80e-14 73.6
MS.gene072892.t1 MTR_1g054625 26.016 246 163 6 172 407 90 326 1.24e-12 70.1
MS.gene072892.t1 MTR_1g054625 22.924 301 173 7 213 484 79 349 8.97e-11 64.3
MS.gene072892.t1 MTR_8g028140 26.984 378 238 10 66 423 17 376 5.80e-20 92.8
MS.gene072892.t1 MTR_8g028140 21.884 361 212 7 191 544 66 363 2.60e-11 66.2
MS.gene072892.t1 MTR_1g054625 30.041 243 153 9 347 585 14 243 5.41e-19 87.4
MS.gene072892.t1 MTR_1g054625 23.904 251 158 5 160 407 9 229 1.91e-14 73.9
MS.gene072892.t1 MTR_1g054625 25.668 187 131 3 330 515 51 230 2.57e-11 64.7
MS.gene072892.t1 MTR_8g028140 28.058 278 174 6 159 423 32 296 5.75e-18 85.9
MS.gene072892.t1 MTR_8g028140 24.749 299 174 8 266 544 16 283 7.34e-11 64.3
MS.gene072892.t1 MTR_3g088895 25.926 216 107 3 196 411 111 273 2.98e-16 81.3
MS.gene072892.t1 MTR_1g015450 24.270 445 227 15 174 580 327 699 4.64e-16 82.8
MS.gene072892.t1 MTR_4g019320 20.755 424 292 8 178 577 122 525 5.10e-16 82.0
MS.gene072892.t1 MTR_1g029500 23.404 282 147 4 196 461 98 326 8.95e-16 79.7
MS.gene072892.t1 MTR_1g029500 31.507 146 73 3 141 262 127 269 9.55e-12 67.4
MS.gene072892.t1 MTR_4g009030 25.236 424 272 16 173 571 127 530 2.15e-15 80.1
MS.gene072892.t1 MTR_4g009030 22.393 585 362 20 68 633 3 514 3.18e-13 73.2
MS.gene072892.t1 MTR_1g015480 23.326 433 222 13 186 580 157 517 3.30e-14 76.6
MS.gene072892.t1 MTR_1g015480 23.044 473 275 16 173 577 164 615 2.62e-11 67.4
MS.gene072892.t1 MTR_4g130620 30.726 179 108 5 227 403 102 266 1.47e-13 72.4
MS.gene072892.t1 MTR_5g095830 22.222 459 269 13 178 593 149 562 1.10e-12 71.6
MS.gene072892.t1 MTR_4g133640 21.769 441 289 11 178 576 135 561 2.85e-12 70.1
MS.gene072892.t1 MTR_4g133640 23.303 442 268 16 160 553 172 590 5.29e-11 66.2
MS.gene072892.t1 MTR_1g018790 23.978 367 199 12 225 580 137 434 1.22e-11 68.2
MS.gene072892.t1 MTR_3g006050 24.332 374 214 11 200 514 192 555 6.49e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072892.t1 AT2G25490 56.406 640 266 6 1 640 1 627 0.0 675
MS.gene072892.t1 AT5G25350 51.944 643 287 6 1 641 1 623 0.0 611
MS.gene072892.t1 AT4G15475 27.835 582 379 19 71 641 11 562 1.96e-47 177
MS.gene072892.t1 AT4G15475 27.762 353 247 6 174 526 231 575 2.46e-31 129
MS.gene072892.t1 AT4G15475 26.531 343 241 6 123 460 252 588 1.45e-29 124
MS.gene072892.t1 AT5G27920 28.859 447 276 16 173 604 158 577 3.47e-28 120
MS.gene072892.t1 AT5G27920 26.351 296 185 7 200 495 338 600 5.36e-14 75.9
MS.gene072892.t1 AT5G27920 25.381 394 251 13 265 627 65 446 4.27e-12 69.7
MS.gene072892.t1 AT5G23340 28.881 277 189 6 304 577 85 356 5.00e-25 108
MS.gene072892.t1 AT5G23340 25.201 373 261 11 69 433 8 370 5.22e-23 102
MS.gene072892.t1 AT5G23340 25.442 283 181 3 349 630 76 329 1.39e-16 82.8
MS.gene072892.t1 AT5G23340 28.652 178 124 3 456 632 103 278 5.50e-14 74.7
MS.gene072892.t1 AT5G01720 23.232 396 249 6 176 548 241 604 2.13e-23 105
MS.gene072892.t1 AT5G01720 26.096 479 310 15 174 623 85 548 4.31e-19 92.0
MS.gene072892.t1 AT5G01720 22.593 270 175 6 173 415 315 577 7.68e-14 75.5
MS.gene072892.t1 AT1G77000 25.000 216 109 2 196 411 100 262 8.82e-16 79.7
MS.gene072892.t1 AT1G77000 25.000 216 109 2 196 411 100 262 8.82e-16 79.7
MS.gene072892.t1 AT1G21410 24.537 216 110 2 196 411 100 262 8.90e-16 79.7
MS.gene072892.t1 AT1G21410 24.537 216 110 2 196 411 100 262 8.90e-16 79.7
MS.gene072892.t1 AT1G55590 23.767 223 165 3 172 392 296 515 2.47e-14 76.6
MS.gene072892.t1 AT3G58530 26.866 268 159 7 343 607 109 342 3.36e-14 75.1
MS.gene072892.t1 AT3G58530 23.140 242 148 4 152 393 102 305 3.04e-12 68.9
MS.gene072892.t1 AT4G33210 23.827 533 302 20 128 616 321 793 7.28e-14 75.9
MS.gene072892.t1 AT3G07550 25.193 389 242 9 61 423 8 373 4.02e-13 72.0
MS.gene072892.t1 AT3G07550 25.193 389 242 9 61 423 8 373 4.02e-13 72.0
MS.gene072892.t1 AT1G47056 27.682 289 149 9 345 580 130 411 6.04e-13 72.0
MS.gene072892.t1 AT1G47056 33.523 176 100 8 117 286 244 408 8.28e-13 71.6
MS.gene072892.t1 AT1G47056 23.210 461 292 17 43 490 15 426 2.86e-11 66.6
MS.gene072892.t1 AT4G07400 38.211 123 73 3 160 282 344 463 9.45e-12 68.6
MS.gene072892.t1 AT1G80630 23.000 400 239 12 198 567 148 508 2.83e-11 67.0
MS.gene072892.t1 AT3G07550 24.936 389 216 11 61 423 8 346 2.86e-11 66.2
MS.gene072892.t1 AT2G06040 24.812 266 194 4 335 598 473 734 8.34e-11 65.9

Find 158 sgRNAs with CRISPR-Local

Find 198 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTGAAGTCTTTCACTCTT+TGG 0.100387 3.2:+87237471 MS.gene072892:CDS
GATTACTCACTAGCAGTTAT+TGG 0.193905 3.2:+87237824 MS.gene072892:CDS
TGCCATAGGATTACCCAATT+TGG 0.212481 3.2:+87238127 MS.gene072892:CDS
TGACACCGGCAACCCCAAAT+TGG 0.224942 3.2:-87238141 None:intergenic
TCTGAAGTCTTTCACTCTTT+GGG 0.233451 3.2:+87237472 MS.gene072892:CDS
CAATCTGGATGTACTTTCTT+TGG 0.236470 3.2:+87238657 MS.gene072892:CDS
CTTGGAGTGCTAAACCTTAA+TGG 0.242738 3.2:+87238505 MS.gene072892:CDS
TCGAAGCTTGGAGGGGAAAA+AGG 0.250888 3.2:+87237310 MS.gene072892:CDS
GTTGCTGCAGATTTCATTCT+TGG 0.268042 3.2:-87237228 None:intergenic
GCCATAGGATTACCCAATTT+GGG 0.271797 3.2:+87238128 MS.gene072892:CDS
GTCCTTCAGGCAACCTTCTA+AGG 0.271825 3.2:-87237145 None:intergenic
TGCCCTGGAGTAACAGATAT+TGG 0.295544 3.2:+87237971 MS.gene072892:CDS
ACACAATCTCGAGGAGGATT+AGG 0.296188 3.2:+87237368 MS.gene072892:CDS
AAACCTTAATGGTTGTAAAA+AGG 0.296888 3.2:+87238516 MS.gene072892:CDS
ATCTGCAGCAACGCAAGTTC+TGG 0.313753 3.2:+87237239 MS.gene072892:CDS
GACGGTGACAATCAAGAATT+TGG 0.313887 3.2:+87237269 MS.gene072892:CDS
ATTGATACGGACCTTAGATT+TGG 0.325991 3.2:-87237701 None:intergenic
TTCACTGCTTCAGAGGTCTA+AGG 0.330025 3.2:+87238396 MS.gene072892:CDS
CAACTAACGTCGCTCACAAT+TGG 0.335014 3.2:+87237944 MS.gene072892:CDS
TAATGGATGCTGAACATAAT+AGG 0.341815 3.2:-87237763 None:intergenic
AATTGTAGGCTCACAATTGA+TGG 0.346716 3.2:-87238097 None:intergenic
CTTCAGTGTCTTGAATTGAT+TGG 0.348304 3.2:+87238343 MS.gene072892:CDS
TCAGAGGTCTAAGGCCAGTT+TGG 0.348388 3.2:+87238405 MS.gene072892:CDS
TTCTTTGGCAGGTTGCTCAT+TGG 0.352209 3.2:+87238672 MS.gene072892:CDS
ATTACCCAATTTGGGGTTGC+CGG 0.354313 3.2:+87238136 MS.gene072892:CDS
ATGTCACCGAGAAAGGATTC+TGG 0.362806 3.2:+87237894 MS.gene072892:CDS
TAGATTAACATTACCCAAAC+TGG 0.367200 3.2:-87238419 None:intergenic
TTAGGGAAGCTTTCAATTCA+TGG 0.367968 3.2:+87237386 MS.gene072892:CDS
AAGCTCCTATCTTGTCCTTC+AGG 0.374082 3.2:-87237158 None:intergenic
AATCCTTTCTCGGTGACATT+TGG 0.374117 3.2:-87237890 None:intergenic
CTAGCAGTTATTGGACAATA+TGG 0.374694 3.2:+87237833 MS.gene072892:CDS
GAAAGTTGTGTCCAAATCTA+AGG 0.379486 3.2:+87237690 MS.gene072892:CDS
CTCACAATTGGGCTGTGCCC+TGG 0.383441 3.2:+87237956 MS.gene072892:CDS
AAGTTGCATTGTTCGACTCT+TGG 0.384757 3.2:+87238487 MS.gene072892:CDS
TCTAAAGTTCTCAGCTTTAC+CGG 0.389616 3.2:+87236300 MS.gene072892:CDS
CAGAGGTCTAAGGCCAGTTT+GGG 0.390240 3.2:+87238406 MS.gene072892:CDS
AATGAAGGTCTACATGCTAT+TGG 0.392573 3.2:+87237668 MS.gene072892:CDS
CTTCCAAATGTCACCGAGAA+AGG 0.393704 3.2:+87237887 MS.gene072892:CDS
AAGAAGAGACCCACCTCCTT+CGG 0.393729 3.2:-87236975 None:intergenic
GCCCTGGAGTAACAGATATT+GGG 0.394824 3.2:+87237972 MS.gene072892:CDS
GTGGGTCTCTTCTTGTCTCT+TGG 0.395358 3.2:+87236984 MS.gene072892:CDS
GACCCACCTCCTTCGGGTTA+AGG 0.396263 3.2:-87236968 None:intergenic
GCCTCTTTGAGATCCTTAGA+AGG 0.399791 3.2:+87237132 MS.gene072892:CDS
CTGTCCTGGAGTTCGTGATC+AGG 0.403623 3.2:+87237730 MS.gene072892:CDS
CACAATCTCGAGGAGGATTA+GGG 0.405866 3.2:+87237369 MS.gene072892:CDS
CTGGATGTACTTTCTTTGGC+AGG 0.406723 3.2:+87238661 MS.gene072892:CDS
CTTGAATTGATTGGACTTGA+GGG 0.412726 3.2:+87238352 MS.gene072892:CDS
ATCAATTGTGAGCCTACAAT+TGG 0.415296 3.2:+87238099 MS.gene072892:CDS
TACCAACTCCAGGGCAGTTA+CGG 0.416240 3.2:-87238282 None:intergenic
AAAATTGAAGGCTCTTACTC+TGG 0.417528 3.2:+87238180 MS.gene072892:CDS
TATGGCACTCTTCCAATTGT+AGG 0.418212 3.2:-87238111 None:intergenic
CACAATTGATGGAGCAGCCT+TGG 0.432002 3.2:-87238086 None:intergenic
AGAAGAGACCCACCTCCTTC+GGG 0.438149 3.2:-87236974 None:intergenic
AACTAACGTCGCTCACAATT+GGG 0.438220 3.2:+87237945 MS.gene072892:CDS
CTTACTCTGGTAAGCTGCTA+CGG 0.439956 3.2:+87238193 MS.gene072892:CDS
ACAAGCTTGTGGAACATCTC+TGG 0.440119 3.2:+87238791 MS.gene072892:CDS
GTTCGTGATCAGGGAATTGC+TGG 0.441466 3.2:+87237740 MS.gene072892:CDS
CATCACCCAGAATCCTTTCT+CGG 0.442853 3.2:-87237900 None:intergenic
GGCTTGATCGAGATTGCTAA+TGG 0.449362 3.2:+87237518 MS.gene072892:CDS
TGCATCGGTGATTGCACACT+CGG 0.454668 3.2:-87238602 None:intergenic
ATCGATAACTCAGTCAGATT+CGG 0.457316 3.2:-87237623 None:intergenic
ACATCAGTCAAGGCACGATC+TGG 0.458394 3.2:-87237416 None:intergenic
AAACCGTGGTGCAAAATTGA+AGG 0.459034 3.2:+87238168 MS.gene072892:CDS
AATCAAGAATTTGGTGATGA+AGG 0.460069 3.2:+87237278 MS.gene072892:CDS
TGAACAGGACTCCACGAGTA+AGG 0.461905 3.2:-87238636 None:intergenic
GAGTGTGCAATCACCGATGC+AGG 0.462800 3.2:+87238604 MS.gene072892:CDS
GACACCGGCAACCCCAAATT+GGG 0.463002 3.2:-87238140 None:intergenic
ATCTCAAAGAGGCATTCATC+AGG 0.464081 3.2:-87237122 None:intergenic
GATCAAGCCTTTGTCACTAA+TGG 0.465229 3.2:-87237504 None:intergenic
TCGTGGAGTCCTGTTCAATC+TGG 0.467985 3.2:+87238642 MS.gene072892:CDS
TATTGGACAATATGGCTTTG+TGG 0.469637 3.2:+87237841 MS.gene072892:CDS
GGTTGCCTGAAGGACAAGAT+AGG 0.472680 3.2:+87237153 MS.gene072892:CDS
AGCCCAATATCTGTTACTCC+AGG 0.474848 3.2:-87237974 None:intergenic
GGATTCTGGGTGATGGGTAA+TGG 0.476172 3.2:+87237908 MS.gene072892:CDS
AATGTCCCATTTGACTTCAG+TGG 0.477222 3.2:+87237053 MS.gene072892:CDS
TTTCTCCACTGAAGTCAAAT+GGG 0.478494 3.2:-87237058 None:intergenic
TAGAAGCGTGAGCCAGCGCT+TGG 0.480253 3.2:-87237195 None:intergenic
AGGCTATCTTTCTCGAAGCT+TGG 0.481683 3.2:+87237298 MS.gene072892:CDS
TTATCAATCCGTAACTGCCC+TGG 0.487556 3.2:+87238274 MS.gene072892:CDS
TTGGGTAATGTTAATCTAAG+TGG 0.488310 3.2:+87238424 MS.gene072892:CDS
AAAGTACATCCAGATTGAAC+AGG 0.488581 3.2:-87238651 None:intergenic
GTCTGTAAGCATATTCTTGA+CGG 0.492252 3.2:-87237007 None:intergenic
CTATCTTTCTCGAAGCTTGG+AGG 0.492264 3.2:+87237301 MS.gene072892:CDS
GGGCTTGAAGCTGTAGGAAA+GGG 0.497092 3.2:+87237992 MS.gene072892:CDS
GGTCTCAAGGCAGTTGCTCA+TGG 0.502544 3.2:+87237440 MS.gene072892:CDS
CCCCAAATTGGGTAATCCTA+TGG 0.504344 3.2:-87238129 None:intergenic
TGTCACCGAGAAAGGATTCT+GGG 0.505645 3.2:+87237895 MS.gene072892:CDS
ACGTTAGTTGCTGCAGTGCA+TGG 0.507163 3.2:-87237931 None:intergenic
AAAGCCTTGTCAGAAATTGT+TGG 0.508372 3.2:-87237578 None:intergenic
ATCCGTAACTGCCCTGGAGT+TGG 0.514000 3.2:+87238280 MS.gene072892:CDS
CGAGAAAGGATTCTGGGTGA+TGG 0.515420 3.2:+87237901 MS.gene072892:CDS
GTGCTTCTGTATCCAAGCGC+TGG 0.517996 3.2:+87237183 MS.gene072892:CDS
CTTTCTCGGTGACATTTGGA+AGG 0.518084 3.2:-87237886 None:intergenic
AGAGTAAAATTACCAACTCC+AGG 0.518751 3.2:-87238292 None:intergenic
GGGATTTCTGCCCTTACTCG+TGG 0.522818 3.2:+87238625 MS.gene072892:CDS
GGTTTATTTCACTGCTTCAG+AGG 0.535734 3.2:+87238389 MS.gene072892:CDS
ATTGTCTGCAATTGCTGTCA+TGG 0.539140 3.2:-87238551 None:intergenic
TGAAGCAGTGAAATAAACCC+TGG 0.539869 3.2:-87238385 None:intergenic
AGACTAGCTGCCATTGCTGT+TGG 0.540189 3.2:+87237344 MS.gene072892:CDS
TGTCCTAGCATCGGTAATGA+AGG 0.540249 3.2:+87237653 MS.gene072892:CDS
TATCTTTCTCGAAGCTTGGA+GGG 0.544169 3.2:+87237302 MS.gene072892:CDS
AAATTGTTGGCAACTTGCAT+AGG 0.545096 3.2:-87237565 None:intergenic
GTCTGACATGGAGATACTGC+TGG 0.549571 3.2:-87238241 None:intergenic
CAACGCAAGTTCTGGAAACA+AGG 0.552191 3.2:+87237247 MS.gene072892:CDS
TCTTGAATTGATTGGACTTG+AGG 0.552643 3.2:+87238351 MS.gene072892:CDS
TTACTCTGGTAAGCTGCTAC+GGG 0.552800 3.2:+87238194 MS.gene072892:CDS
TGTCCTGGAGTTCGTGATCA+GGG 0.555690 3.2:+87237731 MS.gene072892:CDS
ATCTTTCTCGAAGCTTGGAG+GGG 0.555765 3.2:+87237303 MS.gene072892:CDS
GTGCATTTCTGTCAGACAAT+GGG 0.557102 3.2:+87238050 MS.gene072892:CDS
TAATGGTTGTCATCAGATAG+AGG 0.558248 3.2:+87237535 MS.gene072892:CDS
TGGGCTTGAAGCTGTAGGAA+AGG 0.558947 3.2:+87237991 MS.gene072892:CDS
CTTGACTGATGTAGGTCTCA+AGG 0.565875 3.2:+87237427 MS.gene072892:CDS
GTACCTTAACCCGAAGGAGG+TGG 0.567244 3.2:+87236965 MS.gene072892:CDS
AATTCAAGACACTGAAGCAT+AGG 0.567525 3.2:-87238337 None:intergenic
GAGTGAAAGACTTCAGAGAA+GGG 0.568710 3.2:-87237466 None:intergenic
GAGAAAGGATTCTGGGTGAT+GGG 0.569849 3.2:+87237902 MS.gene072892:CDS
TGCATCAATCTGACAGATGT+AGG 0.573775 3.2:+87238448 MS.gene072892:CDS
ATTCCCTGATCACGAACTCC+AGG 0.574036 3.2:-87237734 None:intergenic
GATATTGGGCTTGAAGCTGT+AGG 0.576495 3.2:+87237986 MS.gene072892:CDS
AGAGTGAAAGACTTCAGAGA+AGG 0.580309 3.2:-87237467 None:intergenic
TGTGCATTTCTGTCAGACAA+TGG 0.584416 3.2:+87238049 MS.gene072892:CDS
AAATTGGGTGATTCCCTCGA+GGG 0.585090 3.2:+87238724 MS.gene072892:CDS
AGATTGTGTGCCAACAGCAA+TGG 0.591886 3.2:-87237354 None:intergenic
GAACAGGACTCCACGAGTAA+GGG 0.593363 3.2:-87238635 None:intergenic
TTTCTCGGTGACATTTGGAA+GGG 0.597962 3.2:-87237885 None:intergenic
GTTGCTACCATTAGTGACAA+AGG 0.599127 3.2:+87237497 MS.gene072892:CDS
TACCTTAACCCGAAGGAGGT+GGG 0.599823 3.2:+87236966 MS.gene072892:CDS
CAAGGCTACCTGCTCAGAAG+AGG 0.600220 3.2:-87238825 None:intergenic
CCGCACAGTTAACAAGCTTG+TGG 0.604170 3.2:+87238780 MS.gene072892:CDS
GATCGTGCCTTGACTGATGT+AGG 0.605270 3.2:+87237419 MS.gene072892:CDS
CCATAGGATTACCCAATTTG+GGG 0.605745 3.2:+87238129 MS.gene072892:CDS
GTTGCCAACAATTTCTGACA+AGG 0.608947 3.2:+87237574 MS.gene072892:CDS
AAGGGCAGAAATCCCTGCAT+CGG 0.611779 3.2:-87238617 None:intergenic
ATTTCTGTCAGACAATGGGC+TGG 0.612009 3.2:+87238054 MS.gene072892:CDS
TACAATTGGAAGAGTGCCAT+AGG 0.616497 3.2:+87238113 MS.gene072892:CDS
CTTGAGGGAATAACAGACCC+AGG 0.616547 3.2:+87238367 MS.gene072892:CDS
ATCCTTAGAAGGTTGCCTGA+AGG 0.616856 3.2:+87237143 MS.gene072892:CDS
ATAGAGTCATGTCCTAGCAT+CGG 0.621372 3.2:+87237644 MS.gene072892:CDS
CGAACAATGCAACTTGACCA+TGG 0.623330 3.2:-87238479 None:intergenic
GAAGCAGTGAAATAAACCCT+GGG 0.624828 3.2:-87238384 None:intergenic
ACCACGGTTTAAAATGACAC+CGG 0.630252 3.2:-87238155 None:intergenic
ACCTTCTAAGGATCTCAAAG+AGG 0.631936 3.2:-87237133 None:intergenic
AGTGTGCAATCACCGATGCA+GGG 0.633058 3.2:+87238605 MS.gene072892:CDS
GCCCAATATCTGTTACTCCA+GGG 0.638985 3.2:-87237973 None:intergenic
AATGACGAAATTGTCTGACA+TGG 0.645410 3.2:-87238253 None:intergenic
GTCGATGTACCTTAACCCGA+AGG 0.647280 3.2:+87236959 MS.gene072892:CDS
CTTGAGACCTACATCAGTCA+AGG 0.649066 3.2:-87237426 None:intergenic
AGACCTTCATTACCGATGCT+AGG 0.654284 3.2:-87237656 None:intergenic
GAGTAAAATTACCAACTCCA+GGG 0.662405 3.2:-87238291 None:intergenic
GCAAGTTCTGGAAACAAGGA+CGG 0.662723 3.2:+87237251 MS.gene072892:CDS
GCATAGGACAGAGCTTCCCA+AGG 0.666207 3.2:-87238321 None:intergenic
TTGAGGGAATAACAGACCCA+GGG 0.669478 3.2:+87238368 MS.gene072892:CDS
CCACAAGCTTGTTAACTGTG+CGG 0.680303 3.2:-87238780 None:intergenic
GCTGTTGGCACACAATCTCG+AGG 0.687326 3.2:+87237359 MS.gene072892:CDS
AAAATTGGGTGATTCCCTCG+AGG 0.689356 3.2:+87238723 MS.gene072892:CDS
GATGTACCTTAACCCGAAGG+AGG 0.690412 3.2:+87236962 MS.gene072892:CDS
GTTGGCACACAATCTCGAGG+AGG 0.726557 3.2:+87237362 MS.gene072892:CDS
TGGGCTGGTATCGTTCACCA+AGG 0.727978 3.2:+87238069 MS.gene072892:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTCAATTTAATTTTTTTGTT+TGG + chr3.2:87236791-87236810 MS.gene072892:intron 15.0%
!!! TATGATTTCTATTTTAGTTT+TGG + chr3.2:87236464-87236483 MS.gene072892:intron 15.0%
!!! TTTTGAGATAGTATATAATT+TGG + chr3.2:87236547-87236566 MS.gene072892:intron 15.0%
!! TTATATAATACTCATTCATG+TGG + chr3.2:87236838-87236857 MS.gene072892:intron 20.0%
!!! AATTAAATCTACTTTTTTGG+TGG + chr3.2:87236488-87236507 MS.gene072892:intron 20.0%
!!! ACGATAAAAGATAATTTTGT+TGG + chr3.2:87236602-87236621 MS.gene072892:intron 20.0%
!!! AGTTGTTATATGTATTTTGT+GGG + chr3.2:87236626-87236645 MS.gene072892:intron 20.0%
!!! GGTAATTAAATCTACTTTTT+TGG + chr3.2:87236485-87236504 MS.gene072892:intron 20.0%
!!! TAGTTGTTATATGTATTTTG+TGG + chr3.2:87236625-87236644 MS.gene072892:intron 20.0%
! AAACCTTAATGGTTGTAAAA+AGG + chr3.2:87238516-87238535 MS.gene072892:CDS 25.0%
! TTCATGTTTCATCTGATTAT+TGG + chr3.2:87236339-87236358 MS.gene072892:intron 25.0%
!! ATATGTCTAGTTATGTGTTT+TGG + chr3.2:87236769-87236788 MS.gene072892:intron 25.0%
!! TTTTATATTTAATCCCTCGA+GGG - chr3.2:87238740-87238759 None:intergenic 25.0%
!! TTTTTATATTTAATCCCTCG+AGG - chr3.2:87238741-87238760 None:intergenic 25.0%
!!! AGGACAGTTTTTAATTGATA+CGG - chr3.2:87237717-87237736 None:intergenic 25.0%
!!! TGTCAGCTTTTTTAGAATAA+TGG - chr3.2:87237783-87237802 None:intergenic 25.0%
!!! TTGTCTGCTTTGAAAAAATT+GGG + chr3.2:87238709-87238728 MS.gene072892:CDS 25.0%
CTTAATGGTTGTAAAAAGGT+CGG + chr3.2:87238520-87238539 MS.gene072892:CDS 30.0%
GTATCAATTAAAAACTGTCC+TGG + chr3.2:87237716-87237735 MS.gene072892:CDS 30.0%
TAGATTAACATTACCCAAAC+TGG - chr3.2:87238422-87238441 None:intergenic 30.0%
TGCTCAAAATTCATTTGTGT+TGG + chr3.2:87236737-87236756 MS.gene072892:intron 30.0%
TTAATGGTTGTAAAAAGGTC+GGG + chr3.2:87238521-87238540 MS.gene072892:CDS 30.0%
TTGGGTAATGTTAATCTAAG+TGG + chr3.2:87238424-87238443 MS.gene072892:CDS 30.0%
! AGCTGAAAGTTTTTCACATT+TGG - chr3.2:87238022-87238041 None:intergenic 30.0%
! TAATGGATGCTGAACATAAT+AGG - chr3.2:87237766-87237785 None:intergenic 30.0%
!! AATCAAGAATTTGGTGATGA+AGG + chr3.2:87237278-87237297 MS.gene072892:CDS 30.0%
!! CTTGTCTGCTTTGAAAAAAT+TGG + chr3.2:87238708-87238727 MS.gene072892:CDS 30.0%
AAAATTGAAGGCTCTTACTC+TGG + chr3.2:87238180-87238199 MS.gene072892:CDS 35.0%
AAAGTACATCCAGATTGAAC+AGG - chr3.2:87238654-87238673 None:intergenic 35.0%
AAATTGTTGGCAACTTGCAT+AGG - chr3.2:87237568-87237587 None:intergenic 35.0%
AATGAAGGTCTACATGCTAT+TGG + chr3.2:87237668-87237687 MS.gene072892:CDS 35.0%
AATGACGAAATTGTCTGACA+TGG - chr3.2:87238256-87238275 None:intergenic 35.0%
AATTCAAGACACTGAAGCAT+AGG - chr3.2:87238340-87238359 None:intergenic 35.0%
AATTGTAGGCTCACAATTGA+TGG - chr3.2:87238100-87238119 None:intergenic 35.0%
AGAGTAAAATTACCAACTCC+AGG - chr3.2:87238295-87238314 None:intergenic 35.0%
ATCAATTGTGAGCCTACAAT+TGG + chr3.2:87238099-87238118 MS.gene072892:CDS 35.0%
ATCGATAACTCAGTCAGATT+CGG - chr3.2:87237626-87237645 None:intergenic 35.0%
ATTGATACGGACCTTAGATT+TGG - chr3.2:87237704-87237723 None:intergenic 35.0%
CAATCTGGATGTACTTTCTT+TGG + chr3.2:87238657-87238676 MS.gene072892:CDS 35.0%
CTAGCAGTTATTGGACAATA+TGG + chr3.2:87237833-87237852 MS.gene072892:CDS 35.0%
CTTCAGTGTCTTGAATTGAT+TGG + chr3.2:87238343-87238362 MS.gene072892:CDS 35.0%
CTTGAATTGATTGGACTTGA+GGG + chr3.2:87238352-87238371 MS.gene072892:CDS 35.0%
GAAAGTTGTGTCCAAATCTA+AGG + chr3.2:87237690-87237709 MS.gene072892:CDS 35.0%
GAACCAAATCAAAAGCTTAC+CGG - chr3.2:87236322-87236341 None:intergenic 35.0%
GAGTAAAATTACCAACTCCA+GGG - chr3.2:87238294-87238313 None:intergenic 35.0%
GATTACTCACTAGCAGTTAT+TGG + chr3.2:87237824-87237843 MS.gene072892:CDS 35.0%
GTCTGTAAGCATATTCTTGA+CGG - chr3.2:87237010-87237029 None:intergenic 35.0%
TAATGGTTGTAAAAAGGTCG+GGG + chr3.2:87238522-87238541 MS.gene072892:CDS 35.0%
TAATGGTTGTCATCAGATAG+AGG + chr3.2:87237535-87237554 MS.gene072892:CDS 35.0%
TCTTGAATTGATTGGACTTG+AGG + chr3.2:87238351-87238370 MS.gene072892:CDS 35.0%
TGAAAAACTTTCAGCTTCGT+AGG + chr3.2:87238026-87238045 MS.gene072892:CDS 35.0%
TGAGAAATCAAACACACACA+AGG - chr3.2:87236913-87236932 None:intergenic 35.0%
TTAGGGAAGCTTTCAATTCA+TGG + chr3.2:87237386-87237405 MS.gene072892:CDS 35.0%
TTGACTTCAGTGGAGAAAAA+TGG + chr3.2:87237063-87237082 MS.gene072892:CDS 35.0%
TTTCTCCACTGAAGTCAAAT+GGG - chr3.2:87237061-87237080 None:intergenic 35.0%
! AAAGCCTTGTCAGAAATTGT+TGG - chr3.2:87237581-87237600 None:intergenic 35.0%
! AATTTTACTCTCAACGTCCT+TGG + chr3.2:87238304-87238323 MS.gene072892:CDS 35.0%
! ATTTTACTCTCAACGTCCTT+GGG + chr3.2:87238305-87238324 MS.gene072892:CDS 35.0%
! CGACCTTTTTACAACCATTA+AGG - chr3.2:87238522-87238541 None:intergenic 35.0%
! GTGATGATTTTTGTACTGGA+AGG + chr3.2:87236937-87236956 MS.gene072892:CDS 35.0%
! TATTGGACAATATGGCTTTG+TGG + chr3.2:87237841-87237860 MS.gene072892:CDS 35.0%
! TCTAAAGTTCTCAGCTTTAC+CGG + chr3.2:87236300-87236319 MS.gene072892:CDS 35.0%
! TCTGAAGTCTTTCACTCTTT+GGG + chr3.2:87237472-87237491 MS.gene072892:CDS 35.0%
! TTGTGTGTGTTTGATTTCTC+AGG + chr3.2:87236912-87236931 MS.gene072892:intron 35.0%
! TTTTCTCCACTGAAGTCAAA+TGG - chr3.2:87237062-87237081 None:intergenic 35.0%
!! ACTCATTCATGTGGTTTTAC+TGG + chr3.2:87236847-87236866 MS.gene072892:intron 35.0%
!! TTACCGGTAAGCTTTTGATT+TGG + chr3.2:87236316-87236335 MS.gene072892:intron 35.0%
AAACCGTGGTGCAAAATTGA+AGG + chr3.2:87238168-87238187 MS.gene072892:CDS 40.0%
AACTAACGTCGCTCACAATT+GGG + chr3.2:87237945-87237964 MS.gene072892:CDS 40.0%
AAGTTGCATTGTTCGACTCT+TGG + chr3.2:87238487-87238506 MS.gene072892:CDS 40.0%
AATCCTTTCTCGGTGACATT+TGG - chr3.2:87237893-87237912 None:intergenic 40.0%
AGAGTGAAAGACTTCAGAGA+AGG - chr3.2:87237470-87237489 None:intergenic 40.0%
ATAGAGTCATGTCCTAGCAT+CGG + chr3.2:87237644-87237663 MS.gene072892:CDS 40.0%
ATTGTCTGCAATTGCTGTCA+TGG - chr3.2:87238554-87238573 None:intergenic 40.0%
CCATAGGATTACCCAATTTG+GGG + chr3.2:87238129-87238148 MS.gene072892:CDS 40.0%
GAAGCAGTGAAATAAACCCT+GGG - chr3.2:87238387-87238406 None:intergenic 40.0%
GACGGTGACAATCAAGAATT+TGG + chr3.2:87237269-87237288 MS.gene072892:CDS 40.0%
GAGTGAAAGACTTCAGAGAA+GGG - chr3.2:87237469-87237488 None:intergenic 40.0%
GATCAAGCCTTTGTCACTAA+TGG - chr3.2:87237507-87237526 None:intergenic 40.0%
GCCATAGGATTACCCAATTT+GGG + chr3.2:87238128-87238147 MS.gene072892:CDS 40.0%
GGTTTATTTCACTGCTTCAG+AGG + chr3.2:87238389-87238408 MS.gene072892:CDS 40.0%
GTGCATTTCTGTCAGACAAT+GGG + chr3.2:87238050-87238069 MS.gene072892:CDS 40.0%
GTTGCCAACAATTTCTGACA+AGG + chr3.2:87237574-87237593 MS.gene072892:CDS 40.0%
GTTGCTACCATTAGTGACAA+AGG + chr3.2:87237497-87237516 MS.gene072892:CDS 40.0%
GTTGCTGCAGATTTCATTCT+TGG - chr3.2:87237231-87237250 None:intergenic 40.0%
TATCTTTCTCGAAGCTTGGA+GGG + chr3.2:87237302-87237321 MS.gene072892:CDS 40.0%
TATGGCACTCTTCCAATTGT+AGG - chr3.2:87238114-87238133 None:intergenic 40.0%
TGAAGCAGTGAAATAAACCC+TGG - chr3.2:87238388-87238407 None:intergenic 40.0%
TGCATCAATCTGACAGATGT+AGG + chr3.2:87238448-87238467 MS.gene072892:CDS 40.0%
TGCCATAGGATTACCCAATT+TGG + chr3.2:87238127-87238146 MS.gene072892:CDS 40.0%
TGTGCATTTCTGTCAGACAA+TGG + chr3.2:87238049-87238068 MS.gene072892:CDS 40.0%
TTTCTCGGTGACATTTGGAA+GGG - chr3.2:87237888-87237907 None:intergenic 40.0%
! AATGTCCCATTTGACTTCAG+TGG + chr3.2:87237053-87237072 MS.gene072892:CDS 40.0%
! ACCACGGTTTAAAATGACAC+CGG - chr3.2:87238158-87238177 None:intergenic 40.0%
! ACCTTCTAAGGATCTCAAAG+AGG - chr3.2:87237136-87237155 None:intergenic 40.0%
! CTTGGAGTGCTAAACCTTAA+TGG + chr3.2:87238505-87238524 MS.gene072892:CDS 40.0%
! GGAGGTGATGATTTTTGTAC+TGG + chr3.2:87236933-87236952 MS.gene072892:intron 40.0%
! TGTGTGTTTGATTTCTCAGG+AGG + chr3.2:87236915-87236934 MS.gene072892:intron 40.0%
!! AAGCGAGATCTCTTTTGAAG+AGG - chr3.2:87237032-87237051 None:intergenic 40.0%
!! AGATGTAGGAGTTTTGTCCA+TGG + chr3.2:87238462-87238481 MS.gene072892:CDS 40.0%
!! ATCTCAAAGAGGCATTCATC+AGG - chr3.2:87237125-87237144 None:intergenic 40.0%
!! CTCTGAAGTCTTTCACTCTT+TGG + chr3.2:87237471-87237490 MS.gene072892:CDS 40.0%
!! TACAATTGGAAGAGTGCCAT+AGG + chr3.2:87238113-87238132 MS.gene072892:CDS 40.0%
AAAATTGGGTGATTCCCTCG+AGG + chr3.2:87238723-87238742 MS.gene072892:CDS 45.0%
AAATTGGGTGATTCCCTCGA+GGG + chr3.2:87238724-87238743 MS.gene072892:CDS 45.0%
AAGCTCCTATCTTGTCCTTC+AGG - chr3.2:87237161-87237180 None:intergenic 45.0%
ACAAGCTTGTGGAACATCTC+TGG + chr3.2:87238791-87238810 MS.gene072892:CDS 45.0%
ACACAATCTCGAGGAGGATT+AGG + chr3.2:87237368-87237387 MS.gene072892:CDS 45.0%
AGACCTTCATTACCGATGCT+AGG - chr3.2:87237659-87237678 None:intergenic 45.0%
AGATTGTGTGCCAACAGCAA+TGG - chr3.2:87237357-87237376 None:intergenic 45.0%
AGCCCAATATCTGTTACTCC+AGG - chr3.2:87237977-87237996 None:intergenic 45.0%
AGGCTATCTTTCTCGAAGCT+TGG + chr3.2:87237298-87237317 MS.gene072892:CDS 45.0%
ATCCTTAGAAGGTTGCCTGA+AGG + chr3.2:87237143-87237162 MS.gene072892:CDS 45.0%
ATCTTTCTCGAAGCTTGGAG+GGG + chr3.2:87237303-87237322 MS.gene072892:CDS 45.0%
ATGTCACCGAGAAAGGATTC+TGG + chr3.2:87237894-87237913 MS.gene072892:CDS 45.0%
ATTTCTGTCAGACAATGGGC+TGG + chr3.2:87238054-87238073 MS.gene072892:CDS 45.0%
CAACTAACGTCGCTCACAAT+TGG + chr3.2:87237944-87237963 MS.gene072892:CDS 45.0%
CACAATCTCGAGGAGGATTA+GGG + chr3.2:87237369-87237388 MS.gene072892:CDS 45.0%
CATCACCCAGAATCCTTTCT+CGG - chr3.2:87237903-87237922 None:intergenic 45.0%
CCCCAAATTGGGTAATCCTA+TGG - chr3.2:87238132-87238151 None:intergenic 45.0%
CGAACAATGCAACTTGACCA+TGG - chr3.2:87238482-87238501 None:intergenic 45.0%
CTATCTTTCTCGAAGCTTGG+AGG + chr3.2:87237301-87237320 MS.gene072892:CDS 45.0%
CTGGATGTACTTTCTTTGGC+AGG + chr3.2:87238661-87238680 MS.gene072892:CDS 45.0%
CTTACTCTGGTAAGCTGCTA+CGG + chr3.2:87238193-87238212 MS.gene072892:CDS 45.0%
CTTCCAAATGTCACCGAGAA+AGG + chr3.2:87237887-87237906 MS.gene072892:CDS 45.0%
CTTGACTGATGTAGGTCTCA+AGG + chr3.2:87237427-87237446 MS.gene072892:CDS 45.0%
CTTGAGACCTACATCAGTCA+AGG - chr3.2:87237429-87237448 None:intergenic 45.0%
CTTTCTCGGTGACATTTGGA+AGG - chr3.2:87237889-87237908 None:intergenic 45.0%
GAGAAAGGATTCTGGGTGAT+GGG + chr3.2:87237902-87237921 MS.gene072892:CDS 45.0%
GATATTGGGCTTGAAGCTGT+AGG + chr3.2:87237986-87238005 MS.gene072892:CDS 45.0%
GCCCAATATCTGTTACTCCA+GGG - chr3.2:87237976-87237995 None:intergenic 45.0%
GCCCTGGAGTAACAGATATT+GGG + chr3.2:87237972-87237991 MS.gene072892:CDS 45.0%
GGCTTGATCGAGATTGCTAA+TGG + chr3.2:87237518-87237537 MS.gene072892:CDS 45.0%
TGCCCTGGAGTAACAGATAT+TGG + chr3.2:87237971-87237990 MS.gene072892:CDS 45.0%
TGTCACCGAGAAAGGATTCT+GGG + chr3.2:87237895-87237914 MS.gene072892:CDS 45.0%
TTACTCTGGTAAGCTGCTAC+GGG + chr3.2:87238194-87238213 MS.gene072892:CDS 45.0%
TTATCAATCCGTAACTGCCC+TGG + chr3.2:87238274-87238293 MS.gene072892:CDS 45.0%
TTCACTGCTTCAGAGGTCTA+AGG + chr3.2:87238396-87238415 MS.gene072892:CDS 45.0%
TTCTTTGGCAGGTTGCTCAT+TGG + chr3.2:87238672-87238691 MS.gene072892:CDS 45.0%
TTGAGGGAATAACAGACCCA+GGG + chr3.2:87238368-87238387 MS.gene072892:CDS 45.0%
! ATTACCCAATTTGGGGTTGC+CGG + chr3.2:87238136-87238155 MS.gene072892:CDS 45.0%
! GAGCCTTCAATTTTGCACCA+CGG - chr3.2:87238174-87238193 None:intergenic 45.0%
!! CAACGCAAGTTCTGGAAACA+AGG + chr3.2:87237247-87237266 MS.gene072892:CDS 45.0%
!! CCACAAGCTTGTTAACTGTG+CGG - chr3.2:87238783-87238802 None:intergenic 45.0%
!! GCAAGTTCTGGAAACAAGGA+CGG + chr3.2:87237251-87237270 MS.gene072892:CDS 45.0%
!! GCCTCTTTGAGATCCTTAGA+AGG + chr3.2:87237132-87237151 MS.gene072892:CDS 45.0%
!! TGTCCTAGCATCGGTAATGA+AGG + chr3.2:87237653-87237672 MS.gene072892:CDS 45.0%
AAGAAGAGACCCACCTCCTT+CGG - chr3.2:87236978-87236997 None:intergenic 50.0%
AAGGGCAGAAATCCCTGCAT+CGG - chr3.2:87238620-87238639 None:intergenic 50.0%
ACATCAGTCAAGGCACGATC+TGG - chr3.2:87237419-87237438 None:intergenic 50.0%
ACGTTAGTTGCTGCAGTGCA+TGG - chr3.2:87237934-87237953 None:intergenic 50.0%
AGTGTGCAATCACCGATGCA+GGG + chr3.2:87238605-87238624 MS.gene072892:CDS 50.0%
ATCTGCAGCAACGCAAGTTC+TGG + chr3.2:87237239-87237258 MS.gene072892:CDS 50.0%
ATTCCCTGATCACGAACTCC+AGG - chr3.2:87237737-87237756 None:intergenic 50.0%
CACAATTGATGGAGCAGCCT+TGG - chr3.2:87238089-87238108 None:intergenic 50.0%
CCGCACAGTTAACAAGCTTG+TGG + chr3.2:87238780-87238799 MS.gene072892:CDS 50.0%
CGAGAAAGGATTCTGGGTGA+TGG + chr3.2:87237901-87237920 MS.gene072892:CDS 50.0%
CTTGAGGGAATAACAGACCC+AGG + chr3.2:87238367-87238386 MS.gene072892:CDS 50.0%
GAACAGGACTCCACGAGTAA+GGG - chr3.2:87238638-87238657 None:intergenic 50.0%
GATCGTGCCTTGACTGATGT+AGG + chr3.2:87237419-87237438 MS.gene072892:CDS 50.0%
GATGTACCTTAACCCGAAGG+AGG + chr3.2:87236962-87236981 MS.gene072892:CDS 50.0%
GGGCTTGAAGCTGTAGGAAA+GGG + chr3.2:87237992-87238011 MS.gene072892:CDS 50.0%
GGTTGCCTGAAGGACAAGAT+AGG + chr3.2:87237153-87237172 MS.gene072892:CDS 50.0%
GTCCTTCAGGCAACCTTCTA+AGG - chr3.2:87237148-87237167 None:intergenic 50.0%
GTCGATGTACCTTAACCCGA+AGG + chr3.2:87236959-87236978 MS.gene072892:CDS 50.0%
GTCTGACATGGAGATACTGC+TGG - chr3.2:87238244-87238263 None:intergenic 50.0%
GTGGGTCTCTTCTTGTCTCT+TGG + chr3.2:87236984-87237003 MS.gene072892:CDS 50.0%
GTTCGTGATCAGGGAATTGC+TGG + chr3.2:87237740-87237759 MS.gene072892:CDS 50.0%
TACCAACTCCAGGGCAGTTA+CGG - chr3.2:87238285-87238304 None:intergenic 50.0%
TACCTTAACCCGAAGGAGGT+GGG + chr3.2:87236966-87236985 MS.gene072892:CDS 50.0%
TCGAAGCTTGGAGGGGAAAA+AGG + chr3.2:87237310-87237329 MS.gene072892:CDS 50.0%
TCGTGGAGTCCTGTTCAATC+TGG + chr3.2:87238642-87238661 MS.gene072892:CDS 50.0%
TGAACAGGACTCCACGAGTA+AGG - chr3.2:87238639-87238658 None:intergenic 50.0%
TGGGCTTGAAGCTGTAGGAA+AGG + chr3.2:87237991-87238010 MS.gene072892:CDS 50.0%
TGTCCTGGAGTTCGTGATCA+GGG + chr3.2:87237731-87237750 MS.gene072892:CDS 50.0%
! AGACTAGCTGCCATTGCTGT+TGG + chr3.2:87237344-87237363 MS.gene072892:CDS 50.0%
! CAGAGGTCTAAGGCCAGTTT+GGG + chr3.2:87238406-87238425 MS.gene072892:CDS 50.0%
! TCAGAGGTCTAAGGCCAGTT+TGG + chr3.2:87238405-87238424 MS.gene072892:CDS 50.0%
! TGCATCGGTGATTGCACACT+CGG - chr3.2:87238605-87238624 None:intergenic 50.0%
!! GGATTCTGGGTGATGGGTAA+TGG + chr3.2:87237908-87237927 MS.gene072892:CDS 50.0%
!!! GCCGGTGTCATTTTAAACCG+TGG + chr3.2:87238154-87238173 MS.gene072892:CDS 50.0%
AGAAGAGACCCACCTCCTTC+GGG - chr3.2:87236977-87236996 None:intergenic 55.0%
ATCCGTAACTGCCCTGGAGT+TGG + chr3.2:87238280-87238299 MS.gene072892:CDS 55.0%
CTGTCCTGGAGTTCGTGATC+AGG + chr3.2:87237730-87237749 MS.gene072892:CDS 55.0%
GACACCGGCAACCCCAAATT+GGG - chr3.2:87238143-87238162 None:intergenic 55.0%
GAGTGTGCAATCACCGATGC+AGG + chr3.2:87238604-87238623 MS.gene072892:CDS 55.0%
GCATAGGACAGAGCTTCCCA+AGG - chr3.2:87238324-87238343 None:intergenic 55.0%
GCTGTTGGCACACAATCTCG+AGG + chr3.2:87237359-87237378 MS.gene072892:CDS 55.0%
GGGATTTCTGCCCTTACTCG+TGG + chr3.2:87238625-87238644 MS.gene072892:CDS 55.0%
GGTCTCAAGGCAGTTGCTCA+TGG + chr3.2:87237440-87237459 MS.gene072892:CDS 55.0%
GTACCTTAACCCGAAGGAGG+TGG + chr3.2:87236965-87236984 MS.gene072892:CDS 55.0%
GTGCTTCTGTATCCAAGCGC+TGG + chr3.2:87237183-87237202 MS.gene072892:CDS 55.0%
GTTGGCACACAATCTCGAGG+AGG + chr3.2:87237362-87237381 MS.gene072892:CDS 55.0%
TGACACCGGCAACCCCAAAT+TGG - chr3.2:87238144-87238163 None:intergenic 55.0%
!! TGGGCTGGTATCGTTCACCA+AGG + chr3.2:87238069-87238088 MS.gene072892:CDS 55.0%
CTCACAATTGGGCTGTGCCC+TGG + chr3.2:87237956-87237975 MS.gene072892:CDS 60.0%
! GACCCACCTCCTTCGGGTTA+AGG - chr3.2:87236971-87236990 None:intergenic 60.0%
! TAGAAGCGTGAGCCAGCGCT+TGG - chr3.2:87237198-87237217 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 87236297 87238834 87236297 ID=MS.gene072892
chr3.2 mRNA 87236297 87238834 87236297 ID=MS.gene072892.t1;Parent=MS.gene072892
chr3.2 exon 87236297 87236321 87236297 ID=MS.gene072892.t1.exon1;Parent=MS.gene072892.t1
chr3.2 CDS 87236297 87236321 87236297 ID=cds.MS.gene072892.t1;Parent=MS.gene072892.t1
chr3.2 exon 87236934 87238834 87236934 ID=MS.gene072892.t1.exon2;Parent=MS.gene072892.t1
chr3.2 CDS 87236934 87238834 87236934 ID=cds.MS.gene072892.t1;Parent=MS.gene072892.t1
Gene Sequence

>MS.gene072892

ATGTCTAAAGTTCTCAGCTTTACCGGTAAGCTTTTGATTTGGTTCATGTTTCATCTGATTATTGGTTTTAGCTGTCGAGTTTTGATTCTGTTATTTTATAATGTTTGTTATCATAGATATGAATTTGATGTTTTGATTTTAGTTTTCTGTGTTCTATATTGATTTGTTATGATTTCTATTTTAGTTTTGGTAATTAAATCTACTTTTTTGGTGGATCTGATTAGTGATATAGACAATTTAATTTTATTTATTTTGAGATAGTATATAATTTGGCATGAAATTGTTTTAATAATTTGCTTTTAGTGACGATAAAAGATAATTTTGTTGGTAGTTGTTATATGTATTTTGTGGGAAATGAATCATGTTCACATATATGATAGATAGTTTTGTATGCATATGAGATCAATAATTTTGCTCAAAATTGATTTGATCAGTAATTTTGCTCAAAATTCATTTGTGTTGGATTTCTTTAATATGTCTAGTTATGTGTTTTGGTCAATTTAATTTTTTTGTTTGGTTGTGTTCAAATCTTTTACTCAGATTATATAATACTCATTCATGTGGTTTTACTGGTAGAGTTTTTATGTTTCTCTAATTTTATTTTTTTTATTTACCTTGTGTGTGTTTGATTTCTCAGGAGGTGATGATTTTTGTACTGGAAGGTCGATGTACCTTAACCCGAAGGAGGTGGGTCTCTTCTTGTCTCTTGGCCGTCAAGAATATGCTTACAGACCTCTTCAAAAGAGATCTCGCTTCAATGTCCCATTTGACTTCAGTGGAGAAAAATGGTTTGAGCAGAAGCTAGAGACATCTATTGAAACATTGCCTGATGAATGCCTCTTTGAGATCCTTAGAAGGTTGCCTGAAGGACAAGATAGGAGCTTATGTGCTTCTGTATCCAAGCGCTGGCTCACGCTTCTAAGCAGTATTTCCAAGAATGAAATCTGCAGCAACGCAAGTTCTGGAAACAAGGACGGTGACAATCAAGAATTTGGTGATGAAGGCTATCTTTCTCGAAGCTTGGAGGGGAAAAAGGCAACAGATGTCAGACTAGCTGCCATTGCTGTTGGCACACAATCTCGAGGAGGATTAGGGAAGCTTTCAATTCATGGAAGCAATCCAGATCGTGCCTTGACTGATGTAGGTCTCAAGGCAGTTGCTCATGGCTGCCCTTCTCTGAAGTCTTTCACTCTTTGGGATGTTGCTACCATTAGTGACAAAGGCTTGATCGAGATTGCTAATGGTTGTCATCAGATAGAGGAGCTTGACCTATGCAAGTTGCCAACAATTTCTGACAAGGCTTTGATTGCAGTTGCAAAGCACTGTCCGAATCTGACTGAGTTATCGATAGAGTCATGTCCTAGCATCGGTAATGAAGGTCTACATGCTATTGGAAAGTTGTGTCCAAATCTAAGGTCCGTATCAATTAAAAACTGTCCTGGAGTTCGTGATCAGGGAATTGCTGGCCTATTATGTTCAGCATCCATTATTCTAAAAAAGCTGACACTTGAATCGCTAGCTGTTTCTGATTACTCACTAGCAGTTATTGGACAATATGGCTTTGTGGTTACTGATCTTGTCTTAAATTCCCTTCCAAATGTCACCGAGAAAGGATTCTGGGTGATGGGTAATGGCCATGCACTGCAGCAACTAACGTCGCTCACAATTGGGCTGTGCCCTGGAGTAACAGATATTGGGCTTGAAGCTGTAGGAAAGGGTTGTCCAAATGTGAAAAACTTTCAGCTTCGTAGGTGTGCATTTCTGTCAGACAATGGGCTGGTATCGTTCACCAAGGCTGCTCCATCAATTGTGAGCCTACAATTGGAAGAGTGCCATAGGATTACCCAATTTGGGGTTGCCGGTGTCATTTTAAACCGTGGTGCAAAATTGAAGGCTCTTACTCTGGTAAGCTGCTACGGGATCAAAGATCTGAATCTCAATTTGCCAGCAGTATCTCCATGTCAGACAATTTCGTCATTATCAATCCGTAACTGCCCTGGAGTTGGTAATTTTACTCTCAACGTCCTTGGGAAGCTCTGTCCTATGCTTCAGTGTCTTGAATTGATTGGACTTGAGGGAATAACAGACCCAGGGTTTATTTCACTGCTTCAGAGGTCTAAGGCCAGTTTGGGTAATGTTAATCTAAGTGGTTGCATCAATCTGACAGATGTAGGAGTTTTGTCCATGGTCAAGTTGCATTGTTCGACTCTTGGAGTGCTAAACCTTAATGGTTGTAAAAAGGTCGGGGATGCTTCCATGACAGCAATTGCAGACAATTGCATTGTCTTGAGTGATCTTGATGTTTCCGAGTGTGCAATCACCGATGCAGGGATTTCTGCCCTTACTCGTGGAGTCCTGTTCAATCTGGATGTACTTTCTTTGGCAGGTTGCTCATTGGTTTCAAACAAGAGCTTGTCTGCTTTGAAAAAATTGGGTGATTCCCTCGAGGGATTAAATATAAAAAATTGCAATTCGATCAGCAGCCGCACAGTTAACAAGCTTGTGGAACATCTCTGGATGTGTGACATCCTCTTCTGA
Protein sequence

>MS.gene072892.t1

MSKVLSFTGGDDFCTGRSMYLNPKEVGLFLSLGRQEYAYRPLQKRSRFNVPFDFSGEKWFEQKLETSIETLPDECLFEILRRLPEGQDRSLCASVSKRWLTLLSSISKNEICSNASSGNKDGDNQEFGDEGYLSRSLEGKKATDVRLAAIAVGTQSRGGLGKLSIHGSNPDRALTDVGLKAVAHGCPSLKSFTLWDVATISDKGLIEIANGCHQIEELDLCKLPTISDKALIAVAKHCPNLTELSIESCPSIGNEGLHAIGKLCPNLRSVSIKNCPGVRDQGIAGLLCSASIILKKLTLESLAVSDYSLAVIGQYGFVVTDLVLNSLPNVTEKGFWVMGNGHALQQLTSLTIGLCPGVTDIGLEAVGKGCPNVKNFQLRRCAFLSDNGLVSFTKAAPSIVSLQLEECHRITQFGVAGVILNRGAKLKALTLVSCYGIKDLNLNLPAVSPCQTISSLSIRNCPGVGNFTLNVLGKLCPMLQCLELIGLEGITDPGFISLLQRSKASLGNVNLSGCINLTDVGVLSMVKLHCSTLGVLNLNGCKKVGDASMTAIADNCIVLSDLDVSECAITDAGISALTRGVLFNLDVLSLAGCSLVSNKSLSALKKLGDSLEGLNIKNCNSISSRTVNKLVEHLWMCDILF