AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene31040

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene31040.t1 MTR_3g094850 96.927 358 7 2 1 356 1 356 0.0 705
MS.gene31040.t1 MTR_8g030940 30.712 267 155 8 4 250 20 276 1.52e-28 114
MS.gene31040.t1 MTR_4g114110 30.225 311 193 12 2 294 74 378 2.40e-25 106
MS.gene31040.t1 MTR_2g019230 29.592 294 178 11 9 280 52 338 9.76e-25 104
MS.gene31040.t1 MTR_8g085600 28.618 304 193 11 9 294 77 374 1.81e-24 103
MS.gene31040.t1 MTR_3g073640 24.348 345 182 8 4 270 38 381 1.89e-21 95.5
MS.gene31040.t1 MTR_7g066320 93.478 46 1 1 1 46 32 75 1.70e-19 82.0
MS.gene31040.t1 MTR_2g008440 24.058 345 182 7 6 270 40 384 2.98e-18 86.3
MS.gene31040.t1 MTR_8g080370 27.426 237 152 7 4 224 46 278 5.73e-18 84.7
MS.gene31040.t1 MTR_3g085570 29.954 217 137 7 5 212 31 241 7.61e-17 81.3
MS.gene31040.t1 MTR_2g094093 25.723 311 195 11 6 290 17 317 8.21e-16 78.2
MS.gene31040.t1 MTR_7g095220 30.102 196 116 5 7 186 2 192 6.37e-15 75.5
MS.gene31040.t1 MTR_3g108860 24.221 289 181 11 6 277 14 281 1.74e-13 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene31040.t1 AT2G21950 55.899 356 140 7 7 351 18 367 8.19e-139 399
MS.gene31040.t1 AT4G39550 38.421 380 194 12 5 353 19 389 4.24e-72 229
MS.gene31040.t1 AT4G39580 35.925 373 203 13 2 350 9 369 4.03e-64 208
MS.gene31040.t1 AT4G39240 34.358 358 202 10 13 356 37 375 2.71e-61 201
MS.gene31040.t1 AT5G49000 35.813 363 203 14 11 356 23 372 4.78e-57 190
MS.gene31040.t1 AT4G23580 36.413 368 193 14 1 340 9 363 3.73e-56 188
MS.gene31040.t1 AT4G33900 36.415 357 185 14 13 340 15 358 1.64e-55 186
MS.gene31040.t1 AT4G39590 36.605 377 193 17 10 355 38 399 2.23e-55 186
MS.gene31040.t1 AT5G48990 34.204 383 205 14 2 356 9 372 1.18e-53 181
MS.gene31040.t1 AT4G11770 32.593 405 195 15 10 356 12 396 1.97e-51 176
MS.gene31040.t1 AT4G29370 31.351 370 222 12 6 356 22 378 2.95e-51 175
MS.gene31040.t1 AT1G60570 34.301 379 220 14 1 356 9 381 2.12e-50 173
MS.gene31040.t1 AT4G19330 32.320 362 205 11 13 351 34 378 7.62e-49 169
MS.gene31040.t1 AT3G43710 34.006 347 206 11 10 342 26 363 1.06e-48 168
MS.gene31040.t1 AT4G39600 33.791 364 200 14 11 350 26 372 4.67e-48 166
MS.gene31040.t1 AT4G39600 33.791 364 200 14 11 350 15 361 5.19e-48 166
MS.gene31040.t1 AT4G19870 32.011 378 209 10 15 356 35 400 1.04e-47 166
MS.gene31040.t1 AT4G19870 32.011 378 209 10 15 356 35 400 1.04e-47 166
MS.gene31040.t1 AT4G14905 31.287 342 202 10 15 342 36 358 1.52e-47 165
MS.gene31040.t1 AT4G14905 31.287 342 202 10 15 342 36 358 1.52e-47 165
MS.gene31040.t1 AT2G29600 32.787 366 217 13 11 356 59 415 4.67e-47 165
MS.gene31040.t1 AT4G39290 31.551 374 212 13 2 350 5 359 5.96e-47 163
MS.gene31040.t1 AT2G29810 33.875 369 224 12 1 356 22 383 1.15e-46 163
MS.gene31040.t1 AT1G19930 34.722 360 181 11 1 340 1 326 9.37e-46 159
MS.gene31040.t1 AT4G39570 33.511 376 209 14 10 356 32 395 5.02e-45 159
MS.gene31040.t1 AT4G34170 34.899 298 167 10 13 305 15 290 8.15e-45 155
MS.gene31040.t1 AT2G29830 31.492 362 203 14 2 333 13 359 9.87e-45 158
MS.gene31040.t1 AT5G49000 32.857 350 187 14 11 356 23 328 2.85e-44 155
MS.gene31040.t1 AT4G35120 33.243 367 221 11 10 356 27 389 3.23e-44 157
MS.gene31040.t1 AT2G29770 32.432 370 215 15 2 348 22 379 5.12e-44 156
MS.gene31040.t1 AT4G38940 32.520 369 210 13 9 356 20 370 8.03e-44 155
MS.gene31040.t1 AT1G61540 33.592 387 204 18 10 356 27 400 6.37e-43 154
MS.gene31040.t1 AT5G51250 33.422 374 216 13 10 356 1 368 1.25e-42 152
MS.gene31040.t1 AT4G39756 30.495 364 213 13 12 351 22 369 5.74e-42 150
MS.gene31040.t1 AT4G11750 31.443 388 216 12 10 356 8 386 5.86e-42 150
MS.gene31040.t1 AT2G21680 32.338 402 200 18 13 356 42 429 3.41e-41 149
MS.gene31040.t1 AT5G38680 31.868 364 193 12 6 344 12 345 8.01e-41 147
MS.gene31040.t1 AT3G27910 35.000 260 149 9 105 356 47 294 6.61e-40 143
MS.gene31040.t1 AT3G06570 31.593 364 213 13 13 349 29 383 7.74e-40 145
MS.gene31040.t1 AT1G19470 32.231 363 219 15 13 356 58 412 1.98e-39 144
MS.gene31040.t1 AT2G22030 32.361 377 216 14 4 355 20 382 1.48e-38 141
MS.gene31040.t1 AT4G19865 29.947 374 215 12 15 356 35 393 1.74e-38 141
MS.gene31040.t1 AT3G46050 34.060 367 189 15 2 341 5 345 2.50e-38 140
MS.gene31040.t1 AT4G39760 29.973 367 219 14 12 356 19 369 5.33e-38 140
MS.gene31040.t1 AT1G19460 30.874 366 224 13 13 356 58 416 6.85e-38 140
MS.gene31040.t1 AT5G48980 32.021 381 207 18 11 355 33 397 2.64e-37 139
MS.gene31040.t1 AT2G29780 31.135 379 215 13 5 356 39 398 3.53e-37 138
MS.gene31040.t1 AT5G39560 32.533 375 196 16 12 344 31 390 4.68e-37 138
MS.gene31040.t1 AT4G39560 39.024 246 136 7 1 235 18 260 7.73e-37 134
MS.gene31040.t1 AT4G39560 39.024 246 136 7 1 235 18 260 7.73e-37 134
MS.gene31040.t1 AT2G44030 32.231 363 197 14 12 347 21 361 8.83e-37 137
MS.gene31040.t1 AT5G02980 34.294 347 175 12 7 341 11 316 2.19e-36 134
MS.gene31040.t1 AT5G03000 33.333 345 172 13 8 341 38 335 2.32e-36 135
MS.gene31040.t1 AT2G44630 31.832 333 190 10 12 323 26 342 4.45e-35 132
MS.gene31040.t1 AT4G11745 34.483 261 146 12 107 356 36 282 4.72e-35 130
MS.gene31040.t1 AT4G19250 34.454 238 137 8 117 351 2 223 1.53e-34 127
MS.gene31040.t1 AT2G29800 31.054 351 210 11 13 343 63 401 2.80e-34 130
MS.gene31040.t1 AT4G25710 30.239 377 228 10 6 356 23 390 5.48e-34 129
MS.gene31040.t1 AT2G29820 31.098 328 194 13 22 333 53 364 4.00e-33 127
MS.gene31040.t1 AT2G29780 33.955 268 150 8 2 250 36 295 7.63e-33 125
MS.gene31040.t1 AT5G28160 27.424 361 186 11 12 350 12 318 6.21e-30 117
MS.gene31040.t1 AT5G28180 27.049 366 182 14 12 350 39 346 2.68e-29 116
MS.gene31040.t1 AT3G24610 28.346 381 182 12 4 342 22 353 9.74e-29 115
MS.gene31040.t1 AT2G22050 36.170 235 115 12 12 223 33 255 1.04e-28 112
MS.gene31040.t1 AT2G03460 31.624 234 149 6 124 350 21 250 2.92e-28 111
MS.gene31040.t1 AT2G22050 36.364 231 112 12 12 219 33 251 4.94e-28 110
MS.gene31040.t1 AT2G44700 28.771 358 227 12 9 355 27 367 5.58e-28 112
MS.gene31040.t1 AT4G02310 29.248 359 221 14 3 350 6 342 4.77e-27 110
MS.gene31040.t1 AT2G29860 35.407 209 122 7 6 206 15 218 5.53e-27 107
MS.gene31040.t1 AT1G55270 27.763 371 223 13 9 352 78 430 7.58e-27 110
MS.gene31040.t1 AT3G10510 27.945 365 209 14 2 333 7 350 1.10e-26 109
MS.gene31040.t1 AT3G08810 27.957 372 194 11 2 349 15 336 1.45e-26 108
MS.gene31040.t1 AT4G39753 27.901 362 226 14 15 354 40 388 1.61e-26 109
MS.gene31040.t1 AT2G20380 26.684 386 209 16 2 356 6 348 6.90e-26 106
MS.gene31040.t1 AT2G41360 27.937 383 229 19 1 351 1 368 1.01e-25 106
MS.gene31040.t1 AT5G03020 30.058 346 198 11 15 348 22 335 1.16e-25 106
MS.gene31040.t1 AT4G25710 32.083 240 141 5 11 228 28 267 5.18e-23 97.4
MS.gene31040.t1 AT5G38670 27.424 361 187 17 1 356 1 291 2.25e-22 95.9
MS.gene31040.t1 AT3G61350 27.509 269 172 10 9 265 21 278 1.83e-21 94.4
MS.gene31040.t1 AT3G61350 27.509 269 172 10 9 265 21 278 1.83e-21 94.4
MS.gene31040.t1 AT4G36840 31.111 225 129 8 138 342 1 219 2.19e-21 92.0
MS.gene31040.t1 AT1G67480 29.710 276 170 10 9 266 39 308 9.45e-21 92.8
MS.gene31040.t1 AT1G67480 29.710 276 170 10 9 266 39 308 9.45e-21 92.8
MS.gene31040.t1 AT1G67480 29.710 276 170 10 9 266 39 308 9.45e-21 92.8
MS.gene31040.t1 AT1G30090 28.438 320 190 12 9 302 53 359 1.86e-20 92.0
MS.gene31040.t1 AT1G22040 25.843 356 181 8 9 281 43 398 1.88e-20 92.8
MS.gene31040.t1 AT5G02995 28.165 316 193 9 29 332 2 295 2.58e-20 90.5
MS.gene31040.t1 AT4G36840 30.583 206 119 7 138 323 1 202 2.56e-17 80.1
MS.gene31040.t1 AT1G27420 27.368 285 182 10 3 268 4 282 3.28e-17 82.0
MS.gene31040.t1 AT3G63220 25.806 310 200 11 2 294 4 300 1.36e-16 80.5
MS.gene31040.t1 AT3G63220 25.806 310 200 11 2 294 4 300 1.36e-16 80.5
MS.gene31040.t1 AT3G63220 26.230 305 195 11 7 294 2 293 3.17e-16 79.3
MS.gene31040.t1 AT2G24540 24.825 286 193 10 3 270 22 303 9.15e-16 78.2
MS.gene31040.t1 AT2G45406 42.683 82 46 1 109 190 2 82 2.82e-14 69.3
MS.gene31040.t1 AT5G02990 35.556 135 83 2 16 146 24 158 2.88e-13 67.4
MS.gene31040.t1 AT5G60570 24.883 213 148 6 1 210 41 244 7.28e-12 66.6
MS.gene31040.t1 AT5G60570 24.883 213 148 6 1 210 41 244 7.28e-12 66.6
MS.gene31040.t1 AT5G60570 24.883 213 148 6 1 210 41 244 7.28e-12 66.6
MS.gene31040.t1 AT1G16250 26.639 244 153 8 6 227 5 244 7.35e-12 66.6
MS.gene31040.t1 AT1G16250 26.639 244 153 8 6 227 5 244 7.35e-12 66.6
MS.gene31040.t1 AT1G31350 26.346 353 213 13 4 317 30 374 4.63e-11 63.9
MS.gene31040.t1 AT1G31350 26.346 353 213 13 4 317 66 410 6.50e-11 63.9

Find 148 sgRNAs with CRISPR-Local

Find 156 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTATTGCTATGATTATTT+AGG 0.101723 3.3:+78738198 MS.gene31040:CDS
TGGGAAATTGGTTGTGGTTT+GGG 0.195904 3.3:+78738326 MS.gene31040:CDS
ATCCATTTCTCACGAATTTC+TGG 0.252013 3.3:-78738027 None:intergenic
ATGGGATCAGGTTTGAGTTT+TGG 0.259611 3.3:-78737474 None:intergenic
GACCCGTGCAAGGCAGTTTA+TGG 0.265673 3.3:-78737515 None:intergenic
TGTATTGCTATGATTATTTA+GGG 0.266313 3.3:+78738199 MS.gene31040:CDS
TGATTATTTAGGGAAAATTA+AGG 0.267251 3.3:+78738209 MS.gene31040:CDS
GTGGGAAATTGGTTGTGGTT+TGG 0.275006 3.3:+78738325 MS.gene31040:CDS
CTCTCCCACGCTCCATTATA+AGG 0.279859 3.3:-78738117 None:intergenic
CAGTTTATGGCTACGTCGTC+TGG 0.300590 3.3:-78737502 None:intergenic
GGCTGATGTTGGTGGGAAAT+TGG 0.300862 3.3:+78738314 MS.gene31040:CDS
AAGGAAGAGGAGGGAGAGGG+AGG 0.303836 3.3:-78737717 None:intergenic
AATTGTGGGGTGAAGTTTGT+TGG 0.325029 3.3:+78738445 MS.gene31040:CDS
CTTTCCCAGCGGTTGGTAAC+AGG 0.327535 3.3:-78737991 None:intergenic
GTTGGGAGGGAGCTTGATTT+AGG 0.327637 3.3:+78738141 MS.gene31040:CDS
GGGGAAGGAAGAGGAGGGAG+AGG 0.332205 3.3:-78737721 None:intergenic
GTGGAGAAGAGAGGAGAGAA+TGG 0.338796 3.3:-78737582 None:intergenic
CTCCGACCAATTTGCTGATC+TGG 0.348732 3.3:-78737959 None:intergenic
GAGGAGAGAATGGATTGGTT+TGG 0.385212 3.3:-78737572 None:intergenic
CGCCACCCGCATGGAGGGAC+CGG 0.390576 3.3:-78737863 None:intergenic
CGGGGAGCCAGCGGTGGAAT+CGG 0.393995 3.3:-78737843 None:intergenic
GGAGGAGACGGTGGTTATTG+TGG 0.394778 3.3:-78737699 None:intergenic
GAGGAGGGAGAGGGAGGAGA+CGG 0.398264 3.3:-78737711 None:intergenic
CACCAGAAATTCGTGAGAAA+TGG 0.399575 3.3:+78738025 MS.gene31040:CDS
AGGGGAAAGAAATGGAGATT+TGG 0.400105 3.3:+78738379 MS.gene31040:CDS
GAGAGAGGTAGAGGATGTGT+TGG 0.414107 3.3:-78737639 None:intergenic
TTGATTGCCGATTCCACCGC+TGG 0.415692 3.3:+78737836 MS.gene31040:CDS
TATTGTGGAGGGTGAAGAAT+TGG 0.417411 3.3:-78737684 None:intergenic
GAATAAGGATGGGGAATTGT+GGG 0.418586 3.3:+78738431 MS.gene31040:CDS
TGAACAATGGAAGATCCTTT+AGG 0.424469 3.3:-78738489 None:intergenic
GTGGAAGGAGTTGAAAGGTT+TGG 0.425255 3.3:+78738254 MS.gene31040:CDS
CGTCTGGGAGGGATGGGATC+AGG 0.425632 3.3:-78737486 None:intergenic
AATGTTCTTTCTGTTCCTAA+AGG 0.426640 3.3:+78738474 MS.gene31040:CDS
GATTATTTAGGGAAAATTAA+GGG 0.427665 3.3:+78738210 MS.gene31040:CDS
TTGGTTTGGAAACGAGGGTG+AGG 0.443707 3.3:-78737558 None:intergenic
GCTACGTCGTCTGGGAGGGA+TGG 0.445851 3.3:-78737493 None:intergenic
ATGGAGCGTGGGAGAGCGTT+GGG 0.446205 3.3:+78738124 MS.gene31040:CDS
ATGTACCATCTCGTCATGTA+TGG 0.447118 3.3:+78737809 MS.gene31040:CDS
GCGCGTGAATTCGCAGCTGC+TGG 0.448675 3.3:+78737883 MS.gene31040:CDS
CGATTCCACCGCTGGCTCCC+CGG 0.454099 3.3:+78737844 MS.gene31040:CDS
TAGAGGATGTGTTGGGTGGA+AGG 0.455700 3.3:-78737631 None:intergenic
CTACGTCGTCTGGGAGGGAT+GGG 0.457938 3.3:-78737492 None:intergenic
GAGGGAGAGGGAGGAGACGG+TGG 0.459896 3.3:-78737708 None:intergenic
AAGAAGAAGAAGAATAAGGA+TGG 0.461286 3.3:+78738420 MS.gene31040:CDS
GGAGGGAGCTTGATTTAGGT+TGG 0.464558 3.3:+78738145 MS.gene31040:CDS
GGGAAGGAAGAGGAGGGAGA+GGG 0.467938 3.3:-78737720 None:intergenic
GCGTAAGCGGAGCCGATTGT+AGG 0.471244 3.3:-78737742 None:intergenic
CGTAAGCGGAGCCGATTGTA+GGG 0.471976 3.3:-78737741 None:intergenic
AGAATAAGGATGGGGAATTG+TGG 0.475295 3.3:+78738430 MS.gene31040:CDS
GTGTGCGGAGAGAGAGGTAG+AGG 0.475726 3.3:-78737648 None:intergenic
TGTTGGTGGGAAATTGGTTG+TGG 0.476458 3.3:+78738320 MS.gene31040:CDS
CCTCTTCCTTCCCCTACAAT+CGG 0.477902 3.3:+78737730 MS.gene31040:CDS
TCGATCCTGTTACCAACCGC+TGG 0.491929 3.3:+78737986 MS.gene31040:CDS
AGAGGATGTGTTGGGTGGAA+GGG 0.494197 3.3:-78737630 None:intergenic
AGCGGTGGAATCGGCAATCA+AGG 0.496819 3.3:-78737834 None:intergenic
AAATAAGAAGGGGAAAGAAA+TGG 0.497591 3.3:+78738371 MS.gene31040:CDS
GCTCCCCGGTCCCTCCATGC+GGG 0.498399 3.3:+78737858 MS.gene31040:CDS
TGGTTTGGAAACGAGGGTGA+GGG 0.501416 3.3:-78737557 None:intergenic
GCCACCCGCATGGAGGGACC+GGG 0.502655 3.3:-78737862 None:intergenic
AGGGTTGTGTGGTGAGAGCG+TGG 0.503990 3.3:-78737538 None:intergenic
TCACGAATTTCTGGTGGACT+AGG 0.504253 3.3:-78738018 None:intergenic
GAAGAGAGGAGAGAATGGAT+TGG 0.505986 3.3:-78737577 None:intergenic
GTTTACCAAGGTTTCTGTGT+GGG 0.506144 3.3:+78738283 MS.gene31040:CDS
AGGGACCGGGGAGCCAGCGG+TGG 0.509897 3.3:-78737849 None:intergenic
GGGAGAGCAACTGTTGTGGA+TGG 0.510495 3.3:+78738171 MS.gene31040:CDS
GCTACAATGGCTGATGTTGG+TGG 0.511043 3.3:+78738306 MS.gene31040:CDS
GAATTTGAATGCAAATAAGA+AGG 0.511518 3.3:+78738359 MS.gene31040:CDS
CACGCTAGCGCGGTCGTAGA+CGG 0.513221 3.3:+78738051 MS.gene31040:CDS
AGAGAGGTAGAGGATGTGTT+GGG 0.517370 3.3:-78737638 None:intergenic
AATTTGAATGCAAATAAGAA+GGG 0.517396 3.3:+78738360 MS.gene31040:CDS
TTGTGGTTTGGGAGTGTCAA+AGG 0.519615 3.3:+78738337 MS.gene31040:CDS
CATTTCTCACGAATTTCTGG+TGG 0.520076 3.3:-78738024 None:intergenic
GGTGAAGAATTGGAGAGAGG+TGG 0.521152 3.3:-78737674 None:intergenic
GTTTCTGTGTGGGGCTACAA+TGG 0.522064 3.3:+78738293 MS.gene31040:CDS
CCGATTGTAGGGGAAGGAAG+AGG 0.526253 3.3:-78737730 None:intergenic
AATGGATTGGTTTGGAAACG+AGG 0.527115 3.3:-78737564 None:intergenic
CGTCATCGGTGGTTGCGTGC+CGG 0.527892 3.3:+78737927 MS.gene31040:CDS
GAGGTAGAGGATGTGTTGGG+TGG 0.532415 3.3:-78737635 None:intergenic
TGAAGAAGAGTGGAGAAGAG+AGG 0.534364 3.3:-78737591 None:intergenic
GGGGCTACAATGGCTGATGT+TGG 0.535073 3.3:+78738303 MS.gene31040:CDS
AGAAGAAGAAGAATAAGGAT+GGG 0.535671 3.3:+78738421 MS.gene31040:CDS
TAGCCATAAACTGCCTTGCA+CGG 0.537984 3.3:+78737512 MS.gene31040:CDS
AATGGAGCGTGGGAGAGCGT+TGG 0.540307 3.3:+78738123 MS.gene31040:CDS
TGGAGCGTGTGCGGAGAGAG+AGG 0.541247 3.3:-78737654 None:intergenic
CAGCTGCTGGTGTTATCGAC+GGG 0.541290 3.3:+78737896 MS.gene31040:CDS
TTTACCAAGGTTTCTGTGTG+GGG 0.550464 3.3:+78738284 MS.gene31040:CDS
TCACGCGCCACCCGCATGGA+GGG 0.550890 3.3:-78737868 None:intergenic
AGCTTGATTTAGGTTGGCGC+GGG 0.552408 3.3:+78738151 MS.gene31040:CDS
AGGAACACTTTCCCAGCGGT+TGG 0.557279 3.3:-78737998 None:intergenic
GGAGACGGTGGTTATTGTGG+AGG 0.557706 3.3:-78737696 None:intergenic
CTACAATGGCTGATGTTGGT+GGG 0.559479 3.3:+78738307 MS.gene31040:CDS
TGGAGGGACCGGGGAGCCAG+CGG 0.559843 3.3:-78737852 None:intergenic
TATGGCTACGTCGTCTGGGA+GGG 0.561867 3.3:-78737497 None:intergenic
GAGCGAGCGGTGAAGAAGAG+TGG 0.563340 3.3:-78737601 None:intergenic
GAAGAAGAAGAATAAGGATG+GGG 0.563686 3.3:+78738422 MS.gene31040:CDS
CGATCCTGTTACCAACCGCT+GGG 0.564306 3.3:+78737987 MS.gene31040:CDS
GAGAGCGTGGGACCCGTGCA+AGG 0.565651 3.3:-78737525 None:intergenic
GGAGAGAGGTGGAGCGTGTG+CGG 0.565891 3.3:-78737663 None:intergenic
AGTTTATGGCTACGTCGTCT+GGG 0.567545 3.3:-78737501 None:intergenic
TTCCAGATCAGCAAATTGGT+CGG 0.568075 3.3:+78737957 MS.gene31040:CDS
ATTGTAGGGGAAGGAAGAGG+AGG 0.569549 3.3:-78737727 None:intergenic
AGCCATAAACTGCCTTGCAC+GGG 0.572097 3.3:+78737513 MS.gene31040:CDS
ATGGATTGGTTTGGAAACGA+GGG 0.575321 3.3:-78737563 None:intergenic
AGCGTGGGAGAGCGTTGGGA+GGG 0.581664 3.3:+78738128 MS.gene31040:CDS
GAATTCACGCGCCACCCGCA+TGG 0.582008 3.3:-78737872 None:intergenic
CCCCGGTCCCTCCATGCGGG+TGG 0.583728 3.3:+78737861 MS.gene31040:CDS
GGCTCCCCGGTCCCTCCATG+CGG 0.585977 3.3:+78737857 MS.gene31040:CDS
CAGATCAGCAAATTGGTCGG+AGG 0.586808 3.3:+78737960 MS.gene31040:CDS
GCAGCTGCTGGTGTTATCGA+CGG 0.586899 3.3:+78737895 MS.gene31040:CDS
GAGCGTGGGAGAGCGTTGGG+AGG 0.588514 3.3:+78738127 MS.gene31040:CDS
GAGGGTGAAGAATTGGAGAG+AGG 0.589538 3.3:-78737677 None:intergenic
GAGCTTGATTTAGGTTGGCG+CGG 0.591579 3.3:+78738150 MS.gene31040:CDS
GGAGAGCAACTGTTGTGGAT+GGG 0.594745 3.3:+78738172 MS.gene31040:CDS
CACCACAAAATCTACCTCAT+CGG 0.600911 3.3:+78737772 MS.gene31040:CDS
TTGTAGGGGAAGGAAGAGGA+GGG 0.601044 3.3:-78737726 None:intergenic
AATAAGGATGGGGAATTGTG+GGG 0.601563 3.3:+78738432 MS.gene31040:CDS
TTCACGCGCCACCCGCATGG+AGG 0.601818 3.3:-78737869 None:intergenic
TTATGGCTACGTCGTCTGGG+AGG 0.604755 3.3:-78737498 None:intergenic
AAACGAGGGTGAGGGTTGTG+TGG 0.611470 3.3:-78737549 None:intergenic
GTGGTGGATGACAGCGTAAG+CGG 0.611973 3.3:-78737755 None:intergenic
CCACCCGCATGGAGGGACCG+GGG 0.612009 3.3:-78737861 None:intergenic
GTAGCCCCACACAGAAACCT+TGG 0.612328 3.3:-78738288 None:intergenic
TTGATGTGAAGAAAGGGTTG+TGG 0.612357 3.3:+78738235 MS.gene31040:CDS
GACGGGAAAATCTACGTCAT+CGG 0.619777 3.3:+78737913 MS.gene31040:CDS
GCGGAGCCGATTGTAGGGGA+AGG 0.620894 3.3:-78737736 None:intergenic
GGGTTGTGGAAGGAGTTGAA+AGG 0.624861 3.3:+78738249 MS.gene31040:CDS
TGATCCTTATAATGGAGCGT+GGG 0.625550 3.3:+78738113 MS.gene31040:CDS
TTGATCCTTATAATGGAGCG+TGG 0.628287 3.3:+78738112 MS.gene31040:CDS
AGGATCCATACATGACGAGA+TGG 0.628694 3.3:-78737814 None:intergenic
ATTTGAATGCAAATAAGAAG+GGG 0.632620 3.3:+78738361 MS.gene31040:CDS
CACAAAATCTACCTCATCGG+TGG 0.633655 3.3:+78737775 MS.gene31040:CDS
GGGAAAATCTACGTCATCGG+TGG 0.638696 3.3:+78737916 MS.gene31040:CDS
GAGACGGTGGTTATTGTGGA+GGG 0.639572 3.3:-78737695 None:intergenic
GGAAGGGATGAGAGAGCGAG+CGG 0.643411 3.3:-78737614 None:intergenic
GCGCGGGAGAGCAACTGTTG+TGG 0.648340 3.3:+78738167 MS.gene31040:CDS
TACGCGATGGCGGATCGCGG+TGG 0.651378 3.3:+78738081 MS.gene31040:CDS
AACAGAAGAACAATGAACAA+TGG 0.652676 3.3:-78738502 None:intergenic
GTTTACGCGATGGCGGATCG+CGG 0.654239 3.3:+78738078 MS.gene31040:CDS
TGTGAAGAAAGGGTTGTGGA+AGG 0.655527 3.3:+78738239 MS.gene31040:CDS
AGACGGCAAAGTTTACGCGA+TGG 0.658808 3.3:+78738068 MS.gene31040:CDS
GGGTTGTGTGGTGAGAGCGT+GGG 0.659765 3.3:-78737537 None:intergenic
CGGCAAAGTTTACGCGATGG+CGG 0.661397 3.3:+78738071 MS.gene31040:CDS
GAAATGGATGCACGCTAGCG+CGG 0.679178 3.3:+78738041 MS.gene31040:CDS
AGTTTACCAAGGTTTCTGTG+TGG 0.681635 3.3:+78738282 MS.gene31040:CDS
GTTTGGATAAGAGTTTACCA+AGG 0.687199 3.3:+78738271 MS.gene31040:CDS
GACTAGGAACACTTTCCCAG+CGG 0.689950 3.3:-78738002 None:intergenic
CGTTGACTGAACCACCGATG+AGG 0.690906 3.3:-78737786 None:intergenic
GTAAGCGGAGCCGATTGTAG+GGG 0.695680 3.3:-78737740 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTGAATGCAAATAAGAA+GGG + chr3.3:78738360-78738379 MS.gene31040:CDS 20.0%
!! GATTATTTAGGGAAAATTAA+GGG + chr3.3:78738210-78738229 MS.gene31040:CDS 20.0%
!! TGATTATTTAGGGAAAATTA+AGG + chr3.3:78738209-78738228 MS.gene31040:CDS 20.0%
!! TGTATTGCTATGATTATTTA+GGG + chr3.3:78738199-78738218 MS.gene31040:CDS 20.0%
!! TTGTATTGCTATGATTATTT+AGG + chr3.3:78738198-78738217 MS.gene31040:CDS 20.0%
! ATTTGAATGCAAATAAGAAG+GGG + chr3.3:78738361-78738380 MS.gene31040:CDS 25.0%
! GAATTTGAATGCAAATAAGA+AGG + chr3.3:78738359-78738378 MS.gene31040:CDS 25.0%
!!! GTTTTGTTTGATCCTTATAA+TGG + chr3.3:78738105-78738124 MS.gene31040:CDS 25.0%
AAATAAGAAGGGGAAAGAAA+TGG + chr3.3:78738371-78738390 MS.gene31040:CDS 30.0%
AACAGAAGAACAATGAACAA+TGG - chr3.3:78738505-78738524 None:intergenic 30.0%
AAGAAGAAGAAGAATAAGGA+TGG + chr3.3:78738420-78738439 MS.gene31040:CDS 30.0%
AATGTTCTTTCTGTTCCTAA+AGG + chr3.3:78738474-78738493 MS.gene31040:CDS 30.0%
AGAAGAAGAAGAATAAGGAT+GGG + chr3.3:78738421-78738440 MS.gene31040:CDS 30.0%
TGTGAAGAAGAAGAAGAATA+AGG + chr3.3:78738416-78738435 MS.gene31040:CDS 30.0%
! ATTTTTCCAGATCAGCAAAT+TGG + chr3.3:78737953-78737972 MS.gene31040:CDS 30.0%
ATCCATTTCTCACGAATTTC+TGG - chr3.3:78738030-78738049 None:intergenic 35.0%
GAAGAAGAAGAATAAGGATG+GGG + chr3.3:78738422-78738441 MS.gene31040:CDS 35.0%
GCTGATCTGGAAAAATTATC+CGG - chr3.3:78737949-78737968 None:intergenic 35.0%
GTTTGGATAAGAGTTTACCA+AGG + chr3.3:78738271-78738290 MS.gene31040:CDS 35.0%
TGAACAATGGAAGATCCTTT+AGG - chr3.3:78738492-78738511 None:intergenic 35.0%
!! AAGGGTTTTGATGTGAAGAA+AGG + chr3.3:78738228-78738247 MS.gene31040:CDS 35.0%
!! AGGGTTTTGATGTGAAGAAA+GGG + chr3.3:78738229-78738248 MS.gene31040:CDS 35.0%
AATAAGGATGGGGAATTGTG+GGG + chr3.3:78738432-78738451 MS.gene31040:CDS 40.0%
AATTGTGGGGTGAAGTTTGT+TGG + chr3.3:78738445-78738464 MS.gene31040:CDS 40.0%
AGAATAAGGATGGGGAATTG+TGG + chr3.3:78738430-78738449 MS.gene31040:CDS 40.0%
AGGGGAAAGAAATGGAGATT+TGG + chr3.3:78738379-78738398 MS.gene31040:CDS 40.0%
AGTTTACCAAGGTTTCTGTG+TGG + chr3.3:78738282-78738301 MS.gene31040:CDS 40.0%
ATGTACCATCTCGTCATGTA+TGG + chr3.3:78737809-78737828 MS.gene31040:CDS 40.0%
CACCACAAAATCTACCTCAT+CGG + chr3.3:78737772-78737791 MS.gene31040:CDS 40.0%
CACCAGAAATTCGTGAGAAA+TGG + chr3.3:78738025-78738044 MS.gene31040:CDS 40.0%
GAATAAGGATGGGGAATTGT+GGG + chr3.3:78738431-78738450 MS.gene31040:CDS 40.0%
GTTTACCAAGGTTTCTGTGT+GGG + chr3.3:78738283-78738302 MS.gene31040:CDS 40.0%
TATTGTGGAGGGTGAAGAAT+TGG - chr3.3:78737687-78737706 None:intergenic 40.0%
TGGGAAATTGGTTGTGGTTT+GGG + chr3.3:78738326-78738345 MS.gene31040:CDS 40.0%
TTCCAGATCAGCAAATTGGT+CGG + chr3.3:78737957-78737976 MS.gene31040:CDS 40.0%
TTGATGTGAAGAAAGGGTTG+TGG + chr3.3:78738235-78738254 MS.gene31040:CDS 40.0%
TTTACCAAGGTTTCTGTGTG+GGG + chr3.3:78738284-78738303 MS.gene31040:CDS 40.0%
! CATTTCTCACGAATTTCTGG+TGG - chr3.3:78738027-78738046 None:intergenic 40.0%
! TGATCCTTATAATGGAGCGT+GGG + chr3.3:78738113-78738132 MS.gene31040:CDS 40.0%
! TTGATCCTTATAATGGAGCG+TGG + chr3.3:78738112-78738131 MS.gene31040:CDS 40.0%
!! AATGGATTGGTTTGGAAACG+AGG - chr3.3:78737567-78737586 None:intergenic 40.0%
!! ATGGATTGGTTTGGAAACGA+GGG - chr3.3:78737566-78737585 None:intergenic 40.0%
!! ATGGGATCAGGTTTGAGTTT+TGG - chr3.3:78737477-78737496 None:intergenic 40.0%
AGAGAGGTAGAGGATGTGTT+GGG - chr3.3:78737641-78737660 None:intergenic 45.0%
AGGATCCATACATGACGAGA+TGG - chr3.3:78737817-78737836 None:intergenic 45.0%
AGTTTATGGCTACGTCGTCT+GGG - chr3.3:78737504-78737523 None:intergenic 45.0%
CACAAAATCTACCTCATCGG+TGG + chr3.3:78737775-78737794 MS.gene31040:CDS 45.0%
CTACAATGGCTGATGTTGGT+GGG + chr3.3:78738307-78738326 MS.gene31040:CDS 45.0%
GAAGAGAGGAGAGAATGGAT+TGG - chr3.3:78737580-78737599 None:intergenic 45.0%
GACGGGAAAATCTACGTCAT+CGG + chr3.3:78737913-78737932 MS.gene31040:CDS 45.0%
GTGGAAGGAGTTGAAAGGTT+TGG + chr3.3:78738254-78738273 MS.gene31040:CDS 45.0%
GTGGGAAATTGGTTGTGGTT+TGG + chr3.3:78738325-78738344 MS.gene31040:CDS 45.0%
TAGCCATAAACTGCCTTGCA+CGG + chr3.3:78737512-78737531 MS.gene31040:CDS 45.0%
TGAAGAAGAGTGGAGAAGAG+AGG - chr3.3:78737594-78737613 None:intergenic 45.0%
TGTGAAGAAAGGGTTGTGGA+AGG + chr3.3:78738239-78738258 MS.gene31040:CDS 45.0%
! CACCGATGAGGTAGATTTTG+TGG - chr3.3:78737777-78737796 None:intergenic 45.0%
! CGATGAGGTAGATTTTGTGG+TGG - chr3.3:78737774-78737793 None:intergenic 45.0%
! TGTTGGTGGGAAATTGGTTG+TGG + chr3.3:78738320-78738339 MS.gene31040:CDS 45.0%
!! GAGGAGAGAATGGATTGGTT+TGG - chr3.3:78737575-78737594 None:intergenic 45.0%
!! TCACGAATTTCTGGTGGACT+AGG - chr3.3:78738021-78738040 None:intergenic 45.0%
!! TTGTGGTTTGGGAGTGTCAA+AGG + chr3.3:78738337-78738356 MS.gene31040:CDS 45.0%
AGACGGCAAAGTTTACGCGA+TGG + chr3.3:78738068-78738087 MS.gene31040:CDS 50.0%
AGAGGATGTGTTGGGTGGAA+GGG - chr3.3:78737633-78737652 None:intergenic 50.0%
AGCCATAAACTGCCTTGCAC+GGG + chr3.3:78737513-78737532 MS.gene31040:CDS 50.0%
ATTGTAGGGGAAGGAAGAGG+AGG - chr3.3:78737730-78737749 None:intergenic 50.0%
CAGATCAGCAAATTGGTCGG+AGG + chr3.3:78737960-78737979 MS.gene31040:CDS 50.0%
CAGTTTATGGCTACGTCGTC+TGG - chr3.3:78737505-78737524 None:intergenic 50.0%
CCTCTTCCTTCCCCTACAAT+CGG + chr3.3:78737730-78737749 MS.gene31040:CDS 50.0%
CTCTCCCACGCTCCATTATA+AGG - chr3.3:78738120-78738139 None:intergenic 50.0%
GACTAGGAACACTTTCCCAG+CGG - chr3.3:78738005-78738024 None:intergenic 50.0%
GAGACGGTGGTTATTGTGGA+GGG - chr3.3:78737698-78737717 None:intergenic 50.0%
GAGAGAGGTAGAGGATGTGT+TGG - chr3.3:78737642-78737661 None:intergenic 50.0%
GAGGGTGAAGAATTGGAGAG+AGG - chr3.3:78737680-78737699 None:intergenic 50.0%
GCTACAATGGCTGATGTTGG+TGG + chr3.3:78738306-78738325 MS.gene31040:CDS 50.0%
GGAGAGCAACTGTTGTGGAT+GGG + chr3.3:78738172-78738191 MS.gene31040:CDS 50.0%
GGAGGGAGCTTGATTTAGGT+TGG + chr3.3:78738145-78738164 MS.gene31040:CDS 50.0%
GGGAAAATCTACGTCATCGG+TGG + chr3.3:78737916-78737935 MS.gene31040:CDS 50.0%
GGGTTGTGGAAGGAGTTGAA+AGG + chr3.3:78738249-78738268 MS.gene31040:CDS 50.0%
GGTGAAGAATTGGAGAGAGG+TGG - chr3.3:78737677-78737696 None:intergenic 50.0%
GTGGAGAAGAGAGGAGAGAA+TGG - chr3.3:78737585-78737604 None:intergenic 50.0%
GTTGGGAGGGAGCTTGATTT+AGG + chr3.3:78738141-78738160 MS.gene31040:CDS 50.0%
GTTTCTGTGTGGGGCTACAA+TGG + chr3.3:78738293-78738312 MS.gene31040:CDS 50.0%
TAGAGGATGTGTTGGGTGGA+AGG - chr3.3:78737634-78737653 None:intergenic 50.0%
TTGTAGGGGAAGGAAGAGGA+GGG - chr3.3:78737729-78737748 None:intergenic 50.0%
! GGCTGATGTTGGTGGGAAAT+TGG + chr3.3:78738314-78738333 MS.gene31040:CDS 50.0%
! TGGTTTGGAAACGAGGGTGA+GGG - chr3.3:78737560-78737579 None:intergenic 50.0%
!! AGCTTGATTTAGGTTGGCGC+GGG + chr3.3:78738151-78738170 MS.gene31040:CDS 50.0%
!! CTCCGACCAATTTGCTGATC+TGG - chr3.3:78737962-78737981 None:intergenic 50.0%
!! GAGCTTGATTTAGGTTGGCG+CGG + chr3.3:78738150-78738169 MS.gene31040:CDS 50.0%
!! TTGGTTTGGAAACGAGGGTG+AGG - chr3.3:78737561-78737580 None:intergenic 50.0%
AAACGAGGGTGAGGGTTGTG+TGG - chr3.3:78737552-78737571 None:intergenic 55.0%
AGCGGTGGAATCGGCAATCA+AGG - chr3.3:78737837-78737856 None:intergenic 55.0%
AGGAACACTTTCCCAGCGGT+TGG - chr3.3:78738001-78738020 None:intergenic 55.0%
CCGATTGTAGGGGAAGGAAG+AGG - chr3.3:78737733-78737752 None:intergenic 55.0%
CGATCCTGTTACCAACCGCT+GGG + chr3.3:78737987-78738006 MS.gene31040:CDS 55.0%
CGGCAAAGTTTACGCGATGG+CGG + chr3.3:78738071-78738090 MS.gene31040:CDS 55.0%
CGTAAGCGGAGCCGATTGTA+GGG - chr3.3:78737744-78737763 None:intergenic 55.0%
GAAATGGATGCACGCTAGCG+CGG + chr3.3:78738041-78738060 MS.gene31040:CDS 55.0%
GACCCGTGCAAGGCAGTTTA+TGG - chr3.3:78737518-78737537 None:intergenic 55.0%
GAGGTAGAGGATGTGTTGGG+TGG - chr3.3:78737638-78737657 None:intergenic 55.0%
GGAGACGGTGGTTATTGTGG+AGG - chr3.3:78737699-78737718 None:intergenic 55.0%
GGAGGAGACGGTGGTTATTG+TGG - chr3.3:78737702-78737721 None:intergenic 55.0%
GGGAGAGCAACTGTTGTGGA+TGG + chr3.3:78738171-78738190 MS.gene31040:CDS 55.0%
GGGGCTACAATGGCTGATGT+TGG + chr3.3:78738303-78738322 MS.gene31040:CDS 55.0%
GTAAGCGGAGCCGATTGTAG+GGG - chr3.3:78737743-78737762 None:intergenic 55.0%
GTAGCCCCACACAGAAACCT+TGG - chr3.3:78738291-78738310 None:intergenic 55.0%
TATGGCTACGTCGTCTGGGA+GGG - chr3.3:78737500-78737519 None:intergenic 55.0%
TCGATCCTGTTACCAACCGC+TGG + chr3.3:78737986-78738005 MS.gene31040:CDS 55.0%
TTATGGCTACGTCGTCTGGG+AGG - chr3.3:78737501-78737520 None:intergenic 55.0%
! CGTTGACTGAACCACCGATG+AGG - chr3.3:78737789-78737808 None:intergenic 55.0%
!! CAGCTGCTGGTGTTATCGAC+GGG + chr3.3:78737896-78737915 MS.gene31040:CDS 55.0%
!! CTTTCCCAGCGGTTGGTAAC+AGG - chr3.3:78737994-78738013 None:intergenic 55.0%
!! GCAGCTGCTGGTGTTATCGA+CGG + chr3.3:78737895-78737914 MS.gene31040:CDS 55.0%
!! GTGGTGGATGACAGCGTAAG+CGG - chr3.3:78737758-78737777 None:intergenic 55.0%
!! TTGATTGCCGATTCCACCGC+TGG + chr3.3:78737836-78737855 MS.gene31040:CDS 55.0%
AAGGAAGAGGAGGGAGAGGG+AGG - chr3.3:78737720-78737739 None:intergenic 60.0%
AGGGTTGTGTGGTGAGAGCG+TGG - chr3.3:78737541-78737560 None:intergenic 60.0%
CTACGTCGTCTGGGAGGGAT+GGG - chr3.3:78737495-78737514 None:intergenic 60.0%
GAGCGAGCGGTGAAGAAGAG+TGG - chr3.3:78737604-78737623 None:intergenic 60.0%
GCGTAAGCGGAGCCGATTGT+AGG - chr3.3:78737745-78737764 None:intergenic 60.0%
GGAAGGGATGAGAGAGCGAG+CGG - chr3.3:78737617-78737636 None:intergenic 60.0%
GGGAAGGAAGAGGAGGGAGA+GGG - chr3.3:78737723-78737742 None:intergenic 60.0%
GTGTGCGGAGAGAGAGGTAG+AGG - chr3.3:78737651-78737670 None:intergenic 60.0%
! AATGGAGCGTGGGAGAGCGT+TGG + chr3.3:78738123-78738142 MS.gene31040:CDS 60.0%
! GGGTTGTGTGGTGAGAGCGT+GGG - chr3.3:78737540-78737559 None:intergenic 60.0%
!! ATGGAGCGTGGGAGAGCGTT+GGG + chr3.3:78738124-78738143 MS.gene31040:CDS 60.0%
!! GTTTACGCGATGGCGGATCG+CGG + chr3.3:78738078-78738097 MS.gene31040:CDS 60.0%
CACGCTAGCGCGGTCGTAGA+CGG + chr3.3:78738051-78738070 MS.gene31040:CDS 65.0%
CGTCATCGGTGGTTGCGTGC+CGG + chr3.3:78737927-78737946 MS.gene31040:CDS 65.0%
CGTCTGGGAGGGATGGGATC+AGG - chr3.3:78737489-78737508 None:intergenic 65.0%
GAATTCACGCGCCACCCGCA+TGG - chr3.3:78737875-78737894 None:intergenic 65.0%
GAGGAGGGAGAGGGAGGAGA+CGG - chr3.3:78737714-78737733 None:intergenic 65.0%
GCGCGGGAGAGCAACTGTTG+TGG + chr3.3:78738167-78738186 MS.gene31040:CDS 65.0%
GCGCGTGAATTCGCAGCTGC+TGG + chr3.3:78737883-78737902 MS.gene31040:CDS 65.0%
GCGGAGCCGATTGTAGGGGA+AGG - chr3.3:78737739-78737758 None:intergenic 65.0%
GCTACGTCGTCTGGGAGGGA+TGG - chr3.3:78737496-78737515 None:intergenic 65.0%
GGAGAGAGGTGGAGCGTGTG+CGG - chr3.3:78737666-78737685 None:intergenic 65.0%
GGGGAAGGAAGAGGAGGGAG+AGG - chr3.3:78737724-78737743 None:intergenic 65.0%
TGGAGCGTGTGCGGAGAGAG+AGG - chr3.3:78737657-78737676 None:intergenic 65.0%
!! AGCGTGGGAGAGCGTTGGGA+GGG + chr3.3:78738128-78738147 MS.gene31040:CDS 65.0%
CGGGGAGCCAGCGGTGGAAT+CGG - chr3.3:78737846-78737865 None:intergenic 70.0%
GAGGGAGAGGGAGGAGACGG+TGG - chr3.3:78737711-78737730 None:intergenic 70.0%
TCACGCGCCACCCGCATGGA+GGG - chr3.3:78737871-78737890 None:intergenic 70.0%
TTCACGCGCCACCCGCATGG+AGG - chr3.3:78737872-78737891 None:intergenic 70.0%
! GAGAGCGTGGGACCCGTGCA+AGG - chr3.3:78737528-78737547 None:intergenic 70.0%
!! CGATTCCACCGCTGGCTCCC+CGG + chr3.3:78737844-78737863 MS.gene31040:CDS 70.0%
!! GAGCGTGGGAGAGCGTTGGG+AGG + chr3.3:78738127-78738146 MS.gene31040:CDS 70.0%
!! TACGCGATGGCGGATCGCGG+TGG + chr3.3:78738081-78738100 MS.gene31040:CDS 70.0%
CCACCCGCATGGAGGGACCG+GGG - chr3.3:78737864-78737883 None:intergenic 75.0%
CGCCACCCGCATGGAGGGAC+CGG - chr3.3:78737866-78737885 None:intergenic 75.0%
GCCACCCGCATGGAGGGACC+GGG - chr3.3:78737865-78737884 None:intergenic 75.0%
GCTCCCCGGTCCCTCCATGC+GGG + chr3.3:78737858-78737877 MS.gene31040:CDS 75.0%
GGCTCCCCGGTCCCTCCATG+CGG + chr3.3:78737857-78737876 MS.gene31040:CDS 75.0%
TGGAGGGACCGGGGAGCCAG+CGG - chr3.3:78737855-78737874 None:intergenic 75.0%
! AGGGACCGGGGAGCCAGCGG+TGG - chr3.3:78737852-78737871 None:intergenic 80.0%
! CCCCGGTCCCTCCATGCGGG+TGG + chr3.3:78737861-78737880 MS.gene31040:CDS 80.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 78737463 78738533 78737463 ID=MS.gene31040
chr3.3 mRNA 78737463 78738533 78737463 ID=MS.gene31040.t1;Parent=MS.gene31040
chr3.3 exon 78737463 78738533 78737463 ID=MS.gene31040.t1.exon1;Parent=MS.gene31040.t1
chr3.3 CDS 78737463 78738533 78737463 ID=cds.MS.gene31040.t1;Parent=MS.gene31040.t1
Gene Sequence

>MS.gene31040

ATGAAGAAGAACCAAAACTCAAACCTGATCCCATCCCTCCCAGACGACGTAGCCATAAACTGCCTTGCACGGGTCCCACGCTCTCACCACACAACCCTCACCCTCGTTTCCAAACCAATCCATTCTCTCCTCTCTTCTCCACTCTTCTTCACCGCTCGCTCTCTCATCCCTTCCACCCAACACATCCTCTACCTCTCTCTCCGCACACGCTCCACCTCTCTCCAATTCTTCACCCTCCACAATAACCACCGTCTCCTCCCTCTCCCTCCTCTTCCTTCCCCTACAATCGGCTCCGCTTACGCTGTCATCCACCACAAAATCTACCTCATCGGTGGTTCAGTCAACGATGTACCATCTCGTCATGTATGGATCCTTGATTGCCGATTCCACCGCTGGCTCCCCGGTCCCTCCATGCGGGTGGCGCGTGAATTCGCAGCTGCTGGTGTTATCGACGGGAAAATCTACGTCATCGGTGGTTGCGTGCCGGATAATTTTTCCAGATCAGCAAATTGGTCGGAGGTTTTCGATCCTGTTACCAACCGCTGGGAAAGTGTTCCTAGTCCACCAGAAATTCGTGAGAAATGGATGCACGCTAGCGCGGTCGTAGACGGCAAAGTTTACGCGATGGCGGATCGCGGTGGTGTTTTGTTTGATCCTTATAATGGAGCGTGGGAGAGCGTTGGGAGGGAGCTTGATTTAGGTTGGCGCGGGAGAGCAACTGTTGTGGATGGGATTTTGTATTGCTATGATTATTTAGGGAAAATTAAGGGTTTTGATGTGAAGAAAGGGTTGTGGAAGGAGTTGAAAGGTTTGGATAAGAGTTTACCAAGGTTTCTGTGTGGGGCTACAATGGCTGATGTTGGTGGGAAATTGGTTGTGGTTTGGGAGTGTCAAAGGAATTTGAATGCAAATAAGAAGGGGAAAGAAATGGAGATTTGGTGTGCTGAGATTGATGTGAAGAAGAAGAAGAATAAGGATGGGGAATTGTGGGGTGAAGTTTGTTGGTTGAATAATGTTCTTTCTGTTCCTAAAGGATCTTCCATTGTTCATTGTTCTTCTGTTGCATTATGA
Protein sequence

>MS.gene31040.t1

MKKNQNSNLIPSLPDDVAINCLARVPRSHHTTLTLVSKPIHSLLSSPLFFTARSLIPSTQHILYLSLRTRSTSLQFFTLHNNHRLLPLPPLPSPTIGSAYAVIHHKIYLIGGSVNDVPSRHVWILDCRFHRWLPGPSMRVAREFAAAGVIDGKIYVIGGCVPDNFSRSANWSEVFDPVTNRWESVPSPPEIREKWMHASAVVDGKVYAMADRGGVLFDPYNGAWESVGRELDLGWRGRATVVDGILYCYDYLGKIKGFDVKKGLWKELKGLDKSLPRFLCGATMADVGGKLVVVWECQRNLNANKKGKEMEIWCAEIDVKKKKNKDGELWGEVCWLNNVLSVPKGSSIVHCSSVAL