Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073436.t1 | KEH37352.1 | 87.7 | 204 | 25 | 0 | 1 | 204 | 220 | 423 | 4.30E-95 | 357.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073436.t1 | A0A072V6D5 | 87.7 | 204 | 25 | 0 | 1 | 204 | 220 | 423 | 3.1e-95 | 357.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene073436.t1 | TR | mTERF |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049758 | MS.gene073436 | 0.805325 | 1.41E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene073436 | 0.80594 | 1.05E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene073436 | 0.831159 | 1.96E-55 | -1.69E-46 |
| MS.gene055277 | MS.gene073436 | 0.823288 | 1.50E-53 | -1.69E-46 |
| MS.gene055428 | MS.gene073436 | 0.816977 | 4.19E-52 | -1.69E-46 |
| MS.gene057121 | MS.gene073436 | 0.813909 | 2.02E-51 | -1.69E-46 |
| MS.gene058002 | MS.gene073436 | 0.808349 | 3.24E-50 | -1.69E-46 |
| MS.gene05811 | MS.gene073436 | 0.820244 | 7.60E-53 | -1.69E-46 |
| MS.gene059518 | MS.gene073436 | 0.820953 | 5.22E-53 | -1.69E-46 |
| MS.gene05984 | MS.gene073436 | 0.817835 | 2.68E-52 | -1.69E-46 |
| MS.gene060476 | MS.gene073436 | 0.806759 | 7.04E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene073436 | 0.814675 | 1.37E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073436.t1 | MTR_2g438010 | 87.745 | 204 | 25 | 0 | 1 | 204 | 220 | 423 | 4.71e-128 | 367 |
| MS.gene073436.t1 | MTR_2g076320 | 90.196 | 204 | 20 | 0 | 1 | 204 | 200 | 403 | 5.31e-128 | 366 |
| MS.gene073436.t1 | MTR_2g437990 | 85.784 | 204 | 29 | 0 | 1 | 204 | 199 | 402 | 6.38e-125 | 359 |
| MS.gene073436.t1 | MTR_2g437940 | 82.353 | 204 | 36 | 0 | 1 | 204 | 171 | 374 | 1.27e-117 | 339 |
| MS.gene073436.t1 | MTR_2g437960 | 72.414 | 203 | 56 | 0 | 1 | 203 | 203 | 405 | 2.15e-104 | 306 |
| MS.gene073436.t1 | MTR_2g437960 | 72.637 | 201 | 55 | 0 | 1 | 201 | 203 | 403 | 5.09e-103 | 304 |
| MS.gene073436.t1 | MTR_2g437120 | 73.980 | 196 | 50 | 1 | 1 | 196 | 201 | 395 | 1.94e-97 | 289 |
| MS.gene073436.t1 | MTR_2g437170 | 70.588 | 204 | 58 | 1 | 1 | 202 | 207 | 410 | 4.00e-97 | 288 |
| MS.gene073436.t1 | MTR_2g438020 | 72.362 | 199 | 54 | 1 | 3 | 201 | 256 | 453 | 6.60e-96 | 288 |
| MS.gene073436.t1 | MTR_2g437240 | 70.936 | 203 | 59 | 0 | 1 | 203 | 215 | 417 | 1.01e-95 | 285 |
| MS.gene073436.t1 | MTR_2g437130 | 67.500 | 200 | 65 | 0 | 1 | 200 | 188 | 387 | 2.19e-93 | 278 |
| MS.gene073436.t1 | MTR_2g437200 | 74.457 | 184 | 47 | 0 | 1 | 184 | 215 | 398 | 2.43e-93 | 278 |
| MS.gene073436.t1 | MTR_2g437150 | 68.844 | 199 | 62 | 0 | 1 | 199 | 207 | 405 | 2.57e-93 | 278 |
| MS.gene073436.t1 | MTR_2g437160 | 67.513 | 197 | 64 | 0 | 1 | 197 | 212 | 408 | 4.14e-91 | 273 |
| MS.gene073436.t1 | MTR_2g437180 | 69.347 | 199 | 59 | 1 | 1 | 199 | 199 | 395 | 9.88e-91 | 271 |
| MS.gene073436.t1 | MTR_2g437160 | 66.146 | 192 | 65 | 0 | 6 | 197 | 126 | 317 | 4.01e-86 | 257 |
| MS.gene073436.t1 | MTR_2g437100 | 70.652 | 184 | 54 | 0 | 1 | 184 | 212 | 395 | 9.09e-85 | 256 |
| MS.gene073436.t1 | MTR_2g437060 | 55.208 | 192 | 86 | 0 | 1 | 192 | 202 | 393 | 6.51e-72 | 223 |
| MS.gene073436.t1 | MTR_2g436400 | 53.723 | 188 | 87 | 0 | 1 | 188 | 194 | 381 | 6.08e-68 | 213 |
| MS.gene073436.t1 | MTR_2g437080 | 51.020 | 196 | 96 | 0 | 1 | 196 | 187 | 382 | 1.32e-67 | 212 |
| MS.gene073436.t1 | MTR_2g437020 | 55.155 | 194 | 84 | 2 | 1 | 192 | 186 | 378 | 1.87e-67 | 211 |
| MS.gene073436.t1 | MTR_4g119550 | 51.042 | 192 | 94 | 0 | 1 | 192 | 197 | 388 | 1.24e-66 | 209 |
| MS.gene073436.t1 | MTR_2g436440 | 53.646 | 192 | 89 | 0 | 1 | 192 | 193 | 384 | 1.40e-66 | 209 |
| MS.gene073436.t1 | MTR_2g437030 | 50.510 | 196 | 97 | 0 | 1 | 196 | 273 | 468 | 7.05e-66 | 210 |
| MS.gene073436.t1 | MTR_2g437040 | 51.020 | 196 | 96 | 0 | 1 | 196 | 187 | 382 | 1.10e-64 | 204 |
| MS.gene073436.t1 | MTR_2g437090 | 50.292 | 171 | 85 | 0 | 27 | 197 | 1 | 171 | 1.06e-57 | 179 |
| MS.gene073436.t1 | MTR_2g436460 | 51.613 | 186 | 89 | 1 | 1 | 185 | 192 | 377 | 2.85e-56 | 182 |
| MS.gene073436.t1 | MTR_4g120380 | 47.802 | 182 | 95 | 0 | 1 | 182 | 189 | 370 | 5.68e-56 | 181 |
| MS.gene073436.t1 | MTR_2g437260 | 45.550 | 191 | 102 | 2 | 1 | 189 | 181 | 371 | 4.09e-54 | 177 |
| MS.gene073436.t1 | MTR_4g120380 | 49.383 | 162 | 82 | 0 | 1 | 162 | 189 | 350 | 5.96e-51 | 170 |
| MS.gene073436.t1 | MTR_4g120380 | 33.742 | 163 | 86 | 5 | 5 | 150 | 260 | 417 | 1.04e-18 | 83.6 |
| MS.gene073436.t1 | MTR_4g119580 | 46.409 | 181 | 97 | 0 | 1 | 181 | 189 | 369 | 1.02e-49 | 166 |
| MS.gene073436.t1 | MTR_2g019840 | 44.385 | 187 | 100 | 3 | 5 | 189 | 192 | 376 | 1.03e-43 | 150 |
| MS.gene073436.t1 | MTR_2g019810 | 44.624 | 186 | 99 | 3 | 1 | 184 | 176 | 359 | 6.06e-42 | 145 |
| MS.gene073436.t1 | MTR_4g119570 | 39.444 | 180 | 76 | 1 | 1 | 180 | 81 | 227 | 1.63e-36 | 127 |
| MS.gene073436.t1 | MTR_3g085240 | 55.556 | 90 | 23 | 1 | 86 | 175 | 176 | 248 | 2.46e-23 | 94.0 |
| MS.gene073436.t1 | MTR_3g450500 | 30.556 | 180 | 123 | 2 | 4 | 181 | 190 | 369 | 2.37e-21 | 90.5 |
| MS.gene073436.t1 | MTR_4g007490 | 30.000 | 180 | 122 | 3 | 5 | 181 | 189 | 367 | 5.59e-18 | 81.3 |
| MS.gene073436.t1 | MTR_8g081000 | 27.273 | 176 | 125 | 2 | 31 | 204 | 234 | 408 | 3.18e-17 | 79.3 |
| MS.gene073436.t1 | MTR_8g081000 | 27.815 | 151 | 109 | 0 | 31 | 181 | 234 | 384 | 5.33e-17 | 78.6 |
| MS.gene073436.t1 | MTR_8g081000 | 27.815 | 151 | 109 | 0 | 31 | 181 | 234 | 384 | 5.66e-17 | 78.6 |
| MS.gene073436.t1 | MTR_2g436380 | 51.667 | 60 | 29 | 0 | 27 | 86 | 1 | 60 | 1.55e-16 | 76.3 |
| MS.gene073436.t1 | MTR_8g080990 | 26.705 | 176 | 127 | 1 | 5 | 178 | 193 | 368 | 1.74e-15 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073436.t1 | AT5G07900 | 33.696 | 184 | 119 | 3 | 1 | 181 | 216 | 399 | 7.37e-29 | 111 |
| MS.gene073436.t1 | AT5G64950 | 32.275 | 189 | 111 | 4 | 5 | 181 | 192 | 375 | 5.77e-20 | 87.0 |
| MS.gene073436.t1 | AT1G21150 | 29.444 | 180 | 124 | 2 | 3 | 179 | 169 | 348 | 8.13e-18 | 80.5 |
| MS.gene073436.t1 | AT1G21150 | 32.432 | 148 | 98 | 1 | 3 | 148 | 205 | 352 | 8.32e-18 | 80.9 |
| MS.gene073436.t1 | AT1G21150 | 32.432 | 148 | 98 | 1 | 3 | 148 | 269 | 416 | 1.37e-17 | 80.5 |
| MS.gene073436.t1 | AT1G61990 | 28.922 | 204 | 106 | 4 | 16 | 181 | 206 | 408 | 8.52e-16 | 75.1 |
| MS.gene073436.t1 | AT1G61990 | 28.922 | 204 | 106 | 4 | 16 | 181 | 206 | 408 | 8.52e-16 | 75.1 |
| MS.gene073436.t1 | AT1G61980 | 29.508 | 183 | 93 | 3 | 21 | 167 | 217 | 399 | 2.03e-15 | 74.3 |
| MS.gene073436.t1 | AT1G61980 | 29.508 | 183 | 93 | 3 | 21 | 167 | 217 | 399 | 2.03e-15 | 74.3 |
| MS.gene073436.t1 | AT1G61980 | 29.508 | 183 | 93 | 3 | 21 | 167 | 217 | 399 | 2.03e-15 | 74.3 |
| MS.gene073436.t1 | AT1G61970 | 25.683 | 183 | 100 | 4 | 21 | 167 | 217 | 399 | 1.36e-11 | 63.2 |
| MS.gene073436.t1 | AT1G61970 | 25.683 | 183 | 100 | 4 | 21 | 167 | 217 | 399 | 1.36e-11 | 63.2 |
| MS.gene073436.t1 | AT1G61970 | 25.683 | 183 | 100 | 4 | 21 | 167 | 217 | 399 | 1.36e-11 | 63.2 |
| MS.gene073436.t1 | AT1G61970 | 25.683 | 183 | 100 | 4 | 21 | 167 | 217 | 399 | 1.36e-11 | 63.2 |
| MS.gene073436.t1 | AT1G61970 | 25.683 | 183 | 100 | 4 | 21 | 167 | 217 | 399 | 1.36e-11 | 63.2 |
| MS.gene073436.t1 | AT1G61970 | 25.683 | 183 | 100 | 4 | 21 | 167 | 217 | 399 | 1.36e-11 | 63.2 |
| MS.gene073436.t1 | AT1G61970 | 25.683 | 183 | 100 | 4 | 21 | 167 | 217 | 399 | 1.36e-11 | 63.2 |
Find 41 sgRNAs with CRISPR-Local
Find 49 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAATTTGATGGTTGATTT+TGG | 0.116384 | 2.4:-53782280 | None:intergenic |
| CGAACAAGGCCATCTATATT+TGG | 0.170334 | 2.4:-53782226 | MS.gene073436:CDS |
| GACCCTTCAACGACCGCTTT+TGG | 0.242026 | 2.4:-53782154 | MS.gene073436:CDS |
| AAGATGTTATTCGAGTATTT+AGG | 0.310453 | 2.4:-53782045 | MS.gene073436:CDS |
| AACTGATTTGATTAAGTCAT+TGG | 0.334181 | 2.4:-53782200 | MS.gene073436:CDS |
| TTGGAGGAAGTTAAGGGCTT+AGG | 0.351722 | 2.4:-53782181 | MS.gene073436:CDS |
| TAAGTCATTGGAGGAAGTTA+AGG | 0.400812 | 2.4:-53782188 | MS.gene073436:CDS |
| AAGTTGACGTCTTTATCAAA+TGG | 0.402844 | 2.4:-53782081 | MS.gene073436:CDS |
| AATGGATGAGTAACATACTT+TGG | 0.408464 | 2.4:-53782111 | MS.gene073436:CDS |
| TTGGGTAAATCAAATGGGTT+GGG | 0.411373 | 2.4:-53781966 | MS.gene073436:CDS |
| TGGAGGAAGTTAAGGGCTTA+GGG | 0.415402 | 2.4:-53782180 | MS.gene073436:CDS |
| AGTTGACGTCTTTATCAAAT+GGG | 0.424416 | 2.4:-53782080 | MS.gene073436:CDS |
| AATTGCAAAACTGAGGCTCT+TGG | 0.425012 | 2.4:+53781881 | None:intergenic |
| GTCCCAAAAGCGGTCGTTGA+AGG | 0.427635 | 2.4:+53782151 | None:intergenic |
| AGATCAATACATTACACATT+TGG | 0.428401 | 2.4:+53781676 | None:intergenic |
| TCAGTTGAACCAAATATAGA+TGG | 0.441181 | 2.4:+53782217 | None:intergenic |
| AAGTCATTGGAGGAAGTTAA+GGG | 0.446904 | 2.4:-53782187 | MS.gene073436:CDS |
| ATGGATGAGTAACATACTTT+GGG | 0.450437 | 2.4:-53782110 | MS.gene073436:CDS |
| TTTGGGTAAATCAAATGGGT+TGG | 0.461072 | 2.4:-53781967 | MS.gene073436:CDS |
| TATGTTACTCATCCATTGCT+TGG | 0.480966 | 2.4:+53782117 | None:intergenic |
| TCAAATGGGTTGGGATCCCT+TGG | 0.493727 | 2.4:-53781957 | MS.gene073436:CDS |
| TCAATACATTACACATTTGG+TGG | 0.494508 | 2.4:+53781679 | None:intergenic |
| AAACTAAAAGAAAACATAAG+TGG | 0.504288 | 2.4:+53781920 | None:intergenic |
| GAAAGGTTTGCGAAAGAAGA+AGG | 0.527252 | 2.4:-53781849 | MS.gene073436:CDS |
| ATATCCTCAGAATAAGCAAA+TGG | 0.530372 | 2.4:+53781812 | None:intergenic |
| TACATTACACATTTGGTGGA+TGG | 0.530490 | 2.4:+53781683 | None:intergenic |
| TGATTTGATTAAGTCATTGG+AGG | 0.558497 | 2.4:-53782197 | MS.gene073436:CDS |
| TTGCTAGATTGCTTCGAACA+AGG | 0.560619 | 2.4:-53782240 | MS.gene073436:CDS |
| TGGAGAATTAATAAGTGCCA+AGG | 0.561400 | 2.4:+53781940 | None:intergenic |
| TTTCAGCTTTAAGGAGGAGT+CGG | 0.563069 | 2.4:-53781771 | MS.gene073436:CDS |
| ACGTCTTTATCAAATGGGGT+TGG | 0.563703 | 2.4:-53782075 | MS.gene073436:CDS |
| TCCCAAAAGCGGTCGTTGAA+GGG | 0.570224 | 2.4:+53782152 | None:intergenic |
| TAGACCATTTGCTTATTCTG+AGG | 0.571730 | 2.4:-53781816 | MS.gene073436:CDS |
| ATTGACGTCAACATCAAACT+AGG | 0.584788 | 2.4:+53782016 | None:intergenic |
| CTGCTTTGGTGACCAAGCAA+TGG | 0.599773 | 2.4:-53782129 | MS.gene073436:CDS |
| GTTGACGTCTTTATCAAATG+GGG | 0.617322 | 2.4:-53782079 | MS.gene073436:CDS |
| CAAAAGAAATTGCAAAACTG+AGG | 0.625549 | 2.4:+53781874 | None:intergenic |
| GGAGAATTAATAAGTGCCAA+GGG | 0.628472 | 2.4:+53781941 | None:intergenic |
| TGTTCGAAGCAATCTAGCAA+TGG | 0.646698 | 2.4:+53782243 | None:intergenic |
| AATGAAACTTGCAAATACAA+CGG | 0.655557 | 2.4:-53781720 | MS.gene073436:CDS |
| CACCAAAGCAGTCCCAAAAG+CGG | 0.659565 | 2.4:+53782141 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTCTTTTAGTTTATCTAAA+AGG | - | chr2.4:53782040-53782059 | MS.gene073436:CDS | 15.0% |
| !! | AAACTAAAAGAAAACATAAG+TGG | + | chr2.4:53782033-53782052 | None:intergenic | 20.0% |
| ! | AAGATGTTATTCGAGTATTT+AGG | - | chr2.4:53781905-53781924 | MS.gene073436:CDS | 25.0% |
| ! | AATGAAACTTGCAAATACAA+CGG | - | chr2.4:53782230-53782249 | MS.gene073436:CDS | 25.0% |
| !! | TTGCAATTTCTTTTGATGAA+AGG | - | chr2.4:53782084-53782103 | MS.gene073436:CDS | 25.0% |
| !!! | AACTGATTTGATTAAGTCAT+TGG | - | chr2.4:53781750-53781769 | MS.gene073436:CDS | 25.0% |
| !!! | AGTTTTTGGGTAAATCAAAT+GGG | - | chr2.4:53781979-53781998 | MS.gene073436:CDS | 25.0% |
| !!! | TAATCTGTTGATGAGTTTTT+GGG | - | chr2.4:53781966-53781985 | MS.gene073436:CDS | 25.0% |
| !!! | TTAATCTGTTGATGAGTTTT+TGG | - | chr2.4:53781965-53781984 | MS.gene073436:CDS | 25.0% |
| AAGTTGACGTCTTTATCAAA+TGG | - | chr2.4:53781869-53781888 | MS.gene073436:CDS | 30.0% | |
| AATGGATGAGTAACATACTT+TGG | - | chr2.4:53781839-53781858 | MS.gene073436:CDS | 30.0% | |
| AGTTGACGTCTTTATCAAAT+GGG | - | chr2.4:53781870-53781889 | MS.gene073436:CDS | 30.0% | |
| ATATCCTCAGAATAAGCAAA+TGG | + | chr2.4:53782141-53782160 | None:intergenic | 30.0% | |
| ATGGATGAGTAACATACTTT+GGG | - | chr2.4:53781840-53781859 | MS.gene073436:CDS | 30.0% | |
| CAAAAGAAATTGCAAAACTG+AGG | + | chr2.4:53782079-53782098 | None:intergenic | 30.0% | |
| TCAATACATTACACATTTGG+TGG | + | chr2.4:53782274-53782293 | None:intergenic | 30.0% | |
| TCAGTTGAACCAAATATAGA+TGG | + | chr2.4:53781736-53781755 | None:intergenic | 30.0% | |
| TGATTTGATTAAGTCATTGG+AGG | - | chr2.4:53781753-53781772 | MS.gene073436:CDS | 30.0% | |
| !!! | GAGTTTTTGGGTAAATCAAA+TGG | - | chr2.4:53781978-53781997 | MS.gene073436:CDS | 30.0% |
| AAGTCATTGGAGGAAGTTAA+GGG | - | chr2.4:53781763-53781782 | MS.gene073436:CDS | 35.0% | |
| ATTGACGTCAACATCAAACT+AGG | + | chr2.4:53781937-53781956 | None:intergenic | 35.0% | |
| GGAGAATTAATAAGTGCCAA+GGG | + | chr2.4:53782012-53782031 | None:intergenic | 35.0% | |
| GTTGACGTCTTTATCAAATG+GGG | - | chr2.4:53781871-53781890 | MS.gene073436:CDS | 35.0% | |
| TAAGTCATTGGAGGAAGTTA+AGG | - | chr2.4:53781762-53781781 | MS.gene073436:CDS | 35.0% | |
| TAGACCATTTGCTTATTCTG+AGG | - | chr2.4:53782134-53782153 | MS.gene073436:CDS | 35.0% | |
| TATGTTACTCATCCATTGCT+TGG | + | chr2.4:53781836-53781855 | None:intergenic | 35.0% | |
| TGGAGAATTAATAAGTGCCA+AGG | + | chr2.4:53782013-53782032 | None:intergenic | 35.0% | |
| TTTGGGTAAATCAAATGGGT+TGG | - | chr2.4:53781983-53782002 | MS.gene073436:CDS | 35.0% | |
| ! | CAAGTGTGTTTTCAGCTTTA+AGG | - | chr2.4:53782170-53782189 | MS.gene073436:CDS | 35.0% |
| ! | TACATTACACATTTGGTGGA+TGG | + | chr2.4:53782270-53782289 | None:intergenic | 35.0% |
| ! | TTGGGTAAATCAAATGGGTT+GGG | - | chr2.4:53781984-53782003 | MS.gene073436:CDS | 35.0% |
| AATTGCAAAACTGAGGCTCT+TGG | + | chr2.4:53782072-53782091 | None:intergenic | 40.0% | |
| ACGTCTTTATCAAATGGGGT+TGG | - | chr2.4:53781875-53781894 | MS.gene073436:CDS | 40.0% | |
| CGAACAAGGCCATCTATATT+TGG | - | chr2.4:53781724-53781743 | MS.gene073436:CDS | 40.0% | |
| GAAAGGTTTGCGAAAGAAGA+AGG | - | chr2.4:53782101-53782120 | MS.gene073436:CDS | 40.0% | |
| TGTTCGAAGCAATCTAGCAA+TGG | + | chr2.4:53781710-53781729 | None:intergenic | 40.0% | |
| TTGCTAGATTGCTTCGAACA+AGG | - | chr2.4:53781710-53781729 | MS.gene073436:CDS | 40.0% | |
| !! | TTTCAGCTTTAAGGAGGAGT+CGG | - | chr2.4:53782179-53782198 | MS.gene073436:CDS | 40.0% |
| !!! | GTGTGTTTTCAGCTTTAAGG+AGG | - | chr2.4:53782173-53782192 | MS.gene073436:CDS | 40.0% |
| TGGAGGAAGTTAAGGGCTTA+GGG | - | chr2.4:53781770-53781789 | MS.gene073436:CDS | 45.0% | |
| TTGGAGGAAGTTAAGGGCTT+AGG | - | chr2.4:53781769-53781788 | MS.gene073436:CDS | 45.0% | |
| CACCAAAGCAGTCCCAAAAG+CGG | + | chr2.4:53781812-53781831 | None:intergenic | 50.0% | |
| TCCCAAAAGCGGTCGTTGAA+GGG | + | chr2.4:53781801-53781820 | None:intergenic | 50.0% | |
| ! | CTGCTTTGGTGACCAAGCAA+TGG | - | chr2.4:53781821-53781840 | MS.gene073436:CDS | 50.0% |
| !! | ACCCTTCAACGACCGCTTTT+GGG | - | chr2.4:53781797-53781816 | MS.gene073436:CDS | 50.0% |
| !! | TCAAATGGGTTGGGATCCCT+TGG | - | chr2.4:53781993-53782012 | MS.gene073436:CDS | 50.0% |
| GTCCCAAAAGCGGTCGTTGA+AGG | + | chr2.4:53781802-53781821 | None:intergenic | 55.0% | |
| ! | GACCCTTCAACGACCGCTTT+TGG | - | chr2.4:53781796-53781815 | MS.gene073436:CDS | 55.0% |
| !!! | GACCGCTTTTGGGACTGCTT+TGG | - | chr2.4:53781807-53781826 | MS.gene073436:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 53781679 | 53782293 | 53781679 | ID=MS.gene073436 |
| chr2.4 | mRNA | 53781679 | 53782293 | 53781679 | ID=MS.gene073436.t1;Parent=MS.gene073436 |
| chr2.4 | exon | 53781679 | 53782293 | 53781679 | ID=MS.gene073436.t1.exon1;Parent=MS.gene073436.t1 |
| chr2.4 | CDS | 53781679 | 53782293 | 53781679 | ID=cds.MS.gene073436.t1;Parent=MS.gene073436.t1 |
| Gene Sequence |
| Protein sequence |
