AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene073562

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene073562.t1 MTR_1g048940 95.198 354 17 0 1 354 1 354 0.0 709
MS.gene073562.t1 MTR_7g081710 49.288 351 172 4 2 349 3 350 2.23e-122 357
MS.gene073562.t1 MTR_1g062110 41.108 343 183 7 18 346 32 369 7.52e-87 267
MS.gene073562.t1 MTR_7g102820 39.031 351 187 8 18 346 31 376 5.98e-83 257
MS.gene073562.t1 MTR_8g024120 35.329 334 207 5 20 349 14 342 4.34e-73 230
MS.gene073562.t1 MTR_3g092890 36.527 334 200 5 22 351 13 338 3.41e-72 228
MS.gene073562.t1 MTR_1g062110 40.502 279 148 6 18 282 32 306 1.27e-64 208
MS.gene073562.t1 MTR_1g070135 35.161 310 192 7 24 329 15 319 3.82e-63 205
MS.gene073562.t1 MTR_1g070120 34.395 314 197 7 20 329 11 319 1.93e-62 203
MS.gene073562.t1 MTR_1g070085 34.177 316 198 7 20 330 10 320 5.01e-62 202
MS.gene073562.t1 MTR_1g070085 34.177 316 198 7 20 330 10 320 5.01e-62 202
MS.gene073562.t1 MTR_5g065010 35.000 300 184 6 45 339 39 332 3.09e-61 200
MS.gene073562.t1 MTR_5g032870 36.728 324 194 8 16 331 7 327 1.36e-59 196
MS.gene073562.t1 MTR_4g093840 36.334 311 185 9 45 349 62 365 2.88e-59 195
MS.gene073562.t1 MTR_1g070080 32.508 323 207 7 20 336 10 327 1.14e-58 193
MS.gene073562.t1 MTR_5g032880 36.111 324 196 7 16 331 345 665 1.96e-57 198
MS.gene073562.t1 MTR_5g032880 34.985 323 193 8 16 331 7 319 2.65e-54 189
MS.gene073562.t1 MTR_3g091350 34.314 306 191 6 43 344 57 356 8.88e-56 186
MS.gene073562.t1 MTR_3g091360 33.866 313 197 6 39 347 46 352 8.38e-55 184
MS.gene073562.t1 MTR_6g015950 34.076 314 193 6 22 329 14 319 3.75e-53 179
MS.gene073562.t1 MTR_0009s0050 31.977 344 218 9 18 354 18 352 3.76e-53 179
MS.gene073562.t1 MTR_0009s0050 31.977 344 218 9 18 354 18 352 4.10e-53 179
MS.gene073562.t1 MTR_1g070135 37.548 261 146 8 24 272 15 270 3.36e-51 172
MS.gene073562.t1 MTR_3g063180 33.140 344 209 11 18 348 15 350 8.54e-51 173
MS.gene073562.t1 MTR_5g059130 31.307 329 207 7 12 330 8 327 6.74e-50 170
MS.gene073562.t1 MTR_7g062570 34.897 341 195 12 22 349 29 355 1.73e-49 170
MS.gene073562.t1 MTR_7g016090 29.819 332 217 5 3 331 4 322 2.15e-49 169
MS.gene073562.t1 MTR_7g016080 31.250 336 205 6 3 333 2 316 2.63e-49 168
MS.gene073562.t1 MTR_7g016090 29.819 332 217 5 3 331 2 320 2.90e-49 168
MS.gene073562.t1 MTR_2g072910 32.277 347 208 11 16 349 21 353 3.87e-49 169
MS.gene073562.t1 MTR_5g048740 29.825 342 225 9 18 352 16 349 2.14e-48 167
MS.gene073562.t1 MTR_1g033810 31.445 353 206 10 19 352 18 353 2.46e-48 167
MS.gene073562.t1 MTR_2g072890 30.435 345 218 9 16 349 21 354 1.17e-47 165
MS.gene073562.t1 MTR_7g068650 33.133 332 201 9 18 333 20 346 1.28e-47 165
MS.gene073562.t1 MTR_5g048850 30.383 339 226 7 18 352 18 350 1.31e-47 164
MS.gene073562.t1 MTR_1g034120 32.219 329 198 7 24 330 4 329 1.54e-47 164
MS.gene073562.t1 MTR_8g064200 30.259 347 217 10 18 352 23 356 2.67e-47 164
MS.gene073562.t1 MTR_0009s0480 30.495 364 205 9 12 352 11 349 2.67e-47 164
MS.gene073562.t1 MTR_8g064200 30.259 347 217 10 18 352 28 361 3.27e-47 164
MS.gene073562.t1 MTR_1g034060 31.915 329 199 7 24 330 4 329 4.38e-47 163
MS.gene073562.t1 MTR_3g058610 30.345 290 195 5 12 297 6 292 5.43e-47 163
MS.gene073562.t1 MTR_4g015790 32.070 343 203 10 18 335 19 356 6.75e-47 163
MS.gene073562.t1 MTR_5g055680 28.142 366 230 8 4 354 5 352 1.73e-46 162
MS.gene073562.t1 MTR_5g048550 30.321 343 221 10 18 352 18 350 4.24e-46 160
MS.gene073562.t1 MTR_0328s0030 30.357 336 218 7 18 346 16 342 8.84e-46 160
MS.gene073562.t1 MTR_5g048570 27.941 340 235 6 18 354 18 350 1.09e-45 159
MS.gene073562.t1 MTR_1g070085 33.878 245 156 4 89 330 1 242 1.19e-45 157
MS.gene073562.t1 MTR_5g055900 28.182 330 231 4 22 349 22 347 2.74e-45 159
MS.gene073562.t1 MTR_3g026150 30.794 315 195 11 44 349 59 359 6.85e-45 157
MS.gene073562.t1 MTR_5g055820 30.000 340 221 10 18 349 18 348 9.71e-45 157
MS.gene073562.t1 MTR_2g437380 30.925 346 201 9 24 349 28 355 1.08e-44 157
MS.gene073562.t1 MTR_4g087090 31.646 316 202 6 27 329 11 325 1.39e-44 157
MS.gene073562.t1 MTR_5g048470 30.671 313 192 9 45 346 53 351 3.04e-44 156
MS.gene073562.t1 MTR_5g055800 29.714 350 225 9 12 352 12 349 3.54e-44 155
MS.gene073562.t1 MTR_5g055690 30.794 315 202 7 43 349 42 348 4.50e-44 155
MS.gene073562.t1 MTR_7g062580 33.882 304 181 9 34 330 47 337 4.80e-44 155
MS.gene073562.t1 MTR_8g075890 30.769 286 190 5 16 297 11 292 7.33e-44 155
MS.gene073562.t1 MTR_5g022020 31.765 255 171 3 45 297 39 292 7.40e-44 155
MS.gene073562.t1 MTR_3g072810 31.646 316 201 9 21 329 14 321 7.87e-44 154
MS.gene073562.t1 MTR_7g062550 34.056 323 192 9 34 349 52 360 8.12e-44 155
MS.gene073562.t1 MTR_1g093110 29.755 326 203 7 21 330 40 355 8.38e-44 155
MS.gene073562.t1 MTR_1g070100 33.610 241 154 4 93 330 1 238 9.53e-44 152
MS.gene073562.t1 MTR_3g072820 29.193 322 219 6 13 329 7 324 1.07e-43 154
MS.gene073562.t1 MTR_1g034140 31.613 310 193 6 27 322 7 311 1.88e-43 153
MS.gene073562.t1 MTR_7g063730 30.874 366 221 11 1 349 14 364 2.64e-43 154
MS.gene073562.t1 MTR_0009s0050 35.268 224 134 5 134 354 39 254 1.63e-42 149
MS.gene073562.t1 MTR_8g009080 30.225 311 205 6 48 353 97 400 2.27e-42 152
MS.gene073562.t1 MTR_0009s0050 35.268 224 134 5 134 354 39 254 2.35e-42 148
MS.gene073562.t1 MTR_7g062600 31.889 323 200 12 34 349 43 352 3.14e-42 150
MS.gene073562.t1 MTR_2g068840 30.435 345 222 11 18 352 27 363 6.75e-42 150
MS.gene073562.t1 MTR_8g075830 30.769 286 190 5 16 297 11 292 6.75e-42 150
MS.gene073562.t1 MTR_8g074050 29.808 312 202 9 45 349 52 353 7.51e-42 149
MS.gene073562.t1 MTR_5g059140 30.625 320 191 9 19 318 7 315 1.43e-41 148
MS.gene073562.t1 MTR_8g074070 31.930 285 180 8 45 322 52 329 3.05e-41 148
MS.gene073562.t1 MTR_8g009160 32.432 296 186 9 45 333 60 348 3.99e-41 148
MS.gene073562.t1 MTR_1g093120 28.228 333 212 7 30 344 42 365 1.03e-40 147
MS.gene073562.t1 MTR_2g069010 29.605 304 201 4 44 339 68 366 1.39e-40 147
MS.gene073562.t1 MTR_2g069020 31.023 303 195 6 44 339 66 361 1.58e-40 146
MS.gene073562.t1 MTR_1g043760 32.024 331 191 12 18 331 25 338 1.82e-40 146
MS.gene073562.t1 MTR_2g069020 31.023 303 195 6 44 339 66 361 2.62e-40 146
MS.gene073562.t1 MTR_1g093140 27.761 335 220 6 23 344 48 373 2.77e-40 146
MS.gene073562.t1 MTR_3g070860 29.825 342 217 13 24 351 26 358 3.53e-40 145
MS.gene073562.t1 MTR_5g082750 30.178 338 219 10 24 350 25 356 3.75e-40 145
MS.gene073562.t1 MTR_8g009170 30.847 295 191 9 45 332 60 348 4.82e-40 145
MS.gene073562.t1 MTR_8g009090 30.581 327 187 14 30 333 39 348 7.87e-40 144
MS.gene073562.t1 MTR_8g028435 30.915 317 199 12 30 333 39 348 7.95e-40 144
MS.gene073562.t1 MTR_7g029655 30.769 325 207 7 18 330 33 351 8.36e-40 144
MS.gene073562.t1 MTR_8g009110 31.230 317 199 11 30 333 39 349 1.06e-39 144
MS.gene073562.t1 MTR_4g087140 28.399 331 213 7 21 330 1 328 2.09e-39 143
MS.gene073562.t1 MTR_3g117420 29.655 290 180 8 45 322 52 329 2.14e-39 143
MS.gene073562.t1 MTR_2g069210 31.081 296 187 8 45 332 64 350 3.04e-39 143
MS.gene073562.t1 MTR_0056s0160 34.685 222 134 5 134 352 22 235 3.25e-39 139
MS.gene073562.t1 MTR_2g102570 29.530 298 192 5 49 330 39 334 5.72e-39 142
MS.gene073562.t1 MTR_8g062600 28.060 335 217 9 18 338 38 362 5.83e-39 142
MS.gene073562.t1 MTR_8g041620 30.702 342 215 11 18 346 38 370 8.76e-39 142
MS.gene073562.t1 MTR_2g069090 29.261 352 217 13 3 333 16 356 9.12e-39 142
MS.gene073562.t1 MTR_3g088565 31.229 301 186 9 44 334 2 291 1.40e-38 140
MS.gene073562.t1 MTR_7g062560 29.526 359 222 13 5 353 19 356 2.22e-38 140
MS.gene073562.t1 MTR_4g116010 32.222 270 162 8 64 322 64 323 2.71e-38 140
MS.gene073562.t1 MTR_6g464620 28.446 341 225 7 5 332 24 358 3.36e-38 140
MS.gene073562.t1 MTR_5g011250 26.625 323 218 9 20 326 15 334 3.66e-38 140
MS.gene073562.t1 MTR_8g041600 30.514 331 199 11 18 330 38 355 4.50e-38 140
MS.gene073562.t1 MTR_1g081840 29.412 323 208 6 23 332 32 347 4.82e-38 140
MS.gene073562.t1 MTR_4g087120 30.031 323 203 7 28 330 8 327 6.04e-38 139
MS.gene073562.t1 MTR_2g069300 29.373 303 196 9 45 338 54 347 7.04e-38 139
MS.gene073562.t1 MTR_7g045650 32.051 312 191 10 1 300 10 312 9.50e-38 138
MS.gene073562.t1 MTR_4g087110 29.721 323 204 7 28 330 8 327 1.10e-37 138
MS.gene073562.t1 MTR_2g068950 29.293 297 197 4 44 332 62 353 1.18e-37 139
MS.gene073562.t1 MTR_2g069190 28.415 366 232 13 3 349 16 370 5.30e-37 137
MS.gene073562.t1 MTR_8g033380 28.037 321 219 5 21 332 30 347 5.63e-37 137
MS.gene073562.t1 MTR_3g045230 27.564 312 217 4 39 349 50 353 5.86e-37 136
MS.gene073562.t1 MTR_1g043810 31.454 337 209 12 18 343 25 350 7.49e-37 136
MS.gene073562.t1 MTR_3g088745 30.606 330 197 12 22 332 14 330 9.76e-37 136
MS.gene073562.t1 MTR_3g096500 27.893 337 225 9 23 345 44 376 1.01e-36 136
MS.gene073562.t1 MTR_8g006930 28.779 344 224 9 18 349 38 372 1.06e-36 136
MS.gene073562.t1 MTR_3g026150 31.034 261 160 9 98 349 7 256 1.72e-36 133
MS.gene073562.t1 MTR_8g008930 30.887 327 187 15 30 333 39 349 2.11e-36 135
MS.gene073562.t1 MTR_1g102070 28.955 335 215 11 13 332 27 353 2.14e-36 135
MS.gene073562.t1 MTR_2g068960 29.530 298 195 6 44 332 62 353 2.58e-36 135
MS.gene073562.t1 MTR_8g074070 31.690 284 163 9 45 322 52 310 3.43e-36 134
MS.gene073562.t1 MTR_3g117485 29.010 293 181 8 45 322 49 329 6.09e-36 134
MS.gene073562.t1 MTR_4g119410 30.068 296 191 7 44 330 66 354 1.01e-35 134
MS.gene073562.t1 MTR_4g024660 27.077 325 217 9 18 330 38 354 1.04e-35 134
MS.gene073562.t1 MTR_3g043900 26.901 342 228 7 18 349 23 352 1.11e-35 133
MS.gene073562.t1 MTR_8g093930 26.498 317 226 4 22 332 24 339 3.54e-35 132
MS.gene073562.t1 MTR_2g437380 36.139 202 123 3 151 349 63 261 3.77e-35 129
MS.gene073562.t1 MTR_1g043775 31.935 310 191 11 43 343 52 350 4.05e-35 132
MS.gene073562.t1 MTR_4g117880 29.831 295 188 9 45 329 60 345 6.15e-35 131
MS.gene073562.t1 MTR_7g105070 27.299 348 228 10 18 352 29 364 1.05e-34 130
MS.gene073562.t1 MTR_0032s0040 28.869 336 206 9 18 332 33 356 1.08e-34 131
MS.gene073562.t1 MTR_0009s0050 36.571 175 106 3 182 354 1 172 1.26e-34 125
MS.gene073562.t1 MTR_1g032140 28.035 346 219 11 18 349 35 364 1.65e-34 130
MS.gene073562.t1 MTR_7g078010 29.605 304 192 7 44 335 66 359 2.77e-34 130
MS.gene073562.t1 MTR_7g056347 26.801 347 227 12 18 349 38 372 3.07e-34 129
MS.gene073562.t1 MTR_1g043770 27.419 372 223 13 1 344 1 353 1.23e-33 127
MS.gene073562.t1 MTR_1g070110 32.653 245 129 7 89 330 4 215 1.27e-33 124
MS.gene073562.t1 MTR_4g087100 27.864 323 210 8 28 330 8 327 2.96e-33 126
MS.gene073562.t1 MTR_2g025120 28.767 292 187 9 47 330 6 284 2.97e-33 125
MS.gene073562.t1 MTR_8g469400 30.996 271 171 8 69 330 78 341 5.27e-33 126
MS.gene073562.t1 MTR_1g027290 31.457 302 181 11 53 339 38 328 6.27e-33 125
MS.gene073562.t1 MTR_2g069060 28.669 293 194 6 43 329 47 330 1.04e-32 125
MS.gene073562.t1 MTR_3g083370 27.575 301 201 8 60 354 17 306 2.07e-32 123
MS.gene073562.t1 MTR_8g009120 29.966 297 183 10 45 334 60 338 2.12e-32 124
MS.gene073562.t1 MTR_8g041600 31.321 265 159 9 18 270 38 291 2.51e-31 120
MS.gene073562.t1 MTR_3g026150 31.356 236 141 10 44 270 59 282 2.83e-31 119
MS.gene073562.t1 MTR_4g087130 29.141 326 213 6 21 329 1 325 2.86e-31 121
MS.gene073562.t1 MTR_5g048850 30.502 259 171 6 18 272 18 271 3.35e-31 119
MS.gene073562.t1 MTR_1g070185 26.946 334 227 8 18 344 39 362 3.58e-31 121
MS.gene073562.t1 MTR_3g117485 28.846 260 159 7 77 322 10 257 5.12e-31 119
MS.gene073562.t1 MTR_8g009150 27.365 296 184 7 45 334 60 330 1.02e-30 119
MS.gene073562.t1 MTR_2g072910 33.210 271 155 10 16 273 21 278 3.31e-30 117
MS.gene073562.t1 MTR_7g102720 28.621 290 201 6 62 349 49 334 3.98e-30 117
MS.gene073562.t1 MTR_2g083000 29.739 306 196 9 45 347 33 322 4.30e-30 117
MS.gene073562.t1 MTR_5g055690 32.627 236 144 6 43 270 42 270 5.94e-30 116
MS.gene073562.t1 MTR_1g032220 26.254 339 234 8 18 349 42 371 7.50e-30 117
MS.gene073562.t1 MTR_0009s0400 40.940 149 83 3 206 352 1 146 1.11e-29 111
MS.gene073562.t1 MTR_8g063070 27.609 297 197 8 44 330 66 354 1.21e-29 117
MS.gene073562.t1 MTR_1g027310 28.213 319 175 10 34 347 38 307 1.83e-29 115
MS.gene073562.t1 MTR_1g032250 27.726 321 215 9 18 330 42 353 1.94e-29 116
MS.gene073562.t1 MTR_7g056393 28.523 298 197 6 44 332 66 356 2.03e-29 116
MS.gene073562.t1 MTR_0009s0480 29.818 275 160 6 12 270 11 268 2.35e-29 114
MS.gene073562.t1 MTR_2g068800 28.571 280 170 6 18 290 27 283 2.55e-29 114
MS.gene073562.t1 MTR_5g085330 26.837 313 204 7 54 354 12 311 6.29e-29 114
MS.gene073562.t1 MTR_8g093980 24.931 361 242 10 2 345 18 366 8.84e-28 112
MS.gene073562.t1 MTR_2g083030 27.759 299 198 9 45 340 37 320 1.61e-27 110
MS.gene073562.t1 MTR_4g115990 30.081 246 149 6 81 322 76 302 1.93e-27 110
MS.gene073562.t1 MTR_8g009080 30.317 221 146 4 48 266 97 311 2.43e-27 110
MS.gene073562.t1 MTR_8g009080 30.317 221 146 4 48 266 97 311 2.62e-27 110
MS.gene073562.t1 MTR_7g451860 30.137 292 181 10 45 329 41 316 3.46e-26 107
MS.gene073562.t1 MTR_7g047670 30.137 292 181 10 45 329 41 316 3.46e-26 107
MS.gene073562.t1 MTR_1g011580 27.174 276 194 5 63 336 73 343 3.71e-26 107
MS.gene073562.t1 MTR_8g009170 30.088 226 148 8 45 266 60 279 2.80e-25 103
MS.gene073562.t1 MTR_1g043810 30.000 260 164 10 18 269 25 274 3.01e-25 104
MS.gene073562.t1 MTR_7g056353 29.231 260 165 7 82 331 79 329 3.31e-25 106
MS.gene073562.t1 MTR_5g005570 28.374 289 187 6 45 329 37 309 6.36e-25 103
MS.gene073562.t1 MTR_4g123020 27.070 314 208 9 49 351 18 321 7.61e-25 103
MS.gene073562.t1 MTR_3g040410 25.407 307 210 9 54 353 17 311 1.01e-24 102
MS.gene073562.t1 MTR_8g009180 35.000 180 109 6 156 330 99 275 1.66e-24 101
MS.gene073562.t1 MTR_2g019370 28.159 277 180 7 67 329 42 313 1.11e-23 100
MS.gene073562.t1 MTR_6g088665 27.389 314 190 8 45 330 18 321 1.35e-23 100
MS.gene073562.t1 MTR_6g088665 27.302 315 190 8 45 330 18 322 2.16e-23 99.8
MS.gene073562.t1 MTR_1g043775 29.615 260 165 11 18 269 25 274 2.54e-23 99.0
MS.gene073562.t1 MTR_7g078010 28.879 232 151 5 44 270 66 288 5.64e-23 97.8
MS.gene073562.t1 MTR_2g069060 27.273 231 158 4 43 270 25 248 1.11e-22 95.9
MS.gene073562.t1 MTR_4g100600 27.036 307 192 11 44 331 8 301 2.13e-22 96.7
MS.gene073562.t1 MTR_1g043770 26.882 279 181 11 1 266 1 269 4.57e-22 95.1
MS.gene073562.t1 MTR_4g074130 28.276 290 188 9 45 329 40 314 4.75e-22 95.9
MS.gene073562.t1 MTR_8g461330 27.338 278 182 7 67 329 41 313 6.55e-22 95.5
MS.gene073562.t1 MTR_4g132770 36.842 133 78 3 206 334 29 159 2.69e-21 89.7
MS.gene073562.t1 MTR_2g025120 26.923 234 151 8 44 270 3 223 5.79e-21 90.5
MS.gene073562.t1 MTR_2g033270 28.065 310 190 12 57 350 25 317 1.20e-20 91.7
MS.gene073562.t1 MTR_6g092620 27.481 262 174 9 44 299 2 253 3.13e-20 90.1
MS.gene073562.t1 MTR_2g070870 26.277 274 182 8 67 332 42 303 2.11e-19 88.2
MS.gene073562.t1 MTR_3g464530 26.744 258 167 7 65 310 45 292 3.73e-19 87.4
MS.gene073562.t1 MTR_4g096840 26.354 277 184 9 67 329 43 313 1.42e-18 85.9
MS.gene073562.t1 MTR_5g025090 23.592 284 202 6 65 344 20 292 2.12e-18 84.7
MS.gene073562.t1 MTR_4g100590 25.249 301 187 10 43 321 2 286 2.72e-18 84.7
MS.gene073562.t1 MTR_3g083370 25.806 217 145 6 60 270 17 223 3.24e-18 82.8
MS.gene073562.t1 MTR_1g086550 24.516 310 205 9 39 329 14 313 5.23e-18 84.3
MS.gene073562.t1 MTR_5g025050 24.638 276 179 6 65 329 20 277 1.88e-17 82.0
MS.gene073562.t1 MTR_5g027230 24.549 277 178 7 65 329 21 278 4.76e-16 78.2
MS.gene073562.t1 MTR_8g030880 25.000 308 203 10 42 336 7 299 9.92e-16 77.4
MS.gene073562.t1 MTR_4g021360 22.680 291 215 8 57 341 21 307 1.01e-15 77.4
MS.gene073562.t1 MTR_4g011690 28.723 188 128 6 151 335 115 299 5.57e-15 75.1
MS.gene073562.t1 MTR_7g077670 25.641 273 185 8 75 337 36 300 8.65e-15 74.7
MS.gene073562.t1 MTR_7g090520 21.981 323 224 9 45 353 10 318 1.27e-14 74.3
MS.gene073562.t1 MTR_4g011720 25.088 283 183 9 63 332 29 295 4.11e-14 72.8
MS.gene073562.t1 MTR_4g100600 27.350 234 139 10 44 258 8 229 7.83e-14 70.5
MS.gene073562.t1 MTR_4g021380 22.449 294 206 12 51 332 18 301 3.07e-13 70.1
MS.gene073562.t1 MTR_6g035160 32.787 122 79 3 216 335 45 165 4.32e-13 67.4
MS.gene073562.t1 MTR_1g043840 26.667 195 125 5 151 330 33 224 1.10e-12 68.6
MS.gene073562.t1 MTR_7g056370 27.429 175 120 3 18 189 17 187 4.48e-12 65.1
MS.gene073562.t1 MTR_4g094900 23.474 213 142 6 42 235 5 215 1.09e-11 64.7
MS.gene073562.t1 MTR_3g464530 24.771 218 142 7 65 270 45 252 1.63e-11 64.3
MS.gene073562.t1 MTR_2g068850 31.343 134 88 4 23 154 32 163 6.78e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene073562.t1 AT5G07480 56.780 354 147 3 1 349 1 353 2.55e-154 438
MS.gene073562.t1 AT5G07480 62.705 244 86 2 111 349 1 244 1.13e-116 338
MS.gene073562.t1 AT3G60290 48.083 339 169 4 18 352 21 356 1.16e-112 332
MS.gene073562.t1 AT2G44800 45.739 352 181 5 5 352 11 356 4.62e-110 325
MS.gene073562.t1 AT2G36690 41.593 339 183 7 18 346 26 359 3.80e-87 267
MS.gene073562.t1 AT2G36690 41.593 339 183 7 18 346 26 359 3.80e-87 267
MS.gene073562.t1 AT5G24530 35.329 334 202 5 24 350 15 341 6.43e-67 214
MS.gene073562.t1 AT4G10500 36.624 314 190 5 23 331 19 328 3.16e-66 213
MS.gene073562.t1 AT4G10490 33.754 317 200 5 21 331 15 327 1.29e-61 201
MS.gene073562.t1 AT1G17020 31.195 343 221 9 16 349 21 357 1.42e-52 178
MS.gene073562.t1 AT3G21420 35.082 305 161 8 64 349 75 361 3.56e-49 169
MS.gene073562.t1 AT4G25300 29.213 356 210 10 16 349 20 355 9.92e-48 165
MS.gene073562.t1 AT1G78550 30.814 344 229 5 11 349 16 355 1.31e-47 165
MS.gene073562.t1 AT3G55970 31.519 349 217 11 18 350 19 361 1.61e-47 165
MS.gene073562.t1 AT5G08640 31.454 337 209 8 1 329 3 325 1.90e-47 164
MS.gene073562.t1 AT5G08640 31.454 337 209 8 1 329 3 325 1.90e-47 164
MS.gene073562.t1 AT1G17010 30.868 311 206 7 43 349 52 357 1.09e-46 162
MS.gene073562.t1 AT2G38240 30.372 349 221 10 12 348 11 349 8.81e-46 160
MS.gene073562.t1 AT4G16330 33.333 348 199 14 16 348 33 362 4.01e-45 158
MS.gene073562.t1 AT1G15550 32.746 284 169 6 66 336 70 344 2.80e-44 156
MS.gene073562.t1 AT5G05600 31.965 341 213 11 18 346 32 365 4.52e-44 156
MS.gene073562.t1 AT3G19000 29.358 327 206 6 26 330 6 329 1.64e-43 154
MS.gene073562.t1 AT3G19010 30.667 300 189 6 45 329 28 323 1.75e-43 154
MS.gene073562.t1 AT3G19010 30.667 300 189 6 45 329 28 323 1.75e-43 154
MS.gene073562.t1 AT4G25310 31.507 292 185 9 64 349 70 352 9.57e-43 152
MS.gene073562.t1 AT5G54000 30.476 315 198 8 25 332 36 336 1.46e-42 151
MS.gene073562.t1 AT3G11180 30.409 342 217 9 18 346 61 394 1.53e-42 152
MS.gene073562.t1 AT3G11180 30.514 331 210 8 18 335 61 384 5.06e-42 151
MS.gene073562.t1 AT1G06620 30.864 324 208 7 18 332 32 348 5.86e-42 150
MS.gene073562.t1 AT3G61400 32.872 289 184 6 57 339 77 361 2.48e-41 149
MS.gene073562.t1 AT1G78550 32.609 276 181 3 76 349 5 277 3.21e-41 146
MS.gene073562.t1 AT3G51240 30.357 280 190 4 22 297 13 291 7.55e-41 147
MS.gene073562.t1 AT1G60980 29.070 344 222 8 23 350 35 372 8.94e-41 147
MS.gene073562.t1 AT1G49390 29.043 303 196 7 25 322 35 323 9.74e-41 146
MS.gene073562.t1 AT5G51810 28.857 350 217 12 22 352 40 376 1.99e-40 146
MS.gene073562.t1 AT4G22880 28.571 336 220 9 13 331 7 339 2.75e-40 145
MS.gene073562.t1 AT4G22880 28.571 336 220 9 13 331 7 339 2.75e-40 145
MS.gene073562.t1 AT4G22880 28.571 336 220 9 13 331 7 339 2.75e-40 145
MS.gene073562.t1 AT2G30840 32.024 331 192 11 18 329 26 342 3.47e-40 145
MS.gene073562.t1 AT4G25420 27.697 343 225 7 22 348 38 373 4.68e-40 145
MS.gene073562.t1 AT5G20400 29.043 303 196 7 25 322 35 323 4.77e-40 144
MS.gene073562.t1 AT5G54000 33.077 260 163 7 80 332 1 256 2.07e-39 141
MS.gene073562.t1 AT1G03410 30.746 335 208 8 20 339 27 352 2.34e-39 143
MS.gene073562.t1 AT1G03410 30.746 335 208 8 20 339 64 389 5.95e-39 143
MS.gene073562.t1 AT3G13610 28.235 340 225 8 18 349 32 360 7.26e-39 142
MS.gene073562.t1 AT1G06640 30.068 296 185 9 63 347 83 367 3.77e-38 140
MS.gene073562.t1 AT5G63590 29.592 294 201 5 41 329 5 297 8.31e-38 137
MS.gene073562.t1 AT1G55290 29.794 339 218 9 18 347 31 358 1.25e-37 139
MS.gene073562.t1 AT5G59530 30.183 328 195 10 21 329 32 344 1.27e-37 139
MS.gene073562.t1 AT3G19010 29.667 300 162 7 45 329 28 293 1.67e-37 137
MS.gene073562.t1 AT5G43450 29.526 359 220 13 6 345 13 357 1.69e-37 138
MS.gene073562.t1 AT1G06645 27.682 289 180 7 63 338 96 368 3.62e-37 137
MS.gene073562.t1 AT1G49390 31.048 248 162 6 80 322 1 244 5.93e-37 134
MS.gene073562.t1 AT2G30840 31.722 331 187 12 18 329 26 336 7.61e-37 136
MS.gene073562.t1 AT1G80330 29.305 331 207 8 20 332 15 336 1.73e-36 135
MS.gene073562.t1 AT5G07200 28.528 326 211 8 23 332 36 355 2.05e-36 135
MS.gene073562.t1 AT1G04380 31.864 295 179 8 44 329 44 325 3.94e-36 134
MS.gene073562.t1 AT4G16330 33.716 261 153 9 97 348 7 256 6.09e-36 131
MS.gene073562.t1 AT5G20550 27.083 336 221 10 4 333 16 333 1.56e-35 132
MS.gene073562.t1 AT5G63600 27.036 307 210 7 30 331 14 311 1.62e-35 132
MS.gene073562.t1 AT1G77330 30.195 308 179 11 44 334 2 290 2.09e-35 131
MS.gene073562.t1 AT1G04350 30.556 324 197 11 21 329 30 340 2.35e-35 132
MS.gene073562.t1 AT5G43440 28.986 345 215 14 18 345 29 360 2.48e-35 132
MS.gene073562.t1 AT1G06650 26.765 340 208 12 18 333 31 353 3.15e-35 132
MS.gene073562.t1 AT3G12900 28.963 328 203 7 18 331 27 338 4.11e-35 132
MS.gene073562.t1 AT5G63600 27.273 308 209 8 30 331 14 312 8.50e-35 130
MS.gene073562.t1 AT3G19000 29.213 267 164 6 26 270 6 269 9.35e-35 129
MS.gene073562.t1 AT5G59540 28.399 331 204 7 18 329 30 346 1.11e-34 130
MS.gene073562.t1 AT2G30830 31.752 274 176 7 57 325 67 334 2.09e-34 130
MS.gene073562.t1 AT1G80340 29.286 280 190 4 63 336 60 337 3.02e-34 129
MS.gene073562.t1 AT3G19010 31.557 244 144 7 45 271 28 265 1.56e-33 126
MS.gene073562.t1 AT3G55970 31.599 269 163 10 18 270 19 282 2.20e-33 125
MS.gene073562.t1 AT4G25300 30.000 220 143 5 133 349 50 261 5.92e-33 124
MS.gene073562.t1 AT5G12270 30.952 294 192 7 63 349 69 358 3.11e-32 124
MS.gene073562.t1 AT1G44090 28.060 335 205 13 19 332 38 357 7.74e-32 123
MS.gene073562.t1 AT1G06620 31.660 259 164 6 18 270 32 283 1.45e-31 120
MS.gene073562.t1 AT1G12010 26.537 309 209 8 47 350 9 304 1.75e-31 121
MS.gene073562.t1 AT1G03400 26.816 358 233 9 1 342 1 345 5.99e-31 120
MS.gene073562.t1 AT1G05010 30.325 277 174 10 44 313 3 267 8.38e-31 119
MS.gene073562.t1 AT2G25450 27.129 317 216 8 18 325 26 336 4.25e-30 118
MS.gene073562.t1 AT3G51240 32.195 205 136 3 95 297 4 207 6.55e-30 115
MS.gene073562.t1 AT2G30840 31.698 265 151 9 18 266 26 276 1.76e-29 115
MS.gene073562.t1 AT5G63595 29.365 252 150 6 44 293 24 249 4.24e-29 114
MS.gene073562.t1 AT4G21200 28.483 323 204 10 11 329 14 313 4.53e-29 115
MS.gene073562.t1 AT5G51810 29.889 271 162 10 22 277 40 297 4.78e-29 114
MS.gene073562.t1 AT4G25420 27.481 262 170 6 22 270 38 292 1.83e-28 112
MS.gene073562.t1 AT4G21690 27.046 281 192 4 67 336 61 339 2.04e-28 113
MS.gene073562.t1 AT5G05600 31.321 265 164 10 18 270 32 290 2.52e-28 112
MS.gene073562.t1 AT1G78440 26.230 305 197 9 39 329 12 302 8.14e-28 111
MS.gene073562.t1 AT5G43935 31.136 273 162 9 63 330 32 283 9.89e-28 110
MS.gene073562.t1 AT1G62380 26.246 301 200 10 41 334 3 288 1.31e-27 110
MS.gene073562.t1 AT3G61400 32.407 216 140 4 57 270 77 288 4.17e-27 108
MS.gene073562.t1 AT1G06640 32.227 211 125 7 63 266 83 282 8.43e-26 105
MS.gene073562.t1 AT1G03400 25.130 386 232 10 1 342 1 373 8.91e-26 107
MS.gene073562.t1 AT1G06640 32.227 211 125 7 63 266 83 282 1.84e-25 104
MS.gene073562.t1 AT3G50210 24.407 295 197 9 38 307 1 294 4.69e-25 103
MS.gene073562.t1 AT3G50210 24.407 295 197 9 38 307 1 294 4.69e-25 103
MS.gene073562.t1 AT3G50210 24.407 295 197 9 38 307 1 294 4.69e-25 103
MS.gene073562.t1 AT1G04380 31.915 235 141 7 44 272 44 265 6.80e-25 102
MS.gene073562.t1 AT3G46500 29.730 296 181 12 43 321 15 300 8.15e-25 103
MS.gene073562.t1 AT4G25310 26.117 291 174 9 64 349 70 324 1.52e-24 102
MS.gene073562.t1 AT3G49620 24.354 271 189 8 63 320 60 327 1.58e-24 103
MS.gene073562.t1 AT5G43450 28.674 279 172 10 6 269 13 279 2.21e-24 101
MS.gene073562.t1 AT3G49630 25.000 280 194 8 61 327 33 309 2.42e-24 102
MS.gene073562.t1 AT3G49630 25.000 280 194 8 61 327 29 305 2.67e-24 102
MS.gene073562.t1 AT5G63580 31.276 243 145 9 36 270 12 240 4.74e-24 99.4
MS.gene073562.t1 AT1G50960 26.421 299 182 8 45 329 40 314 5.15e-24 101
MS.gene073562.t1 AT5G63580 31.120 241 144 9 36 268 12 238 1.16e-23 98.6
MS.gene073562.t1 AT3G46500 30.147 272 163 12 43 297 15 276 3.10e-23 98.6
MS.gene073562.t1 AT1G14130 26.241 282 199 3 65 344 24 298 4.28e-23 98.2
MS.gene073562.t1 AT1G06650 26.394 269 161 9 18 266 31 282 5.79e-23 97.8
MS.gene073562.t1 AT5G43440 27.985 268 169 11 18 272 29 285 8.84e-23 97.1
MS.gene073562.t1 AT1G30040 26.936 297 192 10 44 329 30 312 2.65e-22 96.7
MS.gene073562.t1 AT2G19590 24.765 319 213 10 38 349 4 302 3.50e-22 95.9
MS.gene073562.t1 AT3G46490 29.286 280 168 13 41 298 13 284 5.02e-22 95.1
MS.gene073562.t1 AT5G59540 27.138 269 166 6 18 270 30 284 6.96e-22 94.4
MS.gene073562.t1 AT3G46490 28.713 303 186 13 41 321 13 307 9.28e-22 94.7
MS.gene073562.t1 AT2G06960 35.185 162 87 7 178 337 1 146 5.41e-21 88.6
MS.gene073562.t1 AT1G02400 25.357 280 195 8 60 329 34 309 5.45e-20 89.7
MS.gene073562.t1 AT1G47990 25.329 304 189 11 45 329 15 299 6.36e-20 89.7
MS.gene073562.t1 AT2G34555 25.658 304 202 10 36 329 18 307 5.15e-18 84.3
MS.gene073562.t1 AT2G19590 25.357 280 184 9 77 349 26 287 1.05e-17 82.8
MS.gene073562.t1 AT1G35190 27.758 281 163 10 41 294 8 275 5.22e-17 81.3
MS.gene073562.t1 AT1G14120 25.564 266 183 5 65 325 23 278 6.23e-17 80.9
MS.gene073562.t1 AT1G14120 25.564 266 183 5 65 325 23 278 6.23e-17 80.9
MS.gene073562.t1 AT1G14120 25.564 266 183 5 65 325 23 278 6.23e-17 80.9
MS.gene073562.t1 AT4G23340 27.431 288 179 11 70 342 30 302 3.35e-16 79.0
MS.gene073562.t1 AT3G49630 26.966 178 124 5 153 327 62 236 9.33e-16 76.6
MS.gene073562.t1 AT3G50210 26.220 164 113 4 151 307 50 212 5.77e-14 71.2
MS.gene073562.t1 AT1G52820 22.039 304 210 9 45 335 12 301 1.77e-13 70.9
MS.gene073562.t1 AT1G52800 25.676 296 200 10 55 343 24 306 5.99e-13 69.3
MS.gene073562.t1 AT1G02400 23.166 259 181 8 24 273 3 252 9.27e-12 65.1
MS.gene073562.t1 AT4G22870 34.737 95 57 3 239 331 4 95 9.76e-12 61.6
MS.gene073562.t1 AT3G46500 29.282 181 116 7 151 321 48 226 1.08e-11 64.7
MS.gene073562.t1 AT3G46500 29.282 181 116 7 151 321 48 226 1.08e-11 64.7
MS.gene073562.t1 AT5G51310 24.803 254 166 9 64 302 19 262 1.92e-11 64.7
MS.gene073562.t1 AT1G28030 23.885 314 212 13 44 340 12 315 1.94e-11 64.7
MS.gene073562.t1 AT3G46480 29.482 251 151 9 92 330 33 269 2.04e-11 64.3
MS.gene073562.t1 AT4G23340 31.915 141 89 4 206 342 47 184 2.10e-11 63.2
MS.gene073562.t1 AT4G16770 27.234 235 138 9 45 258 22 244 8.20e-11 62.4

Find 66 sgRNAs with CRISPR-Local

Find 221 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGCTTTCCCTATATTTCTT+AGG 0.135051 1.1:+33763867 None:intergenic
AAGCATGCATAGGCCAAATT+TGG 0.216766 1.1:-33767286 MS.gene073562:CDS
ACACTACGCTAACCCCTTAA+AGG 0.219340 1.1:-33765933 MS.gene073562:CDS
ATGCTTGTGCAATATCTTAC+TGG 0.257667 1.1:+33766001 None:intergenic
TATTACTAGTTTATTCAGTT+TGG 0.264028 1.1:-33763940 MS.gene073562:CDS
CCTCAAAATCCATTATTTGT+AGG 0.289347 1.1:+33764102 None:intergenic
TTTGGGAATGGATGATAAAA+TGG 0.298275 1.1:-33763922 MS.gene073562:CDS
CATGTGAATCCAATCCTTTA+AGG 0.298720 1.1:+33765919 None:intergenic
TAGTCTTGCTGTTGTTGATA+TGG 0.312834 1.1:-33767250 MS.gene073562:CDS
TTGTGAAGGCCTACAAATAA+TGG 0.320233 1.1:-33764111 MS.gene073562:CDS
ATTACTAGTTTATTCAGTTT+GGG 0.325763 1.1:-33763939 MS.gene073562:CDS
CAGAAAATCCATCTGATTAC+AGG 0.344029 1.1:-33765892 MS.gene073562:intron
ATCAAAACCCTAAGAAATAT+AGG 0.344706 1.1:-33763875 MS.gene073562:CDS
TGCTTTCCCTATATTTCTTA+GGG 0.347171 1.1:+33763868 None:intergenic
CCATAGGGCTACCCTTAATA+AGG 0.352583 1.1:-33763979 MS.gene073562:CDS
AGTGAAGAAAGTGGGCTTAG+AGG 0.353522 1.1:-33764309 MS.gene073562:CDS
GAGTTGATAAAGTTCAGTTT+TGG 0.382685 1.1:-33765970 MS.gene073562:CDS
CGAGATTCATGTCGTCGCTT+AGG 0.388463 1.1:-33767177 MS.gene073562:CDS
CTAAATTTGCAGGGAAAAGA+TGG 0.389718 1.1:-33764348 MS.gene073562:intron
ATGTGAATCCAATCCTTTAA+GGG 0.410178 1.1:+33765920 None:intergenic
TCAAAACCCTAAGAAATATA+GGG 0.410763 1.1:-33763874 MS.gene073562:CDS
GGGAGGCCTAATGCAATATC+TGG 0.435679 1.1:+33764176 None:intergenic
CTTCCCTTCAGAAATATCAT+TGG 0.436621 1.1:+33763815 None:intergenic
TTCACAACTTTGGTATAGAA+TGG 0.437066 1.1:+33764127 None:intergenic
AAATTTGGCCTATGCATGCT+TGG 0.439870 1.1:+33767288 None:intergenic
TTTGTAGGCCTTCACAACTT+TGG 0.457168 1.1:+33764117 None:intergenic
CATTGCTTAATACCTCAAAA+TGG 0.459426 1.1:+33764021 None:intergenic
CCTTATTAAGGGTAGCCCTA+TGG 0.460384 1.1:+33763979 None:intergenic
ATCATCCACAAGCTCTTTAG+CGG 0.467042 1.1:+33763896 None:intergenic
CCACAACCAGATATTGCATT+AGG 0.478746 1.1:-33764182 MS.gene073562:CDS
TAGTTTATTCAGTTTGGGAA+TGG 0.479376 1.1:-33763934 MS.gene073562:CDS
ACGCTAACCCCTTAAAGGAT+TGG 0.483604 1.1:-33765928 MS.gene073562:CDS
AAAACAGTACCACACATTCC+TGG 0.485740 1.1:-33764068 MS.gene073562:CDS
TGTACAAGAGTGTTGTCCAT+AGG 0.490999 1.1:-33763995 MS.gene073562:CDS
AGTTGTAGTTATTGTTCTTG+AGG 0.497276 1.1:+33763778 None:intergenic
GGTGCACTTCAAGTGCATCT+AGG 0.501281 1.1:-33764047 MS.gene073562:CDS
AACTGTAGTCAGAGTGTGGT+GGG 0.503267 1.1:+33764156 None:intergenic
GTACAAGAGTGTTGTCCATA+GGG 0.508641 1.1:-33763994 MS.gene073562:CDS
ACAATTTCACAAATGGAGAA+TGG 0.517104 1.1:-33767390 None:intergenic
TAAATTTGCAGGGAAAAGAT+GGG 0.521877 1.1:-33764347 MS.gene073562:intron
GCTACCAATGATATTTCTGA+AGG 0.530870 1.1:-33763819 MS.gene073562:CDS
TATTGCACAAGCATAAAAGA+TGG 0.533424 1.1:-33765992 MS.gene073562:CDS
GATATGGCTGCTCTTAAGAA+TGG 0.543544 1.1:-33767234 MS.gene073562:CDS
CTAAAGTATAGAATGAACTT+AGG 0.551587 1.1:+33767361 None:intergenic
TTGTAATTCCAAGCATGCAT+AGG 0.551756 1.1:-33767296 MS.gene073562:CDS
ATGTAATACCTGTAATCAGA+TGG 0.562524 1.1:+33765884 None:intergenic
CCTAATGCAATATCTGGTTG+TGG 0.567055 1.1:+33764182 None:intergenic
TTAAGAATGGCTCAACATCA+AGG 0.567305 1.1:-33767221 MS.gene073562:CDS
GCAATATCTGGTTGTGGACA+AGG 0.569688 1.1:+33764188 None:intergenic
GGAGACCGCTAAAGAGCTTG+TGG 0.574227 1.1:-33763901 MS.gene073562:CDS
TTGTCAAGAAGTGAAGAAAG+TGG 0.576450 1.1:-33764318 MS.gene073562:CDS
TGTGAATCCAATCCTTTAAG+GGG 0.586511 1.1:+33765921 None:intergenic
ATTCTATACCAAAGTTGTGA+AGG 0.586627 1.1:-33764125 MS.gene073562:CDS
TGTCAAGAAGTGAAGAAAGT+GGG 0.595600 1.1:-33764317 MS.gene073562:CDS
AGTGAGTGAATCAGTGCTAG+AGG 0.600564 1.1:-33766104 MS.gene073562:CDS
AGATGCACTTGAAGTGCACC+AGG 0.600988 1.1:+33764050 None:intergenic
GCACTGATTCACTCACTCCA+TGG 0.604709 1.1:+33766110 None:intergenic
AACTTTGGTATAGAATGGTA+AGG 0.607016 1.1:+33764132 None:intergenic
CTACCAATGATATTTCTGAA+GGG 0.612562 1.1:-33763818 MS.gene073562:CDS
TAAAGGATTGGATTCACATG+TGG 0.626013 1.1:-33765916 MS.gene073562:CDS
CAACTGTAGTCAGAGTGTGG+TGG 0.666364 1.1:+33764155 None:intergenic
AGGCAACTGTAGTCAGAGTG+TGG 0.669050 1.1:+33764152 None:intergenic
TGTAGTCAGAGTGTGGTGGG+AGG 0.677354 1.1:+33764159 None:intergenic
GCTAGAGGAAGCTTTATCTG+TGG 0.690147 1.1:-33766089 MS.gene073562:CDS
TGAAGTGCACCAGGAATGTG+TGG 0.694342 1.1:+33764059 None:intergenic
ATATCTGGTTGTGGACAAGG+TGG 0.722599 1.1:+33764191 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAATAAATAAAAAAATT+CGG + chr1.1:33766452-33766471 None:intergenic 0.0%
!! AATAAAATGTTGATATATTT+AGG + chr1.1:33766284-33766303 None:intergenic 10.0%
!! ATAAAATGTTGATATATTTA+GGG + chr1.1:33766283-33766302 None:intergenic 10.0%
!! TTAAAAAATTTAAGAGTTTA+AGG + chr1.1:33765846-33765865 None:intergenic 10.0%
!!! AATTCTATTTTTTTTTCTTT+TGG - chr1.1:33766547-33766566 MS.gene073562:intron 10.0%
!!! ACCATTTTATTATATTTAAA+AGG - chr1.1:33765345-33765364 MS.gene073562:intron 10.0%
!!! ATAAGTAAATTTTTTTTTGT+AGG + chr1.1:33765785-33765804 None:intergenic 10.0%
!!! ATTCAAAAGTTTTTTTTTTT+TGG + chr1.1:33766768-33766787 None:intergenic 10.0%
!!! ATTTTTTTTAATTAATCAAG+AGG - chr1.1:33764901-33764920 MS.gene073562:intron 10.0%
!!! TAAGTAAATTTTTTTTTGTA+GGG + chr1.1:33765784-33765803 None:intergenic 10.0%
!!! TCCTTTTAAATATAATAAAA+TGG + chr1.1:33765349-33765368 None:intergenic 10.0%
!!! TTAATAAAATTTTCCAAAAA+TGG + chr1.1:33766596-33766615 None:intergenic 10.0%
!!! TTCAAAAGTTTTTTTTTTTT+GGG + chr1.1:33766767-33766786 None:intergenic 10.0%
!!! TTTTAGTTTAAATAAGTAAA+TGG - chr1.1:33766254-33766273 MS.gene073562:intron 10.0%
!! AAGCATAAATTAAACAAATT+TGG - chr1.1:33766095-33766114 MS.gene073562:CDS 15.0%
!! AATAATAGTTGAGATTTAAA+AGG + chr1.1:33764884-33764903 None:intergenic 15.0%
!! AATGCTATTAAAATTAAGTA+AGG - chr1.1:33766167-33766186 MS.gene073562:intron 15.0%
!! AATGCTATTAAAATTAAGTA+AGG + chr1.1:33766186-33766167 None:intergenic 15.0%
!! AATTTCATTGAAAAATATGA+AGG + chr1.1:33766395-33766414 None:intergenic 15.0%
!! ACTAAAATAGTATATATCTT+AGG + chr1.1:33766241-33766260 None:intergenic 15.0%
!! AGATATAAGTAACAAAAATA+TGG - chr1.1:33765977-33765996 MS.gene073562:CDS 15.0%
!! ATTTCAAAATTCAGAAAAAA+TGG + chr1.1:33764247-33764266 None:intergenic 15.0%
!! CTAAAATAGTATATATCTTA+GGG + chr1.1:33766240-33766259 None:intergenic 15.0%
!! TAAAATGTTGATATATTTAG+GGG + chr1.1:33766282-33766301 None:intergenic 15.0%
!! TCTTCAAAGAAAAAAATAAA+GGG + chr1.1:33764460-33764479 None:intergenic 15.0%
!! TTATTAGAGTAATGTAATAT+GGG + chr1.1:33765472-33765491 None:intergenic 15.0%
!! TTCAAAAAACAAAAAACAAA+GGG + chr1.1:33764494-33764513 None:intergenic 15.0%
!! TTCTTCAAAGAAAAAAATAA+AGG + chr1.1:33764461-33764480 None:intergenic 15.0%
!! TTTATTAGAGTAATGTAATA+TGG + chr1.1:33765473-33765492 None:intergenic 15.0%
!!! AAATTTTTGCGAATTTTTTT+CGG - chr1.1:33766011-33766030 MS.gene073562:CDS 15.0%
!!! GAAAAAAGTATAATAACAAA+GGG + chr1.1:33764531-33764550 None:intergenic 15.0%
!!! TCTACATTATATATCTTTTT+AGG + chr1.1:33764087-33764106 None:intergenic 15.0%
!!! TGAAAAAAGTATAATAACAA+AGG + chr1.1:33764532-33764551 None:intergenic 15.0%
!! AAAATGTTGATATATTTAGG+GGG + chr1.1:33766281-33766300 None:intergenic 20.0%
!! AACAGTTCTTGAAAAAATAT+AGG + chr1.1:33764145-33764164 None:intergenic 20.0%
!! AAGATATATAATGTAGACTT+TGG - chr1.1:33764090-33764109 MS.gene073562:CDS 20.0%
!! ACAGTTCTTGAAAAAATATA+GGG + chr1.1:33764144-33764163 None:intergenic 20.0%
!! ACATTATTTGACCAAAAAAT+GGG - chr1.1:33766632-33766651 MS.gene073562:intron 20.0%
!! AGTTAACTCTTATAAGATAT+AGG - chr1.1:33765680-33765699 MS.gene073562:intron 20.0%
!! ATCAAATGTTGGTATATTTA+AGG - chr1.1:33766722-33766741 MS.gene073562:intron 20.0%
!! CTTCAAAAAACAAAAAACAA+AGG + chr1.1:33764495-33764514 None:intergenic 20.0%
!! GTTAACTCTTATAAGATATA+GGG - chr1.1:33765681-33765700 MS.gene073562:intron 20.0%
!! TATGGATATGATATATAACA+TGG + chr1.1:33765535-33765554 None:intergenic 20.0%
!! TCAAATGTTGGTATATTTAA+GGG - chr1.1:33766723-33766742 MS.gene073562:intron 20.0%
!! TTATTAACATTTCAAAGTGT+TGG - chr1.1:33765632-33765651 MS.gene073562:intron 20.0%
!! TTTACAACAAATTTAAGAAG+TGG + chr1.1:33764369-33764388 None:intergenic 20.0%
!!! AAATTCACTTTTTCTTTTGT+CGG + chr1.1:33765111-33765130 None:intergenic 20.0%
!!! AGACAAAATTTATTTTAGCA+GGG + chr1.1:33765817-33765836 None:intergenic 20.0%
!!! ATTACTAGTTTATTCAGTTT+GGG - chr1.1:33767215-33767234 MS.gene073562:CDS 20.0%
!!! ATTTCATGAATGGAAAATTT+TGG - chr1.1:33766660-33766679 MS.gene073562:intron 20.0%
!!! ATTTCTCTCTATCTATTTTT+AGG - chr1.1:33764770-33764789 MS.gene073562:intron 20.0%
!!! CAATGAAATTTTCCAAAAAA+AGG - chr1.1:33766405-33766424 MS.gene073562:intron 20.0%
!!! CATAATATTCTACCTTTTTT+TGG + chr1.1:33766420-33766439 None:intergenic 20.0%
!!! CATAATTTTCTATCCATTTT+TGG - chr1.1:33766580-33766599 MS.gene073562:intron 20.0%
!!! GTTTTTCAACAATTTTTTAC+AGG + chr1.1:33766065-33766084 None:intergenic 20.0%
!!! TAGACAAAATTTATTTTAGC+AGG + chr1.1:33765818-33765837 None:intergenic 20.0%
!!! TATAGGGTTAATTATGTTTT+TGG - chr1.1:33765697-33765716 MS.gene073562:intron 20.0%
!!! TATATATATCGATTCTCATT+TGG - chr1.1:33764992-33765011 MS.gene073562:intron 20.0%
!!! TATTACTAGTTTATTCAGTT+TGG - chr1.1:33767214-33767233 MS.gene073562:CDS 20.0%
!!! TTGGAATTACAAAATTTTGA+GGG + chr1.1:33763850-33763869 None:intergenic 20.0%
!!! TTTTGGGTTAAATAAGTAAA+TGG + chr1.1:33766751-33766770 None:intergenic 20.0%
! AAAAAACAAAAAACAAAGGG+TGG + chr1.1:33764491-33764510 None:intergenic 25.0%
! AAAATCCTTCTAAATTTGCA+GGG - chr1.1:33766797-33766816 MS.gene073562:intron 25.0%
! AAACAAATTTGGATTGAGTA+AGG - chr1.1:33766106-33766125 MS.gene073562:CDS 25.0%
! AAAGCATAGGAAATATTTAG+AGG + chr1.1:33766313-33766332 None:intergenic 25.0%
! AAGCATAGGAAATATTTAGA+GGG + chr1.1:33766312-33766331 None:intergenic 25.0%
! ATCAAAACCCTAAGAAATAT+AGG - chr1.1:33767279-33767298 MS.gene073562:CDS 25.0%
! CAAATGTTGGTATATTTAAG+GGG - chr1.1:33766724-33766743 MS.gene073562:intron 25.0%
! CATTATTTGACCAAAAAATG+GGG - chr1.1:33766633-33766652 MS.gene073562:intron 25.0%
! CTAAAGTATAGAATGAACTT+AGG + chr1.1:33763796-33763815 None:intergenic 25.0%
! CTAACAAAAAACCTTGAAAA+TGG - chr1.1:33766912-33766931 MS.gene073562:intron 25.0%
! GACATTATTTGACCAAAAAA+TGG - chr1.1:33766631-33766650 MS.gene073562:intron 25.0%
! TATAATAGCAATGTAGTCTT+TGG - chr1.1:33764059-33764078 MS.gene073562:CDS 25.0%
! TCAAAACCCTAAGAAATATA+GGG - chr1.1:33767280-33767299 MS.gene073562:CDS 25.0%
! TCAAAGAAAAAAATAAAGGG+TGG + chr1.1:33764457-33764476 None:intergenic 25.0%
! TGTCGGTAAATCAAAAAATT+TGG + chr1.1:33765094-33765113 None:intergenic 25.0%
!! CTAAATATTTCCTATGCTTT+TGG - chr1.1:33766313-33766332 MS.gene073562:intron 25.0%
!! CTTAGGGTTAATTATGTTTT+TGG + chr1.1:33766224-33766243 None:intergenic 25.0%
!! CTTGGAATTACAAAATTTTG+AGG + chr1.1:33763851-33763870 None:intergenic 25.0%
!! GTATGAATTGATTTCATAGA+TGG + chr1.1:33766354-33766373 None:intergenic 25.0%
!! TAGACTTTGGTAATTGATTT+GGG - chr1.1:33764103-33764122 MS.gene073562:CDS 25.0%
!! TAGAGATTTTCTTGATTTTC+TGG - chr1.1:33767313-33767332 MS.gene073562:CDS 25.0%
!!! AAATTCTCTTTTTCATGTCT+TGG - chr1.1:33764307-33764326 MS.gene073562:CDS 25.0%
!!! AGGTTTTTTGTTAGATTTGA+TGG + chr1.1:33766906-33766925 None:intergenic 25.0%
!!! GCATATTTTGATTCCAAATT+TGG + chr1.1:33763884-33763903 None:intergenic 25.0%
!!! TCTTGTTTTGTCCTTATTAA+GGG + chr1.1:33767189-33767208 None:intergenic 25.0%
!!! TTCTTGTTTTGTCCTTATTA+AGG + chr1.1:33767190-33767209 None:intergenic 25.0%
AAACCGACTATACAAAAGTT+TGG + chr1.1:33764837-33764856 None:intergenic 30.0%
AAAGGAAAGTTTGTATTACC+AGG + chr1.1:33764573-33764592 None:intergenic 30.0%
AACTTTGGTATAGAATGGTA+AGG + chr1.1:33767025-33767044 None:intergenic 30.0%
AAGTAAGGACTAAACTTACA+AGG + chr1.1:33765740-33765759 None:intergenic 30.0%
ACAATACACCACCAAAAAAA+GGG + chr1.1:33764728-33764747 None:intergenic 30.0%
AGAAGTTTAGAGGATTGAAA+AGG + chr1.1:33764169-33764188 None:intergenic 30.0%
AGTTGTAGTTATTGTTCTTG+AGG + chr1.1:33767379-33767398 None:intergenic 30.0%
ATGTAATACCTGTAATCAGA+TGG + chr1.1:33765273-33765292 None:intergenic 30.0%
ATGTGAATCCAATCCTTTAA+GGG + chr1.1:33765237-33765256 None:intergenic 30.0%
ATTCTATACCAAAGTTGTGA+AGG - chr1.1:33767029-33767048 MS.gene073562:intron 30.0%
CAAAATCCTTCTAAATTTGC+AGG - chr1.1:33766796-33766815 MS.gene073562:intron 30.0%
CAGGTATTACATTCACTAAA+AGG - chr1.1:33765281-33765300 MS.gene073562:intron 30.0%
CATTGCTTAATACCTCAAAA+TGG + chr1.1:33767136-33767155 None:intergenic 30.0%
CCTCAAAATCCATTATTTGT+AGG + chr1.1:33767055-33767074 None:intergenic 30.0%
GATTCTCATTTGGTTGAATT+TGG - chr1.1:33765002-33765021 MS.gene073562:intron 30.0%
GTGTTAAGAACGTTGTTAAA+AGG + chr1.1:33766041-33766060 None:intergenic 30.0%
TAAATTTGCAGGGAAAAGAT+GGG - chr1.1:33766807-33766826 MS.gene073562:intron 30.0%
TAAGTAAGGACAAACTTACA+AGG - chr1.1:33766181-33766200 MS.gene073562:intron 30.0%
TAGTTTATTCAGTTTGGGAA+TGG - chr1.1:33767220-33767239 MS.gene073562:CDS 30.0%
TATGTATTCCAGTTGAACAA+TGG - chr1.1:33765427-33765446 MS.gene073562:intron 30.0%
TATTGCACAAGCATAAAAGA+TGG - chr1.1:33765162-33765181 MS.gene073562:intron 30.0%
TGCTTTCCCTATATTTCTTA+GGG + chr1.1:33767289-33767308 None:intergenic 30.0%
TTCACAACTTTGGTATAGAA+TGG + chr1.1:33767030-33767049 None:intergenic 30.0%
TTTGGGAATGGATGATAAAA+TGG - chr1.1:33767232-33767251 MS.gene073562:CDS 30.0%
! ATGCCAAACTTTTGTATAGT+CGG - chr1.1:33764831-33764850 MS.gene073562:intron 30.0%
! CAAAAGCCTAAGGAAAATTT+TGG - chr1.1:33766689-33766708 MS.gene073562:intron 30.0%
! CAAAATTTTCCTTAGGCTTT+TGG + chr1.1:33766691-33766710 None:intergenic 30.0%
! CAAGTTTAGAACACTATGAA+AGG - chr1.1:33765880-33765899 MS.gene073562:intron 30.0%
! CTACCAATGATATTTCTGAA+GGG - chr1.1:33767336-33767355 MS.gene073562:CDS 30.0%
! GTAGACTTTGGTAATTGATT+TGG - chr1.1:33764102-33764121 MS.gene073562:CDS 30.0%
! GTTGAATTTGGAAACTTTTC+AGG - chr1.1:33765014-33765033 MS.gene073562:intron 30.0%
!! TCATAGATGGAAAGTTTTAG+AGG + chr1.1:33766341-33766360 None:intergenic 30.0%
!! TTGATAAAGTTCAGTTTTGG+AGG - chr1.1:33765187-33765206 MS.gene073562:intron 30.0%
!!! CATAGATGGAAAGTTTTAGA+GGG + chr1.1:33766340-33766359 None:intergenic 30.0%
!!! CATTTTGAGGTATTAAGCAA+TGG - chr1.1:33767134-33767153 MS.gene073562:intron 30.0%
!!! CCTACAAATAATGGATTTTG+AGG - chr1.1:33767052-33767071 MS.gene073562:intron 30.0%
!!! GAGTGCAGAAATTTTTTGTA+GGG - chr1.1:33766138-33766157 MS.gene073562:intron 30.0%
!!! GAGTTGATAAAGTTCAGTTT+TGG - chr1.1:33765184-33765203 MS.gene073562:intron 30.0%
!!! TGAGTGCAGAAATTTTTTGT+AGG - chr1.1:33766137-33766156 MS.gene073562:intron 30.0%
!!! TGATAAAGTTCAGTTTTGGA+GGG - chr1.1:33765188-33765207 MS.gene073562:intron 30.0%
!!! TTTTTGCGAATTTTTTTCGG+AGG - chr1.1:33766014-33766033 MS.gene073562:CDS 30.0%
ACTAACTCGTGACATACATA+TGG + chr1.1:33765559-33765578 None:intergenic 35.0%
AGTTTGTATTACCAGGAAGT+AGG + chr1.1:33764566-33764585 None:intergenic 35.0%
ATGCTTGTGCAATATCTTAC+TGG + chr1.1:33765156-33765175 None:intergenic 35.0%
CAGAAAATCCATCTGATTAC+AGG - chr1.1:33765262-33765281 MS.gene073562:intron 35.0%
CATGTGAATCCAATCCTTTA+AGG + chr1.1:33765238-33765257 None:intergenic 35.0%
CTAAATTTGCAGGGAAAAGA+TGG - chr1.1:33766806-33766825 MS.gene073562:intron 35.0%
CTGCTTTCCCTATATTTCTT+AGG + chr1.1:33767290-33767309 None:intergenic 35.0%
CTTCCCTTCAGAAATATCAT+TGG + chr1.1:33767342-33767361 None:intergenic 35.0%
GACAATACACCACCAAAAAA+AGG + chr1.1:33764729-33764748 None:intergenic 35.0%
GAGGGACTAAAATCAAATGT+TGG - chr1.1:33766711-33766730 MS.gene073562:intron 35.0%
GTGCGAGAAACTTTGAATAT+GGG - chr1.1:33764279-33764298 MS.gene073562:CDS 35.0%
GTTTGTATTACCAGGAAGTA+GGG + chr1.1:33764565-33764584 None:intergenic 35.0%
TAAAGGATTGGATTCACATG+TGG - chr1.1:33765238-33765257 MS.gene073562:intron 35.0%
TCGTGACATACATATGGTTA+TGG + chr1.1:33765553-33765572 None:intergenic 35.0%
TGTCAAGAAGTGAAGAAAGT+GGG - chr1.1:33766837-33766856 MS.gene073562:intron 35.0%
TGTGAATCCAATCCTTTAAG+GGG + chr1.1:33765236-33765255 None:intergenic 35.0%
TGTGCGAGAAACTTTGAATA+TGG - chr1.1:33764278-33764297 MS.gene073562:CDS 35.0%
TTAAGAATGGCTCAACATCA+AGG - chr1.1:33763933-33763952 MS.gene073562:CDS 35.0%
TTGTAATTCCAAGCATGCAT+AGG - chr1.1:33763858-33763877 MS.gene073562:CDS 35.0%
TTGTCAAGAAGTGAAGAAAG+TGG - chr1.1:33766836-33766855 MS.gene073562:intron 35.0%
TTGTGAAGGCCTACAAATAA+TGG - chr1.1:33767043-33767062 MS.gene073562:intron 35.0%
TTTGTATTACCAGGAAGTAG+GGG + chr1.1:33764564-33764583 None:intergenic 35.0%
! AACTTTCCTTTTCATTCCGT+CGG - chr1.1:33764582-33764601 MS.gene073562:intron 35.0%
! AAGCCTAAGGAAAATTTTGG+AGG - chr1.1:33766692-33766711 MS.gene073562:intron 35.0%
! AGCCTAAGGAAAATTTTGGA+GGG - chr1.1:33766693-33766712 MS.gene073562:intron 35.0%
! CTTTTCCCTGCAAATTTAGA+AGG + chr1.1:33766805-33766824 None:intergenic 35.0%
! GCTACCAATGATATTTCTGA+AGG - chr1.1:33767335-33767354 MS.gene073562:CDS 35.0%
! GTTTCTCGCACATTCTATTT+TGG + chr1.1:33764270-33764289 None:intergenic 35.0%
! TACAAGGTCGCAATTTTGTA+GGG - chr1.1:33766197-33766216 MS.gene073562:intron 35.0%
! TACAAGGTCGCAATTTTGTA+GGG + chr1.1:33766216-33766197 None:intergenic 35.0%
! TCACTTGCATTCCATTTTCA+AGG + chr1.1:33766926-33766945 None:intergenic 35.0%
! TTACAAGGTCGCAATTTTGT+AGG - chr1.1:33766196-33766215 MS.gene073562:intron 35.0%
! TTACAAGGTCGCAATTTTGT+AGG + chr1.1:33766215-33766196 None:intergenic 35.0%
!! CTGTAATCAGATGGATTTTC+TGG + chr1.1:33765264-33765283 None:intergenic 35.0%
!! TAGTCTTGCTGTTGTTGATA+TGG - chr1.1:33763904-33763923 MS.gene073562:CDS 35.0%
!! TGGATTTTGAGGACAAAACT+TGG - chr1.1:33767063-33767082 MS.gene073562:intron 35.0%
!!! TATGTCACGAGTTAGTTTTG+TGG - chr1.1:33765563-33765582 MS.gene073562:intron 35.0%
!!! TGAAATTGCTCCCCATTTTT+TGG + chr1.1:33766646-33766665 None:intergenic 35.0%
!!! TGTCTTGTCTTCCCTTTTTT+TGG - chr1.1:33764714-33764733 MS.gene073562:intron 35.0%
AAAACAGTACCACACATTCC+TGG - chr1.1:33767086-33767105 MS.gene073562:intron 40.0%
AAATTTGGCCTATGCATGCT+TGG + chr1.1:33763869-33763888 None:intergenic 40.0%
AAGCATGCATAGGCCAAATT+TGG - chr1.1:33763868-33763887 MS.gene073562:CDS 40.0%
AGACACATGCATGTAAGAGT+AGG + chr1.1:33765311-33765330 None:intergenic 40.0%
ATCATCCACAAGCTCTTTAG+CGG + chr1.1:33767261-33767280 None:intergenic 40.0%
ATGGAATTGCAGTGATGTCA+CGG + chr1.1:33765516-33765535 None:intergenic 40.0%
ATGGGGAGCAATTTCATGAA+TGG - chr1.1:33766650-33766669 MS.gene073562:intron 40.0%
CCACAACCAGATATTGCATT+AGG - chr1.1:33766972-33766991 MS.gene073562:intron 40.0%
CCTAATGCAATATCTGGTTG+TGG + chr1.1:33766975-33766994 None:intergenic 40.0%
GATATGGCTGCTCTTAAGAA+TGG - chr1.1:33763920-33763939 MS.gene073562:CDS 40.0%
GTAGAGTTCCATTGTTCAAC+TGG + chr1.1:33765438-33765457 None:intergenic 40.0%
TGCACACAAAATCAGGACAA+AGG + chr1.1:33764812-33764831 None:intergenic 40.0%
TTGTATTACCAGGAAGTAGG+GGG + chr1.1:33764563-33764582 None:intergenic 40.0%
TTTGGCATGCACACAAAATC+AGG + chr1.1:33764819-33764838 None:intergenic 40.0%
TTTGTAGGCCTTCACAACTT+TGG + chr1.1:33767040-33767059 None:intergenic 40.0%
! GTCCCTCCAAAATTTTCCTT+AGG + chr1.1:33766698-33766717 None:intergenic 40.0%
! TTTAGAGGGACCAAAAGCAT+AGG + chr1.1:33766326-33766345 None:intergenic 40.0%
!! GTACAAGAGTGTTGTCCATA+GGG - chr1.1:33767160-33767179 MS.gene073562:intron 40.0%
!! TGTACAAGAGTGTTGTCCAT+AGG - chr1.1:33767159-33767178 MS.gene073562:intron 40.0%
!! TTGATTTGGGCTTGTACATG+AGG - chr1.1:33764116-33764135 MS.gene073562:CDS 40.0%
!!! ACTTTTCAGGTTGTGAACCA+TGG - chr1.1:33765027-33765046 MS.gene073562:intron 40.0%
!!! CTTGTCTTCCCTTTTTTTGG+TGG - chr1.1:33764717-33764736 MS.gene073562:intron 40.0%
AACTGTAGTCAGAGTGTGGT+GGG + chr1.1:33767001-33767020 None:intergenic 45.0%
AAGATGCGCGAGAAGTTTAG+AGG + chr1.1:33764179-33764198 None:intergenic 45.0%
ACACTACGCTAACCCCTTAA+AGG - chr1.1:33765221-33765240 MS.gene073562:intron 45.0%
ACGCTAACCCCTTAAAGGAT+TGG - chr1.1:33765226-33765245 MS.gene073562:intron 45.0%
AGTGAGTGAATCAGTGCTAG+AGG - chr1.1:33765050-33765069 MS.gene073562:intron 45.0%
ATATCTGGTTGTGGACAAGG+TGG + chr1.1:33766966-33766985 None:intergenic 45.0%
CCATAGGGCTACCCTTAATA+AGG - chr1.1:33767175-33767194 MS.gene073562:CDS 45.0%
CCTTATTAAGGGTAGCCCTA+TGG + chr1.1:33767178-33767197 None:intergenic 45.0%
GCAATATCTGGTTGTGGACA+AGG + chr1.1:33766969-33766988 None:intergenic 45.0%
TTGGAGAGACCAAAAGCCTA+AGG - chr1.1:33766679-33766698 MS.gene073562:intron 45.0%
TTGGTGTGTGTTTGAATCCG+CGG - chr1.1:33764326-33764345 MS.gene073562:CDS 45.0%
! AGTGAAGAAAGTGGGCTTAG+AGG - chr1.1:33766845-33766864 MS.gene073562:intron 45.0%
! CAATACTATGCTAGCACCGA+CGG + chr1.1:33764601-33764620 None:intergenic 45.0%
! GCATCTAGGTGACCATTTTG+AGG - chr1.1:33767121-33767140 MS.gene073562:intron 45.0%
! GCTAGAGGAAGCTTTATCTG+TGG - chr1.1:33765065-33765084 MS.gene073562:intron 45.0%
!!! ACTTTTTTCCCCCTACTTCC+TGG - chr1.1:33764552-33764571 MS.gene073562:intron 45.0%
!! AAATATCATTATTTATTTAA+AGG + chr1.1:33764754-33764773 None:intergenic 5.0%
!!! AATTTTATTAAAATTTTTGA+AGG - chr1.1:33766605-33766624 MS.gene073562:intron 5.0%
AGATGCACTTGAAGTGCACC+AGG + chr1.1:33767107-33767126 None:intergenic 50.0%
AGGCAACTGTAGTCAGAGTG+TGG + chr1.1:33767005-33767024 None:intergenic 50.0%
ATCACCCAGTTAGAGAACCG+CGG + chr1.1:33764346-33764365 None:intergenic 50.0%
CAACTGTAGTCAGAGTGTGG+TGG + chr1.1:33767002-33767021 None:intergenic 50.0%
CGAGATTCATGTCGTCGCTT+AGG - chr1.1:33763977-33763996 MS.gene073562:CDS 50.0%
GAATCCGCGGTTCTCTAACT+GGG - chr1.1:33764339-33764358 MS.gene073562:CDS 50.0%
GGGAGGCCTAATGCAATATC+TGG + chr1.1:33766981-33767000 None:intergenic 50.0%
GGTGCACTTCAAGTGCATCT+AGG - chr1.1:33767107-33767126 MS.gene073562:intron 50.0%
TGAAGTGCACCAGGAATGTG+TGG + chr1.1:33767098-33767117 None:intergenic 50.0%
TGAATCCGCGGTTCTCTAAC+TGG - chr1.1:33764338-33764357 MS.gene073562:CDS 50.0%
!! CTAGCACCGACGGAATGAAA+AGG + chr1.1:33764591-33764610 None:intergenic 50.0%
!! GCACTGATTCACTCACTCCA+TGG + chr1.1:33765047-33765066 None:intergenic 50.0%
GGAGACCGCTAAAGAGCTTG+TGG - chr1.1:33767253-33767272 MS.gene073562:CDS 55.0%
! TGTAGTCAGAGTGTGGTGGG+AGG + chr1.1:33766998-33767017 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 33763776 33767400 33763776 ID=MS.gene073562
chr1.1 mRNA 33763776 33767400 33763776 ID=MS.gene073562.t1;Parent=MS.gene073562
chr1.1 exon 33767167 33767400 33767167 ID=MS.gene073562.t1.exon1;Parent=MS.gene073562.t1
chr1.1 CDS 33767167 33767400 33767167 ID=cds.MS.gene073562.t1;Parent=MS.gene073562.t1
chr1.1 exon 33765893 33766140 33765893 ID=MS.gene073562.t1.exon2;Parent=MS.gene073562.t1
chr1.1 CDS 33765893 33766140 33765893 ID=cds.MS.gene073562.t1;Parent=MS.gene073562.t1
chr1.1 exon 33763776 33764358 33763776 ID=MS.gene073562.t1.exon3;Parent=MS.gene073562.t1
chr1.1 CDS 33763776 33764358 33763776 ID=cds.MS.gene073562.t1;Parent=MS.gene073562.t1
Gene Sequence

>MS.gene073562

ATGGAGAATGGTGAAGACCTAAGTTCATTCTATACTTTAGACAATGCTCAAGAGAAGAGTATCTCTCATGTCCCTCAAAATTTTGTAATTCCAAGCATGCATAGGCCAAATTTGGAATCAAAATATGCTAGTCTTGCTGTTGTTGATATGGCTGCTCTTAAGAATGGCTCAACATCAAGGTCTCGTGTTATTCAAGAAATTCGAGATTCATGTCGTCGCTTAGGTTTCTTTCAAGTAAGTTTCTTGATTTAATATTATGAGTAATACTAATTAATTAACTTCTTATAATAGCAATGTAGTCTTTGGATCCTAAAAAGATATATAATGTAGACTTTGGTAATTGATTTGGGCTTGTACATGAGGCACCCTATATTTTTTCAAGAACTGTTTCCTTTTCAATCCTCTAAACTTCTCGCGCATCTTATGATATTATATAATTCGAAAGATGTTAAAAAAGTTCAAAAATATCCATTTTTTCTGAATTTTGAAATCCAAAATAGAATGTGCGAGAAACTTTGAATATGGGAAAATAAATTCTCTTTTTCATGTCTTGGTGTGTGTTTGAATCCGCGGTTCTCTAACTGGGTGATCCACTTCTTAAATTTGTTGTAAACATACACTGAGCATAAAAATACATATTCAAGCACATGCTTAAATATGTGTCAGCAACATTTTTTTCCACCCTTTATTTTTTTCTTTGAAGAAATTTTTTCCACCCTTTGTTTTTTGTTTTTTGAAGATTTTTTTTTTCACCCTTTGTTATTATACTTTTTTCAACTTTTTTCCCCCTACTTCCTGGTAATACAAACTTTCCTTTTCATTCCGTCGGTGCTAGCATAGTATTGTCTTGTTAACTCTTTTTTAGCAATCTTATTAACTTTCATAATCTAAATTAATATACTTTGAATTTGTAGCATAGAAAATTTATAACAATATAGTGTCTTGTCTTCCCTTTTTTTGGTGGTGTATTGTCTTCCTTTAAATAAATAATGATATTTCTCTCTATCTATTTTTAGGAGAAAACAAAAATAGACCTTTGTCCTGATTTTGTGTGCATGCCAAACTTTTGTATAGTCGGTTTGTGTACAAAAATTAATATACAAAGCCTTTTAAATCTCAACTATTATTTTTTTTAATTAATCAAGAGGTATATGCACTTAAGCTTCTAAAATACAATATATATATATATATATATATATATATATATATATATATATATATATATCGATTCTCATTTGGTTGAATTTGGAAACTTTTCAGGTTGTGAACCATGGAGTGAGTGAATCAGTGCTAGAGGAAGCTTTATCTGTGGCATCCAAATTTTTTGATTTACCGACAAAAGAAAAAGTGAATTTGATGTCAAATGATGTTTATAAGCCAGTAAGATATTGCACAAGCATAAAAGATGGAGTTGATAAAGTTCAGTTTTGGAGGGTTTTTCTCAAACACTACGCTAACCCCTTAAAGGATTGGATTCACATGTGGCCAGAAAATCCATCTGATTACAGGTATTACATTCACTAAAAGGATTGCCTACTCTTACATGCATGTGTCTCGTATATATTATAAACCATTTTATTATATTTAAAAGGATAGCTCTTTTTTATTAATTTATATAGCACATGTGTATATTTTGCATTAAAGTAACTTTTATGTATTCCAGTTGAACAATGGAACTCTACTAGACAGATTGCCCATATTACATTACTCTAATAAATATCTAAAAGTAATCGTATACCGTGACATCACTGCAATTCCATGTTATATATCATATCCATAACCATATGTATGTCACGAGTTAGTTTTGTGGACTTCTAATATTTTCAAAGTATTTTACATTAACATTCAAGCATGTGTTATTAACATTTCAAAGTGTTGGACTTCTCAAACTGTTGTAATATTATAGTTAACTCTTATAAGATATAGGGTTAATTATGTTTTTGGTCCCTACAAAATTGCGACCTTGTAAGTTTAGTCCTTACTTAATTTTAATAGCATTTTTAATCCCTACAAAAAAAAATTTACTTATAATTTTAGTCCCTGCTAAAATAAATTTTGTCTAATTATCCTTAAACTCTTAAATTTTTTAATGATTCTTTTTATACAAGTTTAGAACACTATGAAAGGTTCATTTACAAAAATCTATAATTTTTTAACATGAAATAAATTAAATATGAATTTTTTAAAACGACAAAAGTTTAAGATATAAGTAACAAAAATATGGACGTAGAAATCAAATTTTTGCGAATTTTTTTCGGAGGACCTTTTAACAACGTTCTTAACACGCCTGTAAAAAATTGTTGAAAAACTTAAGAGTTTAAGCATAAATTAAACAAATTTGGATTGAGTAAGGACTAATATTGAGTGCAGAAATTTTTTGTAGGGATCAAAAATGCTATTAAAATTAAGTAAGGACAAACTTACAAGGTCGCAATTTTGTAGGGACCAAAAACATAATTAACCCTAAGATATATACTATTTTAGTTTAAATAAGTAAATGGTCCCCCTAAATATATCAACATTTTATTTTAGTCCCTCTAAATATTTCCTATGCTTTTGGTCCCTCTAAAACTTTCCATCTATGAAATCAATTCATACTTTTTATTCAACTAATGTCCTTCATATTTTTCAATGAAATTTTCCAAAAAAAGGTAGAATATTATGACAATCTCTCCGAATTTTTTTATTTATTTTAACAAAACATGAATTAAATCTGAATTTTTATGTTTTTGATGCTAAAAAATTCATAATAAATTCATGTTATGTTAAAAAATTCTATTTTTTTTTCTTTTGGAAAATATTGTCATAATTTTCTATCCATTTTTGGAAAATTTTATTAAAATTTTTGAAGGTTAGACATTATTTGACCAAAAAATGGGGAGCAATTTCATGAATGGAAAATTTTGGAGAGACCAAAAGCCTAAGGAAAATTTTGGAGGGACTAAAATCAAATGTTGGTATATTTAAGGGGACCATTTACTTATTTAACCCAAAAAAAAAAAACTTTTGAATTAATTAAACAAAATCCTTCTAAATTTGCAGGGAAAAGATGGGAAGATATTGTCAAGAAGTGAAGAAAGTGGGCTTAGAGGTGATGTCAACAATAATTGAAAGTCTTGAAATAAATCCATCAAATCTAACAAAAAACCTTGAAAATGGAATGCAAGTGATTGCAGTGAATTGCTATCCACCTTGTCCACAACCAGATATTGCATTAGGCCTCCCACCACACTCTGACTACAGTTGCCTTACCATTCTATACCAAAGTTGTGAAGGCCTACAAATAATGGATTTTGAGGACAAAACTTGGAAAACAGTACCACACATTCCTGGTGCACTTCAAGTGCATCTAGGTGACCATTTTGAGGTATTAAGCAATGGTTTGTACAAGAGTGTTGTCCATAGGGCTACCCTTAATAAGGACAAAACAAGAATCTCTATTACTAGTTTATTCAGTTTGGGAATGGATGATAAAATGGAGACCGCTAAAGAGCTTGTGGATGATCAAAACCCTAAGAAATATAGGGAAAGCAGCTTTAGAGATTTTCTTGATTTTCTGGCTACCAATGATATTTCTGAAGGGAAGAGCTTCATTGATATCCTCAAGAACAATAACTACAACTAA
Protein sequence

>MS.gene073562.t1

MENGEDLSSFYTLDNAQEKSISHVPQNFVIPSMHRPNLESKYASLAVVDMAALKNGSTSRSRVIQEIRDSCRRLGFFQVVNHGVSESVLEEALSVASKFFDLPTKEKVNLMSNDVYKPVRYCTSIKDGVDKVQFWRVFLKHYANPLKDWIHMWPENPSDYREKMGRYCQEVKKVGLEVMSTIIESLEINPSNLTKNLENGMQVIAVNCYPPCPQPDIALGLPPHSDYSCLTILYQSCEGLQIMDFEDKTWKTVPHIPGALQVHLGDHFEVLSNGLYKSVVHRATLNKDKTRISITSLFSLGMDDKMETAKELVDDQNPKKYRESSFRDFLDFLATNDISEGKSFIDILKNNNYN