AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene073636

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene073636.t1 MTR_1g050740 98.976 781 7 1 1 780 1 781 0.0 1604
MS.gene073636.t1 MTR_7g089950 70.690 812 186 12 1 780 1 792 0.0 1126
MS.gene073636.t1 MTR_3g014650 61.857 797 225 17 8 780 33 774 0.0 942
MS.gene073636.t1 MTR_8g039100 61.041 788 252 14 6 780 6 751 0.0 932
MS.gene073636.t1 MTR_3g073100 49.461 742 296 12 55 779 52 731 0.0 662
MS.gene073636.t1 MTR_3g073100 36.842 114 68 1 47 160 137 246 2.14e-14 77.8
MS.gene073636.t1 MTR_3g097260 49.384 731 288 14 55 779 50 704 0.0 630
MS.gene073636.t1 MTR_1g062740 43.495 784 365 16 56 776 47 815 0.0 605
MS.gene073636.t1 MTR_5g459450 48.350 697 304 16 106 779 69 732 0.0 572
MS.gene073636.t1 MTR_5g459450 62.424 165 62 0 55 219 64 228 9.25e-66 233
MS.gene073636.t1 MTR_8g088930 39.719 783 376 16 56 774 9 759 0.0 546
MS.gene073636.t1 MTR_8g088930 38.655 119 73 0 54 172 76 194 7.21e-18 89.0
MS.gene073636.t1 MTR_8g088930 39.668 784 376 16 56 774 9 760 0.0 546
MS.gene073636.t1 MTR_8g088930 38.655 119 73 0 54 172 76 194 7.22e-18 89.0
MS.gene073636.t1 MTR_8g095170 45.333 675 319 13 123 779 24 666 7.03e-176 521
MS.gene073636.t1 MTR_8g095170 58.101 179 73 2 58 235 28 205 4.87e-63 224
MS.gene073636.t1 MTR_8g095170 40.000 85 50 1 55 139 118 201 5.33e-11 66.6
MS.gene073636.t1 MTR_8g088930 41.653 617 304 12 56 647 9 594 5.68e-157 472
MS.gene073636.t1 MTR_8g088930 38.655 119 73 0 54 172 76 194 7.37e-18 88.6
MS.gene073636.t1 MTR_8g088930 41.653 617 304 12 56 647 9 594 7.12e-157 472
MS.gene073636.t1 MTR_8g088930 38.655 119 73 0 54 172 76 194 7.49e-18 88.6
MS.gene073636.t1 MTR_8g095170 45.640 539 255 11 123 643 24 542 7.98e-139 422
MS.gene073636.t1 MTR_8g095170 58.101 179 73 2 58 235 28 205 8.17e-63 221
MS.gene073636.t1 MTR_8g095170 40.000 85 50 1 55 139 118 201 7.07e-11 66.2
MS.gene073636.t1 MTR_8g080860 39.674 184 111 0 56 239 16 199 1.02e-34 134
MS.gene073636.t1 MTR_8g080860 35.758 165 104 1 54 216 104 268 4.93e-24 103
MS.gene073636.t1 MTR_8g080860 35.507 138 89 0 59 196 134 271 3.20e-17 83.2
MS.gene073636.t1 MTR_8g080860 39.674 184 111 0 56 239 12 195 1.50e-34 134
MS.gene073636.t1 MTR_8g080860 35.758 165 104 1 54 216 100 264 7.04e-24 102
MS.gene073636.t1 MTR_8g080860 35.507 138 89 0 59 196 130 267 4.45e-17 82.8
MS.gene073636.t1 MTR_4g107460 34.434 212 137 1 35 244 29 240 2.75e-32 129
MS.gene073636.t1 MTR_4g107460 37.778 180 111 1 62 240 11 190 6.93e-30 122
MS.gene073636.t1 MTR_4g107460 34.722 144 94 0 62 205 104 247 4.21e-20 92.8
MS.gene073636.t1 MTR_4g107460 39.000 100 60 1 148 246 5 104 4.40e-11 65.5
MS.gene073636.t1 MTR_8g092090 32.692 208 130 2 50 247 20 227 2.43e-29 117
MS.gene073636.t1 MTR_8g092090 30.726 179 113 1 38 205 53 231 2.65e-20 91.3
MS.gene073636.t1 MTR_8g092090 27.222 180 100 2 98 246 1 180 6.83e-15 75.5
MS.gene073636.t1 MTR_6g043150 38.021 192 118 1 57 247 7 198 4.11e-28 116
MS.gene073636.t1 MTR_6g043150 36.239 218 114 2 54 246 71 288 1.76e-27 114
MS.gene073636.t1 MTR_6g043150 36.813 182 115 0 54 235 142 323 2.88e-23 102
MS.gene073636.t1 MTR_6g043150 30.380 237 154 2 21 246 75 311 2.32e-21 96.3
MS.gene073636.t1 MTR_6g043150 43.103 116 66 0 54 169 211 326 7.71e-19 89.0
MS.gene073636.t1 MTR_7g451440 33.161 193 125 1 57 245 189 381 7.37e-27 115
MS.gene073636.t1 MTR_7g451440 33.673 196 123 2 81 273 190 381 9.57e-22 99.8
MS.gene073636.t1 MTR_8g007500 33.161 193 125 1 57 245 194 386 8.87e-27 115
MS.gene073636.t1 MTR_5g010840 34.071 226 111 2 59 246 111 336 5.90e-26 111
MS.gene073636.t1 MTR_5g010840 33.511 188 117 1 54 241 175 354 1.31e-24 107
MS.gene073636.t1 MTR_5g010840 38.793 116 71 0 45 160 250 365 7.15e-17 84.0
MS.gene073636.t1 MTR_5g010840 31.973 147 91 2 106 251 112 250 1.85e-13 73.6
MS.gene073636.t1 MTR_5g010840 30.323 155 108 0 55 209 214 368 2.81e-13 72.8
MS.gene073636.t1 MTR_4g099180 33.846 195 124 1 47 236 154 348 7.20e-26 111
MS.gene073636.t1 MTR_4g099180 32.961 179 117 1 81 256 170 348 2.38e-19 92.0
MS.gene073636.t1 MTR_8g080350 32.314 229 116 3 59 249 125 352 1.51e-25 110
MS.gene073636.t1 MTR_8g080350 31.544 149 87 2 54 187 189 337 1.54e-13 73.6
MS.gene073636.t1 MTR_8g080350 24.082 245 137 6 87 284 86 328 1.65e-11 67.4
MS.gene073636.t1 MTR_3g005910 64.865 74 24 1 502 575 1 72 1.31e-24 98.2
MS.gene073636.t1 MTR_2g078470 32.018 228 109 2 60 241 79 306 1.43e-24 107
MS.gene073636.t1 MTR_2g078470 30.901 233 160 1 54 285 142 374 2.70e-23 103
MS.gene073636.t1 MTR_2g078470 34.579 214 117 1 56 246 6 219 1.23e-21 98.2
MS.gene073636.t1 MTR_2g078470 33.152 184 123 0 58 241 54 237 2.39e-21 97.4
MS.gene073636.t1 MTR_2g078470 33.133 166 111 0 82 247 9 174 3.17e-14 75.5
MS.gene073636.t1 MTR_8g080340 38.298 141 86 1 56 196 16 155 6.84e-24 99.8
MS.gene073636.t1 MTR_8g080340 39.695 131 77 2 87 216 23 152 1.41e-20 90.1
MS.gene073636.t1 MTR_8g080340 35.507 138 89 0 107 244 20 157 3.69e-17 80.1
MS.gene073636.t1 MTR_8g080340 30.128 156 102 3 133 288 23 171 2.91e-15 74.7
MS.gene073636.t1 MTR_5g058920 30.131 229 153 2 6 230 142 367 2.19e-23 104
MS.gene073636.t1 MTR_5g058920 38.281 128 79 0 62 189 245 372 6.98e-19 90.5
MS.gene073636.t1 MTR_5g058920 33.540 161 107 0 81 241 195 355 4.20e-18 88.2
MS.gene073636.t1 MTR_5g058920 33.099 142 95 0 105 246 196 337 5.26e-13 72.4
MS.gene073636.t1 MTR_8g095240 34.673 199 97 2 65 230 9 207 3.07e-23 103
MS.gene073636.t1 MTR_8g095240 29.004 231 126 4 59 251 118 348 2.78e-16 82.4
MS.gene073636.t1 MTR_3g072650 29.060 234 159 3 1 230 125 355 6.22e-23 102
MS.gene073636.t1 MTR_3g072650 31.126 151 104 0 96 246 175 325 1.47e-14 77.0
MS.gene073636.t1 MTR_3g072650 29.060 234 159 3 1 230 125 355 1.14e-22 102
MS.gene073636.t1 MTR_3g072650 31.126 151 104 0 96 246 175 325 1.83e-14 77.0
MS.gene073636.t1 MTR_8g080310 33.557 149 99 0 82 230 9 157 2.59e-19 85.9
MS.gene073636.t1 MTR_8g080310 33.566 143 95 0 65 207 15 157 8.73e-17 78.6
MS.gene073636.t1 MTR_8g080310 33.099 142 95 0 99 240 3 144 2.06e-16 77.8
MS.gene073636.t1 MTR_4g099180 34.286 140 87 1 47 181 154 293 6.38e-17 82.8
MS.gene073636.t1 MTR_4g099180 33.333 129 77 1 67 195 165 284 1.83e-13 72.4
MS.gene073636.t1 MTR_4g099180 31.452 124 85 0 104 227 170 293 5.29e-13 71.2
MS.gene073636.t1 MTR_4g099180 35.000 140 86 1 47 181 154 293 9.66e-17 82.8
MS.gene073636.t1 MTR_4g099180 34.783 115 75 0 81 195 170 284 4.63e-13 71.6
MS.gene073636.t1 MTR_4g099180 30.645 124 86 0 104 227 170 293 2.52e-12 69.3
MS.gene073636.t1 MTR_3g023310 35.433 127 69 2 73 199 9 122 1.49e-13 70.1
MS.gene073636.t1 MTR_8g092410 32.331 133 86 3 96 224 145 277 4.63e-13 72.0
MS.gene073636.t1 MTR_8g092410 37.190 121 71 3 60 176 156 275 1.47e-11 67.4
MS.gene073636.t1 MTR_8g092410 29.747 158 92 4 98 248 133 278 4.35e-11 65.9
MS.gene073636.t1 MTR_1g112280 26.977 215 112 5 17 211 552 741 4.97e-13 73.2
MS.gene073636.t1 MTR_1g097110 33.831 201 105 11 456 639 1314 1503 1.53e-11 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene073636.t1 AT3G56960 68.125 800 214 10 1 780 1 779 0.0 1125
MS.gene073636.t1 AT3G56960 68.125 800 214 10 1 780 1 779 0.0 1125
MS.gene073636.t1 AT2G41210 68.262 794 215 9 2 780 1 772 0.0 1122
MS.gene073636.t1 AT3G07960 66.532 744 189 12 51 780 18 715 0.0 1006
MS.gene073636.t1 AT3G07960 64.561 649 170 12 51 685 18 620 0.0 839
MS.gene073636.t1 AT3G07960 65.434 622 160 10 51 658 18 598 0.0 823
MS.gene073636.t1 AT3G07960 65.434 622 160 10 51 658 18 598 0.0 823
MS.gene073636.t1 AT1G77740 53.753 746 260 14 55 779 72 753 0.0 732
MS.gene073636.t1 AT1G77740 40.000 90 54 0 49 138 158 247 9.39e-16 82.0
MS.gene073636.t1 AT1G77740 53.753 746 260 14 55 779 72 753 0.0 732
MS.gene073636.t1 AT1G77740 40.000 90 54 0 49 138 158 247 9.39e-16 82.0
MS.gene073636.t1 AT3G09920 41.268 836 412 18 1 780 1 813 0.0 590
MS.gene073636.t1 AT3G09920 41.268 836 412 18 1 780 1 813 0.0 590
MS.gene073636.t1 AT3G09920 41.268 836 412 18 1 780 1 813 0.0 590
MS.gene073636.t1 AT3G09920 41.268 836 412 18 1 780 1 813 0.0 590
MS.gene073636.t1 AT1G21980 48.773 693 294 14 130 779 77 751 0.0 581
MS.gene073636.t1 AT1G21980 61.798 178 68 0 55 232 71 248 1.46e-71 249
MS.gene073636.t1 AT1G21980 40.000 85 51 0 54 138 162 246 2.73e-14 77.4
MS.gene073636.t1 AT1G60890 40.180 779 398 12 55 780 18 781 0.0 573
MS.gene073636.t1 AT1G60890 40.102 783 401 12 51 780 2 769 0.0 573
MS.gene073636.t1 AT1G10900 39.457 773 395 13 55 779 6 753 0.0 546
MS.gene073636.t1 AT1G10900 35.664 143 92 0 98 240 3 145 2.11e-18 90.5
MS.gene073636.t1 AT1G10900 39.457 773 395 13 55 779 6 753 0.0 546
MS.gene073636.t1 AT1G10900 35.664 143 92 0 98 240 3 145 2.11e-18 90.5
MS.gene073636.t1 AT1G10900 39.457 773 395 13 55 779 6 753 0.0 546
MS.gene073636.t1 AT1G10900 35.664 143 92 0 98 240 3 145 2.11e-18 90.5
MS.gene073636.t1 AT2G26420 45.495 677 316 13 130 779 54 704 2.51e-175 521
MS.gene073636.t1 AT2G26420 54.054 185 85 0 51 235 44 228 2.14e-63 226
MS.gene073636.t1 AT2G26420 45.723 678 327 14 130 779 54 718 7.60e-175 520
MS.gene073636.t1 AT2G26420 54.054 185 85 0 51 235 44 228 1.65e-63 226
MS.gene073636.t1 AT2G26420 45.723 678 327 14 130 779 54 718 7.60e-175 520
MS.gene073636.t1 AT2G26420 54.054 185 85 0 51 235 44 228 1.65e-63 226
MS.gene073636.t1 AT4G01190 35.878 393 193 7 429 776 12 390 4.31e-69 233
MS.gene073636.t1 AT4G01190 36.041 394 191 8 429 776 22 400 7.72e-69 233
MS.gene073636.t1 AT4G01190 36.041 394 191 8 429 776 22 400 7.72e-69 233
MS.gene073636.t1 AT1G01460 41.629 221 124 3 422 642 13 228 1.36e-50 183
MS.gene073636.t1 AT1G01460 42.574 101 44 2 687 779 328 422 3.44e-16 82.4
MS.gene073636.t1 AT1G77660 32.086 187 127 0 44 230 162 348 1.42e-25 110
MS.gene073636.t1 AT1G77660 38.281 128 79 0 62 189 226 353 2.09e-19 92.0
MS.gene073636.t1 AT1G77660 32.386 176 119 0 77 252 172 347 2.33e-19 92.0
MS.gene073636.t1 AT2G35170 33.333 186 124 0 63 248 229 414 5.45e-25 109
MS.gene073636.t1 AT2G35170 33.193 238 143 7 58 294 210 432 2.32e-21 98.6
MS.gene073636.t1 AT1G21920 34.706 170 111 0 61 230 175 344 1.48e-24 106
MS.gene073636.t1 AT1G21920 32.632 190 124 1 77 266 168 353 1.07e-18 89.4
MS.gene073636.t1 AT1G21920 35.294 136 88 0 54 189 214 349 4.52e-18 87.4
MS.gene073636.t1 AT1G21920 34.706 170 111 0 61 230 175 344 1.49e-24 107
MS.gene073636.t1 AT1G21920 32.632 190 124 1 77 266 168 353 1.41e-18 89.4
MS.gene073636.t1 AT1G21920 35.294 136 88 0 54 189 214 349 5.51e-18 87.8
MS.gene073636.t1 AT4G17080 32.941 170 114 0 61 230 258 427 2.99e-24 107
MS.gene073636.t1 AT4G17080 29.018 224 147 2 67 287 250 464 9.53e-22 100
MS.gene073636.t1 AT4G17080 34.014 147 97 0 65 211 285 431 2.31e-20 95.9
MS.gene073636.t1 AT1G75010 32.061 131 80 3 88 211 602 730 4.58e-13 73.6

Find 222 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTGCCTCTTTGATTTCTT+TGG 0.110171 1.1:+34948575 None:intergenic
AATGGAGGAATGGGAGTATT+TGG 0.173763 1.1:-34949144 MS.gene073636:CDS
TTACATTGTGTCAAGTTAAA+TGG 0.204066 1.1:-34947811 MS.gene073636:CDS
AAGCGTGCAAATAGCATATT+TGG 0.241003 1.1:-34949619 MS.gene073636:CDS
TACTAATGGGGATACTTATA+AGG 0.245430 1.1:-34949308 MS.gene073636:CDS
CAAGTGATAGAATGCATTTA+TGG 0.272504 1.1:-34948739 MS.gene073636:CDS
TAGATGGGCAAGTATCAAAT+TGG 0.272979 1.1:-34946923 MS.gene073636:CDS
ATGGAGGAATGGGAGTATTT+GGG 0.273175 1.1:-34949143 MS.gene073636:CDS
TTGATTCCAAAGAGAAAGTA+TGG 0.274808 1.1:-34948349 MS.gene073636:CDS
GTTCATTTGTTTGGAGTAAT+GGG 0.280218 1.1:-34949114 MS.gene073636:CDS
CGGATGTGGAGGCGTATATT+TGG 0.281881 1.1:+34948304 None:intergenic
TCTAGTCCATACTTTCTCTT+TGG 0.288381 1.1:+34948343 None:intergenic
TCAATTTACAATTGGGAATC+AGG 0.288580 1.1:-34948511 MS.gene073636:intron
AAAATTCCCTCAGAACTCTT+AGG 0.292562 1.1:-34948157 MS.gene073636:intron
AGAATGGAGAAGGGGTTTGC+AGG 0.293211 1.1:-34949215 MS.gene073636:CDS
CGACAGGGACTGTGAGCTTC+TGG 0.298065 1.1:-34947299 MS.gene073636:CDS
AAATGGACCTTCTCAGAAAA+AGG 0.301997 1.1:-34947794 MS.gene073636:intron
CAGGTACGATTTATCATAAT+GGG 0.302975 1.1:-34947637 MS.gene073636:CDS
TCAGGTACGATTTATCATAA+TGG 0.305456 1.1:-34947638 MS.gene073636:intron
TTAAAAGTTCCATTCCCTTT+AGG 0.308983 1.1:+34949058 None:intergenic
GGGAAGATGGTTTGCCTAAA+GGG 0.309677 1.1:-34949072 MS.gene073636:CDS
TCTGGAACAGGAGGGAATTA+TGG 0.310567 1.1:-34947281 MS.gene073636:CDS
GAAGGAGATCTTATTCCTTC+AGG 0.311223 1.1:-34947214 MS.gene073636:CDS
GGAAGGTTCACTTGGCCTTC+AGG 0.314076 1.1:-34949391 MS.gene073636:CDS
GGAGTTCAAGAGTGGTTATA+TGG 0.324022 1.1:-34949353 MS.gene073636:CDS
AAGATGAGAACTATTATATT+GGG 0.327508 1.1:-34949168 MS.gene073636:CDS
GGAATAGGTATGATGGCTAT+TGG 0.329268 1.1:-34949093 MS.gene073636:CDS
CCTAATGGAGATTACTATAA+AGG 0.342048 1.1:-34949514 MS.gene073636:CDS
AAAGATGAGAACTATTATAT+TGG 0.343138 1.1:-34949169 MS.gene073636:CDS
GGGGTAAAGGTTCATTTGTT+TGG 0.347168 1.1:-34949123 MS.gene073636:CDS
CGCAAGAGGGTCATCTTGAT+TGG 0.353038 1.1:-34948943 MS.gene073636:CDS
AACTTCTGCTAGATCCTTCC+AGG 0.357718 1.1:-34947026 MS.gene073636:intron
TTGTTTGGAGTAATGGGAAT+AGG 0.360376 1.1:-34949108 MS.gene073636:CDS
GCTCATGCTCAATTTACAAT+TGG 0.362297 1.1:-34948519 MS.gene073636:CDS
ATTCTTGTGTCCTTTGCATA+TGG 0.366334 1.1:+34948547 None:intergenic
AGGCGTATATTTGGATCCTT+CGG 0.367813 1.1:+34948313 None:intergenic
GTGCATACACTGCTACTAAT+GGG 0.376993 1.1:-34949321 MS.gene073636:CDS
GGTTCATTTGTTTGGAGTAA+TGG 0.378193 1.1:-34949115 MS.gene073636:CDS
CCTTTATAGTAATCTCCATT+AGG 0.378650 1.1:+34949514 None:intergenic
GGTGCATACACTGCTACTAA+TGG 0.379224 1.1:-34949322 MS.gene073636:CDS
GCATCCACTGACATTCTTCT+CGG 0.385623 1.1:+34948791 None:intergenic
GATTTGAAGGGTTCTTCACT+TGG 0.386077 1.1:-34947574 MS.gene073636:CDS
GAGATAAGTATGAGGGAGAA+TGG 0.398925 1.1:-34949231 MS.gene073636:CDS
GGCGTATATTTGGATCCTTC+GGG 0.400723 1.1:+34948314 None:intergenic
GGTGCTTTCAAAGTTTGTCT+TGG 0.403471 1.1:+34948596 None:intergenic
GAATAGGTATGATGGCTATT+GGG 0.408479 1.1:-34949092 MS.gene073636:CDS
CATGTCTTCTCGTGAAATAC+GGG 0.411112 1.1:+34947053 None:intergenic
CTGCGTGAACTTTCTTCGCC+TGG 0.413219 1.1:-34948077 MS.gene073636:CDS
CCATGTCTTCTCGTGAAATA+CGG 0.420600 1.1:+34947052 None:intergenic
TATGTTCCACTCTGATCTCT+TGG 0.423850 1.1:+34948992 None:intergenic
GTTTCAGTAATCTCTGACTC+AGG 0.427126 1.1:+34947535 None:intergenic
CTCATGCTCAATTTACAATT+GGG 0.427873 1.1:-34948518 MS.gene073636:CDS
GGACTGTGAGCTTCTGGAAC+AGG 0.430564 1.1:-34947293 MS.gene073636:CDS
TATTTCGACTACAACGATCT+TGG 0.431632 1.1:-34947480 MS.gene073636:CDS
ATCCGTCCAGTGAGTTCAAA+TGG 0.435350 1.1:-34948286 MS.gene073636:CDS
ATCGTATTGAATGGACTTGT+AGG 0.441021 1.1:+34946741 None:intergenic
GAATGCATTTATGGGGCGGC+GGG 0.442405 1.1:-34948730 MS.gene073636:CDS
TTATGTAGGTAATTGGAGTA+AGG 0.442669 1.1:-34949017 MS.gene073636:CDS
GCAGAGAGGGTTCTACCTAA+TGG 0.444056 1.1:-34949529 MS.gene073636:CDS
ACGGGAAAGGGAAGTACTTA+TGG 0.445335 1.1:-34949468 MS.gene073636:CDS
AAGTGATAGAATGCATTTAT+GGG 0.445755 1.1:-34948738 MS.gene073636:CDS
ACCAAAGAAATCAAAGAGGC+AGG 0.446584 1.1:-34948576 MS.gene073636:CDS
GAGATTACTATAAAGGAGAA+TGG 0.447048 1.1:-34949507 MS.gene073636:CDS
ACATAGACGCTTTGATTTGA+AGG 0.448858 1.1:-34947587 MS.gene073636:CDS
ACCTCATAGTACTCTCCAAT+TGG 0.449728 1.1:+34946829 None:intergenic
CAAATCAAAGCGTCTATGTA+TGG 0.450308 1.1:+34947591 None:intergenic
CATTTATGGGGCGGCGGGGA+AGG 0.451650 1.1:-34948725 MS.gene073636:CDS
TATGATGGCTATTGGGAAGA+TGG 0.455519 1.1:-34949085 MS.gene073636:CDS
ATATTGGGGAATGGAGGAAT+GGG 0.458059 1.1:-34949153 MS.gene073636:CDS
TATATTGGGGAATGGAGGAA+TGG 0.460284 1.1:-34949154 MS.gene073636:CDS
TGGGAAGATGGTTTGCCTAA+AGG 0.464773 1.1:-34949073 MS.gene073636:CDS
AGTGGTTATATGGATGGAAT+AGG 0.464894 1.1:-34949343 MS.gene073636:CDS
CTCTTGCGATTGCGATGACC+CGG 0.466168 1.1:+34948958 None:intergenic
CATAAATGCATTCTATCACT+TGG 0.466407 1.1:+34948740 None:intergenic
AGAAGAATGTCAGTGGATGC+AGG 0.469195 1.1:-34948788 MS.gene073636:CDS
GAAGGAATAAGATCTCCTTC+TGG 0.470635 1.1:+34947217 None:intergenic
GGATCTCATACTCCACTTGA+TGG 0.471875 1.1:-34947193 MS.gene073636:intron
AACTCATGATCATCTTTAGT+TGG 0.472630 1.1:+34948650 None:intergenic
TCATTGTCTTAATCATATAA+CGG 0.474615 1.1:+34948018 None:intergenic
AATCATATAACGGTCATCAT+TGG 0.476059 1.1:+34948028 None:intergenic
CCGTATTTCACGAGAAGACA+TGG 0.478125 1.1:-34947052 MS.gene073636:CDS
AACTCTTAGGAAGCTATTCA+AGG 0.480921 1.1:-34948144 MS.gene073636:CDS
CCTTCAGGACCAGCTTATGA+AGG 0.481439 1.1:-34949376 MS.gene073636:CDS
AAAGATGATCATGAGTTGCT+TGG 0.483527 1.1:-34948644 MS.gene073636:CDS
ATAACTTCCCGCACGGGAAA+GGG 0.484725 1.1:-34949480 MS.gene073636:CDS
GTCCTTCCATTTGAACTCAC+TGG 0.484867 1.1:+34948280 None:intergenic
GTATGAGGGAGAATGGAGAA+GGG 0.485541 1.1:-34949224 MS.gene073636:CDS
CGAAAATGATTGTAATAAGC+GGG 0.486540 1.1:+34947871 None:intergenic
ACTGTCCTTTCAACCCGTGC+TGG 0.490246 1.1:+34946889 None:intergenic
TGGATCAACGGCTGATATTG+AGG 0.491601 1.1:+34946714 None:intergenic
TGAGGTTGGATCGTATTGAA+TGG 0.491626 1.1:+34946732 None:intergenic
AGTACTTCCCTTTCCCGTGC+GGG 0.493055 1.1:+34949473 None:intergenic
GATAACTTCCCGCACGGGAA+AGG 0.493289 1.1:-34949481 MS.gene073636:CDS
GATGGTAATAGAACTCCAAC+TGG 0.495992 1.1:-34948701 MS.gene073636:CDS
ACTAATGGGGATACTTATAA+GGG 0.499615 1.1:-34949307 MS.gene073636:CDS
AGTATGAGGGAGAATGGAGA+AGG 0.501294 1.1:-34949225 MS.gene073636:CDS
TTCGAATGGAGATAAGTATG+AGG 0.509090 1.1:-34949239 MS.gene073636:CDS
AGTGAGTATCAAGTTAGTCC+TGG 0.511916 1.1:-34948893 MS.gene073636:CDS
ACTGGTAATAGAACTCCAAC+TGG 0.513152 1.1:-34948683 MS.gene073636:CDS
AATGGGAGTATTTGGGGTAA+AGG 0.513194 1.1:-34949136 MS.gene073636:CDS
GATGTATATATGTCGGAGAA+TGG 0.513464 1.1:-34949438 MS.gene073636:CDS
TCGAAAATGATTGTAATAAG+CGG 0.514277 1.1:+34947870 None:intergenic
ATGATCACAGGCAAATCGAC+AGG 0.515970 1.1:-34947315 MS.gene073636:intron
TTGAACTCCCCTTCATAAGC+TGG 0.516325 1.1:+34949367 None:intergenic
TCAAGTTAGTCCTGGGGAGA+AGG 0.516462 1.1:-34948885 MS.gene073636:CDS
AGATGGGCAAGTATCAAATT+GGG 0.517493 1.1:-34946922 MS.gene073636:CDS
GGAACATATTATCCTTCTCC+CGG 0.517707 1.1:-34948977 MS.gene073636:CDS
GCAAGAGGGTCATCTTGATT+GGG 0.517961 1.1:-34948942 MS.gene073636:CDS
TCAACGGCTGATATTGAGGT+TGG 0.519212 1.1:+34946718 None:intergenic
AAACGCCTCGAGTATTGTCT+TGG 0.525011 1.1:+34946694 None:intergenic
AGATTACTATAAAGGAGAAT+GGG 0.528597 1.1:-34949506 MS.gene073636:CDS
CGAGTATTGTCTTGGATCAA+CGG 0.529705 1.1:+34946702 None:intergenic
CATAGACGCTTTGATTTGAA+GGG 0.529755 1.1:-34947586 MS.gene073636:CDS
TTCAAGAGTGGTTATATGGA+TGG 0.530449 1.1:-34949349 MS.gene073636:CDS
GATGCAGGGAGGGCAAGTGT+AGG 0.531839 1.1:-34948773 MS.gene073636:CDS
GATTACATGTTATCTATATG+TGG 0.538155 1.1:-34948110 MS.gene073636:CDS
TAAAGACAGTAGTATGATGA+AGG 0.538744 1.1:-34949683 MS.gene073636:CDS
TGGGGCGGCGGGGAAGGTGA+TGG 0.539051 1.1:-34948719 MS.gene073636:CDS
AGGGGTTTGCAGGATGGACA+AGG 0.539233 1.1:-34949205 MS.gene073636:CDS
ACAGTAGTATGATGAAGGCA+TGG 0.540566 1.1:-34949678 MS.gene073636:CDS
GTGAGTATCAAGTTAGTCCT+GGG 0.541149 1.1:-34948892 MS.gene073636:CDS
AGAACTATTATATTGGGGAA+TGG 0.542557 1.1:-34949162 MS.gene073636:CDS
ATGGACTATAGTCTACTAGT+TGG 0.542989 1.1:-34947262 MS.gene073636:CDS
GCATATAATAGGCATTCTGT+TGG 0.543355 1.1:-34948416 MS.gene073636:intron
CCTTCATAAGCTGGTCCTGA+AGG 0.544182 1.1:+34949376 None:intergenic
TTGAACTCACTGGACGGATG+TGG 0.545333 1.1:+34948290 None:intergenic
TATGAGGGAGAATGGAGAAG+GGG 0.546679 1.1:-34949223 MS.gene073636:CDS
GGATACTTATAAGGGACAAT+GGG 0.546935 1.1:-34949299 MS.gene073636:CDS
TGGAGAAGGGGTTTGCAGGA+TGG 0.547536 1.1:-34949211 MS.gene073636:CDS
GATGAAGGCATGGGAGGCCA+CGG 0.548146 1.1:-34949668 MS.gene073636:CDS
AGTAATGGGAATAGGTATGA+TGG 0.548558 1.1:-34949100 MS.gene073636:CDS
ATGTAAAATAACAAAATGAT+GGG 0.549385 1.1:-34949706 None:intergenic
TCTTTGGAATCAAAAGCTGA+AGG 0.549760 1.1:+34948359 None:intergenic
CAACTCGTAGGAGAACCAAT+TGG 0.552371 1.1:-34946844 MS.gene073636:CDS
TGGGAAAGGGAAGGTTCACT+TGG 0.554254 1.1:-34949399 MS.gene073636:CDS
ATGCAGGGAGGGCAAGTGTA+GGG 0.554397 1.1:-34948772 MS.gene073636:CDS
ATTTGAAGGGTTCTTCACTT+GGG 0.558907 1.1:-34947573 MS.gene073636:CDS
GTTGGAGTTCTACTACCAGT+TGG 0.560041 1.1:+34948668 None:intergenic
ATATGCCAGCACGGGTTGAA+AGG 0.562062 1.1:-34946894 MS.gene073636:CDS
CCAAAGAAATCAAAGAGGCA+GGG 0.564458 1.1:-34948575 MS.gene073636:CDS
TGGAGGAATGGGAGTATTTG+GGG 0.565397 1.1:-34949142 MS.gene073636:CDS
AATGTCAGTGGATGCAGGGA+GGG 0.565624 1.1:-34948783 MS.gene073636:CDS
AACTCAGTATACACTTGTTG+TGG 0.565787 1.1:+34948917 None:intergenic
GATGGTTTGCCTAAAGGGAA+TGG 0.567377 1.1:-34949067 MS.gene073636:CDS
CGGGTCATCGCAATCGCAAG+AGG 0.568227 1.1:-34948957 MS.gene073636:CDS
GATTGCGATGACCCGGGAGA+AGG 0.568916 1.1:+34948965 None:intergenic
TATGTCGGAGAATGGTTCAA+AGG 0.568996 1.1:-34949430 MS.gene073636:CDS
GGGAAGTACTTATGGACAGA+TGG 0.569579 1.1:-34949460 MS.gene073636:CDS
AGAATGCATTTATGGGGCGG+CGG 0.572872 1.1:-34948731 MS.gene073636:CDS
AAAACTGAAACCTTCTCCCC+AGG 0.574665 1.1:+34948875 None:intergenic
CTGTGAGCTTCTGGAACAGG+AGG 0.574774 1.1:-34947290 MS.gene073636:CDS
TCGAATGGAGATAAGTATGA+GGG 0.575640 1.1:-34949238 MS.gene073636:CDS
CTTCAGGACCAGCTTATGAA+GGG 0.577362 1.1:-34949375 MS.gene073636:CDS
ACTATTATATTGGGGAATGG+AGG 0.581377 1.1:-34949159 MS.gene073636:CDS
AGATCATGAAGAAGAAAGCA+AGG 0.581465 1.1:-34949569 MS.gene073636:CDS
TTCCATTTGAACTCACTGGA+CGG 0.581661 1.1:+34948284 None:intergenic
ACTGCAAGTCTCTTCTGTGA+TGG 0.584436 1.1:+34948851 None:intergenic
CGAAAGACATGTGACCTGGA+AGG 0.585910 1.1:+34947012 None:intergenic
GAAGAATGTCAGTGGATGCA+GGG 0.586181 1.1:-34948787 MS.gene073636:CDS
GGGAGTGAATATGCCAGCAC+GGG 0.590690 1.1:-34946902 MS.gene073636:CDS
GTTGGAGTTCTATTACCAGT+TGG 0.592917 1.1:+34948686 None:intergenic
GGGATACTTATAAGGGACAA+TGG 0.593729 1.1:-34949300 MS.gene073636:CDS
TGCAGTGTGGAGGTCTACCA+AGG 0.596941 1.1:-34948834 MS.gene073636:CDS
GTCCAGTGAGTTCAAATGGA+AGG 0.597571 1.1:-34948282 MS.gene073636:CDS
AGATGAGAACTATTATATTG+GGG 0.598798 1.1:-34949167 MS.gene073636:CDS
CAGTAGTATGATGAAGGCAT+GGG 0.599597 1.1:-34949677 MS.gene073636:CDS
AACTCACTGGACGGATGTGG+AGG 0.600098 1.1:+34948293 None:intergenic
ACCAATTGGAGAGTACTATG+AGG 0.601964 1.1:-34946830 MS.gene073636:CDS
AAGAAGTATACCATGCAGAG+AGG 0.602501 1.1:-34949543 MS.gene073636:CDS
GCAGTGTGGAGGTCTACCAA+GGG 0.603480 1.1:-34948833 MS.gene073636:CDS
TTCAGATCTAAAGATGCTGA+GGG 0.605765 1.1:+34948383 None:intergenic
ATGAATTTGAAACATGGTCA+TGG 0.607160 1.1:-34949274 MS.gene073636:CDS
TGGGAGTGAATATGCCAGCA+CGG 0.608917 1.1:-34946903 MS.gene073636:CDS
TTCAAAGATATATCACCAGA+AGG 0.612199 1.1:-34947232 MS.gene073636:CDS
TTTCAGATCTAAAGATGCTG+AGG 0.615317 1.1:+34948382 None:intergenic
AATGCATTTATGGGGCGGCG+GGG 0.616007 1.1:-34948729 MS.gene073636:CDS
GAACATATTATCCTTCTCCC+GGG 0.616837 1.1:-34948976 MS.gene073636:CDS
ACATATGTAGCTTCACAACA+TGG 0.618739 1.1:-34949592 MS.gene073636:CDS
CAGATCTAAAGATGCTGAGG+GGG 0.619054 1.1:+34948385 None:intergenic
TAGTATGATGAAGGCATGGG+AGG 0.619872 1.1:-34949674 MS.gene073636:CDS
ACAGATGGATGTATATATGT+CGG 0.620518 1.1:-34949445 MS.gene073636:CDS
TAGGTAGAACCCTCTCTGCA+TGG 0.622199 1.1:+34949533 None:intergenic
TGGACTAGATTTCCTCCCGA+AGG 0.625505 1.1:-34948329 MS.gene073636:CDS
AGAAGTATACCATGCAGAGA+GGG 0.629096 1.1:-34949542 MS.gene073636:CDS
AGAAGAGACTTGCAGTGTGG+AGG 0.631008 1.1:-34948844 MS.gene073636:CDS
GGGTTGATAACTTCCCGCAC+GGG 0.633125 1.1:-34949486 MS.gene073636:CDS
TGGGTTGATAACTTCCCGCA+CGG 0.634421 1.1:-34949487 MS.gene073636:CDS
GGTGAGACGAGTTATTCGAA+TGG 0.634490 1.1:-34949253 MS.gene073636:CDS
AGGCGAAGAAAGTTCACGCA+GGG 0.634632 1.1:+34948079 None:intergenic
ATGGACAAGGGAGATATGAG+TGG 0.639995 1.1:-34949192 MS.gene073636:CDS
TCTTGCGATTGCGATGACCC+GGG 0.643446 1.1:+34948959 None:intergenic
GGGGTTTGCAGGATGGACAA+GGG 0.643828 1.1:-34949204 MS.gene073636:CDS
TATGAAGGGGAGTTCAAGAG+TGG 0.648354 1.1:-34949361 MS.gene073636:CDS
TTCAGGACCAGCTTATGAAG+GGG 0.648838 1.1:-34949374 MS.gene073636:CDS
TGATCACAGGCAAATCGACA+GGG 0.649507 1.1:-34947314 MS.gene073636:intron
GTATATTTGGATCCTTCGGG+AGG 0.651164 1.1:+34948317 None:intergenic
GATAGAATGCATTTATGGGG+CGG 0.654237 1.1:-34948734 MS.gene073636:CDS
TGCATACACTGCTACTAATG+GGG 0.655254 1.1:-34949320 MS.gene073636:CDS
CAGGGAGAGACCATATGCAA+AGG 0.660979 1.1:-34948557 MS.gene073636:CDS
AGTGATAGAATGCATTTATG+GGG 0.661374 1.1:-34948737 MS.gene073636:CDS
GGGTCATCGCAATCGCAAGA+GGG 0.662210 1.1:-34948956 MS.gene073636:CDS
AAGTACTTCCCTTTCCCGTG+CGG 0.662542 1.1:+34949472 None:intergenic
GATTGTGAATTGCAACTCGT+AGG 0.664829 1.1:-34946856 MS.gene073636:CDS
TAAGACAATGAAGAAAGCTG+AGG 0.665400 1.1:-34948006 MS.gene073636:CDS
CACAGAAGAGACTTGCAGTG+TGG 0.670218 1.1:-34948847 MS.gene073636:CDS
CAGGCGAAGAAAGTTCACGC+AGG 0.671558 1.1:+34948078 None:intergenic
AGTGGAGTATGAGATCCTGA+AGG 0.680944 1.1:+34947199 None:intergenic
TTGATCCAAGACAATACTCG+AGG 0.685927 1.1:-34946699 MS.gene073636:CDS
TGGGTAATGAATTTGAAACA+TGG 0.687560 1.1:-34949280 MS.gene073636:CDS
GAATGTCAGTGGATGCAGGG+AGG 0.688706 1.1:-34948784 MS.gene073636:CDS
TCTTAGGAAGCTATTCAAGG+TGG 0.689065 1.1:-34948141 MS.gene073636:CDS
TGTGAGCTTCTGGAACAGGA+GGG 0.689457 1.1:-34947289 MS.gene073636:CDS
GGCCACGGTGAAGAAGACAC+AGG 0.692992 1.1:-34949653 MS.gene073636:CDS
AAGGATCCAAGAGATCAGAG+TGG 0.693035 1.1:-34948998 MS.gene073636:CDS
AAGCACCAAAGAAATCAAAG+AGG 0.693395 1.1:-34948580 MS.gene073636:CDS
CAGTGTGGAGGTCTACCAAG+GGG 0.694503 1.1:-34948832 MS.gene073636:CDS
ATGTCTTCTCGTGAAATACG+GGG 0.697359 1.1:+34947054 None:intergenic
TGAGTATCAAGTTAGTCCTG+GGG 0.698062 1.1:-34948891 MS.gene073636:CDS
TAAGCCGAGAAGAATGTCAG+TGG 0.727725 1.1:-34948795 MS.gene073636:CDS
AGTGTGGAGGTCTACCAAGG+GGG 0.727979 1.1:-34948831 MS.gene073636:CDS
TCAGATCTAAAGATGCTGAG+GGG 0.729081 1.1:+34948384 None:intergenic
TGCCTGTGTCTTCTTCACCG+TGG 0.733834 1.1:+34949651 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTCCTAGAAAAATAATT+TGG - chr1.1:34949231-34949250 MS.gene073636:CDS 15.0%
!! ATCAATTATAATATGCAAAA+GGG + chr1.1:34948145-34948164 None:intergenic 15.0%
!! TTATAAAATTTATGGATTTC+AGG - chr1.1:34948689-34948708 MS.gene073636:CDS 15.0%
!!! TAATTTGGATGTTAAATTTT+AGG - chr1.1:34949246-34949265 MS.gene073636:CDS 15.0%
!!! TTATTAGCATAATATTGATT+TGG - chr1.1:34948411-34948430 MS.gene073636:intron 15.0%
!! AAAGATGAGAACTATTATAT+TGG - chr1.1:34947176-34947195 MS.gene073636:intron 20.0%
!! AAGATGAGAACTATTATATT+GGG - chr1.1:34947177-34947196 MS.gene073636:intron 20.0%
!! AGACAAGATATATACTATTA+CGG + chr1.1:34949190-34949209 None:intergenic 20.0%
!! ATTGTATATTTGTTTGTAGA+TGG - chr1.1:34949406-34949425 MS.gene073636:CDS 20.0%
!! GATCAATTATAATATGCAAA+AGG + chr1.1:34948146-34948165 None:intergenic 20.0%
!! TATATAACAAACACATGATA+TGG + chr1.1:34949011-34949030 None:intergenic 20.0%
!! TCATTGTCTTAATCATATAA+CGG + chr1.1:34948330-34948349 None:intergenic 20.0%
!! TTGTATATTTGTTTGTAGAT+GGG - chr1.1:34949407-34949426 MS.gene073636:CDS 20.0%
!!! AACATCCAAATTATTTTTCT+AGG + chr1.1:34949239-34949258 None:intergenic 20.0%
!!! AATTTAGATCAAGATCTTTT+AGG + chr1.1:34948842-34948861 None:intergenic 20.0%
!!! ATTTCTTATTCTTTTCAAGA+AGG + chr1.1:34948984-34949003 None:intergenic 20.0%
! AAAAATCGTCTACAACATTT+AGG + chr1.1:34948581-34948600 None:intergenic 25.0%
! AAGTGATAGAATGCATTTAT+GGG - chr1.1:34947607-34947626 MS.gene073636:CDS 25.0%
! AGATGAGAACTATTATATTG+GGG - chr1.1:34947178-34947197 MS.gene073636:intron 25.0%
! AGATTACTATAAAGGAGAAT+GGG - chr1.1:34946839-34946858 MS.gene073636:CDS 25.0%
! ATAAGAAAAATACCATCAAG+TGG + chr1.1:34949167-34949186 None:intergenic 25.0%
! ATTAACTACCTAAAAACTAC+TGG + chr1.1:34948097-34948116 None:intergenic 25.0%
! GATTACATGTTATCTATATG+TGG - chr1.1:34948235-34948254 MS.gene073636:intron 25.0%
! TCGAAAATGATTGTAATAAG+CGG + chr1.1:34948478-34948497 None:intergenic 25.0%
! TTAACTACCTAAAAACTACT+GGG + chr1.1:34948096-34948115 None:intergenic 25.0%
! TTACATTGTGTCAAGTTAAA+TGG - chr1.1:34948534-34948553 MS.gene073636:CDS 25.0%
! TTACTAGTATCTATCCTTAT+AGG - chr1.1:34948624-34948643 MS.gene073636:CDS 25.0%
!! GAAGTTTTTATGTAGGTAAT+TGG - chr1.1:34947321-34947340 MS.gene073636:intron 25.0%
!! TAATTTTCTTATCGAAACCA+AGG - chr1.1:34948380-34948399 MS.gene073636:CDS 25.0%
!!! ATTTTTCTAGGAATTTAACG+AGG + chr1.1:34949227-34949246 None:intergenic 25.0%
!!! TAAATTTTAGGTGATTCAGA+GGG - chr1.1:34949258-34949277 MS.gene073636:CDS 25.0%
!!! TGTTTGTTATATATGATCAC+AGG - chr1.1:34949018-34949037 MS.gene073636:CDS 25.0%
!!! TTAAATTTTAGGTGATTCAG+AGG - chr1.1:34949257-34949276 MS.gene073636:CDS 25.0%
!!! TTTGAGTTGTTGCATATAAT+AGG - chr1.1:34947918-34947937 MS.gene073636:intron 25.0%
AAAGGAAAAACTATGGGAAA+GGG - chr1.1:34946933-34946952 MS.gene073636:intron 30.0%
AACTCATGATCATCTTTAGT+TGG + chr1.1:34947698-34947717 None:intergenic 30.0%
AATCATATAACGGTCATCAT+TGG + chr1.1:34948320-34948339 None:intergenic 30.0%
ACAGATGGATGTATATATGT+CGG - chr1.1:34946900-34946919 MS.gene073636:CDS 30.0%
ACTAATGGGGATACTTATAA+GGG - chr1.1:34947038-34947057 MS.gene073636:CDS 30.0%
AGAACTATTATATTGGGGAA+TGG - chr1.1:34947183-34947202 MS.gene073636:intron 30.0%
AGTGATAGAATGCATTTATG+GGG - chr1.1:34947608-34947627 MS.gene073636:CDS 30.0%
ATGGTTCAAAGGAAAAACTA+TGG - chr1.1:34946926-34946945 MS.gene073636:intron 30.0%
CAAGTGATAGAATGCATTTA+TGG - chr1.1:34947606-34947625 MS.gene073636:CDS 30.0%
CAGGTACGATTTATCATAAT+GGG - chr1.1:34948708-34948727 MS.gene073636:CDS 30.0%
CATAAATGCATTCTATCACT+TGG + chr1.1:34947608-34947627 None:intergenic 30.0%
CCTAATGGAGATTACTATAA+AGG - chr1.1:34946831-34946850 MS.gene073636:CDS 30.0%
CCTTTATAGTAATCTCCATT+AGG + chr1.1:34946834-34946853 None:intergenic 30.0%
CGAAAATGATTGTAATAAGC+GGG + chr1.1:34948477-34948496 None:intergenic 30.0%
CTCATGCTCAATTTACAATT+GGG - chr1.1:34947827-34947846 MS.gene073636:CDS 30.0%
GAAATGTATGCTTTCCTATA+AGG + chr1.1:34948641-34948660 None:intergenic 30.0%
GAGATTACTATAAAGGAGAA+TGG - chr1.1:34946838-34946857 MS.gene073636:CDS 30.0%
TAAAGACAGTAGTATGATGA+AGG - chr1.1:34946662-34946681 MS.gene073636:CDS 30.0%
TACTAATGGGGATACTTATA+AGG - chr1.1:34947037-34947056 MS.gene073636:CDS 30.0%
TCAATTTACAATTGGGAATC+AGG - chr1.1:34947834-34947853 MS.gene073636:CDS 30.0%
TCAGGTACGATTTATCATAA+TGG - chr1.1:34948707-34948726 MS.gene073636:CDS 30.0%
TGGTATACTCAGAACAAAAA+AGG + chr1.1:34948737-34948756 None:intergenic 30.0%
TGGTTCAAAGGAAAAACTAT+GGG - chr1.1:34946927-34946946 MS.gene073636:intron 30.0%
TTAAAAGTTCCATTCCCTTT+AGG + chr1.1:34947290-34947309 None:intergenic 30.0%
TTATGTAGGTAATTGGAGTA+AGG - chr1.1:34947328-34947347 MS.gene073636:intron 30.0%
TTCAAAGATATATCACCAGA+AGG - chr1.1:34949113-34949132 MS.gene073636:CDS 30.0%
TTGATTCCAAAGAGAAAGTA+TGG - chr1.1:34947996-34948015 MS.gene073636:intron 30.0%
! AAGGGAATGGAACTTTTAAA+TGG - chr1.1:34947291-34947310 MS.gene073636:CDS 30.0%
! AGGGAATGGAACTTTTAAAT+GGG - chr1.1:34947292-34947311 MS.gene073636:CDS 30.0%
! ATGAATTTGAAACATGGTCA+TGG - chr1.1:34947071-34947090 MS.gene073636:CDS 30.0%
! GTTCATTTGTTTGGAGTAAT+GGG - chr1.1:34947231-34947250 MS.gene073636:CDS 30.0%
! TGGGTAATGAATTTGAAACA+TGG - chr1.1:34947065-34947084 MS.gene073636:CDS 30.0%
!! AAATTTTAGGTGATTCAGAG+GGG - chr1.1:34949259-34949278 MS.gene073636:CDS 30.0%
!! TAGATCAAGATCTTTTAGGA+TGG + chr1.1:34948838-34948857 None:intergenic 30.0%
!!! ACATGCTGATTTTATTTTGC+AGG - chr1.1:34948434-34948453 MS.gene073636:intron 30.0%
!!! CTTGGTTTTTAGAATTTTGC+AGG - chr1.1:34948883-34948902 MS.gene073636:CDS 30.0%
!!! TATGAGGTTGTCTTGTTTTT+CGG - chr1.1:34949531-34949550 MS.gene073636:CDS 30.0%
AAAATTCCCTCAGAACTCTT+AGG - chr1.1:34948188-34948207 MS.gene073636:intron 35.0%
AAAGATGATCATGAGTTGCT+TGG - chr1.1:34947701-34947720 MS.gene073636:intron 35.0%
AAATGGACCTTCTCAGAAAA+AGG - chr1.1:34948551-34948570 MS.gene073636:CDS 35.0%
AACTCTTAGGAAGCTATTCA+AGG - chr1.1:34948201-34948220 MS.gene073636:intron 35.0%
AAGCACCAAAGAAATCAAAG+AGG - chr1.1:34947765-34947784 MS.gene073636:intron 35.0%
AAGCGTGCAAATAGCATATT+TGG - chr1.1:34946726-34946745 MS.gene073636:CDS 35.0%
ACATATGTAGCTTCACAACA+TGG - chr1.1:34946753-34946772 MS.gene073636:CDS 35.0%
ACTATTATATTGGGGAATGG+AGG - chr1.1:34947186-34947205 MS.gene073636:intron 35.0%
AGATCATGAAGAAGAAAGCA+AGG - chr1.1:34946776-34946795 MS.gene073636:CDS 35.0%
AGATGGGCAAGTATCAAATT+GGG - chr1.1:34949423-34949442 MS.gene073636:CDS 35.0%
AGTGGTTATATGGATGGAAT+AGG - chr1.1:34947002-34947021 MS.gene073636:intron 35.0%
ATTCTTGTGTCCTTTGCATA+TGG + chr1.1:34947801-34947820 None:intergenic 35.0%
ATTTGAAGGGTTCTTCACTT+GGG - chr1.1:34948772-34948791 MS.gene073636:CDS 35.0%
CAAAGGAAAAACTATGGGAA+AGG - chr1.1:34946932-34946951 MS.gene073636:intron 35.0%
GAATAGGTATGATGGCTATT+GGG - chr1.1:34947253-34947272 MS.gene073636:CDS 35.0%
GATGTATATATGTCGGAGAA+TGG - chr1.1:34946907-34946926 MS.gene073636:CDS 35.0%
GCATATAATAGGCATTCTGT+TGG - chr1.1:34947929-34947948 MS.gene073636:intron 35.0%
GCTCATGCTCAATTTACAAT+TGG - chr1.1:34947826-34947845 MS.gene073636:CDS 35.0%
GGATACTTATAAGGGACAAT+GGG - chr1.1:34947046-34947065 MS.gene073636:CDS 35.0%
TAAGACAATGAAGAAAGCTG+AGG - chr1.1:34948339-34948358 MS.gene073636:CDS 35.0%
TAGATGGGCAAGTATCAAAT+TGG - chr1.1:34949422-34949441 MS.gene073636:CDS 35.0%
TATTTCGACTACAACGATCT+TGG - chr1.1:34948865-34948884 MS.gene073636:CDS 35.0%
TCGAATGGAGATAAGTATGA+GGG - chr1.1:34947107-34947126 MS.gene073636:intron 35.0%
TCTAGTCCATACTTTCTCTT+TGG + chr1.1:34948005-34948024 None:intergenic 35.0%
TTCAAGAGTGGTTATATGGA+TGG - chr1.1:34946996-34947015 MS.gene073636:intron 35.0%
TTCAGATCTAAAGATGCTGA+GGG + chr1.1:34947965-34947984 None:intergenic 35.0%
TTCGAATGGAGATAAGTATG+AGG - chr1.1:34947106-34947125 MS.gene073636:intron 35.0%
TTTCAGATCTAAAGATGCTG+AGG + chr1.1:34947966-34947985 None:intergenic 35.0%
! AACTCAGTATACACTTGTTG+TGG + chr1.1:34947431-34947450 None:intergenic 35.0%
! ACTATTGCCCAGTAGTTTTT+AGG - chr1.1:34948086-34948105 MS.gene073636:CDS 35.0%
! AGTAATGGGAATAGGTATGA+TGG - chr1.1:34947245-34947264 MS.gene073636:CDS 35.0%
! ATCGTATTGAATGGACTTGT+AGG + chr1.1:34949607-34949626 None:intergenic 35.0%
! ATGGACTATAGTCTACTAGT+TGG - chr1.1:34949083-34949102 MS.gene073636:CDS 35.0%
! CAAATCAAAGCGTCTATGTA+TGG + chr1.1:34948757-34948776 None:intergenic 35.0%
! GCTCTAGTGACAAAGTTTTA+TGG - chr1.1:34948510-34948529 MS.gene073636:intron 35.0%
! GGGAATGGAACTTTTAAATG+GGG - chr1.1:34947293-34947312 MS.gene073636:CDS 35.0%
! GGTTCATTTGTTTGGAGTAA+TGG - chr1.1:34947230-34947249 MS.gene073636:CDS 35.0%
! TTCTAGGAATTTAACGAGGA+TGG + chr1.1:34949223-34949242 None:intergenic 35.0%
! TTGTTTGGAGTAATGGGAAT+AGG - chr1.1:34947237-34947256 MS.gene073636:CDS 35.0%
!! AATTTTAGGTGATTCAGAGG+GGG - chr1.1:34949260-34949279 MS.gene073636:CDS 35.0%
!! ACATAGACGCTTTGATTTGA+AGG - chr1.1:34948758-34948777 MS.gene073636:CDS 35.0%
!! CATAGACGCTTTGATTTGAA+GGG - chr1.1:34948759-34948778 MS.gene073636:CDS 35.0%
!! TCTTTGGAATCAAAAGCTGA+AGG + chr1.1:34947989-34948008 None:intergenic 35.0%
!!! ATCAAGATCTTTTAGGATGG+TGG + chr1.1:34948835-34948854 None:intergenic 35.0%
!!! GGTGATGGAAGTTTTTATGT+AGG - chr1.1:34947314-34947333 MS.gene073636:intron 35.0%
!!! GTTCTGAGGGAATTTTTAAG+AGG + chr1.1:34948184-34948203 None:intergenic 35.0%
ACAGTAGTATGATGAAGGCA+TGG - chr1.1:34946667-34946686 MS.gene073636:CDS 40.0%
ACCAAAGAAATCAAAGAGGC+AGG - chr1.1:34947769-34947788 MS.gene073636:intron 40.0%
ACCTCATAGTACTCTCCAAT+TGG + chr1.1:34949519-34949538 None:intergenic 40.0%
ACGTTGTATGATAGCTAGCT+AGG + chr1.1:34948948-34948967 None:intergenic 40.0%
ACTGGTAATAGAACTCCAAC+TGG - chr1.1:34947662-34947681 MS.gene073636:intron 40.0%
AGGCGTATATTTGGATCCTT+CGG + chr1.1:34948035-34948054 None:intergenic 40.0%
AGTGAGTATCAAGTTAGTCC+TGG - chr1.1:34947452-34947471 MS.gene073636:intron 40.0%
ATAGCTTCCTAAGAGTTCTG+AGG + chr1.1:34948198-34948217 None:intergenic 40.0%
ATATTGGGGAATGGAGGAAT+GGG - chr1.1:34947192-34947211 MS.gene073636:intron 40.0%
ATGTCTTCTCGTGAAATACG+GGG + chr1.1:34949294-34949313 None:intergenic 40.0%
CATGTCTTCTCGTGAAATAC+GGG + chr1.1:34949295-34949314 None:intergenic 40.0%
CCAAAGAAATCAAAGAGGCA+GGG - chr1.1:34947770-34947789 MS.gene073636:intron 40.0%
CCATGTCTTCTCGTGAAATA+CGG + chr1.1:34949296-34949315 None:intergenic 40.0%
GAAAAACTATGGGAAAGGGA+AGG - chr1.1:34946937-34946956 MS.gene073636:intron 40.0%
GAACATATTATCCTTCTCCC+GGG - chr1.1:34947369-34947388 MS.gene073636:intron 40.0%
GAAGGAATAAGATCTCCTTC+TGG + chr1.1:34949131-34949150 None:intergenic 40.0%
GAAGGAGATCTTATTCCTTC+AGG - chr1.1:34949131-34949150 MS.gene073636:CDS 40.0%
GAGATAAGTATGAGGGAGAA+TGG - chr1.1:34947114-34947133 MS.gene073636:intron 40.0%
GATAGAATGCATTTATGGGG+CGG - chr1.1:34947611-34947630 MS.gene073636:CDS 40.0%
GATGGTAATAGAACTCCAAC+TGG - chr1.1:34947644-34947663 MS.gene073636:intron 40.0%
GATTGTGAATTGCAACTCGT+AGG - chr1.1:34949489-34949508 MS.gene073636:CDS 40.0%
GATTTGAAGGGTTCTTCACT+TGG - chr1.1:34948771-34948790 MS.gene073636:CDS 40.0%
GGAACATATTATCCTTCTCC+CGG - chr1.1:34947368-34947387 MS.gene073636:intron 40.0%
GGAATAGGTATGATGGCTAT+TGG - chr1.1:34947252-34947271 MS.gene073636:CDS 40.0%
GGAGTTCAAGAGTGGTTATA+TGG - chr1.1:34946992-34947011 MS.gene073636:intron 40.0%
GGGATACTTATAAGGGACAA+TGG - chr1.1:34947045-34947064 MS.gene073636:CDS 40.0%
GGGGTAAAGGTTCATTTGTT+TGG - chr1.1:34947222-34947241 MS.gene073636:CDS 40.0%
GGTGCTTTCAAAGTTTGTCT+TGG + chr1.1:34947752-34947771 None:intergenic 40.0%
GTGAGTATCAAGTTAGTCCT+GGG - chr1.1:34947453-34947472 MS.gene073636:intron 40.0%
GTGCATACACTGCTACTAAT+GGG - chr1.1:34947024-34947043 MS.gene073636:intron 40.0%
GTTGGAGTTCTATTACCAGT+TGG + chr1.1:34947662-34947681 None:intergenic 40.0%
GTTTCAGTAATCTCTGACTC+AGG + chr1.1:34948813-34948832 None:intergenic 40.0%
TATATTGGGGAATGGAGGAA+TGG - chr1.1:34947191-34947210 MS.gene073636:intron 40.0%
TATGATGGCTATTGGGAAGA+TGG - chr1.1:34947260-34947279 MS.gene073636:CDS 40.0%
TATGTCGGAGAATGGTTCAA+AGG - chr1.1:34946915-34946934 MS.gene073636:CDS 40.0%
TATGTTCCACTCTGATCTCT+TGG + chr1.1:34947356-34947375 None:intergenic 40.0%
TCAGATCTAAAGATGCTGAG+GGG + chr1.1:34947964-34947983 None:intergenic 40.0%
TCTTAGGAAGCTATTCAAGG+TGG - chr1.1:34948204-34948223 MS.gene073636:intron 40.0%
TGAGGTTGGATCGTATTGAA+TGG + chr1.1:34949616-34949635 None:intergenic 40.0%
TGAGTATCAAGTTAGTCCTG+GGG - chr1.1:34947454-34947473 MS.gene073636:intron 40.0%
TGCATACACTGCTACTAATG+GGG - chr1.1:34947025-34947044 MS.gene073636:intron 40.0%
TGCTAATAATGTGTGTGCCT+TGG + chr1.1:34948400-34948419 None:intergenic 40.0%
TTCCATTTGAACTCACTGGA+CGG + chr1.1:34948064-34948083 None:intergenic 40.0%
TTGATCCAAGACAATACTCG+AGG - chr1.1:34949646-34949665 MS.gene073636:CDS 40.0%
! AAGAAGTATACCATGCAGAG+AGG - chr1.1:34946802-34946821 MS.gene073636:CDS 40.0%
! AGAAGTATACCATGCAGAGA+GGG - chr1.1:34946803-34946822 MS.gene073636:CDS 40.0%
! CAGTAGTATGATGAAGGCAT+GGG - chr1.1:34946668-34946687 MS.gene073636:CDS 40.0%
! CGAGTATTGTCTTGGATCAA+CGG + chr1.1:34949646-34949665 None:intergenic 40.0%
! GGAACTTTTAAATGGGGTGA+TGG - chr1.1:34947299-34947318 MS.gene073636:CDS 40.0%
! TAGCTTCCTAAGAGTTCTGA+GGG + chr1.1:34948197-34948216 None:intergenic 40.0%
! TTTTCGAAAGACATGTGACC+TGG + chr1.1:34949340-34949359 None:intergenic 40.0%
!! AATGGAGGAATGGGAGTATT+TGG - chr1.1:34947201-34947220 MS.gene073636:CDS 40.0%
!! AATGGGAGTATTTGGGGTAA+AGG - chr1.1:34947209-34947228 MS.gene073636:CDS 40.0%
!! ACCAATTGGAGAGTACTATG+AGG - chr1.1:34949515-34949534 MS.gene073636:CDS 40.0%
!! AGGTACACCTTTTTCTGAGA+AGG + chr1.1:34948561-34948580 None:intergenic 40.0%
!! ATGGAGGAATGGGAGTATTT+GGG - chr1.1:34947202-34947221 MS.gene073636:CDS 40.0%
!!! AAGAAGCTTCCACTTTTTCC+AGG + chr1.1:34948289-34948308 None:intergenic 40.0%
AAAACTGAAACCTTCTCCCC+AGG + chr1.1:34947473-34947492 None:intergenic 45.0%
AACTTCTGCTAGATCCTTCC+AGG - chr1.1:34949319-34949338 MS.gene073636:CDS 45.0%
AAGGATCCAAGAGATCAGAG+TGG - chr1.1:34947347-34947366 MS.gene073636:intron 45.0%
ACTGCAAGTCTCTTCTGTGA+TGG + chr1.1:34947497-34947516 None:intergenic 45.0%
AGAAGAATGTCAGTGGATGC+AGG - chr1.1:34947557-34947576 MS.gene073636:CDS 45.0%
AGTATGAGGGAGAATGGAGA+AGG - chr1.1:34947120-34947139 MS.gene073636:intron 45.0%
AGTGGAGTATGAGATCCTGA+AGG + chr1.1:34949149-34949168 None:intergenic 45.0%
ATCCGTCCAGTGAGTTCAAA+TGG - chr1.1:34948059-34948078 MS.gene073636:CDS 45.0%
ATGATCACAGGCAAATCGAC+AGG - chr1.1:34949030-34949049 MS.gene073636:CDS 45.0%
ATGGACAAGGGAGATATGAG+TGG - chr1.1:34947153-34947172 MS.gene073636:intron 45.0%
CAACTCGTAGGAGAACCAAT+TGG - chr1.1:34949501-34949520 MS.gene073636:CDS 45.0%
CAGATCTAAAGATGCTGAGG+GGG + chr1.1:34947963-34947982 None:intergenic 45.0%
CCGTATTTCACGAGAAGACA+TGG - chr1.1:34949293-34949312 MS.gene073636:CDS 45.0%
CTTCAGGACCAGCTTATGAA+GGG - chr1.1:34946970-34946989 MS.gene073636:intron 45.0%
CTTTCTTCGCCTGGAAAAAG+TGG - chr1.1:34948277-34948296 MS.gene073636:CDS 45.0%
GAAGAATGTCAGTGGATGCA+GGG - chr1.1:34947558-34947577 MS.gene073636:CDS 45.0%
GCAAGAGGGTCATCTTGATT+GGG - chr1.1:34947403-34947422 MS.gene073636:intron 45.0%
GCATCCACTGACATTCTTCT+CGG + chr1.1:34947557-34947576 None:intergenic 45.0%
GGATCTCATACTCCACTTGA+TGG - chr1.1:34949152-34949171 MS.gene073636:CDS 45.0%
GGCGTATATTTGGATCCTTC+GGG + chr1.1:34948034-34948053 None:intergenic 45.0%
GGTGAGACGAGTTATTCGAA+TGG - chr1.1:34947092-34947111 MS.gene073636:intron 45.0%
GGTGCATACACTGCTACTAA+TGG - chr1.1:34947023-34947042 MS.gene073636:intron 45.0%
GTATATTTGGATCCTTCGGG+AGG + chr1.1:34948031-34948050 None:intergenic 45.0%
GTATGAGGGAGAATGGAGAA+GGG - chr1.1:34947121-34947140 MS.gene073636:intron 45.0%
GTCCAGTGAGTTCAAATGGA+AGG - chr1.1:34948063-34948082 MS.gene073636:CDS 45.0%
GTCCTTCCATTTGAACTCAC+TGG + chr1.1:34948068-34948087 None:intergenic 45.0%
GTTGGAGTTCTACTACCAGT+TGG + chr1.1:34947680-34947699 None:intergenic 45.0%
TAAGCCGAGAAGAATGTCAG+TGG - chr1.1:34947550-34947569 MS.gene073636:CDS 45.0%
TATGAAGGGGAGTTCAAGAG+TGG - chr1.1:34946984-34947003 MS.gene073636:intron 45.0%
TATGAGGGAGAATGGAGAAG+GGG - chr1.1:34947122-34947141 MS.gene073636:intron 45.0%
TCAACGGCTGATATTGAGGT+TGG + chr1.1:34949630-34949649 None:intergenic 45.0%
TGATCACAGGCAAATCGACA+GGG - chr1.1:34949031-34949050 MS.gene073636:CDS 45.0%
TGGATCAACGGCTGATATTG+AGG + chr1.1:34949634-34949653 None:intergenic 45.0%
TTCAGGACCAGCTTATGAAG+GGG - chr1.1:34946971-34946990 MS.gene073636:intron 45.0%
TTGAACTCCCCTTCATAAGC+TGG + chr1.1:34946981-34947000 None:intergenic 45.0%
! AAACGCCTCGAGTATTGTCT+TGG + chr1.1:34949654-34949673 None:intergenic 45.0%
! CCCTGCCTCTTTGATTTCTT+TGG + chr1.1:34947773-34947792 None:intergenic 45.0%
! GATGGTTTGCCTAAAGGGAA+TGG - chr1.1:34947278-34947297 MS.gene073636:CDS 45.0%
! GGGAAGATGGTTTGCCTAAA+GGG - chr1.1:34947273-34947292 MS.gene073636:CDS 45.0%
! TAGTATGATGAAGGCATGGG+AGG - chr1.1:34946671-34946690 MS.gene073636:CDS 45.0%
! TCTGGAACAGGAGGGAATTA+TGG - chr1.1:34949064-34949083 MS.gene073636:CDS 45.0%
! TGGGAAGATGGTTTGCCTAA+AGG - chr1.1:34947272-34947291 MS.gene073636:CDS 45.0%
!! ACGGGAAAGGGAAGTACTTA+TGG - chr1.1:34946877-34946896 MS.gene073636:CDS 45.0%
!! GGGAAGTACTTATGGACAGA+TGG - chr1.1:34946885-34946904 MS.gene073636:CDS 45.0%
!! TGGAGGAATGGGAGTATTTG+GGG - chr1.1:34947203-34947222 MS.gene073636:CDS 45.0%
!! ATTCATATTTATAAAATTTA+TGG - chr1.1:34948681-34948700 MS.gene073636:CDS 5.0%
!! CTTAATAATAAAAATTAATA+AGG + chr1.1:34948120-34948139 None:intergenic 5.0%
AAGTACTTCCCTTTCCCGTG+CGG + chr1.1:34946876-34946895 None:intergenic 50.0%
AATGTCAGTGGATGCAGGGA+GGG - chr1.1:34947562-34947581 MS.gene073636:CDS 50.0%
AGAAGAGACTTGCAGTGTGG+AGG - chr1.1:34947501-34947520 MS.gene073636:CDS 50.0%
AGAATGCATTTATGGGGCGG+CGG - chr1.1:34947614-34947633 MS.gene073636:CDS 50.0%
AGAATGGAGAAGGGGTTTGC+AGG - chr1.1:34947130-34947149 MS.gene073636:intron 50.0%
AGGCGAAGAAAGTTCACGCA+GGG + chr1.1:34948269-34948288 None:intergenic 50.0%
ATAACTTCCCGCACGGGAAA+GGG - chr1.1:34946865-34946884 MS.gene073636:CDS 50.0%
CACAGAAGAGACTTGCAGTG+TGG - chr1.1:34947498-34947517 MS.gene073636:CDS 50.0%
CAGGGAGAGACCATATGCAA+AGG - chr1.1:34947788-34947807 MS.gene073636:intron 50.0%
CCTTCAGGACCAGCTTATGA+AGG - chr1.1:34946969-34946988 MS.gene073636:intron 50.0%
CCTTCATAAGCTGGTCCTGA+AGG + chr1.1:34946972-34946991 None:intergenic 50.0%
CGAAAGACATGTGACCTGGA+AGG + chr1.1:34949336-34949355 None:intergenic 50.0%
CGCAAGAGGGTCATCTTGAT+TGG - chr1.1:34947402-34947421 MS.gene073636:intron 50.0%
GCAGAGAGGGTTCTACCTAA+TGG - chr1.1:34946816-34946835 MS.gene073636:CDS 50.0%
TAGGTAGAACCCTCTCTGCA+TGG + chr1.1:34946815-34946834 None:intergenic 50.0%
TCAAGTTAGTCCTGGGGAGA+AGG - chr1.1:34947460-34947479 MS.gene073636:intron 50.0%
TGGGAAAGGGAAGGTTCACT+TGG - chr1.1:34946946-34946965 MS.gene073636:intron 50.0%
TGGGAGTGAATATGCCAGCA+CGG - chr1.1:34949442-34949461 MS.gene073636:CDS 50.0%
TTAGGTGATTCAGAGGGGGA+AGG - chr1.1:34949264-34949283 MS.gene073636:CDS 50.0%
TTGAACTCACTGGACGGATG+TGG + chr1.1:34948058-34948077 None:intergenic 50.0%
! ATATGCCAGCACGGGTTGAA+AGG - chr1.1:34949451-34949470 MS.gene073636:CDS 50.0%
! CGGATGTGGAGGCGTATATT+TGG + chr1.1:34948044-34948063 None:intergenic 50.0%
! TGGACTAGATTTCCTCCCGA+AGG - chr1.1:34948016-34948035 MS.gene073636:CDS 50.0%
!! TGGGTTGATAACTTCCCGCA+CGG - chr1.1:34946858-34946877 MS.gene073636:CDS 50.0%
!! TGTGAGCTTCTGGAACAGGA+GGG - chr1.1:34949056-34949075 MS.gene073636:CDS 50.0%
AACTCACTGGACGGATGTGG+AGG + chr1.1:34948055-34948074 None:intergenic 55.0%
AATGCATTTATGGGGCGGCG+GGG - chr1.1:34947616-34947635 MS.gene073636:CDS 55.0%
ACTGTCCTTTCAACCCGTGC+TGG + chr1.1:34949459-34949478 None:intergenic 55.0%
AGGGGTTTGCAGGATGGACA+AGG - chr1.1:34947140-34947159 MS.gene073636:intron 55.0%
AGTACTTCCCTTTCCCGTGC+GGG + chr1.1:34946875-34946894 None:intergenic 55.0%
AGTGTGGAGGTCTACCAAGG+GGG - chr1.1:34947514-34947533 MS.gene073636:CDS 55.0%
ATGCAGGGAGGGCAAGTGTA+GGG - chr1.1:34947573-34947592 MS.gene073636:CDS 55.0%
CAGGCGAAGAAAGTTCACGC+AGG + chr1.1:34948270-34948289 None:intergenic 55.0%
CAGTGTGGAGGTCTACCAAG+GGG - chr1.1:34947513-34947532 MS.gene073636:CDS 55.0%
CTCTTGCGATTGCGATGACC+CGG + chr1.1:34947390-34947409 None:intergenic 55.0%
CTGCGTGAACTTTCTTCGCC+TGG - chr1.1:34948268-34948287 MS.gene073636:CDS 55.0%
GAATGCATTTATGGGGCGGC+GGG - chr1.1:34947615-34947634 MS.gene073636:CDS 55.0%
GAATGTCAGTGGATGCAGGG+AGG - chr1.1:34947561-34947580 MS.gene073636:CDS 55.0%
GATAACTTCCCGCACGGGAA+AGG - chr1.1:34946864-34946883 MS.gene073636:CDS 55.0%
GCAGTGTGGAGGTCTACCAA+GGG - chr1.1:34947512-34947531 MS.gene073636:CDS 55.0%
GGGAGTGAATATGCCAGCAC+GGG - chr1.1:34949443-34949462 MS.gene073636:CDS 55.0%
GGGGTTTGCAGGATGGACAA+GGG - chr1.1:34947141-34947160 MS.gene073636:intron 55.0%
GGGTCATCGCAATCGCAAGA+GGG - chr1.1:34947389-34947408 MS.gene073636:intron 55.0%
TCTAAAGATGCTGAGGGGGC+AGG + chr1.1:34947959-34947978 None:intergenic 55.0%
TCTTGCGATTGCGATGACCC+GGG + chr1.1:34947389-34947408 None:intergenic 55.0%
TGCAGTGTGGAGGTCTACCA+AGG - chr1.1:34947511-34947530 MS.gene073636:CDS 55.0%
TGCCTGTGTCTTCTTCACCG+TGG + chr1.1:34946697-34946716 None:intergenic 55.0%
TGGAGAAGGGGTTTGCAGGA+TGG - chr1.1:34947134-34947153 MS.gene073636:intron 55.0%
! GGAAGGTTCACTTGGCCTTC+AGG - chr1.1:34946954-34946973 MS.gene073636:intron 55.0%
!! CTGTGAGCTTCTGGAACAGG+AGG - chr1.1:34949055-34949074 MS.gene073636:CDS 55.0%
!! GGACTGTGAGCTTCTGGAAC+AGG - chr1.1:34949052-34949071 MS.gene073636:CDS 55.0%
!! GGGTTGATAACTTCCCGCAC+GGG - chr1.1:34946859-34946878 MS.gene073636:CDS 55.0%
AGCACTACCACCATCCCCCT+TGG + chr1.1:34947531-34947550 None:intergenic 60.0%
AGGTCTACCAAGGGGGATGG+TGG - chr1.1:34947521-34947540 MS.gene073636:CDS 60.0%
CGACAGGGACTGTGAGCTTC+TGG - chr1.1:34949046-34949065 MS.gene073636:CDS 60.0%
CGGGTCATCGCAATCGCAAG+AGG - chr1.1:34947388-34947407 MS.gene073636:intron 60.0%
GATGCAGGGAGGGCAAGTGT+AGG - chr1.1:34947572-34947591 MS.gene073636:CDS 60.0%
GATTGCGATGACCCGGGAGA+AGG + chr1.1:34947383-34947402 None:intergenic 60.0%
GGCCACGGTGAAGAAGACAC+AGG - chr1.1:34946692-34946711 MS.gene073636:CDS 60.0%
TGGAGGTCTACCAAGGGGGA+TGG - chr1.1:34947518-34947537 MS.gene073636:CDS 60.0%
! GATGAAGGCATGGGAGGCCA+CGG - chr1.1:34946677-34946696 MS.gene073636:CDS 60.0%
CATTTATGGGGCGGCGGGGA+AGG - chr1.1:34947620-34947639 MS.gene073636:CDS 65.0%
TGGGGCGGCGGGGAAGGTGA+TGG - chr1.1:34947626-34947645 MS.gene073636:CDS 75.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 34946654 34949713 34946654 ID=MS.gene073636
chr1.1 mRNA 34946654 34949713 34946654 ID=MS.gene073636.t1;Parent=MS.gene073636
chr1.1 exon 34948512 34949713 34948512 ID=MS.gene073636.t1.exon1;Parent=MS.gene073636.t1
chr1.1 CDS 34948512 34949713 34948512 ID=cds.MS.gene073636.t1;Parent=MS.gene073636.t1
chr1.1 exon 34948260 34948427 34948260 ID=MS.gene073636.t1.exon2;Parent=MS.gene073636.t1
chr1.1 CDS 34948260 34948427 34948260 ID=cds.MS.gene073636.t1;Parent=MS.gene073636.t1
chr1.1 exon 34948001 34948166 34948001 ID=MS.gene073636.t1.exon3;Parent=MS.gene073636.t1
chr1.1 CDS 34948001 34948166 34948001 ID=cds.MS.gene073636.t1;Parent=MS.gene073636.t1
chr1.1 exon 34947795 34947911 34947795 ID=MS.gene073636.t1.exon4;Parent=MS.gene073636.t1
chr1.1 CDS 34947795 34947911 34947795 ID=cds.MS.gene073636.t1;Parent=MS.gene073636.t1
chr1.1 exon 34947463 34947656 34947463 ID=MS.gene073636.t1.exon5;Parent=MS.gene073636.t1
chr1.1 CDS 34947463 34947656 34947463 ID=cds.MS.gene073636.t1;Parent=MS.gene073636.t1
chr1.1 exon 34947194 34947327 34947194 ID=MS.gene073636.t1.exon6;Parent=MS.gene073636.t1
chr1.1 CDS 34947194 34947327 34947194 ID=cds.MS.gene073636.t1;Parent=MS.gene073636.t1
chr1.1 exon 34947027 34947099 34947027 ID=MS.gene073636.t1.exon7;Parent=MS.gene073636.t1
chr1.1 CDS 34947027 34947099 34947027 ID=cds.MS.gene073636.t1;Parent=MS.gene073636.t1
chr1.1 exon 34946654 34946942 34946654 ID=MS.gene073636.t1.exon8;Parent=MS.gene073636.t1
chr1.1 CDS 34946654 34946942 34946654 ID=cds.MS.gene073636.t1;Parent=MS.gene073636.t1
Gene Sequence

>MS.gene073636

ATGATGGGTAAAGACAGTAGTATGATGAAGGCATGGGAGGCCACGGTGAAGAAGACACAGGCAGTTGCGAAGAAGCGTGCAAATAGCATATTTGGATCAACATATGTAGCTTCACAACATGGAGATCATGAAGAAGAAAGCAAGGATGAAGAAGTATACCATGCAGAGAGGGTTCTACCTAATGGAGATTACTATAAAGGAGAATGGGTTGATAACTTCCCGCACGGGAAAGGGAAGTACTTATGGACAGATGGATGTATATATGTCGGAGAATGGTTCAAAGGAAAAACTATGGGAAAGGGAAGGTTCACTTGGCCTTCAGGACCAGCTTATGAAGGGGAGTTCAAGAGTGGTTATATGGATGGAATAGGTGCATACACTGCTACTAATGGGGATACTTATAAGGGACAATGGGTAATGAATTTGAAACATGGTCATGGTGAGACGAGTTATTCGAATGGAGATAAGTATGAGGGAGAATGGAGAAGGGGTTTGCAGGATGGACAAGGGAGATATGAGTGGAAAGATGAGAACTATTATATTGGGGAATGGAGGAATGGGAGTATTTGGGGTAAAGGTTCATTTGTTTGGAGTAATGGGAATAGGTATGATGGCTATTGGGAAGATGGTTTGCCTAAAGGGAATGGAACTTTTAAATGGGGTGATGGAAGTTTTTATGTAGGTAATTGGAGTAAGGATCCAAGAGATCAGAGTGGAACATATTATCCTTCTCCCGGGTCATCGCAATCGCAAGAGGGTCATCTTGATTGGGAACCACAACAAGTGTATACTGAGTTGAGTGAGTATCAAGTTAGTCCTGGGGAGAAGGTTTCAGTTTTGCCATCACAGAAGAGACTTGCAGTGTGGAGGTCTACCAAGGGGGATGGTGGTAGTGCTAAGCCGAGAAGAATGTCAGTGGATGCAGGGAGGGCAAGTGTAGGGCTTGAAAAACCAAGTGATAGAATGCATTTATGGGGCGGCGGGGAAGGTGATGGTAATAGAACTCCAACTGGTAATAGAACTCCAACTGGTAGTAGAACTCCAACTAAAGATGATCATGAGTTGCTTGGTTTACATTTACATGCTTCTAATAATCCAAGACAAACTTTGAAAGCACCAAAGAAATCAAAGAGGCAGGGAGAGACCATATGCAAAGGACACAAGAATTATGAGCTCATGCTCAATTTACAATTGGGAATCAGGTAACGTAATTTTTTTTAAGAAACAAAAACAAACAATGTAGCGTTTTTATTCATGATAATTGTTTGAGTTGTTGCATATAATAGGCATTCTGTTGGAAGACCTGCCCCCTCAGCATCTTTAGATCTGAAACCTTCAGCTTTTGATTCCAAAGAGAAAGTATGGACTAGATTTCCTCCCGAAGGATCCAAATATACGCCTCCACATCCGTCCAGTGAGTTCAAATGGAAGGACTATTGCCCAGTAGTTTTTAGGTAGTTAATCCTTATTAATTTTTATTATTAAGTTCCCTTTTGCATATTATAATTGATCAACATATAAATTTTACCTCTTAAAAATTCCCTCAGAACTCTTAGGAAGCTATTCAAGGTGGATGCAGCTGATTACATGTTATCTATATGTGGAAATGATGCCCTGCGTGAACTTTCTTCGCCTGGAAAAAGTGGAAGCTTCTTTTACTTGACCAATGATGACCGTTATATGATTAAGACAATGAAGAAAGCTGAGGCTAAAGTGAGTTTCATACTAATTTTCTTATCGAAACCAAGGCACACACATTATTAGCATAATATTGATTTGGACATGCTGATTTTATTTTGCAGGCTCTCTTGAGAATGCTTCCCGCTTATTACAATCATTTTCGAGCATTTGAAAATGCTCTAGTGACAAAGTTTTATGGTTTACATTGTGTCAAGTTAAATGGACCTTCTCAGAAAAAGGTGTACCTAAATGTTGTAGACGATTTTTATTGTTTAAAAAAATTTAAGCATTTACTAGTATCTATCCTTATAGGAAAGCATACATTTCTAGTAAGAGAGAACTAAGAAATTCATATTTATAAAATTTATGGATTTCAGGTACGATTTATCATAATGGGCAACCTTTTTTGTTCTGAGTATACCATACATAGACGCTTTGATTTGAAGGGTTCTTCACTTGGGCGCATAACGACTAAGCCTGAGTCAGAGATTACTGAAACCACCATCCTAAAAGATCTTGATCTAAATTTTATATTTCGACTACAACGATCTTGGTTTTTAGAATTTTGCAGGTGATAAAAGTTAAATATATTATAGCAAATTTTAATGTGACCTAGCTAGCTATCATACAACGTATTTCTATTTTTACCTTCTTGAAAAGAATAAGAAATTGAACCATATCATGTGTTTGTTATATATGATCACAGGCAAATCGACAGGGACTGTGAGCTTCTGGAACAGGAGGGAATTATGGACTATAGTCTACTAGTTGGCATTCATTTCAAAGATATATCACCAGAAGGAGATCTTATTCCTTCAGGATCTCATACTCCACTTGATGGTATTTTTCTTATCCGTAATAGTATATATCTTGTCTTAATTTTTGTCCATCCTCGTTAAATTCCTAGAAAAATAATTTGGATGTTAAATTTTAGGTGATTCAGAGGGGGAAGGAACGCCCCGTATTTCACGAGAAGACATGGATCAACTTCTGCTAGATCCTTCCAGGTCACATGTCTTTCGAAAATTTTAATATAGAATCAATGTTTATGAGATAAATTCTTAAAACAATTATTGTATATTTGTTTGTAGATGGGCAAGTATCAAATTGGGAGTGAATATGCCAGCACGGGTTGAAAGGACAGTGAGAACAAGTGATTGTGAATTGCAACTCGTAGGAGAACCAATTGGAGAGTACTATGAGGTTGTCTTGTTTTTCGGTATCATTGACATACTTCAAGACTATGATATCAGTAAGAAGCTTGAGCATGCCTACAAGTCCATTCAATACGATCCAACCTCAATATCAGCCGTTGATCCAAGACAATACTCGAGGCGTTTTCGTGACTTCATATTCAAAATATTTTCACAAGATTCTTGA
Protein sequence

>MS.gene073636.t1

MMGKDSSMMKAWEATVKKTQAVAKKRANSIFGSTYVASQHGDHEEESKDEEVYHAERVLPNGDYYKGEWVDNFPHGKGKYLWTDGCIYVGEWFKGKTMGKGRFTWPSGPAYEGEFKSGYMDGIGAYTATNGDTYKGQWVMNLKHGHGETSYSNGDKYEGEWRRGLQDGQGRYEWKDENYYIGEWRNGSIWGKGSFVWSNGNRYDGYWEDGLPKGNGTFKWGDGSFYVGNWSKDPRDQSGTYYPSPGSSQSQEGHLDWEPQQVYTELSEYQVSPGEKVSVLPSQKRLAVWRSTKGDGGSAKPRRMSVDAGRASVGLEKPSDRMHLWGGGEGDGNRTPTGNRTPTGSRTPTKDDHELLGLHLHASNNPRQTLKAPKKSKRQGETICKGHKNYELMLNLQLGIRHSVGRPAPSASLDLKPSAFDSKEKVWTRFPPEGSKYTPPHPSSEFKWKDYCPVVFRTLRKLFKVDAADYMLSICGNDALRELSSPGKSGSFFYLTNDDRYMIKTMKKAEAKALLRMLPAYYNHFRAFENALVTKFYGLHCVKLNGPSQKKVRFIIMGNLFCSEYTIHRRFDLKGSSLGRITTKPESEITETTILKDLDLNFIFRLQRSWFLEFCRQIDRDCELLEQEGIMDYSLLVGIHFKDISPEGDLIPSGSHTPLDGDSEGEGTPRISREDMDQLLLDPSRWASIKLGVNMPARVERTVRTSDCELQLVGEPIGEYYEVVLFFGIIDILQDYDISKKLEHAYKSIQYDPTSISAVDPRQYSRRFRDFIFKIFSQDS