AlfalfaGEDB | MS.gene07378

M. sativa cultivar XinJiangDaYe / MS.gene07378

KEGG: K09422
GO: GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0097159 GO:1901363
PFAM: PF00249.34

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene07378.t1	XP_013469134.1	82.7	388	9	2	1	330	1	388	6.70E-175	623.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene07378.t1	Q8VZQ2	28.8	416	155	12	1	328	1	363	6.6e-30	132.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene07378.t1	A0A072VMV6	82.7	388	9	2	1	330	1	388	4.8e-175	623.2

TFs/TRs:

Gene ID	Type	Classification
MS.gene07378.t1	TF	MYB-related

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049850	MS.gene07378	0.800066	1.72E-48	-1.69E-46
MS.gene050807	MS.gene07378	0.841896	3.60E-58	-1.69E-46
MS.gene050808	MS.gene07378	0.824399	8.24E-54	-1.69E-46
MS.gene051247	MS.gene07378	0.820928	5.29E-53	-1.69E-46
MS.gene051265	MS.gene07378	0.820862	5.48E-53	-1.69E-46
MS.gene05157	MS.gene07378	0.811847	5.70E-51	-1.69E-46
MS.gene051719	MS.gene07378	0.827675	1.37E-54	-1.69E-46
MS.gene051720	MS.gene07378	0.833243	5.96E-56	-1.69E-46
MS.gene051744	MS.gene07378	0.814254	1.69E-51	-1.69E-46
MS.gene052020	MS.gene07378	0.805645	1.21E-49	-1.69E-46
MS.gene052665	MS.gene07378	0.819987	8.70E-53	-1.69E-46
MS.gene055465	MS.gene07378	0.805429	1.34E-49	-1.69E-46
MS.gene055466	MS.gene07378	0.817118	3.89E-52	-1.69E-46
MS.gene055537	MS.gene07378	0.81984	9.40E-53	-1.69E-46
MS.gene055778	MS.gene07378	0.800228	1.59E-48	-1.69E-46
MS.gene056366	MS.gene07378	0.803358	3.62E-49	-1.69E-46
MS.gene058168	MS.gene07378	0.824406	8.21E-54	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene07378.t1	MTR_1g085640	80.670	388	17	3	1	330	1	388	0.0	618
MS.gene07378.t1	MTR_7g110830	46.939	392	93	18	1	311	1	358	3.20e-85	261
MS.gene07378.t1	MTR_1g085040	32.090	402	163	15	1	328	1	366	7.65e-31	120
MS.gene07378.t1	MTR_4g105130	42.748	131	18	3	1	74	1	131	1.73e-21	94.0
MS.gene07378.t1	MTR_3g077110	49.425	87	37	3	12	94	65	148	3.83e-17	81.6
MS.gene07378.t1	MTR_1g112760	55.385	65	25	1	12	72	66	130	5.29e-17	79.3
MS.gene07378.t1	MTR_7g076740	52.174	69	27	2	12	75	66	133	1.12e-15	76.6
MS.gene07378.t1	MTR_7g111290	42.446	139	23	3	1	82	1	139	1.65e-15	77.0
MS.gene07378.t1	MTR_4g073420	50.000	68	30	1	12	75	65	132	1.73e-15	75.9
MS.gene07378.t1	MTR_2g064160	34.615	130	27	3	1	73	1	129	2.66e-15	75.9
MS.gene07378.t1	MTR_2g089620	52.239	67	28	1	9	71	62	128	2.99e-15	75.9
MS.gene07378.t1	MTR_8g031360	55.224	67	24	2	12	73	67	132	3.77e-15	75.1
MS.gene07378.t1	MTR_6g009430	31.818	132	33	2	1	75	1	132	7.26e-15	74.7
MS.gene07378.t1	MTR_4g091490	53.125	64	26	1	12	71	66	129	7.40e-15	75.1
MS.gene07378.t1	MTR_2g011660	53.125	64	26	1	12	71	66	129	8.84e-15	74.7
MS.gene07378.t1	MTR_8g095390	52.941	68	28	2	12	75	65	132	9.82e-15	74.3
MS.gene07378.t1	MTR_3g045430	59.016	61	22	1	18	75	73	133	1.11e-14	73.9
MS.gene07378.t1	MTR_5g007370	50.746	67	29	1	12	74	65	131	2.13e-14	72.8
MS.gene07378.t1	MTR_4g478180	53.125	64	26	2	12	71	66	129	2.17e-14	73.6
MS.gene07378.t1	MTR_5g078140	53.731	67	25	2	12	73	65	130	3.11e-14	72.8
MS.gene07378.t1	MTR_3g074520	50.725	69	28	2	12	75	65	132	3.11e-14	72.8
MS.gene07378.t1	MTR_3g461490	51.471	68	29	1	12	75	65	132	3.69e-14	72.4
MS.gene07378.t1	MTR_7g111290	56.410	78	30	2	9	82	20	97	8.03e-14	71.6
MS.gene07378.t1	MTR_7g011170	52.239	67	28	2	12	74	65	131	9.79e-14	71.2
MS.gene07378.t1	MTR_3g065440	55.224	67	24	2	12	73	65	130	1.01e-13	71.2
MS.gene07378.t1	MTR_3g083540	50.000	68	30	2	9	72	91	158	1.08e-13	70.9
MS.gene07378.t1	MTR_4g102380	49.254	67	30	1	12	74	65	131	1.41e-13	70.1
MS.gene07378.t1	MTR_4g082290	54.688	64	25	2	12	71	65	128	1.67e-13	71.2
MS.gene07378.t1	MTR_4g082230	54.688	64	25	2	12	71	65	128	1.69e-13	71.2
MS.gene07378.t1	MTR_5g029840	47.761	67	31	1	12	74	65	131	3.61e-13	69.7
MS.gene07378.t1	MTR_5g042030	56.061	66	25	2	12	73	60	125	4.54e-13	68.9
MS.gene07378.t1	MTR_4g065017	54.386	57	20	2	9	60	67	122	1.12e-12	68.2
MS.gene07378.t1	MTR_3g097450	46.269	67	32	1	12	74	65	131	1.59e-12	67.4
MS.gene07378.t1	MTR_6g012690	51.562	64	27	2	12	71	65	128	1.85e-12	67.8
MS.gene07378.t1	MTR_3g028740	55.357	56	21	1	9	60	72	127	4.23e-12	66.6
MS.gene07378.t1	MTR_8g098860	32.203	118	23	2	1	61	1	118	1.40e-11	64.7
MS.gene07378.t1	MTR_2g097910	54.717	53	20	1	12	60	73	125	3.57e-11	63.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene07378.t1	AT4G01680	48.026	152	21	3	1	95	1	151	4.15e-33	125
MS.gene07378.t1	AT1G09540	26.619	417	163	14	1	328	1	363	7.62e-27	108
MS.gene07378.t1	AT4G01680	42.105	152	30	4	1	95	1	151	5.62e-25	101
MS.gene07378.t1	AT1G57560	29.758	289	134	9	1	221	1	288	1.53e-24	101
MS.gene07378.t1	AT4G01680	56.818	88	33	3	12	95	77	163	4.59e-22	95.5
MS.gene07378.t1	AT4G01680	76.744	43	5	1	1	38	1	43	3.87e-14	72.8
MS.gene07378.t1	AT1G57560	42.105	133	20	3	1	76	1	133	5.70e-22	94.0
MS.gene07378.t1	AT5G26660	41.860	129	18	3	1	72	1	129	1.06e-21	94.7
MS.gene07378.t1	AT5G26660	61.538	65	21	2	12	72	34	98	2.89e-19	87.4
MS.gene07378.t1	AT5G60890	52.703	74	31	2	12	81	65	138	1.58e-17	82.0
MS.gene07378.t1	AT5G16600	52.564	78	33	1	12	85	65	142	2.50e-17	82.0
MS.gene07378.t1	AT1G66230	51.250	80	35	1	12	87	65	144	1.04e-16	79.3
MS.gene07378.t1	AT1G74430	51.562	64	27	1	12	71	65	128	1.61e-16	78.6
MS.gene07378.t1	AT5G10280	48.052	77	36	1	3	75	56	132	2.61e-16	79.0
MS.gene07378.t1	AT1G74430	72.093	43	12	0	29	71	17	59	4.30e-16	76.3
MS.gene07378.t1	AT5G61420	53.425	73	30	2	9	77	62	134	7.66e-16	77.8
MS.gene07378.t1	AT4G28110	47.619	84	30	2	2	71	45	128	2.73e-15	75.5
MS.gene07378.t1	AT3G61250	36.434	129	25	2	1	72	1	129	3.05e-15	75.5
MS.gene07378.t1	AT4G05100	54.688	64	25	1	12	71	66	129	3.73e-15	75.5
MS.gene07378.t1	AT5G61420	70.213	47	14	0	31	77	9	55	4.25e-15	74.7
MS.gene07378.t1	AT4G21440	53.125	64	26	1	12	71	65	128	4.26e-15	75.5
MS.gene07378.t1	AT5G07700	41.525	118	50	4	9	107	62	179	6.82e-15	74.7
MS.gene07378.t1	AT5G07700	41.525	118	50	4	9	107	62	179	6.82e-15	74.7
MS.gene07378.t1	AT5G65230	48.684	76	35	2	3	74	56	131	9.46e-15	74.3
MS.gene07378.t1	AT1G18710	48.529	68	31	2	9	72	62	129	1.05e-14	73.6
MS.gene07378.t1	AT1G18570	51.515	66	28	1	12	73	66	131	1.39e-14	73.9
MS.gene07378.t1	AT4G28110	70.732	41	12	0	31	71	4	44	1.49e-14	71.6
MS.gene07378.t1	AT4G34990	50.746	67	29	1	12	74	65	131	2.19e-14	72.8
MS.gene07378.t1	AT5G07690	51.282	78	34	2	9	82	62	139	2.34e-14	73.2
MS.gene07378.t1	AT1G34670	50.000	72	30	2	9	75	62	132	2.53e-14	73.6
MS.gene07378.t1	AT3G12720	33.333	126	26	3	1	69	12	136	2.55e-14	72.8
MS.gene07378.t1	AT5G15310	64.000	50	18	0	25	74	3	52	2.83e-14	72.0
MS.gene07378.t1	AT4G17785	52.239	67	28	2	9	71	63	129	3.11e-14	73.2
MS.gene07378.t1	AT3G13540	57.143	63	24	1	13	72	78	140	3.23e-14	71.6
MS.gene07378.t1	AT4G17785	52.239	67	28	2	9	71	63	129	3.58e-14	72.8
MS.gene07378.t1	AT5G16770	49.254	67	30	1	12	74	65	131	5.08e-14	72.4
MS.gene07378.t1	AT5G16770	49.254	67	30	1	12	74	65	131	5.08e-14	72.4
MS.gene07378.t1	AT5G56110	68.889	45	14	0	31	75	88	132	5.96e-14	72.0
MS.gene07378.t1	AT4G38620	47.761	67	31	1	12	74	65	131	6.37e-14	71.2
MS.gene07378.t1	AT5G16770	49.254	67	30	1	12	74	65	131	6.96e-14	72.0
MS.gene07378.t1	AT5G16770	49.254	67	30	1	12	74	65	131	6.96e-14	72.0
MS.gene07378.t1	AT4G22680	52.239	67	28	2	12	74	65	131	7.73e-14	70.9
MS.gene07378.t1	AT2G16720	50.746	67	29	1	12	74	65	131	7.93e-14	70.9
MS.gene07378.t1	AT3G02940	47.761	67	31	1	12	74	65	131	8.01e-14	71.6
MS.gene07378.t1	AT3G02940	47.761	67	31	1	12	74	65	131	1.13e-13	71.2
MS.gene07378.t1	AT3G02940	47.761	67	31	1	12	74	65	131	1.13e-13	71.2
MS.gene07378.t1	AT5G14340	39.759	83	47	1	31	113	10	89	1.49e-13	68.6
MS.gene07378.t1	AT1G22640	47.761	67	31	1	12	74	8	74	2.20e-13	68.6
MS.gene07378.t1	AT4G09460	38.318	107	62	1	12	114	65	171	2.27e-13	69.3
MS.gene07378.t1	AT5G54230	46.575	73	35	1	3	71	56	128	3.92e-13	69.7
MS.gene07378.t1	AT5G14340	37.500	104	59	2	13	113	79	179	4.14e-13	68.9
MS.gene07378.t1	AT5G15310	70.455	44	13	0	31	74	88	131	6.63e-13	68.9
MS.gene07378.t1	AT5G15310	70.455	44	13	0	31	74	88	131	7.36e-13	68.9
MS.gene07378.t1	AT5G15310	70.455	44	13	0	31	74	88	131	7.70e-13	67.8
MS.gene07378.t1	AT4G12350	50.000	68	30	2	12	75	65	132	7.86e-13	68.2
MS.gene07378.t1	AT5G12870	55.556	54	20	1	12	61	71	124	1.71e-12	67.4
MS.gene07378.t1	AT1G22640	47.761	67	31	1	12	74	65	131	1.72e-12	67.0
MS.gene07378.t1	AT5G62320	44.595	74	37	1	12	81	73	146	3.17e-12	65.9
MS.gene07378.t1	AT1G74080	49.231	65	29	1	12	72	65	129	3.65e-12	66.6
MS.gene07378.t1	AT1G63910	31.250	128	31	2	1	71	1	128	6.31e-12	66.2
MS.gene07378.t1	AT3G01140	50.794	63	27	2	12	70	65	127	8.31e-12	65.9
MS.gene07378.t1	AT3G01140	50.794	63	27	2	12	70	108	170	9.62e-12	65.9
MS.gene07378.t1	AT1G22640	50.000	54	27	0	21	74	6	59	1.89e-11	62.8
MS.gene07378.t1	AT1G35515	61.364	44	17	0	31	74	88	131	2.92e-11	62.8
MS.gene07378.t1	AT3G08500	56.140	57	19	2	9	60	80	135	3.25e-11	63.9
MS.gene07378.t1	AT3G28470	44.444	90	43	3	9	91	62	151	5.11e-11	63.2

Find 52 sgRNAs with CRISPR-Local

Find 87 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACAATGAAATAAAGAATTTA+TGG	0.200655	1.2:-64583832	MS.gene07378:CDS
ATCATACAGAAGAAGCTAAA+TGG	0.220741	1.2:-64583205	MS.gene07378:CDS
ATTGTTGTTATGTAAGTTTA+AGG	0.238149	1.2:+64583256	None:intergenic
ATTTCCATTGCATATGCTTT+TGG	0.239502	1.2:+64583590	None:intergenic
TTTCAAAAGGTTCAATTCAT+TGG	0.290203	1.2:+64583676	None:intergenic
CAGAAACTCAGAGAAGCTTT+TGG	0.294526	1.2:-64583002	MS.gene07378:CDS
GAGAATAATGGAGAGGAAAA+TGG	0.306414	1.2:-64583737	MS.gene07378:CDS
CATTCAACCCTCAGATTTGA+TGG	0.319312	1.2:-64583528	MS.gene07378:CDS
AACTTTGTACCAGATAGTTT+TGG	0.328603	1.2:-64583098	MS.gene07378:CDS
CTACTAGTGTTTGAATCATT+TGG	0.336320	1.2:+64583455	None:intergenic
TCAGAAGCAAGCATTAAGAT+AGG	0.337065	1.2:+64583155	None:intergenic
TCAAATTGCGGCGCAATTGC+CGG	0.343894	1.2:-64583864	MS.gene07378:CDS
TTCTTCTTGGGGAGGATTGA+TGG	0.346985	1.2:-64583231	MS.gene07378:CDS
AAGAAGAGACTGAGACAAAA+AGG	0.366324	1.2:-64583797	MS.gene07378:CDS
AAAATAGCTCCAAAACTATC+TGG	0.372468	1.2:+64583089	None:intergenic
AACCATTGGTTCAACCAAAC+TGG	0.373334	1.2:-64583431	MS.gene07378:CDS
CAAATTGCGGCGCAATTGCC+GGG	0.376424	1.2:-64583863	MS.gene07378:CDS
AAAAGCATATGCAATGGAAA+TGG	0.406668	1.2:-64583588	MS.gene07378:CDS
TCTGAGTTTCTGAATGTCCT+TGG	0.406727	1.2:+64583013	None:intergenic
TTGTCTGAGATTGAGAATAA+TGG	0.407472	1.2:-64583749	MS.gene07378:CDS
TCTTGTTCTTGCTTTGTATG+AGG	0.413126	1.2:+64583065	None:intergenic
TTGAACTCTCTGATTTCAAA+AGG	0.423755	1.2:+64583663	None:intergenic
TCATACAGAAGAAGCTAAAT+GGG	0.442713	1.2:-64583204	MS.gene07378:CDS
GTTGTTACAAGCAGAAGCTT+AGG	0.455012	1.2:-64584378	MS.gene07378:CDS
TTCCAGTTTGGTTGAACCAA+TGG	0.463181	1.2:+64583429	None:intergenic
CATGGTTGTTGATGTTGTTG+TGG	0.467386	1.2:+64583367	None:intergenic
TCATTGGATAATAATATCTC+TGG	0.476615	1.2:+64583692	None:intergenic
ATGGTTGTTGATGTTGTTGT+GGG	0.482724	1.2:+64583368	None:intergenic
TTTGTATAACTCATTTGAAG+TGG	0.483418	1.2:+64583497	None:intergenic
TTATTCTCAATCTCAGACAA+TGG	0.501529	1.2:+64583752	None:intergenic
CAGAAGCAAGCATTAAGATA+GGG	0.504178	1.2:+64583156	None:intergenic
TCTGGTACAAAGTTCATCAA+TGG	0.513100	1.2:+64583107	None:intergenic
ATTTCATTGTCTGTCCTCCC+CGG	0.513376	1.2:+64583845	None:intergenic
GACAATGGTTTATGAGTCAC+AGG	0.514909	1.2:+64583767	None:intergenic
AGAAGCTTAGGAAAGGTCTA+TGG	0.519654	1.2:-64584366	MS.gene07378:CDS
AAAATTTCCCATCAAATCTG+AGG	0.537811	1.2:+64583520	None:intergenic
ATTCAACCCTCAGATTTGAT+GGG	0.538604	1.2:-64583527	MS.gene07378:CDS
TTCACCAAAAGCATATGCAA+TGG	0.574736	1.2:-64583594	MS.gene07378:CDS
TATCAGATGGTCTCAAATTG+CGG	0.579070	1.2:-64583876	MS.gene07378:intron
AGGAAAATTCACAAATGGGA+AGG	0.581895	1.2:-64584408	None:intergenic
TTGCGGCGCAATTGCCGGGG+AGG	0.583739	1.2:-64583859	MS.gene07378:CDS
CTCTGTGGAAACATTGTCAG+AGG	0.587422	1.2:+64583301	None:intergenic
AAATTTCCCATCAAATCTGA+GGG	0.588053	1.2:+64583521	None:intergenic
CAAACACTAGTAGTAACCAT+TGG	0.594685	1.2:-64583445	MS.gene07378:CDS
GCATATGCAATGGAAATGGA+AGG	0.607612	1.2:-64583584	MS.gene07378:CDS
TACAAGCAGAAGCTTAGGAA+AGG	0.614815	1.2:-64584373	MS.gene07378:CDS
GGTACAAAGTTCATCAATGG+AGG	0.632864	1.2:+64583110	None:intergenic
GCTGCTAGTTCTCATCTCTG+TGG	0.644097	1.2:+64583286	None:intergenic
AAATTGCGGCGCAATTGCCG+GGG	0.649843	1.2:-64583862	MS.gene07378:CDS
TGAGATTGAGAATAATGGAG+AGG	0.653412	1.2:-64583744	MS.gene07378:CDS
TCTGTGGAAACATTGTCAGA+GGG	0.661164	1.2:+64583302	None:intergenic
AAAAGAATTAGGAAGAAACA+TGG	0.684494	1.2:+64583349	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AATTTTTGTTTATTATTATC+AGG	-	chr1.2:64583208-64583227	MS.gene07378:CDS	10.0%
!!	ACAATGAAATAAAGAATTTA+TGG	-	chr1.2:64583554-64583573	MS.gene07378:CDS	15.0%
!!	ACATTATTATTATATGCTAA+TGG	+	chr1.2:64583149-64583168	None:intergenic	15.0%
!!!	AACTTCTAATATATTTTCCA+AGG	-	chr1.2:64584356-64584375	MS.gene07378:CDS	20.0%
!!!	ATAACAACAATTTTTCTTCT+TGG	-	chr1.2:64584142-64584161	MS.gene07378:intron	20.0%
!!!	ATTGTTGTTATGTAAGTTTA+AGG	+	chr1.2:64584133-64584152	None:intergenic	20.0%
!!!	TAACAACAATTTTTCTTCTT+GGG	-	chr1.2:64584143-64584162	MS.gene07378:intron	20.0%
!	AAAAGAATTAGGAAGAAACA+TGG	+	chr1.2:64584040-64584059	None:intergenic	25.0%
!	CCATAGGAGAAAATAAAAAA+AGG	+	chr1.2:64583387-64583406	None:intergenic	25.0%
!	TCATTGGATAATAATATCTC+TGG	+	chr1.2:64583697-64583716	None:intergenic	25.0%
!	TTAAGACCTGATTTAAAAAG+AGG	-	chr1.2:64583277-64583296	MS.gene07378:CDS	25.0%
!	TTTCAAAAGGTTCAATTCAT+TGG	+	chr1.2:64583713-64583732	None:intergenic	25.0%
!	TTTGTATAACTCATTTGAAG+TGG	+	chr1.2:64583892-64583911	None:intergenic	25.0%
!!	AACAACAATTTTTCTTCTTG+GGG	-	chr1.2:64584144-64584163	MS.gene07378:intron	25.0%
!!	AATGTTCCTCTTTTTAAATC+AGG	+	chr1.2:64583286-64583305	None:intergenic	25.0%
!!	ACAAAGAGTTTTTCATAGAT+AGG	-	chr1.2:64583833-64583852	MS.gene07378:CDS	25.0%
!!	TATCAAAAGATTTTCCAGTT+TGG	+	chr1.2:64583972-64583991	None:intergenic	25.0%
!!	TTCATTTTCTTCTTATCAGA+TGG	-	chr1.2:64583497-64583516	MS.gene07378:CDS	25.0%
!!!	CCTTTTTTTATTTTCTCCTA+TGG	-	chr1.2:64583384-64583403	MS.gene07378:CDS	25.0%
	AAAATAGCTCCAAAACTATC+TGG	+	chr1.2:64584300-64584319	None:intergenic	30.0%
	AAAATTTCCCATCAAATCTG+AGG	+	chr1.2:64583869-64583888	None:intergenic	30.0%
	AAATTTCCCATCAAATCTGA+GGG	+	chr1.2:64583868-64583887	None:intergenic	30.0%
	AAGAAGATGAAAAACTACTG+AGG	-	chr1.2:64583050-64583069	MS.gene07378:CDS	30.0%
	ATCATACAGAAGAAGCTAAA+TGG	-	chr1.2:64584181-64584200	MS.gene07378:intron	30.0%
	CATATAACAAAGTATGGTCA+TGG	-	chr1.2:64583073-64583092	MS.gene07378:CDS	30.0%
	CTACTAGTGTTTGAATCATT+TGG	+	chr1.2:64583934-64583953	None:intergenic	30.0%
	TCATACAGAAGAAGCTAAAT+GGG	-	chr1.2:64584182-64584201	MS.gene07378:intron	30.0%
	TTATTCTCAATCTCAGACAA+TGG	+	chr1.2:64583637-64583656	None:intergenic	30.0%
	TTGAACTCTCTGATTTCAAA+AGG	+	chr1.2:64583726-64583745	None:intergenic	30.0%
	TTGTTGCAGCAAAAAGAATT+AGG	+	chr1.2:64584051-64584070	None:intergenic	30.0%
!	AAAAGCATATGCAATGGAAA+TGG	-	chr1.2:64583798-64583817	MS.gene07378:CDS	30.0%
!	AACTTTGTACCAGATAGTTT+TGG	-	chr1.2:64584288-64584307	MS.gene07378:intron	30.0%
!	AGTAGTTTTTCATCTTCTTC+TGG	+	chr1.2:64583049-64583068	None:intergenic	30.0%
!	ATTTCCATTGCATATGCTTT+TGG	+	chr1.2:64583799-64583818	None:intergenic	30.0%
!	TTGTCTGAGATTGAGAATAA+TGG	-	chr1.2:64583637-64583656	MS.gene07378:CDS	30.0%
	AAGAAGAGACTGAGACAAAA+AGG	-	chr1.2:64583589-64583608	MS.gene07378:CDS	35.0%
	ATGGTTAAGCAAGAGTGATA+AGG	-	chr1.2:64583403-64583422	MS.gene07378:CDS	35.0%
	ATGGTTGTTGATGTTGTTGT+GGG	+	chr1.2:64584021-64584040	None:intergenic	35.0%
	ATTCAACCCTCAGATTTGAT+GGG	-	chr1.2:64583859-64583878	MS.gene07378:CDS	35.0%
	CAAACACTAGTAGTAACCAT+TGG	-	chr1.2:64583941-64583960	MS.gene07378:intron	35.0%
	CAGAAGCAAGCATTAAGATA+GGG	+	chr1.2:64584233-64584252	None:intergenic	35.0%
	CTGAGGCATATAACAAAGTA+TGG	-	chr1.2:64583067-64583086	MS.gene07378:CDS	35.0%
	GATAATTTACCTGCTTGCTT+AGG	+	chr1.2:64583115-64583134	None:intergenic	35.0%
	TATCACTCTTGCTTAACCAT+AGG	+	chr1.2:64583403-64583422	None:intergenic	35.0%
	TATCAGATGGTCTCAAATTG+CGG	-	chr1.2:64583510-64583529	MS.gene07378:CDS	35.0%
	TCAGAAGCAAGCATTAAGAT+AGG	+	chr1.2:64584234-64584253	None:intergenic	35.0%
	TCTGGTACAAAGTTCATCAA+TGG	+	chr1.2:64584282-64584301	None:intergenic	35.0%
	TCTTGTTCTTGCTTTGTATG+AGG	+	chr1.2:64584324-64584343	None:intergenic	35.0%
	TTATCAGGTTTGCAAAGATG+TGG	-	chr1.2:64583223-64583242	MS.gene07378:CDS	35.0%
	TTGAACTTCATGCAGTACTA+GGG	-	chr1.2:64583332-64583351	MS.gene07378:CDS	35.0%
!	AACAATTTTTCTTCTTGGGG+AGG	-	chr1.2:64584147-64584166	MS.gene07378:intron	35.0%
!	GAGAATAATGGAGAGGAAAA+TGG	-	chr1.2:64583649-64583668	MS.gene07378:CDS	35.0%
!	TGAGATTGAGAATAATGGAG+AGG	-	chr1.2:64583642-64583661	MS.gene07378:CDS	35.0%
!	TTCACCAAAAGCATATGCAA+TGG	-	chr1.2:64583792-64583811	MS.gene07378:CDS	35.0%
	AAGAGGAACATTCTCACAAG+AGG	-	chr1.2:64583294-64583313	MS.gene07378:CDS	40.0%
	AGAAGCTTAGGAAAGGTCTA+TGG	-	chr1.2:64583020-64583039	MS.gene07378:CDS	40.0%
	CAAAGTATGGTCATGGATGT+TGG	-	chr1.2:64583080-64583099	MS.gene07378:CDS	40.0%
	CATGGTTGTTGATGTTGTTG+TGG	+	chr1.2:64584022-64584041	None:intergenic	40.0%
	CATTCAACCCTCAGATTTGA+TGG	-	chr1.2:64583858-64583877	MS.gene07378:CDS	40.0%
	GACAATGGTTTATGAGTCAC+AGG	+	chr1.2:64583622-64583641	None:intergenic	40.0%
	GCATATGCAATGGAAATGGA+AGG	-	chr1.2:64583802-64583821	MS.gene07378:CDS	40.0%
	GGTACAAAGTTCATCAATGG+AGG	+	chr1.2:64584279-64584298	None:intergenic	40.0%
	GTTAAGCAAGAGTGATAAGG+AGG	-	chr1.2:64583406-64583425	MS.gene07378:CDS	40.0%
	GTTGAACTTCATGCAGTACT+AGG	-	chr1.2:64583331-64583350	MS.gene07378:CDS	40.0%
	GTTGTTACAAGCAGAAGCTT+AGG	-	chr1.2:64583008-64583027	MS.gene07378:CDS	40.0%
	TACAAGCAGAAGCTTAGGAA+AGG	-	chr1.2:64583013-64583032	MS.gene07378:CDS	40.0%
	TCTGAGTTTCTGAATGTCCT+TGG	+	chr1.2:64584376-64584395	None:intergenic	40.0%
	TCTGTGGAAACATTGTCAGA+GGG	+	chr1.2:64584087-64584106	None:intergenic	40.0%
	TTCATGCAGTACTAGGGAAT+AGG	-	chr1.2:64583338-64583357	MS.gene07378:CDS	40.0%
	TTCCAGTTTGGTTGAACCAA+TGG	+	chr1.2:64583960-64583979	None:intergenic	40.0%
!	CAGAAACTCAGAGAAGCTTT+TGG	-	chr1.2:64584384-64584403	MS.gene07378:CDS	40.0%
!!	AACCATTGGTTCAACCAAAC+TGG	-	chr1.2:64583955-64583974	MS.gene07378:intron	40.0%
	AAAGATGTGGTAAGAGCTGC+AGG	-	chr1.2:64583236-64583255	MS.gene07378:CDS	45.0%
	AAGAGTGATAAGGAGGTCGA+GGG	-	chr1.2:64583413-64583432	MS.gene07378:CDS	45.0%
	AGTTCAGTACCTAAGCAAGC+AGG	-	chr1.2:64583103-64583122	MS.gene07378:CDS	45.0%
	ATTTCATTGTCTGTCCTCCC+CGG	+	chr1.2:64583544-64583563	None:intergenic	45.0%
	CTCTGTGGAAACATTGTCAG+AGG	+	chr1.2:64584088-64584107	None:intergenic	45.0%
	TTCTTCTTGGGGAGGATTGA+TGG	-	chr1.2:64584155-64584174	MS.gene07378:intron	45.0%
	CAAGAGTGATAAGGAGGTCG+AGG	-	chr1.2:64583412-64583431	MS.gene07378:CDS	50.0%
	TCAAATTGCGGCGCAATTGC+CGG	-	chr1.2:64583522-64583541	MS.gene07378:CDS	50.0%
!	GCTGCTAGTTCTCATCTCTG+TGG	+	chr1.2:64584103-64584122	None:intergenic	50.0%
	AAATTGCGGCGCAATTGCCG+GGG	-	chr1.2:64583524-64583543	MS.gene07378:CDS	55.0%
	CAAATTGCGGCGCAATTGCC+GGG	-	chr1.2:64583523-64583542	MS.gene07378:CDS	55.0%
	GTAAGAGCTGCAGGCTTAGG+TGG	-	chr1.2:64583245-64583264	MS.gene07378:CDS	55.0%
	GTGGTAAGAGCTGCAGGCTT+AGG	-	chr1.2:64583242-64583261	MS.gene07378:CDS	55.0%
	CGAGGGCTCGATCTCACTCT+CGG	-	chr1.2:64583430-64583449	MS.gene07378:CDS	60.0%
	TTGCGGCGCAATTGCCGGGG+AGG	-	chr1.2:64583527-64583546	MS.gene07378:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.2	gene	64582992	64584416	64582992	ID=MS.gene07378
chr1.2	mRNA	64582992	64584416	64582992	ID=MS.gene07378.t1;Parent=MS.gene07378
chr1.2	exon	64584325	64584416	64584325	ID=MS.gene07378.t1.exon1;Parent=MS.gene07378.t1
chr1.2	CDS	64584325	64584416	64584325	ID=cds.MS.gene07378.t1;Parent=MS.gene07378.t1
chr1.2	exon	64582992	64583892	64582992	ID=MS.gene07378.t1.exon2;Parent=MS.gene07378.t1
chr1.2	CDS	64582992	64583892	64582992	ID=cds.MS.gene07378.t1;Parent=MS.gene07378.t1

Gene Sequence

>MS.gene07378

ATGGGAAGGCACTCATGTTGTTACAAGCAGAAGCTTAGGAAAGGTCTATGGTCACCAGAAGAAGATGAAAAACTACTGAGGCATATAACAAAGTATGGTCATGGATGTTGGAGTTCAGTACCTAAGCAAGCAGGTAAATTATCAAATTCTATCTCCATTAGCATATAATAATAATGTTAAAATTGTTATTAAATTATTAATCATCTATTATTTTTGAATTTTTGTTTATTATTATCAGGTTTGCAAAGATGTGGTAAGAGCTGCAGGCTTAGGTGGATCAATTACTTAAGACCTGATTTAAAAAGAGGAACATTCTCACAAGAGGAAGAAAATCTCATTGTTGAACTTCATGCAGTACTAGGGAATAGGTAAATTTCAACTGCTAACTCAGTCCTTTTTTTATTTTCTCCTATGGTTAAGCAAGAGTGATAAGGAGGTCGAGGGCTCGATCTCACTCTCGGTATAATACTAACAATATTAATATCGTCAGTTTTAAAAAATTATGTTCATTTTCTTCTTATCAGATGGTCTCAAATTGCGGCGCAATTGCCGGGGAGGACAGACAATGAAATAAAGAATTTATGGAACTCTTGTTTGAAGAAGAGACTGAGACAAAAAGGTATAGATCCTGTGACTCATAAACCATTGTCTGAGATTGAGAATAATGGAGAGGAAAATGGTAATAAGAGTCAAGAGAAAGCACCAGAGATATTATTATCCAATGAATTGAACCTTTTGAAATCAGAGAGTTCAAAATCAGATGCAGCTTCTAGCTATGAGCAGAGAACAACATCTTCAATTTCACCAAAAGCATATGCAATGGAAATGGAAGGTTCTTGCAACAAAGAGTTTTTCATAGATAGGTTCATTCAACCCTCAGATTTGATGGGAAATTTTCCACTTCAAATGAGTTATACAAACACTGAAAATGATTGTTTACCAAATGATTCAAACACTAGTAGTAACCATTGGTTCAACCAAACTGGAAAATCTTTTGATATGAATACTGATCAGTTTCATTTCAATCCCACAACAACATCAACAACCATGTTTCTTCCTAATTCTTTTTGCTGCAACAATTCTCTTGATATTCCCTCTGACAATGTTTCCACAGAGATGAGAACTAGCAGCAGCAACACCTTAAACTTACATAACAACAATTTTTCTTCTTGGGGAGGATTGATGGAAAATCATACAGAAGAAGCTAAATGGGATAATAATAATAACTACTTTCAAAACCCTATCTTAATGCTTGCTTCTGAATCTTTATGCAATGAGATAAAGCCTCCATTGATGAACTTTGTACCAGATAGTTTTGGAGCTATTTTACCTCATACAAAGCAAGAACAAGAACAGTCACAAACAACTTCTAATATATTTTCCAAGGACATTCAGAAACTCAGAGAAGCTTTTGGAGATATGTGA

Protein sequence

>MS.gene07378.t1

MGRHSCCYKQKLRKGLWSPEEDEKLLRHITKWSQIAAQLPGRTDNEIKNLWNSCLKKRLRQKGIDPVTHKPLSEIENNGEENGNKSQEKAPEILLSNELNLLKSESSKSDAASSYEQRTTSSISPKAYAMEMEGSCNKEFFIDRFIQPSDLMGNFPLQMSYTNTENDCLPNDSNTSSNHWFNQTGKSFDMNTDQFHFNPTTTSTTMFLPNSFCCNNSLDIPSDNVSTEMRTSSSNTLNLHNNNFSSWGGLMENHTEEAKWDNNNNYFQNPILMLASESLCNEIKPPLMNFVPDSFGAILPHTKQEQEQSQTTSNIFSKDIQKLREAFGDM