AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene07387


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07387.t1 MTR_1g076150 97.308 260 5 2 1 260 1 258 0.0 519
MS.gene07387.t1 MTR_1g043080 67.910 268 65 9 1 260 1 255 1.89e-111 321
MS.gene07387.t1 MTR_1g076150 94.350 177 8 2 84 260 32 206 1.71e-107 309
MS.gene07387.t1 MTR_1g043050 62.642 265 83 5 1 260 1 254 2.75e-106 308
MS.gene07387.t1 MTR_7g096930 45.070 284 126 6 1 260 1 278 1.22e-76 234
MS.gene07387.t1 MTR_7g115650 46.032 252 88 5 1 252 1 204 1.79e-72 221
MS.gene07387.t1 MTR_1g100653 64.430 149 53 0 1 149 1 149 3.95e-67 210
MS.gene07387.t1 MTR_4g478180 69.925 133 37 1 1 133 2 131 9.85e-65 206
MS.gene07387.t1 MTR_3g074520 72.881 118 32 0 1 118 1 118 1.91e-62 199
MS.gene07387.t1 MTR_7g076740 73.504 117 30 1 1 116 1 117 2.64e-62 198
MS.gene07387.t1 MTR_8g031360 63.087 149 51 3 1 145 1 149 7.32e-62 197
MS.gene07387.t1 MTR_4g091490 74.359 117 29 1 1 116 1 117 3.38e-61 197
MS.gene07387.t1 MTR_8g027345 69.106 123 37 1 1 123 1 122 3.59e-61 195
MS.gene07387.t1 MTR_2g011660 73.504 117 30 1 1 116 1 117 3.67e-61 196
MS.gene07387.t1 MTR_7g117730 71.552 116 33 0 1 116 1 116 7.47e-61 192
MS.gene07387.t1 MTR_4g121460 73.276 116 31 0 1 116 1 116 1.52e-60 194
MS.gene07387.t1 MTR_7g011170 65.909 132 42 1 1 132 1 129 2.37e-60 193
MS.gene07387.t1 MTR_4g082290 60.667 150 56 1 1 150 1 147 2.76e-60 196
MS.gene07387.t1 MTR_2g089450 45.495 222 93 3 1 197 1 219 5.05e-60 190
MS.gene07387.t1 MTR_6g012690 58.333 156 56 2 1 156 1 147 8.76e-60 193
MS.gene07387.t1 MTR_5g007370 72.881 118 32 0 1 118 1 118 9.21e-60 191
MS.gene07387.t1 MTR_2g089620 72.414 116 32 0 1 116 1 116 1.18e-59 192
MS.gene07387.t1 MTR_4g073420 53.333 180 77 2 1 173 1 180 1.48e-59 190
MS.gene07387.t1 MTR_3g039990 63.504 137 47 1 1 134 2 138 1.59e-59 191
MS.gene07387.t1 MTR_0063s0090 47.297 222 93 4 1 201 1 219 1.20e-58 186
MS.gene07387.t1 MTR_0140s0030 64.567 127 45 0 1 127 2 128 1.39e-58 189
MS.gene07387.t1 MTR_0489s0020 64.567 127 45 0 1 127 2 128 1.39e-58 189
MS.gene07387.t1 MTR_2g034790 70.690 116 34 0 1 116 1 116 5.18e-58 188
MS.gene07387.t1 MTR_4g082230 59.333 150 58 1 1 150 1 147 7.45e-58 189
MS.gene07387.t1 MTR_3g083540 69.643 112 34 0 5 116 34 145 1.98e-57 185
MS.gene07387.t1 MTR_2g067420 73.554 121 32 0 3 123 5 125 2.00e-57 186
MS.gene07387.t1 MTR_5g029840 70.690 116 34 0 1 116 1 116 2.29e-57 186
MS.gene07387.t1 MTR_3g097450 60.417 144 49 1 1 144 1 136 8.53e-57 184
MS.gene07387.t1 MTR_7g010210 63.281 128 47 0 1 128 1 128 8.65e-57 184
MS.gene07387.t1 MTR_7g010210 62.791 129 48 0 1 129 1 129 9.77e-57 182
MS.gene07387.t1 MTR_8g095390 70.690 116 34 0 1 116 1 116 1.36e-56 184
MS.gene07387.t1 MTR_4g125520 68.103 116 37 0 1 116 1 116 2.61e-56 182
MS.gene07387.t1 MTR_1g085040 54.268 164 72 1 1 164 1 161 3.40e-56 184
MS.gene07387.t1 MTR_7g087130 54.268 164 65 1 1 164 1 154 1.11e-55 182
MS.gene07387.t1 MTR_0008s0390 47.783 203 84 5 1 190 1 194 2.51e-55 179
MS.gene07387.t1 MTR_2g089420 45.327 214 97 5 1 199 1 209 6.10e-55 183
MS.gene07387.t1 MTR_0251s0050 39.852 271 115 9 1 224 1 270 7.40e-55 178
MS.gene07387.t1 MTR_6g012180 69.369 111 34 0 1 111 1 111 1.11e-54 179
MS.gene07387.t1 MTR_0008s0470 46.429 196 99 3 1 190 1 196 1.47e-54 177
MS.gene07387.t1 MTR_3g065440 43.231 229 116 4 1 225 1 219 1.94e-54 178
MS.gene07387.t1 MTR_0008s0280 59.091 132 53 1 1 132 1 131 1.16e-53 173
MS.gene07387.t1 MTR_5g078140 66.102 118 40 0 1 118 1 118 1.78e-53 176
MS.gene07387.t1 MTR_6g090405 58.621 145 59 1 1 144 1 145 2.44e-53 173
MS.gene07387.t1 MTR_1g017000 66.667 117 38 1 1 116 1 117 4.10e-53 173
MS.gene07387.t1 MTR_4g102380 66.379 116 39 0 1 116 1 116 4.62e-53 173
MS.gene07387.t1 MTR_7g110830 67.797 118 38 0 1 118 1 118 5.11e-53 176
MS.gene07387.t1 MTR_3g461490 66.379 116 39 0 1 116 1 116 7.06e-53 174
MS.gene07387.t1 MTR_7g109320 69.828 116 35 0 1 116 1 116 2.27e-52 174
MS.gene07387.t1 MTR_5g079670 62.609 115 43 0 2 116 1 115 3.79e-52 169
MS.gene07387.t1 MTR_1g085640 66.102 118 40 0 1 118 1 118 4.22e-52 174
MS.gene07387.t1 MTR_7g111290 69.725 109 33 0 1 109 1 109 7.73e-52 173
MS.gene07387.t1 MTR_1g017140 52.795 161 69 2 1 160 1 155 3.15e-51 171
MS.gene07387.t1 MTR_4g105130 52.500 160 75 1 1 159 1 160 1.16e-50 170
MS.gene07387.t1 MTR_3g103570 53.947 152 68 2 1 151 1 151 4.01e-50 168
MS.gene07387.t1 MTR_4g057635 65.812 117 39 1 1 116 1 117 5.37e-50 167
MS.gene07387.t1 MTR_2g064160 64.865 111 39 0 6 116 5 115 9.46e-50 166
MS.gene07387.t1 MTR_5g014990 58.273 139 54 3 1 135 1 139 2.14e-49 165
MS.gene07387.t1 MTR_2g099740 63.793 116 42 0 1 116 1 116 2.26e-49 167
MS.gene07387.t1 MTR_3g077110 66.379 116 39 0 1 116 1 116 3.80e-49 165
MS.gene07387.t1 MTR_8g017440 62.069 116 44 0 1 116 1 116 7.84e-49 164
MS.gene07387.t1 MTR_8g017540 62.069 116 44 0 1 116 47 162 1.57e-48 165
MS.gene07387.t1 MTR_1g112760 64.912 114 40 0 3 116 4 117 1.58e-48 160
MS.gene07387.t1 MTR_6g009430 62.069 116 44 0 1 116 1 116 1.89e-48 163
MS.gene07387.t1 MTR_8g017500 60.684 117 46 0 1 117 1 117 5.23e-48 162
MS.gene07387.t1 MTR_4g485530 61.207 116 44 1 2 116 1 116 8.37e-48 157
MS.gene07387.t1 MTR_8g098860 62.069 116 44 0 1 116 1 116 1.18e-47 160
MS.gene07387.t1 MTR_7g102110 59.504 121 48 1 1 120 1 121 1.77e-47 159
MS.gene07387.t1 MTR_5g042030 64.486 107 38 0 10 116 5 111 2.26e-47 159
MS.gene07387.t1 MTR_4g097570 44.385 187 96 3 1 179 1 187 2.71e-47 159
MS.gene07387.t1 MTR_2g095520 63.964 111 39 1 1 110 1 111 5.05e-47 159
MS.gene07387.t1 MTR_4g097570 44.149 188 96 4 1 179 1 188 1.83e-46 157
MS.gene07387.t1 MTR_5g010020 63.636 110 40 0 1 110 1 110 1.73e-45 155
MS.gene07387.t1 MTR_1g110460 59.836 122 48 1 12 132 26 147 1.74e-45 155
MS.gene07387.t1 MTR_1g100667 65.385 104 36 0 13 116 14 117 2.21e-45 153
MS.gene07387.t1 MTR_6g055910 53.521 142 59 2 4 144 6 141 2.96e-45 153
MS.gene07387.t1 MTR_4g128670 63.964 111 39 1 1 110 1 111 3.33e-45 155
MS.gene07387.t1 MTR_0197s0010 47.159 176 80 5 17 183 6 177 3.69e-45 152
MS.gene07387.t1 MTR_2g097910 61.607 112 43 0 12 123 20 131 1.08e-44 153
MS.gene07387.t1 MTR_4g065017 64.762 105 37 0 12 116 17 121 1.79e-44 153
MS.gene07387.t1 MTR_8g017340 61.538 117 44 1 1 116 1 117 2.73e-44 156
MS.gene07387.t1 MTR_7g035075 58.621 116 47 1 12 126 14 129 5.53e-44 148
MS.gene07387.t1 MTR_8g017390 59.829 117 46 1 1 116 1 117 6.25e-44 154
MS.gene07387.t1 MTR_8g020490 57.627 118 46 1 1 118 1 114 1.35e-43 148
MS.gene07387.t1 MTR_6g006030 55.738 122 52 1 1 120 1 122 1.88e-43 146
MS.gene07387.t1 MTR_4g100720 61.682 107 41 0 9 115 10 116 2.09e-43 145
MS.gene07387.t1 MTR_5g079220 55.455 110 49 0 7 116 16 125 3.44e-43 148
MS.gene07387.t1 MTR_8g017350 60.684 117 45 1 1 116 1 117 4.43e-43 155
MS.gene07387.t1 MTR_1g073170 61.165 103 40 0 13 115 21 123 5.85e-43 147
MS.gene07387.t1 MTR_8g042410 61.538 104 40 0 12 115 37 140 7.76e-43 153
MS.gene07387.t1 MTR_5g079290 57.547 106 45 0 11 116 16 121 8.17e-43 147
MS.gene07387.t1 MTR_1g021230 60.577 104 41 0 12 115 57 160 2.53e-42 150
MS.gene07387.t1 MTR_1g045610 61.165 103 40 0 13 115 22 124 3.09e-42 145
MS.gene07387.t1 MTR_3g028740 63.889 108 39 0 9 116 19 126 3.81e-42 147
MS.gene07387.t1 MTR_5g079120 57.407 108 46 0 9 116 58 165 5.39e-42 145
MS.gene07387.t1 MTR_5g078800 58.491 106 44 0 11 116 6 111 8.93e-42 144
MS.gene07387.t1 MTR_3g052450 56.757 111 48 0 8 118 36 146 9.03e-42 150
MS.gene07387.t1 MTR_5g078910 58.095 105 44 0 12 116 7 111 1.07e-41 145
MS.gene07387.t1 MTR_3g052430 58.879 107 44 0 12 118 41 147 1.20e-41 149
MS.gene07387.t1 MTR_3g011610 60.577 104 41 0 12 115 37 140 1.84e-41 149
MS.gene07387.t1 MTR_1g086510 60.185 108 43 0 11 118 20 127 2.17e-41 143
MS.gene07387.t1 MTR_7g017260 52.941 119 54 1 10 126 23 141 6.51e-41 142
MS.gene07387.t1 MTR_1g086530 54.955 111 50 0 8 118 29 139 6.87e-41 142
MS.gene07387.t1 MTR_2g088170 59.813 107 43 0 9 115 26 132 4.68e-40 144
MS.gene07387.t1 MTR_0247s0040 56.311 103 45 0 11 113 6 108 5.28e-40 137
MS.gene07387.t1 MTR_0001s0360 55.660 106 47 0 11 116 6 111 1.25e-39 138
MS.gene07387.t1 MTR_5g078860 55.660 106 47 0 11 116 6 111 2.29e-39 139
MS.gene07387.t1 MTR_5g078950 56.311 103 45 0 11 113 6 108 3.05e-39 137
MS.gene07387.t1 MTR_1g062940 47.619 147 74 1 12 158 6 149 3.07e-39 136
MS.gene07387.t1 MTR_8g060940 54.902 102 46 0 11 112 6 107 1.42e-38 135
MS.gene07387.t1 MTR_0193s0090 52.830 106 50 0 11 116 6 111 2.23e-38 133
MS.gene07387.t1 MTR_2g033170 57.658 111 47 0 8 118 20 130 3.80e-38 136
MS.gene07387.t1 MTR_5g078930 54.955 111 49 1 6 115 2 112 2.72e-37 131
MS.gene07387.t1 MTR_4g063100 54.717 106 48 0 13 118 8 113 3.47e-37 132
MS.gene07387.t1 MTR_4g123040 57.658 111 47 0 8 118 20 130 9.08e-37 132
MS.gene07387.t1 MTR_2g096380 42.169 166 90 2 12 175 6 167 2.64e-36 129
MS.gene07387.t1 MTR_5g007300 65.909 88 30 0 1 88 53 140 6.16e-36 125
MS.gene07387.t1 MTR_1g083630 52.778 108 51 0 8 115 8 115 8.13e-36 134
MS.gene07387.t1 MTR_5g088640 33.469 245 136 6 13 243 13 244 2.95e-35 127
MS.gene07387.t1 MTR_5g088080 33.469 245 136 6 13 243 13 244 5.76e-35 126
MS.gene07387.t1 MTR_5g088150 33.469 245 136 6 13 243 13 244 5.76e-35 126
MS.gene07387.t1 MTR_5g488210 33.469 245 136 6 13 243 13 244 5.76e-35 126
MS.gene07387.t1 MTR_5g062790 52.427 103 48 1 13 114 10 112 1.88e-34 126
MS.gene07387.t1 MTR_5g488170 52.427 103 48 1 13 114 13 115 2.44e-34 124
MS.gene07387.t1 MTR_3g045430 50.420 119 58 1 1 118 1 119 2.43e-33 123
MS.gene07387.t1 MTR_6g055910 55.140 107 41 2 38 143 11 111 1.21e-32 120
MS.gene07387.t1 MTR_7g111290 74.627 67 17 0 43 109 1 67 6.95e-32 120
MS.gene07387.t1 MTR_8g006470 49.038 104 52 1 12 114 10 113 2.03e-31 117
MS.gene07387.t1 MTR_5g088610 51.456 103 49 1 13 114 10 112 3.55e-31 118
MS.gene07387.t1 MTR_5g049190 34.956 226 99 8 7 186 4 227 7.67e-30 112
MS.gene07387.t1 MTR_4g029540 47.222 108 56 1 8 114 6 113 8.10e-30 114
MS.gene07387.t1 MTR_4g063100 64.474 76 27 0 43 118 9 84 1.22e-29 111
MS.gene07387.t1 MTR_4g128190 41.304 138 66 3 11 147 10 133 2.49e-29 111
MS.gene07387.t1 MTR_5g016510 41.401 157 80 4 14 164 5 155 2.70e-29 112
MS.gene07387.t1 MTR_4g019370 36.464 181 106 4 14 192 38 211 6.05e-29 112
MS.gene07387.t1 MTR_3g101290 46.552 116 59 2 9 123 32 145 1.41e-28 108
MS.gene07387.t1 MTR_6g015455 53.398 103 45 2 14 115 5 105 3.91e-28 113
MS.gene07387.t1 MTR_2g096380 44.444 135 69 2 43 175 18 148 6.76e-28 106
MS.gene07387.t1 MTR_4g082040 39.850 133 77 2 14 145 105 235 1.72e-27 109
MS.gene07387.t1 MTR_1g085880 52.381 105 48 2 12 114 11 115 4.77e-27 103
MS.gene07387.t1 MTR_4g094982 49.057 106 45 2 14 115 5 105 4.85e-27 105
MS.gene07387.t1 MTR_5g041570 39.456 147 85 3 14 159 134 277 1.37e-26 107
MS.gene07387.t1 MTR_1g085770 52.381 105 48 2 12 114 11 115 2.07e-26 105
MS.gene07387.t1 MTR_6g074860 50.000 102 48 2 14 114 4 103 3.41e-26 102
MS.gene07387.t1 MTR_7g061330 38.509 161 88 3 12 163 75 233 7.86e-26 105
MS.gene07387.t1 MTR_7g061330 38.509 161 88 3 12 163 111 269 9.35e-26 105
MS.gene07387.t1 MTR_7g461410 38.509 161 88 3 12 163 111 269 9.35e-26 105
MS.gene07387.t1 MTR_3g110028 46.729 107 54 2 12 117 83 187 6.52e-25 103
MS.gene07387.t1 MTR_3g110028 34.259 108 65 3 14 118 33 137 2.21e-13 70.1
MS.gene07387.t1 MTR_1g026870 44.860 107 56 2 12 117 83 187 2.05e-24 102
MS.gene07387.t1 MTR_1g026870 34.259 108 65 3 14 118 33 137 4.54e-13 69.3
MS.gene07387.t1 MTR_5g070020 39.610 154 81 4 12 155 120 271 9.36e-24 98.6
MS.gene07387.t1 MTR_4g105660 39.831 118 68 2 8 124 174 289 1.41e-23 99.0
MS.gene07387.t1 MTR_3g077650 39.831 118 68 2 8 124 175 290 1.43e-23 99.0
MS.gene07387.t1 MTR_3g463400 41.045 134 64 3 3 135 122 241 2.65e-23 98.6
MS.gene07387.t1 MTR_3g089045 45.614 114 59 2 14 126 16 127 3.78e-23 95.9
MS.gene07387.t1 MTR_1g057980 41.667 108 61 2 12 119 78 183 3.61e-22 93.2
MS.gene07387.t1 MTR_0023s0210 48.718 78 40 0 11 88 6 83 5.58e-22 87.4
MS.gene07387.t1 MTR_7g451170 42.718 103 56 2 14 115 191 291 5.77e-22 94.4
MS.gene07387.t1 MTR_7g086960 38.621 145 83 3 14 157 89 228 8.33e-22 93.2
MS.gene07387.t1 MTR_7g037260 40.517 116 64 2 10 121 141 255 8.60e-22 93.2
MS.gene07387.t1 MTR_4g088015 39.167 120 66 3 14 128 221 338 1.36e-21 93.6
MS.gene07387.t1 MTR_7g035350 41.818 110 60 3 17 125 228 334 1.70e-21 93.2
MS.gene07387.t1 MTR_6g027340 45.263 95 49 2 17 110 19 111 3.31e-21 89.0
MS.gene07387.t1 MTR_5g082910 45.000 100 52 2 14 112 19 116 5.40e-21 90.1
MS.gene07387.t1 MTR_6g027360 44.000 100 53 2 12 110 76 173 7.04e-21 90.1
MS.gene07387.t1 MTR_6g027370 37.671 146 84 4 14 154 99 242 7.13e-21 90.5
MS.gene07387.t1 MTR_7g450950 36.090 133 81 3 14 145 157 286 5.10e-20 88.2
MS.gene07387.t1 MTR_5g010650 44.444 99 52 2 12 109 108 204 8.03e-19 85.9
MS.gene07387.t1 MTR_7g037130 37.069 116 68 2 10 121 141 255 2.21e-18 83.6
MS.gene07387.t1 MTR_7g061550 36.207 116 72 1 14 127 7 122 2.93e-18 83.6
MS.gene07387.t1 MTR_6g055910 50.667 75 30 2 70 143 2 70 5.13e-16 75.1
MS.gene07387.t1 MTR_8g468380 36.283 113 68 3 17 127 25 135 1.14e-15 76.3
MS.gene07387.t1 MTR_5g038910 39.394 99 59 1 17 115 29 126 1.66e-15 75.9
MS.gene07387.t1 MTR_5g038910 39.394 99 59 1 17 115 29 126 2.39e-15 75.1
MS.gene07387.t1 MTR_8g017480 57.692 52 22 0 1 52 1 52 2.82e-13 63.2
MS.gene07387.t1 MTR_4g063100 61.224 49 19 0 70 118 1 49 4.67e-13 66.2
MS.gene07387.t1 MTR_2g096380 38.889 108 60 2 70 175 1 104 2.14e-12 64.3
MS.gene07387.t1 MTR_1g008970 40.964 83 48 1 48 130 124 205 8.30e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07387.t1 AT2G31180 51.504 266 106 6 1 260 1 249 1.25e-81 245
MS.gene07387.t1 AT3G23250 49.141 291 104 8 1 257 1 281 5.15e-81 245
MS.gene07387.t1 AT1G06180 59.901 202 66 4 1 197 1 192 1.05e-78 238
MS.gene07387.t1 AT4G21440 75.862 116 28 0 1 116 1 116 1.17e-64 206
MS.gene07387.t1 AT3G61250 74.138 116 30 0 1 116 1 116 1.69e-64 203
MS.gene07387.t1 AT1G79180 76.923 117 27 0 3 119 5 121 2.45e-64 203
MS.gene07387.t1 AT1G16490 61.146 157 60 1 3 158 5 161 3.67e-64 202
MS.gene07387.t1 AT5G16770 73.729 118 31 0 1 118 1 118 5.91e-63 200
MS.gene07387.t1 AT5G16770 73.729 118 31 0 1 118 1 118 5.91e-63 200
MS.gene07387.t1 AT5G16770 73.729 118 31 0 1 118 1 118 1.30e-62 200
MS.gene07387.t1 AT5G16770 73.729 118 31 0 1 118 1 118 1.30e-62 200
MS.gene07387.t1 AT3G02940 72.034 118 33 0 1 118 1 118 7.54e-62 197
MS.gene07387.t1 AT1G56160 74.561 114 29 0 3 116 5 118 1.16e-61 196
MS.gene07387.t1 AT3G02940 72.034 118 33 0 1 118 1 118 1.38e-61 197
MS.gene07387.t1 AT3G02940 72.034 118 33 0 1 118 1 118 1.38e-61 197
MS.gene07387.t1 AT5G49330 63.194 144 50 1 1 141 1 144 1.01e-60 195
MS.gene07387.t1 AT4G28110 70.690 116 34 0 1 116 1 116 2.49e-60 192
MS.gene07387.t1 AT3G01140 71.552 116 33 0 1 116 1 116 9.21e-60 193
MS.gene07387.t1 AT5G15310 65.152 132 43 1 1 132 1 129 1.18e-59 192
MS.gene07387.t1 AT5G15310 65.152 132 43 1 1 132 1 129 1.43e-59 191
MS.gene07387.t1 AT1G34670 72.034 118 33 0 1 118 1 118 1.48e-59 193
MS.gene07387.t1 AT5G15310 65.152 132 43 1 1 132 1 129 1.53e-59 189
MS.gene07387.t1 AT3G13540 70.796 113 33 0 4 116 15 127 1.55e-59 189
MS.gene07387.t1 AT2G16720 71.552 116 33 0 1 116 1 116 1.78e-59 189
MS.gene07387.t1 AT4G05100 71.795 117 32 1 1 116 1 117 1.86e-59 191
MS.gene07387.t1 AT3G28910 65.354 127 44 0 1 127 1 127 2.94e-59 191
MS.gene07387.t1 AT3G12820 73.684 114 30 0 3 116 5 118 3.99e-59 188
MS.gene07387.t1 AT4G38620 58.896 163 61 3 1 162 1 158 6.18e-59 189
MS.gene07387.t1 AT5G10280 69.492 118 36 0 1 118 1 118 1.16e-58 189
MS.gene07387.t1 AT3G01140 70.690 116 34 0 1 116 44 159 1.42e-58 191
MS.gene07387.t1 AT2G47460 61.074 149 49 2 1 149 1 140 3.42e-58 189
MS.gene07387.t1 AT1G22640 68.966 116 36 0 1 116 1 116 3.51e-58 186
MS.gene07387.t1 AT4G09460 68.966 116 36 0 1 116 1 116 5.24e-58 185
MS.gene07387.t1 AT1G08810 65.079 126 44 0 1 126 1 126 6.72e-58 186
MS.gene07387.t1 AT1G35515 68.103 116 37 0 1 116 1 116 1.10e-57 183
MS.gene07387.t1 AT1G79180 60.000 150 27 1 3 119 5 154 1.74e-57 186
MS.gene07387.t1 AT5G65230 70.339 118 35 0 1 118 1 118 3.36e-57 185
MS.gene07387.t1 AT5G62470 67.500 120 39 0 1 120 1 120 4.33e-57 186
MS.gene07387.t1 AT1G57560 48.780 205 91 4 1 194 1 202 1.07e-56 184
MS.gene07387.t1 AT4G17785 66.387 119 39 1 1 118 1 119 2.26e-56 184
MS.gene07387.t1 AT4G17785 66.387 119 39 1 1 118 1 119 2.58e-56 184
MS.gene07387.t1 AT1G57560 55.215 163 70 1 1 163 1 160 2.88e-56 182
MS.gene07387.t1 AT5G16600 68.966 116 36 0 1 116 1 116 4.17e-56 183
MS.gene07387.t1 AT1G74650 69.828 116 35 0 1 116 1 116 4.93e-56 182
MS.gene07387.t1 AT3G47600 66.667 120 40 0 1 120 1 120 4.95e-56 183
MS.gene07387.t1 AT5G62470 67.500 120 38 1 1 120 1 119 1.21e-55 182
MS.gene07387.t1 AT3G62610 69.231 117 36 0 1 117 1 117 1.65e-55 182
MS.gene07387.t1 AT4G34990 60.563 142 55 1 1 141 1 142 2.53e-55 179
MS.gene07387.t1 AT4G22680 66.379 116 39 0 1 116 1 116 9.13e-55 177
MS.gene07387.t1 AT4G12350 67.241 116 38 0 1 116 1 116 1.28e-54 177
MS.gene07387.t1 AT5G60890 64.407 118 42 0 1 118 1 118 1.72e-54 177
MS.gene07387.t1 AT1G18570 67.521 117 37 1 1 116 1 117 3.14e-54 179
MS.gene07387.t1 AT1G74080 66.379 116 39 0 1 116 1 116 4.51e-54 178
MS.gene07387.t1 AT1G66230 65.254 118 41 0 1 118 1 118 3.85e-53 174
MS.gene07387.t1 AT5G14340 66.379 116 39 0 1 116 13 128 3.89e-53 174
MS.gene07387.t1 AT1G09540 66.102 118 40 0 1 118 1 118 5.11e-53 176
MS.gene07387.t1 AT5G26660 68.103 116 37 0 1 116 1 116 6.66e-53 175
MS.gene07387.t1 AT4G01680 68.103 116 37 0 1 116 1 116 1.50e-52 171
MS.gene07387.t1 AT5G54230 73.333 105 28 0 12 116 12 116 2.58e-52 173
MS.gene07387.t1 AT4G01680 68.103 116 37 0 1 116 1 116 7.95e-52 172
MS.gene07387.t1 AT4G37780 64.103 117 41 1 1 116 1 117 1.56e-51 170
MS.gene07387.t1 AT5G07690 65.517 116 40 0 1 116 1 116 3.20e-51 171
MS.gene07387.t1 AT5G61420 64.655 116 41 0 1 116 1 116 3.37e-51 171
MS.gene07387.t1 AT5G56110 66.379 116 39 0 1 116 1 116 5.47e-51 169
MS.gene07387.t1 AT3G12720 64.865 111 39 0 6 116 16 126 1.53e-49 165
MS.gene07387.t1 AT5G62320 43.478 184 92 3 3 174 4 187 1.87e-49 163
MS.gene07387.t1 AT3G13890 62.931 116 43 0 1 116 1 116 6.51e-49 165
MS.gene07387.t1 AT5G07700 62.931 116 43 0 1 116 1 116 9.55e-49 164
MS.gene07387.t1 AT5G07700 62.931 116 43 0 1 116 1 116 9.55e-49 164
MS.gene07387.t1 AT3G49690 64.957 117 40 1 1 116 1 117 1.49e-48 163
MS.gene07387.t1 AT4G01680 61.719 128 37 1 1 116 1 128 2.17e-48 163
MS.gene07387.t1 AT5G57620 64.103 117 41 1 1 116 1 117 4.20e-48 162
MS.gene07387.t1 AT5G23000 63.248 117 42 1 1 116 1 117 5.02e-48 162
MS.gene07387.t1 AT5G14750 59.292 113 46 0 13 125 17 129 7.34e-48 158
MS.gene07387.t1 AT5G35550 50.980 153 69 1 12 164 14 160 1.62e-47 159
MS.gene07387.t1 AT5G65790 63.248 117 42 1 1 116 1 117 1.63e-47 162
MS.gene07387.t1 AT2G36890 64.167 120 42 1 1 119 1 120 1.95e-47 159
MS.gene07387.t1 AT2G36890 64.167 120 42 1 1 119 42 161 2.98e-47 160
MS.gene07387.t1 AT1G63910 43.137 204 112 2 1 203 1 201 5.94e-47 160
MS.gene07387.t1 AT5G40330 43.558 163 80 1 13 175 13 163 6.19e-47 156
MS.gene07387.t1 AT1G74430 65.094 106 37 0 11 116 11 116 5.36e-46 155
MS.gene07387.t1 AT3G13890 58.400 125 43 1 1 116 1 125 8.42e-46 157
MS.gene07387.t1 AT2G32460 62.037 108 41 0 8 115 14 121 3.56e-45 158
MS.gene07387.t1 AT3G27810 54.198 131 60 0 12 142 20 150 4.00e-45 151
MS.gene07387.t1 AT2G32460 62.857 105 39 0 11 115 5 109 6.95e-45 157
MS.gene07387.t1 AT3G27920 57.798 109 46 0 8 116 10 118 1.52e-44 150
MS.gene07387.t1 AT3G28470 48.485 165 67 3 1 149 1 163 1.60e-44 152
MS.gene07387.t1 AT1G18710 61.111 108 42 0 11 118 11 118 1.81e-44 151
MS.gene07387.t1 AT3G24310 59.504 121 46 2 11 128 17 137 2.34e-44 150
MS.gene07387.t1 AT1G68320 53.191 141 58 2 12 144 19 159 3.72e-44 150
MS.gene07387.t1 AT5G55020 61.682 107 41 0 12 118 26 132 5.26e-44 155
MS.gene07387.t1 AT3G30210 39.604 202 108 3 11 198 26 227 6.15e-44 150
MS.gene07387.t1 AT3G01530 47.682 151 75 2 12 162 25 171 1.07e-43 147
MS.gene07387.t1 AT5G52600 55.085 118 53 0 12 129 12 129 1.88e-43 146
MS.gene07387.t1 AT5G40350 60.952 105 41 0 12 116 17 121 3.01e-43 146
MS.gene07387.t1 AT5G06100 60.000 105 42 0 11 115 31 135 3.04e-43 152
MS.gene07387.t1 AT4G13480 59.292 113 46 0 13 125 7 119 3.28e-43 147
MS.gene07387.t1 AT5G06100 60.000 105 42 0 11 115 31 135 1.24e-42 152
MS.gene07387.t1 AT5G06100 60.000 105 42 0 11 115 31 135 1.24e-42 152
MS.gene07387.t1 AT5G06100 60.000 105 42 0 11 115 31 135 1.24e-42 152
MS.gene07387.t1 AT5G06100 60.000 105 42 0 11 115 31 135 1.24e-42 152
MS.gene07387.t1 AT5G12870 62.857 105 39 0 12 116 18 122 1.45e-42 146
MS.gene07387.t1 AT3G08500 62.857 105 39 0 12 116 30 134 5.72e-42 147
MS.gene07387.t1 AT4G26930 59.223 103 42 0 12 114 19 121 7.32e-42 147
MS.gene07387.t1 AT2G26960 57.547 106 45 0 9 114 17 122 1.05e-41 148
MS.gene07387.t1 AT3G48920 57.018 114 49 0 13 126 19 132 2.14e-41 143
MS.gene07387.t1 AT1G25340 58.333 108 45 0 13 120 19 126 5.43e-41 142
MS.gene07387.t1 AT3G11440 56.731 104 45 0 12 115 41 144 1.51e-40 145
MS.gene07387.t1 AT5G52260 57.143 119 51 0 9 127 9 127 3.40e-40 140
MS.gene07387.t1 AT3G11440 56.731 104 45 0 12 115 41 144 4.92e-40 145
MS.gene07387.t1 AT3G11440 56.731 104 45 0 12 115 41 144 4.92e-40 145
MS.gene07387.t1 AT3G11440 56.731 104 45 0 12 115 41 144 4.92e-40 145
MS.gene07387.t1 AT4G25560 63.107 103 38 0 13 115 11 113 5.27e-40 140
MS.gene07387.t1 AT5G49620 49.367 158 71 3 8 158 22 177 6.86e-40 140
MS.gene07387.t1 AT1G48000 60.194 103 41 0 12 114 32 134 1.09e-39 138
MS.gene07387.t1 AT2G47190 55.556 108 48 0 8 115 16 123 1.21e-39 139
MS.gene07387.t1 AT1G66370 50.806 124 58 1 11 131 7 130 2.41e-39 137
MS.gene07387.t1 AT3G23250 41.026 234 94 8 58 257 1 224 2.69e-39 136
MS.gene07387.t1 AT3G06490 59.459 111 45 0 8 118 15 125 2.17e-38 137
MS.gene07387.t1 AT3G46130 51.261 119 53 1 11 129 8 121 1.30e-37 133
MS.gene07387.t1 AT5G59780 51.282 117 52 1 13 129 9 120 5.93e-37 130
MS.gene07387.t1 AT1G25340 55.556 108 43 1 13 120 19 121 1.03e-36 131
MS.gene07387.t1 AT1G66380 57.143 105 45 0 11 115 7 111 1.78e-36 126
MS.gene07387.t1 AT1G25340 55.556 108 43 1 13 120 19 121 1.78e-36 131
MS.gene07387.t1 AT3G53200 55.963 109 48 0 12 120 9 117 3.77e-36 129
MS.gene07387.t1 AT5G49620 45.349 172 71 4 8 158 22 191 4.84e-36 130
MS.gene07387.t1 AT1G66390 57.143 105 45 0 11 115 7 111 2.85e-35 127
MS.gene07387.t1 AT1G56650 56.190 105 46 0 11 115 7 111 3.26e-35 126
MS.gene07387.t1 AT5G35550 36.538 208 109 4 39 234 44 240 4.33e-35 126
MS.gene07387.t1 AT5G14750 58.065 93 34 1 38 125 3 95 5.55e-35 124
MS.gene07387.t1 AT3G12820 75.714 70 17 0 47 116 1 70 1.77e-34 123
MS.gene07387.t1 AT5G26660 75.000 72 18 0 45 116 14 85 7.98e-33 122
MS.gene07387.t1 AT3G47600 69.737 76 23 0 45 120 39 114 2.91e-31 118
MS.gene07387.t1 AT3G27810 55.102 98 44 0 45 142 4 101 9.43e-31 113
MS.gene07387.t1 AT3G60460 44.954 109 59 1 7 114 6 114 3.36e-30 115
MS.gene07387.t1 AT2G26950 47.525 101 53 0 9 109 13 113 1.03e-29 115
MS.gene07387.t1 AT5G11510 30.916 262 138 6 12 243 79 327 8.49e-29 115
MS.gene07387.t1 AT3G46130 59.302 86 30 1 44 129 9 89 8.69e-29 109
MS.gene07387.t1 AT5G40350 65.278 72 25 0 45 116 5 76 1.06e-28 107
MS.gene07387.t1 AT5G11510 30.916 262 138 6 12 243 79 327 1.07e-28 114
MS.gene07387.t1 AT2G23290 52.427 103 46 2 14 115 13 113 1.62e-28 110
MS.gene07387.t1 AT5G11510 30.916 262 138 6 12 243 79 327 1.64e-28 114
MS.gene07387.t1 AT5G11510 30.916 262 138 6 12 243 79 327 1.64e-28 114
MS.gene07387.t1 AT5G11510 30.916 262 138 6 12 243 79 327 1.64e-28 114
MS.gene07387.t1 AT4G37260 37.647 170 95 3 5 165 4 171 1.65e-28 110
MS.gene07387.t1 AT3G46130 60.000 85 29 1 45 129 20 99 2.22e-28 108
MS.gene07387.t1 AT5G59780 60.000 85 29 1 45 129 20 99 2.58e-28 107
MS.gene07387.t1 AT3G53200 61.842 76 29 0 45 120 9 84 2.70e-27 104
MS.gene07387.t1 AT1G69560 43.411 129 67 3 9 133 102 228 5.90e-27 107
MS.gene07387.t1 AT1G69560 43.411 129 67 3 9 133 118 244 7.41e-27 107
MS.gene07387.t1 AT3G09230 38.095 147 78 3 14 152 55 196 8.35e-27 107
MS.gene07387.t1 AT1G17950 49.533 107 51 2 10 115 1 105 1.06e-26 104
MS.gene07387.t1 AT3G50060 43.066 137 69 4 14 144 6 139 2.40e-26 104
MS.gene07387.t1 AT1G22640 74.576 59 15 0 58 116 1 59 3.49e-26 102
MS.gene07387.t1 AT3G55730 49.057 106 45 2 14 115 56 156 6.28e-26 105
MS.gene07387.t1 AT1G73410 36.098 205 111 6 14 211 6 197 7.67e-26 100
MS.gene07387.t1 AT1G73410 35.577 208 113 6 14 215 6 198 8.34e-26 102
MS.gene07387.t1 AT5G02320 48.113 106 52 2 12 116 125 228 9.62e-26 105
MS.gene07387.t1 AT5G02320 34.906 106 63 3 10 112 71 173 3.22e-13 69.3
MS.gene07387.t1 AT5G02320 48.113 106 52 2 12 116 125 228 9.62e-26 105
MS.gene07387.t1 AT5G02320 34.906 106 63 3 10 112 71 173 3.22e-13 69.3
MS.gene07387.t1 AT5G02320 48.113 106 52 2 12 116 65 168 1.45e-25 105
MS.gene07387.t1 AT5G02320 34.906 106 63 3 10 112 11 113 5.32e-13 68.6
MS.gene07387.t1 AT1G26780 44.828 116 61 2 12 126 96 209 1.47e-25 102
MS.gene07387.t1 AT2G39880 49.057 106 45 2 14 115 50 150 1.60e-25 103
MS.gene07387.t1 AT1G26780 44.828 116 61 2 12 126 96 209 2.40e-25 103
MS.gene07387.t1 AT5G67300 48.544 103 50 2 14 115 6 106 3.83e-25 101
MS.gene07387.t1 AT1G66380 61.644 73 28 0 43 115 6 78 9.60e-25 95.1
MS.gene07387.t1 AT5G14750 60.294 68 27 0 58 125 1 68 1.21e-24 96.3
MS.gene07387.t1 AT5G14750 60.294 68 27 0 58 125 1 68 1.21e-24 96.3
MS.gene07387.t1 AT4G33450 41.803 122 63 3 3 123 13 127 1.36e-24 99.0
MS.gene07387.t1 AT3G09370 47.619 105 52 2 12 115 133 235 1.88e-24 102
MS.gene07387.t1 AT3G09370 35.849 106 66 2 14 118 83 187 1.36e-13 70.5
MS.gene07387.t1 AT3G09370 47.619 105 52 2 12 115 128 230 1.97e-24 102
MS.gene07387.t1 AT3G09370 35.849 106 66 2 14 118 78 182 1.45e-13 70.5
MS.gene07387.t1 AT3G09370 47.619 105 52 2 12 115 141 243 2.57e-24 101
MS.gene07387.t1 AT3G09370 35.849 106 66 2 14 118 91 195 1.49e-13 70.5
MS.gene07387.t1 AT3G27785 49.020 102 49 2 8 108 183 282 3.09e-24 100
MS.gene07387.t1 AT4G18770 39.831 118 68 2 8 124 211 326 6.78e-24 99.8
MS.gene07387.t1 AT3G29020 40.870 115 65 2 14 127 65 177 7.10e-24 96.7
MS.gene07387.t1 AT4G32730 43.925 107 57 2 12 117 85 189 1.07e-23 100
MS.gene07387.t1 AT4G32730 34.259 108 65 3 14 118 35 139 1.13e-13 70.9
MS.gene07387.t1 AT4G32730 43.925 107 57 2 12 117 85 189 1.07e-23 100
MS.gene07387.t1 AT4G32730 34.259 108 65 3 14 118 35 139 1.13e-13 70.9
MS.gene07387.t1 AT4G32730 43.925 107 57 2 12 117 85 189 1.07e-23 100
MS.gene07387.t1 AT4G32730 34.259 108 65 3 14 118 35 139 1.13e-13 70.9
MS.gene07387.t1 AT4G32730 43.925 107 57 2 12 117 85 189 1.07e-23 100
MS.gene07387.t1 AT4G32730 34.259 108 65 3 14 118 35 139 1.13e-13 70.9
MS.gene07387.t1 AT4G32730 43.925 107 57 2 12 117 85 189 1.14e-23 100
MS.gene07387.t1 AT4G32730 34.259 108 65 3 14 118 35 139 1.25e-13 70.9
MS.gene07387.t1 AT3G29020 40.870 115 65 2 14 127 67 179 1.35e-23 97.4
MS.gene07387.t1 AT5G58850 35.821 201 103 7 12 209 103 280 2.10e-23 98.6
MS.gene07387.t1 AT5G40360 37.984 129 66 3 12 140 156 270 4.58e-23 96.7
MS.gene07387.t1 AT1G71030 54.430 79 35 1 38 116 7 84 1.35e-22 92.4
MS.gene07387.t1 AT1G71030 59.091 66 27 0 51 116 5 70 1.63e-22 91.7
MS.gene07387.t1 AT5G11050 41.429 140 64 4 14 149 105 230 2.70e-22 95.5
MS.gene07387.t1 AT1G66380 51.220 82 40 0 11 92 7 88 4.27e-22 88.6
MS.gene07387.t1 AT1G18960 43.220 118 60 4 1 118 1 111 9.11e-22 92.4
MS.gene07387.t1 AT5G17800 38.525 122 71 2 14 135 93 210 1.39e-20 89.4
MS.gene07387.t1 AT2G37630 40.517 116 66 2 14 127 4 118 1.34e-19 87.4
MS.gene07387.t1 AT4G00540 35.542 166 94 4 12 165 101 265 2.02e-19 87.0
MS.gene07387.t1 AT4G00540 34.579 107 62 3 14 112 46 152 2.80e-12 66.2
MS.gene07387.t1 AT4G00540 35.542 166 94 4 12 165 99 263 2.66e-19 87.0
MS.gene07387.t1 AT4G00540 34.579 107 62 3 14 112 44 150 4.52e-12 65.9
MS.gene07387.t1 AT5G39700 41.667 96 55 1 15 110 57 151 1.06e-17 79.0
MS.gene07387.t1 AT2G25230 38.835 103 60 2 17 118 29 129 8.01e-17 77.8
MS.gene07387.t1 AT1G14350 38.095 126 67 3 17 132 28 152 1.79e-16 79.0
MS.gene07387.t1 AT1G14350 38.095 126 67 3 17 132 28 152 1.79e-16 79.0
MS.gene07387.t1 AT2G02820 40.404 99 58 1 17 115 33 130 7.87e-16 76.3
MS.gene07387.t1 AT2G02820 40.404 99 58 1 17 115 33 130 1.36e-15 76.3
MS.gene07387.t1 AT2G02820 40.404 99 58 1 17 115 33 130 1.39e-15 76.3
MS.gene07387.t1 AT4G25560 72.093 43 12 0 73 115 5 47 1.18e-14 71.2
MS.gene07387.t1 AT3G28910 58.000 50 21 0 78 127 2 51 6.44e-14 69.7
MS.gene07387.t1 AT5G59780 55.000 60 22 1 70 129 1 55 9.09e-14 67.8
MS.gene07387.t1 AT3G46130 55.000 60 22 1 70 129 1 55 9.93e-14 68.2
MS.gene07387.t1 AT5G40430 37.500 80 49 1 48 127 86 164 1.83e-13 68.6
MS.gene07387.t1 AT1G16490 47.561 82 40 2 78 158 13 92 6.13e-13 66.2
MS.gene07387.t1 AT1G74650 71.795 39 11 0 78 116 2 40 6.13e-12 64.3
MS.gene07387.t1 AT3G18100 35.417 96 61 1 13 108 545 639 9.15e-12 65.5
MS.gene07387.t1 AT3G18100 35.417 96 61 1 13 108 497 591 1.15e-11 65.1
MS.gene07387.t1 AT3G18100 35.417 96 61 1 13 108 384 478 1.18e-11 64.7
MS.gene07387.t1 AT3G18100 35.417 96 61 1 13 108 332 426 1.37e-11 64.7

Find 46 sgRNAs with CRISPR-Local

Find 124 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGGTATGATATATTTATT+AGG 0.245657 1.2:+64460751 MS.gene07387:CDS
AAATTTCCTCTCTTGATATC+AGG 0.312949 1.2:-64459292 None:intergenic
CGTGCCCTCCCAAAGCTTGC+AGG 0.328829 1.2:+64458725 MS.gene07387:CDS
ATTTCATTGTCCGTTCTTCC+TGG 0.345249 1.2:-64460312 None:intergenic
CTGCAAGTACCTGCAAGCTT+TGG 0.364999 1.2:-64458734 None:intergenic
TCTTTGTTTCCGAGTTTGTT+TGG 0.396013 1.2:-64460374 None:intergenic
CTCTCTGGAAGAATTTCATC+AGG 0.402583 1.2:-64460684 None:intergenic
ATTTCATTTGAGATTGTCAA+TGG 0.421450 1.2:-64460645 None:intergenic
TGCAAGTACCTGCAAGCTTT+GGG 0.422644 1.2:-64458733 None:intergenic
TACATGAAATGCTTGGAAAC+AGG 0.426813 1.2:+64459347 MS.gene07387:CDS
AGCTCCTTGCTGTGAAAAGA+TGG 0.433624 1.2:+64458622 MS.gene07387:CDS
CAAACTCGGAAACAAAGAAA+AGG 0.446812 1.2:+64460379 MS.gene07387:CDS
TATGATATATTTATTAGGAC+TGG 0.454809 1.2:+64460756 MS.gene07387:CDS
TATAATTCTAACTTGGATGA+TGG 0.461037 1.2:+64460720 MS.gene07387:CDS
TTGGTCAGAAGCAGCAGCAT+TGG 0.478820 1.2:+64460590 MS.gene07387:CDS
ATTAAGCTACATGAAATGCT+TGG 0.489832 1.2:+64459340 MS.gene07387:CDS
GTGGGAAAAGCTGCAGACTT+AGG 0.491225 1.2:+64459251 MS.gene07387:CDS
TGGGATTGAAGAGGGGTCCT+TGG 0.493355 1.2:+64458642 MS.gene07387:CDS
TGTCACTATTGGTGAAAGAA+AGG 0.495083 1.2:+64460506 MS.gene07387:CDS
TAATCTTCATGAGTACTCTC+TGG 0.500360 1.2:-64460699 None:intergenic
AATTATTATTTCTAGGTGGT+CGG 0.500708 1.2:+64460272 MS.gene07387:intron
TTCTAACTTGGATGATGGCA+TGG 0.501664 1.2:+64460725 MS.gene07387:CDS
TGAAGATTATAATTCTAACT+TGG 0.504622 1.2:+64460713 MS.gene07387:CDS
AAGTGAAGACATTGAGTCCA+TGG 0.505416 1.2:+64460536 MS.gene07387:CDS
TTTCAGGCTTGTTAAGGTGT+GGG 0.509874 1.2:+64459233 MS.gene07387:intron
GGAGGGCACGCCAATTGCCA+TGG 0.528545 1.2:-64458712 None:intergenic
AAACTCGGAAACAAAGAAAA+GGG 0.536700 1.2:+64460380 MS.gene07387:CDS
TGAAAAGATGGGATTGAAGA+GGG 0.553977 1.2:+64458634 MS.gene07387:CDS
GAGGGGTCCTTGGTCTCTTG+AGG 0.562635 1.2:+64458652 MS.gene07387:CDS
GGAAAACCCTCTCAAAACTC+AGG 0.565148 1.2:-64460795 None:intergenic
TACAGCCATTGTCTCCTCCA+TGG 0.567393 1.2:-64460553 None:intergenic
ATTTCATCAGGGTATTGAAG+TGG 0.575754 1.2:-64460672 None:intergenic
GTGAAAAGATGGGATTGAAG+AGG 0.580574 1.2:+64458633 MS.gene07387:CDS
GCTCCTTGCTGTGAAAAGAT+GGG 0.581660 1.2:+64458623 MS.gene07387:CDS
TGAGTCCATGGAGGAGACAA+TGG 0.582281 1.2:+64460548 MS.gene07387:CDS
AGCAAAATTACCAGGAAGAA+CGG 0.586442 1.2:+64460302 MS.gene07387:CDS
GGAAAAGCTGCAGACTTAGG+TGG 0.597620 1.2:+64459254 MS.gene07387:CDS
GCAATTGCAGCAAAATTACC+AGG 0.598499 1.2:+64460294 MS.gene07387:CDS
AAGTACCTGCAAGCTTTGGG+AGG 0.609605 1.2:-64458730 None:intergenic
TTAAGACCTGATATCAAGAG+AGG 0.616720 1.2:+64459286 MS.gene07387:CDS
TCATCTTCCTCAAGAGACCA+AGG 0.622778 1.2:-64458659 None:intergenic
GAAGCTAAACCAAACAAACT+CGG 0.632566 1.2:+64460365 MS.gene07387:CDS
AGTACCTGCAAGCTTTGGGA+GGG 0.651946 1.2:-64458729 None:intergenic
TCTCTGGAAGAATTTCATCA+GGG 0.690572 1.2:-64460683 None:intergenic
GAAAAGATGGGATTGAAGAG+GGG 0.697832 1.2:+64458635 MS.gene07387:CDS
TGAAGACATTGAGTCCATGG+AGG 0.737546 1.2:+64460539 MS.gene07387:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTTATTTAAGTAAGAAA+TGG + chr1.2:64459494-64459513 MS.gene07387:intron 10.0%
!!! TTAATTGAATTATTATTTCT+AGG + chr1.2:64460265-64460284 MS.gene07387:intron 10.0%
!!! TTTTTTTTATCAATTTTTTC+AGG + chr1.2:64459217-64459236 MS.gene07387:intron 10.0%
!! AAAACTAGGTAAAATTATTA+GGG - chr1.2:64459036-64459055 None:intergenic 15.0%
!! CAATCATGTAAATTAAAAAT+TGG - chr1.2:64459417-64459436 None:intergenic 15.0%
!! TAAAACTAGGTAAAATTATT+AGG - chr1.2:64459037-64459056 None:intergenic 15.0%
!! TTTGGTATGATATATTTATT+AGG + chr1.2:64460751-64460770 MS.gene07387:CDS 15.0%
!!! ATCTTTCAAGTAATATATAT+AGG + chr1.2:64458808-64458827 MS.gene07387:intron 15.0%
!!! ATGTTTGTTAAATTAAAACT+AGG - chr1.2:64459050-64459069 None:intergenic 15.0%
!!! GTTTTTAAAAGTAGAATTAA+AGG - chr1.2:64459679-64459698 None:intergenic 15.0%
!!! TAATTCTACTTTTAAAAACT+AGG + chr1.2:64459680-64459699 MS.gene07387:intron 15.0%
!! AAAAATCTTTCATGTAACAT+AGG + chr1.2:64458778-64458797 MS.gene07387:intron 20.0%
!! AATTAGAGAAAAAGAAAAGA+TGG - chr1.2:64459532-64459551 None:intergenic 20.0%
!! ACAATGAAATAAAAAATGTG+TGG + chr1.2:64460325-64460344 MS.gene07387:CDS 20.0%
!! ACACTAATGTAAAAAATTGA+TGG - chr1.2:64458854-64458873 None:intergenic 20.0%
!! ACATAATTTAAATTCTCTCT+GGG + chr1.2:64460182-64460201 MS.gene07387:intron 20.0%
!! AGTGGTAATATAAAAAGTAA+AGG + chr1.2:64459724-64459743 MS.gene07387:intron 20.0%
!! ATTGATAAACAAGATTAAAG+TGG + chr1.2:64459549-64459568 MS.gene07387:intron 20.0%
!! GATGGTACATAATTAATTAT+AGG - chr1.2:64459804-64459823 None:intergenic 20.0%
!! GGAACAAAATTAAAATCAAA+AGG + chr1.2:64459612-64459631 MS.gene07387:intron 20.0%
!! GTTGTGTATACTAAATATAA+TGG + chr1.2:64459634-64459653 MS.gene07387:intron 20.0%
!! TAAAAAAAATTGGGATGATT+TGG + chr1.2:64459176-64459195 MS.gene07387:intron 20.0%
!! TATGATATATTTATTAGGAC+TGG + chr1.2:64460756-64460775 MS.gene07387:CDS 20.0%
!! TCATAATATCTAATGTCTTA+AGG + chr1.2:64458965-64458984 MS.gene07387:intron 20.0%
!! TGAAGATTATAATTCTAACT+TGG + chr1.2:64460713-64460732 MS.gene07387:CDS 20.0%
!!! AAATTTTACAAATGAAGAAG+AGG + chr1.2:64459309-64459328 MS.gene07387:CDS 20.0%
!!! ATTGAATTATTATTTCTAGG+TGG + chr1.2:64460268-64460287 MS.gene07387:intron 20.0%
!!! ATTTAAGTAAGAAATGGATT+TGG + chr1.2:64459500-64459519 MS.gene07387:intron 20.0%
!!! TGTTTTGTATTATTTCATGA+TGG - chr1.2:64459822-64459841 None:intergenic 20.0%
! AAGTGTTAGATATACAAAAG+AGG + chr1.2:64458938-64458957 MS.gene07387:intron 25.0%
! ATAAACAAGATTAAAGTGGT+GGG + chr1.2:64459553-64459572 MS.gene07387:intron 25.0%
! GACATAATTTAAATTCTCTC+TGG + chr1.2:64460181-64460200 MS.gene07387:intron 25.0%
! TATAATTCTAACTTGGATGA+TGG + chr1.2:64460720-64460739 MS.gene07387:CDS 25.0%
! TTGACAATTCATAATGCATA+TGG - chr1.2:64459589-64459608 None:intergenic 25.0%
!! AATGGTGTTAACTATAAGAT+GGG - chr1.2:64459104-64459123 None:intergenic 25.0%
!! ATAAACAGAACATGTTGATT+AGG - chr1.2:64459445-64459464 None:intergenic 25.0%
!! ATTTCATTTGAGATTGTCAA+TGG - chr1.2:64460648-64460667 None:intergenic 25.0%
!! TAATGGTGTTAACTATAAGA+TGG - chr1.2:64459105-64459124 None:intergenic 25.0%
!!! AATTATTATTTCTAGGTGGT+CGG + chr1.2:64460272-64460291 MS.gene07387:intron 25.0%
!!! TAATGTCTTAAGGTTTTAAG+CGG + chr1.2:64458975-64458994 MS.gene07387:intron 25.0%
AAACTCGGAAACAAAGAAAA+GGG + chr1.2:64460380-64460399 MS.gene07387:CDS 30.0%
AAATTTCCTCTCTTGATATC+AGG - chr1.2:64459295-64459314 None:intergenic 30.0%
ACATCTTACATCCAAAAACA+TGG + chr1.2:64458689-64458708 MS.gene07387:CDS 30.0%
ATTAAGCTACATGAAATGCT+TGG + chr1.2:64459340-64459359 MS.gene07387:CDS 30.0%
GATAAACAAGATTAAAGTGG+TGG + chr1.2:64459552-64459571 MS.gene07387:intron 30.0%
GGTAAAATTATTAGGGAGAT+TGG - chr1.2:64459029-64459048 None:intergenic 30.0%
TAAACAAGATTAAAGTGGTG+GGG + chr1.2:64459554-64459573 MS.gene07387:intron 30.0%
TATGATTAAGTAGTCACTAG+TGG + chr1.2:64459843-64459862 MS.gene07387:intron 30.0%
TGCATTATGAATTGTCAACT+TGG + chr1.2:64459591-64459610 MS.gene07387:intron 30.0%
! AACTCTAAAAGATCTCGTAT+AGG - chr1.2:64458880-64458899 None:intergenic 30.0%
! ATGGTGTTAACTATAAGATG+GGG - chr1.2:64459103-64459122 None:intergenic 30.0%
! CTGTAATTGATGAGAGTTTT+TGG + chr1.2:64460571-64460590 MS.gene07387:CDS 30.0%
! GATTTTTCATCTGTCACTAT+TGG + chr1.2:64460495-64460514 MS.gene07387:CDS 30.0%
! TATTAATTTGATCCTTCACG+AGG + chr1.2:64460128-64460147 MS.gene07387:intron 30.0%
!! GAATCAGAACGTTTGATTTT+TGG - chr1.2:64460417-64460436 None:intergenic 30.0%
!! GTTTTTGGATGTAAGATGTA+AGG - chr1.2:64458688-64458707 None:intergenic 30.0%
!!! CAATTTTTTCAGGCTTGTTA+AGG + chr1.2:64459227-64459246 MS.gene07387:intron 30.0%
AAACAAGATTAAAGTGGTGG+GGG + chr1.2:64459555-64459574 MS.gene07387:intron 35.0%
AGCAAAATTACCAGGAAGAA+CGG + chr1.2:64460302-64460321 MS.gene07387:CDS 35.0%
ATGAAGTTCATGGCACTTAA+TGG - chr1.2:64459122-64459141 None:intergenic 35.0%
CAAACTCGGAAACAAAGAAA+AGG + chr1.2:64460379-64460398 MS.gene07387:CDS 35.0%
GAAGCTAAACCAAACAAACT+CGG + chr1.2:64460365-64460384 MS.gene07387:CDS 35.0%
TAATCTTCATGAGTACTCTC+TGG - chr1.2:64460702-64460721 None:intergenic 35.0%
TACATGAAATGCTTGGAAAC+AGG + chr1.2:64459347-64459366 MS.gene07387:CDS 35.0%
TATATTACCACTTGCACCTA+AGG - chr1.2:64459716-64459735 None:intergenic 35.0%
TGAAAAGATGGGATTGAAGA+GGG + chr1.2:64458634-64458653 MS.gene07387:CDS 35.0%
TGTCACTATTGGTGAAAGAA+AGG + chr1.2:64460506-64460525 MS.gene07387:CDS 35.0%
TTAAGACCTGATATCAAGAG+AGG + chr1.2:64459286-64459305 MS.gene07387:CDS 35.0%
! TCTCTGGAAGAATTTCATCA+GGG - chr1.2:64460686-64460705 None:intergenic 35.0%
! TCTTTGTTTCCGAGTTTGTT+TGG - chr1.2:64460377-64460396 None:intergenic 35.0%
!! ATTTCATCAGGGTATTGAAG+TGG - chr1.2:64460675-64460694 None:intergenic 35.0%
AAAAACATGGCCATGGCAAT+TGG + chr1.2:64458702-64458721 MS.gene07387:CDS 40.0%
AAGTGAAGACATTGAGTCCA+TGG + chr1.2:64460536-64460555 MS.gene07387:CDS 40.0%
AGCTTCATGTGTCGTCTTAT+GGG - chr1.2:64459776-64459795 None:intergenic 40.0%
ATTTCATTGTCCGTTCTTCC+TGG - chr1.2:64460315-64460334 None:intergenic 40.0%
CATGAACTTCATAGCTCACA+AGG + chr1.2:64459130-64459149 MS.gene07387:intron 40.0%
CTTGTGAGCTATGAAGTTCA+TGG - chr1.2:64459132-64459151 None:intergenic 40.0%
GAAAAGATGGGATTGAAGAG+GGG + chr1.2:64458635-64458654 MS.gene07387:CDS 40.0%
GCAATTGCAGCAAAATTACC+AGG + chr1.2:64460294-64460313 MS.gene07387:CDS 40.0%
GCGAATCTCGTGGAAATATT+TGG + chr1.2:64460091-64460110 MS.gene07387:intron 40.0%
GTGAAAAGATGGGATTGAAG+AGG + chr1.2:64458633-64458652 MS.gene07387:CDS 40.0%
TACATCCAAAAACATGGCCA+TGG + chr1.2:64458695-64458714 MS.gene07387:CDS 40.0%
TAGATCTGTGATGTGCCTTA+GGG + chr1.2:64459956-64459975 MS.gene07387:intron 40.0%
TAGCTTCATGTGTCGTCTTA+TGG - chr1.2:64459777-64459796 None:intergenic 40.0%
TTAGATCTGTGATGTGCCTT+AGG + chr1.2:64459955-64459974 MS.gene07387:intron 40.0%
! AACAAGATTAAAGTGGTGGG+GGG + chr1.2:64459556-64459575 MS.gene07387:intron 40.0%
! AATCCCATCTTTTCACAGCA+AGG - chr1.2:64458629-64458648 None:intergenic 40.0%
! AATTGCCATGGCCATGTTTT+TGG - chr1.2:64458703-64458722 None:intergenic 40.0%
! CTCTCTGGAAGAATTTCATC+AGG - chr1.2:64460687-64460706 None:intergenic 40.0%
! TTCTAACTTGGATGATGGCA+TGG + chr1.2:64460725-64460744 MS.gene07387:CDS 40.0%
!! TGGATGATGGCATGGATTTT+TGG + chr1.2:64460733-64460752 MS.gene07387:CDS 40.0%
!! TTTCAGGCTTGTTAAGGTGT+GGG + chr1.2:64459233-64459252 MS.gene07387:intron 40.0%
!!! CGTCTTATGGGTGCATTTTT+TGG - chr1.2:64459764-64459783 None:intergenic 40.0%
!!! TTTTCAGGCTTGTTAAGGTG+TGG + chr1.2:64459232-64459251 MS.gene07387:intron 40.0%
AAAACTGAACGCGAATCTCG+TGG + chr1.2:64460081-64460100 MS.gene07387:intron 45.0%
ACAAGTGTAACACCTCGTGA+AGG - chr1.2:64460143-64460162 None:intergenic 45.0%
ATTACCACTTGCACCTAAGG+TGG - chr1.2:64459713-64459732 None:intergenic 45.0%
TCATCTTCCTCAAGAGACCA+AGG - chr1.2:64458662-64458681 None:intergenic 45.0%
TGAAGACATTGAGTCCATGG+AGG + chr1.2:64460539-64460558 MS.gene07387:CDS 45.0%
TGCAAGTACCTGCAAGCTTT+GGG - chr1.2:64458736-64458755 None:intergenic 45.0%
TTACCACTTGCACCTAAGGT+GGG - chr1.2:64459712-64459731 None:intergenic 45.0%
! AGCTCCTTGCTGTGAAAAGA+TGG + chr1.2:64458622-64458641 MS.gene07387:CDS 45.0%
! GCTCCTTGCTGTGAAAAGAT+GGG + chr1.2:64458623-64458642 MS.gene07387:CDS 45.0%
!! TACTTTATATAAAAAAAATT+GGG + chr1.2:64459167-64459186 MS.gene07387:intron 5.0%
!! TTACTTTATATAAAAAAAAT+TGG + chr1.2:64459166-64459185 MS.gene07387:intron 5.0%
ACTAGGTACGATCCCACCTT+AGG + chr1.2:64459697-64459716 MS.gene07387:intron 50.0%
ATCTGTGATGTGCCTTAGGG+TGG + chr1.2:64459959-64459978 MS.gene07387:intron 50.0%
CTGCAAGTACCTGCAAGCTT+TGG - chr1.2:64458737-64458756 None:intergenic 50.0%
GGAAAAGCTGCAGACTTAGG+TGG + chr1.2:64459254-64459273 MS.gene07387:CDS 50.0%
GTGGGAAAAGCTGCAGACTT+AGG + chr1.2:64459251-64459270 MS.gene07387:CDS 50.0%
TACAGCCATTGTCTCCTCCA+TGG - chr1.2:64460556-64460575 None:intergenic 50.0%
TGAGTCCATGGAGGAGACAA+TGG + chr1.2:64460548-64460567 MS.gene07387:CDS 50.0%
TGCCATAAACTGCCACCCTA+AGG - chr1.2:64459974-64459993 None:intergenic 50.0%
TGCCTTAGGGTGGCAGTTTA+TGG + chr1.2:64459969-64459988 MS.gene07387:intron 50.0%
TTGGTCAGAAGCAGCAGCAT+TGG + chr1.2:64460590-64460609 MS.gene07387:CDS 50.0%
! ATTAAAGTGGTGGGGGGCTA+GGG + chr1.2:64459562-64459581 MS.gene07387:intron 50.0%
!! AAGTACCTGCAAGCTTTGGG+AGG - chr1.2:64458733-64458752 None:intergenic 50.0%
!! AGTACCTGCAAGCTTTGGGA+GGG - chr1.2:64458732-64458751 None:intergenic 50.0%
GATCCCACCTTAGGTGCAAG+TGG + chr1.2:64459706-64459725 MS.gene07387:intron 55.0%
TGGGATTGAAGAGGGGTCCT+TGG + chr1.2:64458642-64458661 MS.gene07387:CDS 55.0%
! GATTAAAGTGGTGGGGGGCT+AGG + chr1.2:64459561-64459580 MS.gene07387:intron 55.0%
GAGGGGTCCTTGGTCTCTTG+AGG + chr1.2:64458652-64458671 MS.gene07387:CDS 60.0%
CGTGCCCTCCCAAAGCTTGC+AGG + chr1.2:64458725-64458744 MS.gene07387:CDS 65.0%
! GGAGGGCACGCCAATTGCCA+TGG - chr1.2:64458715-64458734 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 64458614 64460806 64458614 ID=MS.gene07387
chr1.2 mRNA 64458614 64460806 64458614 ID=MS.gene07387.t1;Parent=MS.gene07387
chr1.2 exon 64458614 64458746 64458614 ID=MS.gene07387.t1.exon1;Parent=MS.gene07387.t1
chr1.2 CDS 64458614 64458746 64458614 ID=cds.MS.gene07387.t1;Parent=MS.gene07387.t1
chr1.2 exon 64459239 64459368 64459239 ID=MS.gene07387.t1.exon2;Parent=MS.gene07387.t1
chr1.2 CDS 64459239 64459368 64459239 ID=cds.MS.gene07387.t1;Parent=MS.gene07387.t1
chr1.2 exon 64460287 64460806 64460287 ID=MS.gene07387.t1.exon3;Parent=MS.gene07387.t1
chr1.2 CDS 64460287 64460806 64460287 ID=cds.MS.gene07387.t1;Parent=MS.gene07387.t1
Gene Sequence

>MS.gene07387

ATGGTAAGAGCTCCTTGCTGTGAAAAGATGGGATTGAAGAGGGGTCCTTGGTCTCTTGAGGAAGATGAAATCCTTACATCTTACATCCAAAAACATGGCCATGGCAATTGGCGTGCCCTCCCAAAGCTTGCAGGTACTTGCAGTCTATCTATCTATATTTTAAGAAAAATCTTTCATGTAACATAGGTTAAAAAATCTTTCAAGTAATATATATAGGAAATTTCACACATCTATTTTCCATCAATTTTTTACATTAGTGTAATCCTATACGAGATCTTTTAGAGTTCAAGTGTGAGTGATTTAGTTTCACATCTACTATGCGAAAAGTGTTAGATATACAAAAGAGGTGATTCATAATATCTAATGTCTTAAGGTTTTAAGCGGAGATTTAGTGTCTTCTCGCGACGCTTCACCAATCTCCCTAATAATTTTACCTAGTTTTAATTTAACAAACATCAAACTTGTGACATTTGTTTGACAAGACTACCCCATCTTATAGTTAACACCATTAAGTGCCATGAACTTCATAGCTCACAAGGTTTCTTGCATTTTTTACTTTATATAAAAAAAATTGGGATGATTTGGTAATGTTATGTGTACTAATTTTTTTTATCAATTTTTTCAGGCTTGTTAAGGTGTGGGAAAAGCTGCAGACTTAGGTGGATTAACTATTTAAGACCTGATATCAAGAGAGGAAATTTTACAAATGAAGAAGAGGAAAATATCATTAAGCTACATGAAATGCTTGGAAACAGGTATTAATTCATGTTAATATCTTCTCATCAAAAAGCTTAACAAGTCCAATTTTTAATTTACATGATTGCTTGTCCTAATCAACATGTTCTGTTTATGATAATATAAATGTTTGATTCATGATTGTATATTTATTTAAGTAAGAAATGGATTTGGATTCATCCATCTTTTCTTTTTCTCTAATTGATAAACAAGATTAAAGTGGTGGGGGGCTAGGGACCATATGCATTATGAATTGTCAACTTGGAACAAAATTAAAATCAAAAGGTTGTGTATACTAAATATAATGGATGTCGTTATAATATAGTGCCTTTAATTCTACTTTTAAAAACTAGGTACGATCCCACCTTAGGTGCAAGTGGTAATATAAAAAGTAAAGGAAAAATTGATGTATCCAAAAAATGCACCCATAAGACGACACATGAAGCTATAAACCTATAATTAATTATGTACCATCATGAAATAATACAAAACAGTATGATTAAGTAGTCACTAGTGGAAATATAGAAAAGTTAATCTATAATAATAACATTAGACAAGTAAATAATTATTATAAAAAAATGTGAGTTGCAACTTCAAGAATCTTGATTAGATCTGTGATGTGCCTTAGGGTGGCAGTTTATGGCACATGCAATATTCATAAGATTCACTCTGTCAGTGTAATCTCTTAAGACAGTATCAAATTTTGTTGTTTTCTGATTCATTGCAATAAACAAAACTGAACGCGAATCTCGTGGAAATATTTGGTATATGACTATATATATTAATTTGATCCTTCACGAGGTGTTACACTTGTACATTTTAATCTCAAATTGACATAATTTAAATTCTCTCTGGGACGATCGTAAAATAATCATTAATGTATTCGAGTTAATAATAATTTTTTTGAAAAAGTTAATTAATTGAATTATTATTTCTAGGTGGTCGGCAATTGCAGCAAAATTACCAGGAAGAACGGACAATGAAATAAAAAATGTGTGGCACACACATTTGAAGAAGAAGCTAAACCAAACAAACTCGGAAACAAAGAAAAGGGTGATCTCAAAACCAAAAATCAAACGTTCTGATTCAAATTCAAGCACAATAACACAATCAGAATCAGCATCTGCATGCACTACAAGTTCTAGTGATTTTTCATCTGTCACTATTGGTGAAAGAAAGGATATAAAAAGTGAAGACATTGAGTCCATGGAGGAGACAATGGCTGTAATTGATGAGAGTTTTTGGTCAGAAGCAGCAGCATTGGATGAAACTTCAACTGATATGAAATCAAGTTCTCCATTGACAATCTCAAATGAAATGTTGCCACTTCAATACCCTGATGAAATTCTTCCAGAGAGTACTCATGAAGATTATAATTCTAACTTGGATGATGGCATGGATTTTTGGTATGATATATTTATTAGGACTGGAGATCAAATAGAATTGCCTGAGTTTTGA

Protein sequence

>MS.gene07387.t1

MVRAPCCEKMGLKRGPWSLEEDEILTSYIQKHGHGNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTNEEEENIIKLHEMLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKKLNQTNSETKKRVISKPKIKRSDSNSSTITQSESASACTTSSSDFSSVTIGERKDIKSEDIESMEETMAVIDESFWSEAAALDETSTDMKSSSPLTISNEMLPLQYPDEILPESTHEDYNSNLDDGMDFWYDIFIRTGDQIELPEF