Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073936.t1 | XP_003590183.2 | 96.7 | 1077 | 31 | 1 | 1 | 1072 | 61 | 1137 | 0.00E+00 | 2095.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073936.t1 | Q84LK0 | 67.8 | 1068 | 321 | 4 | 4 | 1070 | 62 | 1107 | 0.0e+00 | 1452.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073936.t1 | G7I6Q0 | 96.7 | 1077 | 31 | 1 | 1 | 1072 | 61 | 1137 | 0.0e+00 | 2095.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049351 | MS.gene073936 | 0.811376 | 7.22E-51 | -1.69E-46 |
| MS.gene058660 | MS.gene073936 | 0.802365 | 5.81E-49 | -1.69E-46 |
| MS.gene059688 | MS.gene073936 | 0.800253 | 1.57E-48 | -1.69E-46 |
| MS.gene059711 | MS.gene073936 | 0.839986 | 1.14E-57 | -1.69E-46 |
| MS.gene059974 | MS.gene073936 | 0.80315 | 4.00E-49 | -1.69E-46 |
| MS.gene060818 | MS.gene073936 | 0.809956 | 1.46E-50 | -1.69E-46 |
| MS.gene060837 | MS.gene073936 | 0.808488 | 3.02E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 250 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTATGTATATGGACTTAT+TGG | 0.082800 | 1.4:-30155426 | MS.gene073936:CDS |
| TTTGAAATAACCTTGAATTT+TGG | 0.143407 | 1.4:+30152805 | None:intergenic |
| CATCAGCTATATTGCTTAAT+AGG | 0.169046 | 1.4:+30144039 | None:intergenic |
| TAACCGTGTCTTCGGGAAAT+AGG | 0.174632 | 1.4:-30153825 | MS.gene073936:CDS |
| AAGATAAAGTGTTTCTTAAT+TGG | 0.179571 | 1.4:-30145146 | MS.gene073936:CDS |
| GTAGATGTTCCAAGAGTTAA+AGG | 0.212866 | 1.4:+30153796 | None:intergenic |
| CTTTGGTTCTCAGGTATGTT+AGG | 0.214976 | 1.4:-30152865 | MS.gene073936:intron |
| CGACCCTGTTTCTGATCTTT+TGG | 0.234521 | 1.4:-30154012 | MS.gene073936:CDS |
| TGATCACAAAAGTTCATTTC+AGG | 0.235726 | 1.4:-30147347 | MS.gene073936:intron |
| TATAGACTACCTCAAGCTTC+TGG | 0.239162 | 1.4:+30148452 | None:intergenic |
| GATAAAGATCTTCAGCTCTT+TGG | 0.239855 | 1.4:+30145408 | None:intergenic |
| CTTGGAACATCTACTCAAAT+TGG | 0.241948 | 1.4:-30153787 | MS.gene073936:intron |
| GATGGTAAGCATCGGAATTT+TGG | 0.243574 | 1.4:-30144020 | MS.gene073936:CDS |
| AAGCATGATAGAGTCAAAAT+AGG | 0.256430 | 1.4:+30147396 | None:intergenic |
| ATCTGATACTCTGAGTTTCT+TGG | 0.256725 | 1.4:+30158252 | None:intergenic |
| AGATATAAAACGACGTTTCT+TGG | 0.262650 | 1.4:+30155642 | None:intergenic |
| ACTTGGGATATGTGGACTTA+TGG | 0.268862 | 1.4:-30147443 | MS.gene073936:CDS |
| TTCTTGGTTCGAGCTTGAGC+TGG | 0.277875 | 1.4:+30155658 | None:intergenic |
| GAAATATTGAAACATTTAAT+TGG | 0.278079 | 1.4:-30151550 | MS.gene073936:CDS |
| TTGCCTTGACATTTGCTTCA+TGG | 0.279311 | 1.4:+30149313 | None:intergenic |
| CTTGATAGAAGTGGCTGTTT+GGG | 0.282969 | 1.4:-30145620 | MS.gene073936:CDS |
| TTCTTTGGTTTCAGAATCTT+AGG | 0.288160 | 1.4:-30155948 | MS.gene073936:intron |
| TGATTAGCAGAGTTTCTATT+TGG | 0.293781 | 1.4:+30144084 | None:intergenic |
| TTCCTGGAACTAGGAAATAA+AGG | 0.294559 | 1.4:+30144120 | None:intergenic |
| CAAGGCAAACACTAGAGTTT+TGG | 0.296309 | 1.4:-30149298 | MS.gene073936:CDS |
| TTCCTTTATTTCCTAGTTCC+AGG | 0.297039 | 1.4:-30144122 | MS.gene073936:CDS |
| CCAGGAAATCCCTATGTATA+TGG | 0.297064 | 1.4:-30155435 | MS.gene073936:CDS |
| ATCAATGGTAATAATTCTAA+TGG | 0.303527 | 1.4:-30145317 | MS.gene073936:CDS |
| GGTCCCACGTGGGTGGCTAC+TGG | 0.307487 | 1.4:-30151529 | MS.gene073936:CDS |
| GAATCCTTTACTCACAATAT+TGG | 0.308722 | 1.4:+30153624 | None:intergenic |
| AACGCTTTATACCAAATATA+TGG | 0.309972 | 1.4:-30149563 | MS.gene073936:CDS |
| CCTATGTATATGGACTTATT+GGG | 0.310239 | 1.4:-30155425 | MS.gene073936:CDS |
| CACAACAGGGCAACCAGCTC+TGG | 0.320896 | 1.4:+30156485 | None:intergenic |
| ACGTCCAAGTGGGCAGAATT+TGG | 0.331384 | 1.4:-30154092 | MS.gene073936:CDS |
| ACCACACTGCTTCCTGTTCC+CGG | 0.334290 | 1.4:+30149595 | None:intergenic |
| CCATATACATAGGGATTTCC+TGG | 0.337764 | 1.4:+30155435 | None:intergenic |
| TTCTGAAGAATATGTCTTCA+TGG | 0.338718 | 1.4:+30154621 | None:intergenic |
| GCAAAAGGGACTTGCATTGC+AGG | 0.339981 | 1.4:-30145659 | MS.gene073936:CDS |
| AACAAGCACAAGGCTCCTTT+TGG | 0.344950 | 1.4:+30145709 | None:intergenic |
| ATTTGTGCTGCTGCACTACT+TGG | 0.350396 | 1.4:-30147460 | MS.gene073936:CDS |
| TCTACAAAGTTCAATATGAT+TGG | 0.351830 | 1.4:+30151627 | None:intergenic |
| TCTTGATAGAAGTGGCTGTT+TGG | 0.356538 | 1.4:-30145621 | MS.gene073936:CDS |
| TCTGCTATGTTGAACCAATA+TGG | 0.360428 | 1.4:+30147574 | None:intergenic |
| AACCGTGTCTTCGGGAAATA+GGG | 0.360958 | 1.4:-30153824 | MS.gene073936:CDS |
| TTCTGGGATTCTACTATTGT+AGG | 0.364870 | 1.4:+30148469 | None:intergenic |
| TCCTCATGTGAAACTTCAAT+TGG | 0.370921 | 1.4:+30145248 | None:intergenic |
| GGGGTACCAGTCCATATATT+TGG | 0.374561 | 1.4:+30149552 | None:intergenic |
| GGATTTCTGCTATAAAATCT+TGG | 0.385444 | 1.4:+30145198 | None:intergenic |
| CAGTGTAACATGCTCAATTC+CGG | 0.387233 | 1.4:-30152624 | MS.gene073936:CDS |
| AGACATTCTGAATGGTTTGA+TGG | 0.391680 | 1.4:-30154035 | MS.gene073936:CDS |
| TCGTAACGTAACCGTGTCTT+CGG | 0.393490 | 1.4:-30153833 | MS.gene073936:CDS |
| AGGGAGAAATATCTTATTCC+CGG | 0.394099 | 1.4:-30149614 | MS.gene073936:CDS |
| TAGTTGGTTTATTACCATAT+TGG | 0.395583 | 1.4:-30147588 | MS.gene073936:CDS |
| CCTACGTAGAGTTTCTTATC+TGG | 0.396333 | 1.4:+30145062 | None:intergenic |
| TTTGGTTCTCAGGTATGTTA+GGG | 0.397494 | 1.4:-30152864 | MS.gene073936:intron |
| TTTGGTGGTTCCAGCAATGA+TGG | 0.398897 | 1.4:+30145727 | None:intergenic |
| TGCAGAAAACTATGCAAAAC+AGG | 0.403387 | 1.4:-30145357 | MS.gene073936:CDS |
| ATAGACTACCTCAAGCTTCT+GGG | 0.407010 | 1.4:+30148453 | None:intergenic |
| GTGAAGGGAGAAGAAGGAAA+TGG | 0.407787 | 1.4:-30148498 | MS.gene073936:CDS |
| ATGGGCACAACTTGCATTGA+TGG | 0.412451 | 1.4:-30145527 | MS.gene073936:CDS |
| AGGGCTCAACCTTTAACTCT+TGG | 0.413129 | 1.4:-30153805 | MS.gene073936:CDS |
| CGTAACGTAACCGTGTCTTC+GGG | 0.413318 | 1.4:-30153832 | MS.gene073936:CDS |
| TGTTTAATTTGTTCCTCTCC+AGG | 0.418327 | 1.4:+30149531 | None:intergenic |
| TGGAATACCTTCTTTGTTGA+AGG | 0.419005 | 1.4:-30153676 | MS.gene073936:CDS |
| GAACTTCGATCCATCATTGC+TGG | 0.422226 | 1.4:-30145737 | MS.gene073936:CDS |
| ATCAAACCATTCAGAATGTC+TGG | 0.427480 | 1.4:+30154037 | None:intergenic |
| TTGACCAAAAGATCAGAAAC+AGG | 0.429669 | 1.4:+30154008 | None:intergenic |
| TCAATTAGATTCATTGTTGA+GGG | 0.430073 | 1.4:+30158033 | None:intergenic |
| CTTGATTTACCACCACCATT+TGG | 0.431025 | 1.4:+30147496 | None:intergenic |
| GGAGACTTCTATGAAACTCT+TGG | 0.431107 | 1.4:-30156579 | MS.gene073936:CDS |
| TTCAATATTTCATTGAGCTC+AGG | 0.431501 | 1.4:+30151562 | None:intergenic |
| CTTGAATACTCAAATTTGCT+TGG | 0.433294 | 1.4:-30158006 | MS.gene073936:CDS |
| ACATAGGTAAAGGAGCTCTA+TGG | 0.435253 | 1.4:-30153877 | MS.gene073936:intron |
| AATATCTTATTCCCGGGAAC+AGG | 0.435984 | 1.4:-30149607 | MS.gene073936:CDS |
| TGAAGGGAGAAGAAGGAAAT+GGG | 0.436793 | 1.4:-30148497 | MS.gene073936:CDS |
| TTGAGGATATGGAGTCTGTA+TGG | 0.437197 | 1.4:-30149884 | MS.gene073936:CDS |
| CCTACTACAGGCATAGGTTC+TGG | 0.437803 | 1.4:+30155381 | None:intergenic |
| TTCACCAAATTCTGCCCACT+TGG | 0.439880 | 1.4:+30154088 | None:intergenic |
| GTCTCAACTTAGAGCTCCTA+AGG | 0.447138 | 1.4:-30149634 | MS.gene073936:CDS |
| TCAGAATCTTAGGCAAACTT+TGG | 0.447427 | 1.4:-30155938 | MS.gene073936:intron |
| CAATCATTATTTCTATTGAC+AGG | 0.448373 | 1.4:-30147520 | MS.gene073936:CDS |
| TAGCAGAGTTTCTATTTGGC+AGG | 0.450010 | 1.4:+30144088 | None:intergenic |
| TATTTCTGCATACATCTTTG+AGG | 0.450139 | 1.4:-30154540 | MS.gene073936:CDS |
| GAGATTGCATCCAAAATTCA+AGG | 0.450407 | 1.4:-30152815 | MS.gene073936:intron |
| TATGCGGGTTTAAATCCCTT+TGG | 0.450508 | 1.4:-30156531 | MS.gene073936:CDS |
| CTCAGGAATTCCTTCCCTCT+TGG | 0.450796 | 1.4:+30145439 | None:intergenic |
| GGAAGCCTCGATTCGGAAGT+TGG | 0.454853 | 1.4:+30144060 | None:intergenic |
| AAACATGCTTTAGATTCTAA+AGG | 0.460656 | 1.4:-30149504 | MS.gene073936:CDS |
| AGCATGATAGAGTCAAAATA+GGG | 0.468162 | 1.4:+30147397 | None:intergenic |
| TCTTGGTTCGAGCTTGAGCT+GGG | 0.468735 | 1.4:+30155659 | None:intergenic |
| GAATAAGATATTTCTCCCTT+AGG | 0.469726 | 1.4:+30149618 | None:intergenic |
| GATTCTAAAGGTAGAAAGGT+AGG | 0.469843 | 1.4:-30149492 | MS.gene073936:CDS |
| CGAGGAACAGAGACTGCAAA+AGG | 0.471698 | 1.4:-30145674 | MS.gene073936:CDS |
| AGCAATGATGGATCGAAGTT+CGG | 0.472676 | 1.4:+30145739 | None:intergenic |
| GCTCTTTGGATAACAATCTC+AGG | 0.474099 | 1.4:+30145422 | None:intergenic |
| GTCCCACGTGGGTGGCTACT+GGG | 0.474837 | 1.4:-30151528 | MS.gene073936:CDS |
| TCAATGGTAATAATTCTAAT+GGG | 0.475596 | 1.4:-30145316 | MS.gene073936:CDS |
| TTCAATTAGATTCATTGTTG+AGG | 0.475786 | 1.4:+30158032 | None:intergenic |
| AATCGCAAGATGAAGATAGT+TGG | 0.476644 | 1.4:-30147604 | MS.gene073936:CDS |
| CGTGCACATCGATCGAAAGA+AGG | 0.477385 | 1.4:-30144161 | MS.gene073936:CDS |
| ATAGATTCTAATTTGAAGAA+TGG | 0.478962 | 1.4:-30157982 | MS.gene073936:CDS |
| TTTAGATTCTAAAGGTAGAA+AGG | 0.482930 | 1.4:-30149496 | MS.gene073936:CDS |
| CACATGAGCATATAACGCTT+TGG | 0.483246 | 1.4:+30149197 | None:intergenic |
| GAGTTTCTATTTGGCAGGCC+AGG | 0.484016 | 1.4:+30144093 | None:intergenic |
| GAAGAAACACACGTAAATTC+CGG | 0.487982 | 1.4:+30152605 | None:intergenic |
| TCTTAATTGGCACTAGGGAA+TGG | 0.489576 | 1.4:-30145133 | MS.gene073936:CDS |
| GATTGACGAAGTAATATCTC+TGG | 0.490505 | 1.4:-30149961 | MS.gene073936:CDS |
| AGGAATTTCTCATTCGGCAA+GGG | 0.490800 | 1.4:-30154671 | MS.gene073936:CDS |
| GCTGCACTACTTGGGATATG+TGG | 0.491552 | 1.4:-30147451 | MS.gene073936:CDS |
| GGAATCACGGCGGATTCAGC+AGG | 0.494688 | 1.4:+30147418 | None:intergenic |
| GAGACTTCTATGAAACTCTT+GGG | 0.495809 | 1.4:-30156578 | MS.gene073936:CDS |
| CCCAATAAGTCCATATACAT+AGG | 0.496515 | 1.4:+30155425 | None:intergenic |
| TTGGATGCAATCTCATAAGA+AGG | 0.501103 | 1.4:+30152824 | None:intergenic |
| GTTTAATTTGTTCCTCTCCA+GGG | 0.501339 | 1.4:+30149532 | None:intergenic |
| ATGGACAAACAAAACCTACT+TGG | 0.502117 | 1.4:-30145508 | MS.gene073936:CDS |
| ACTTTCAGGCATGCTCATCC+AGG | 0.506081 | 1.4:-30155453 | MS.gene073936:intron |
| AAGTAAGCACATCATTTATG+TGG | 0.507055 | 1.4:+30149841 | None:intergenic |
| AAGATCTTTCTCACATATTG+TGG | 0.507630 | 1.4:-30158213 | MS.gene073936:CDS |
| ATCTGATCGTAGACCGCCAA+AGG | 0.508138 | 1.4:+30156515 | None:intergenic |
| GTGTTTCTTAATTGGCACTA+GGG | 0.508539 | 1.4:-30145138 | MS.gene073936:CDS |
| CCACACTGCTTCCTGTTCCC+GGG | 0.508620 | 1.4:+30149596 | None:intergenic |
| CCAGAACCTATGCCTGTAGT+AGG | 0.508789 | 1.4:-30155381 | MS.gene073936:intron |
| GCGGGTTTAAATCCCTTTGG+CGG | 0.509226 | 1.4:-30156528 | MS.gene073936:CDS |
| ACAGGAAGCAGTGTGGTTCA+AGG | 0.510474 | 1.4:-30149589 | MS.gene073936:CDS |
| TTGGATGATCTTACACGCAA+TGG | 0.510915 | 1.4:-30155919 | MS.gene073936:CDS |
| TGTTTGTGCAGTCTGAAGGC+AGG | 0.511359 | 1.4:-30156887 | MS.gene073936:intron |
| AACACTGTACACAAAGCAAT+GGG | 0.511529 | 1.4:-30145545 | MS.gene073936:CDS |
| AGTGTTTCTTAATTGGCACT+AGG | 0.513671 | 1.4:-30145139 | MS.gene073936:CDS |
| GTAGTTCCAGACATTCTGAA+TGG | 0.514478 | 1.4:-30154043 | MS.gene073936:CDS |
| CACTAGGGAATGGCCACCCC+CGG | 0.516802 | 1.4:-30145123 | MS.gene073936:CDS |
| TTTCTATTGACAGGACCAAA+TGG | 0.518729 | 1.4:-30147511 | MS.gene073936:CDS |
| TTTAATTTGTTCCTCTCCAG+GGG | 0.519994 | 1.4:+30149533 | None:intergenic |
| CTTAATAGGAAGCCTCGATT+CGG | 0.520072 | 1.4:+30144053 | None:intergenic |
| AGTAAGACCTTCAACAAAGA+AGG | 0.520985 | 1.4:+30153669 | None:intergenic |
| TTCTCACATATTGTGGTGGA+AGG | 0.527521 | 1.4:-30158206 | MS.gene073936:CDS |
| AGGTGGAGGCCGCCTTATCA+AGG | 0.528089 | 1.4:-30149446 | MS.gene073936:intron |
| AATATGTCTTCATGGTCTCT+AGG | 0.529158 | 1.4:+30154629 | None:intergenic |
| CTTGCAGTGAAGGGAGAAGA+AGG | 0.529921 | 1.4:-30148504 | MS.gene073936:intron |
| ACAACAGGGCAACCAGCTCT+GGG | 0.532588 | 1.4:+30156486 | None:intergenic |
| TGTATTGTGGAGGAAGTTCA+AGG | 0.534291 | 1.4:-30155682 | MS.gene073936:CDS |
| AATTGAAGTTTCACATGAGG+AGG | 0.535305 | 1.4:-30145246 | MS.gene073936:CDS |
| TACGTGTGTTTCTTCAGCAA+AGG | 0.535657 | 1.4:-30152597 | MS.gene073936:intron |
| ATTCTAATTTGAAGAATGGA+AGG | 0.536629 | 1.4:-30157978 | MS.gene073936:intron |
| TCAGGTGTCATTCCGACGGA+TGG | 0.539058 | 1.4:-30153696 | MS.gene073936:intron |
| TTTGAAACTGCCAAGAGGGA+AGG | 0.541249 | 1.4:-30145449 | MS.gene073936:CDS |
| CCAATAAGTCCATATACATA+GGG | 0.541341 | 1.4:+30155426 | None:intergenic |
| TCGATCGAAAGAAGGGATGC+AGG | 0.546225 | 1.4:-30144153 | MS.gene073936:CDS |
| ATTGAAACTCTTGATAGAAG+TGG | 0.546230 | 1.4:-30145629 | MS.gene073936:CDS |
| TTCATCAGGAATAGCAGAGA+AGG | 0.546650 | 1.4:+30149911 | None:intergenic |
| CAACAATGAATCTAATTGAA+AGG | 0.547593 | 1.4:-30158029 | MS.gene073936:CDS |
| CAGAGCTGGTTGCCCTGTTG+TGG | 0.547718 | 1.4:-30156484 | MS.gene073936:intron |
| AGACATTGACTTCAAAACCT+TGG | 0.551104 | 1.4:-30151503 | MS.gene073936:intron |
| CCATCTTGCAGCATCCAAGT+AGG | 0.551358 | 1.4:+30145494 | None:intergenic |
| TCAGATAGCATCCCCAGAGC+TGG | 0.552374 | 1.4:-30156498 | MS.gene073936:CDS |
| TGCTAAGCTACTTGAATGGA+AGG | 0.553515 | 1.4:-30151653 | MS.gene073936:CDS |
| TTTGTGCTGCTGCACTACTT+GGG | 0.553681 | 1.4:-30147459 | MS.gene073936:CDS |
| CTTGAAGAGCCTATAGTCAC+CGG | 0.554049 | 1.4:+30145104 | None:intergenic |
| GTCCTCAGCTGCTTTGTCCA+CGG | 0.556624 | 1.4:+30149818 | None:intergenic |
| GTGCACATCGATCGAAAGAA+GGG | 0.558891 | 1.4:-30144160 | MS.gene073936:CDS |
| CAGGAAGCAGTGTGGTTCAA+GGG | 0.561932 | 1.4:-30149588 | MS.gene073936:CDS |
| CCTACTTGGATGCTGCAAGA+TGG | 0.562471 | 1.4:-30145494 | MS.gene073936:CDS |
| TGTATTCTAGTTGAATATGC+GGG | 0.564114 | 1.4:-30156546 | MS.gene073936:CDS |
| TTCTGCATACATCTTTGAGG+AGG | 0.564693 | 1.4:-30154537 | MS.gene073936:CDS |
| TTGTATTCTAGTTGAATATG+CGG | 0.566102 | 1.4:-30156547 | MS.gene073936:CDS |
| TTTATACCAAATATATGGAC+TGG | 0.566964 | 1.4:-30149558 | MS.gene073936:CDS |
| TTGATAGAAGTGGCTGTTTG+GGG | 0.567646 | 1.4:-30145619 | MS.gene073936:CDS |
| TGGGCAGAATTTGGTGAAGG+GGG | 0.568706 | 1.4:-30154083 | MS.gene073936:CDS |
| GTAGAAAGGTAGGTGAGGAA+TGG | 0.569613 | 1.4:-30149482 | MS.gene073936:CDS |
| GGGAGAAATATCTTATTCCC+GGG | 0.571092 | 1.4:-30149613 | MS.gene073936:CDS |
| GAATTGTCTAGTTACATCAA+TGG | 0.571307 | 1.4:-30145332 | MS.gene073936:CDS |
| AAGGAATTTCTCATTCGGCA+AGG | 0.571429 | 1.4:-30154672 | MS.gene073936:CDS |
| ATCTTTCTCACATATTGTGG+TGG | 0.573646 | 1.4:-30158210 | MS.gene073936:CDS |
| CTATTAAGCAATATAGCTGA+TGG | 0.576801 | 1.4:-30144038 | MS.gene073936:CDS |
| AAACACTGTACACAAAGCAA+TGG | 0.576970 | 1.4:-30145546 | MS.gene073936:CDS |
| AGCCCTATTTCCCGAAGACA+CGG | 0.578819 | 1.4:+30153822 | None:intergenic |
| TTGAAGAGCCTATAGTCACC+GGG | 0.579926 | 1.4:+30145105 | None:intergenic |
| AAATGATGTGCTTACTTCCG+TGG | 0.579926 | 1.4:-30149835 | MS.gene073936:CDS |
| AACATTTAATTGGTCCCACG+TGG | 0.581952 | 1.4:-30151540 | MS.gene073936:CDS |
| AAGTGGGCAGAATTTGGTGA+AGG | 0.584310 | 1.4:-30154086 | MS.gene073936:CDS |
| TCATTGCTGGAACCACCAAA+AGG | 0.587905 | 1.4:-30145724 | MS.gene073936:CDS |
| TTCCGTGGACAAAGCAGCTG+AGG | 0.588630 | 1.4:-30149820 | MS.gene073936:CDS |
| AATATATGGACTGGTACCCC+TGG | 0.588784 | 1.4:-30149549 | MS.gene073936:CDS |
| TTACTTCCACCACATTGCAG+TGG | 0.589221 | 1.4:-30153651 | MS.gene073936:CDS |
| TCCAATTGAAGTTTCACATG+AGG | 0.589411 | 1.4:-30145249 | MS.gene073936:CDS |
| TCACATATTGTGGTGGAAGG+AGG | 0.590137 | 1.4:-30158203 | MS.gene073936:intron |
| GTGGTAAATCAAGTTTACTT+CGG | 0.593011 | 1.4:-30147486 | MS.gene073936:CDS |
| AGAGTCAAAATAGGGAATCA+CGG | 0.597474 | 1.4:+30147405 | None:intergenic |
| CTATGTATATGGACTTATTG+GGG | 0.597957 | 1.4:-30155424 | MS.gene073936:CDS |
| TAAAGGTAGAAAGGTAGGTG+AGG | 0.597978 | 1.4:-30149487 | MS.gene073936:CDS |
| GGAATTTCTCATTCGGCAAG+GGG | 0.600989 | 1.4:-30154670 | MS.gene073936:CDS |
| CTGCAGAGTAAAACTTGACG+TGG | 0.603855 | 1.4:+30156824 | None:intergenic |
| AGTGGGCAGAATTTGGTGAA+GGG | 0.606015 | 1.4:-30154085 | MS.gene073936:CDS |
| TTCATACCTACTACAGGCAT+AGG | 0.606169 | 1.4:+30155375 | None:intergenic |
| CATCTCAGGTGTCATTCCGA+CGG | 0.606918 | 1.4:-30153700 | MS.gene073936:intron |
| GCTCTATGGTCTTGATCATG+AGG | 0.608538 | 1.4:-30153863 | MS.gene073936:CDS |
| AGATTGCTAAGCTACTTGAA+TGG | 0.611550 | 1.4:-30151657 | MS.gene073936:CDS |
| TATTGGTTCAACATAGCAGA+AGG | 0.611717 | 1.4:-30147571 | MS.gene073936:CDS |
| GTGGGCAGAATTTGGTGAAG+GGG | 0.613445 | 1.4:-30154084 | MS.gene073936:CDS |
| ATCAACCAACTTCCGAATCG+AGG | 0.616628 | 1.4:-30144065 | MS.gene073936:CDS |
| ATGTATGCAGAAATAAGTGA+TGG | 0.616639 | 1.4:+30154548 | None:intergenic |
| GAGGAACAGAGACTGCAAAA+GGG | 0.616780 | 1.4:-30145673 | MS.gene073936:CDS |
| TTTAATTGGTCCCACGTGGG+TGG | 0.617159 | 1.4:-30151536 | MS.gene073936:CDS |
| AGTAGAATCCCAGAAGCTTG+AGG | 0.618095 | 1.4:-30148461 | MS.gene073936:intron |
| ATGGTTTACCACTACGAAGG+TGG | 0.620328 | 1.4:-30149463 | MS.gene073936:CDS |
| TACACGCAATGGTTATTCAG+TGG | 0.620651 | 1.4:-30155908 | MS.gene073936:intron |
| ATGCAGTTACGCGTAAACGT+TGG | 0.622224 | 1.4:+30143992 | None:intergenic |
| TTTGTCTTGACAGTGTATTG+TGG | 0.626135 | 1.4:-30155695 | MS.gene073936:intron |
| TTGACAGGACCAAATGGTGG+TGG | 0.627465 | 1.4:-30147505 | MS.gene073936:CDS |
| AAAGAAGGTATTCCATCCGT+CGG | 0.632398 | 1.4:+30153684 | None:intergenic |
| GATGCAATCTCATAAGAAGG+AGG | 0.635557 | 1.4:+30152827 | None:intergenic |
| TCTGATCGTAGACCGCCAAA+GGG | 0.635573 | 1.4:+30156516 | None:intergenic |
| GACGAAGTAATATCTCTGGA+TGG | 0.636880 | 1.4:-30149957 | MS.gene073936:CDS |
| ATATAGCTGATGGTAAGCAT+CGG | 0.637167 | 1.4:-30144028 | MS.gene073936:CDS |
| GTACCATGAAGCAAATGTCA+AGG | 0.637451 | 1.4:-30149316 | MS.gene073936:CDS |
| GGGCAGAATTTGGTGAAGGG+GGG | 0.640513 | 1.4:-30154082 | MS.gene073936:CDS |
| GATATGGAGTCTGTATGGAA+AGG | 0.640527 | 1.4:-30149879 | MS.gene073936:CDS |
| ATGGACTGGTACCCCTGGAG+AGG | 0.642746 | 1.4:-30149544 | MS.gene073936:CDS |
| GTCTTGACAGTGTATTGTGG+AGG | 0.642804 | 1.4:-30155692 | MS.gene073936:intron |
| GTTTACCACTACGAAGGTGG+AGG | 0.643110 | 1.4:-30149460 | MS.gene073936:CDS |
| AAGCGTTATATGCTCATGTG+AGG | 0.646209 | 1.4:-30149194 | MS.gene073936:intron |
| TCTTTGAGGAGGAATTCTTG+TGG | 0.648468 | 1.4:-30154526 | MS.gene073936:intron |
| TCTCAACTTAGAGCTCCTAA+GGG | 0.649001 | 1.4:-30149633 | MS.gene073936:CDS |
| ATGCAATCTCATAAGAAGGA+GGG | 0.653021 | 1.4:+30152828 | None:intergenic |
| CTATTGACAGGACCAAATGG+TGG | 0.654961 | 1.4:-30147508 | MS.gene073936:CDS |
| TAAGAAACTCTACGTAGGAG+AGG | 0.665205 | 1.4:-30145057 | MS.gene073936:intron |
| AGGAGCTCTAAGTTGAGACA+TGG | 0.668968 | 1.4:+30149638 | None:intergenic |
| ACATTTAATTGGTCCCACGT+GGG | 0.675111 | 1.4:-30151539 | MS.gene073936:CDS |
| TGGTTCAACATAGCAGAAGG+AGG | 0.676802 | 1.4:-30147568 | MS.gene073936:CDS |
| GGCGGCCTCCACCTTCGTAG+TGG | 0.679029 | 1.4:+30149455 | None:intergenic |
| TATTTCAGGAACGTCCAAGT+GGG | 0.679077 | 1.4:-30154102 | MS.gene073936:intron |
| TAAGCTACTTGAATGGAAGG+AGG | 0.685452 | 1.4:-30151650 | MS.gene073936:CDS |
| CAACAGGGCAACCAGCTCTG+GGG | 0.696033 | 1.4:+30156487 | None:intergenic |
| GGTAATCCACTGCAATGTGG+TGG | 0.696559 | 1.4:+30153645 | None:intergenic |
| ATGACAGACGGATAATCTCG+AGG | 0.699731 | 1.4:-30144192 | MS.gene073936:intron |
| GAAGAGCCTATAGTCACCGG+GGG | 0.702625 | 1.4:+30145107 | None:intergenic |
| ATATTTCATCAACAAGCACA+AGG | 0.705941 | 1.4:+30145699 | None:intergenic |
| GTATTTCAGGAACGTCCAAG+TGG | 0.706411 | 1.4:-30154103 | MS.gene073936:intron |
| TGACCAAAAGATCAGAAACA+GGG | 0.713078 | 1.4:+30154009 | None:intergenic |
| TGAAGAGCCTATAGTCACCG+GGG | 0.713684 | 1.4:+30145106 | None:intergenic |
| TAACCCAGTAGCCACCCACG+TGG | 0.719610 | 1.4:+30151525 | None:intergenic |
| CCCGGGAACAGGAAGCAGTG+TGG | 0.720310 | 1.4:-30149596 | MS.gene073936:CDS |
| CCAGATAAGAAACTCTACGT+AGG | 0.723183 | 1.4:-30145062 | MS.gene073936:CDS |
| GGAATGGTTTACCACTACGA+AGG | 0.726194 | 1.4:-30149466 | MS.gene073936:CDS |
| GAATTTCTCATTCGGCAAGG+GGG | 0.728126 | 1.4:-30154669 | MS.gene073936:CDS |
| TTTGGTAATCACGAGCAATG+TGG | 0.728156 | 1.4:+30149215 | None:intergenic |
| AAAATGCCAATACCACAACA+GGG | 0.735670 | 1.4:+30156472 | None:intergenic |
| CTTGTTGATGAAATATGCCG+AGG | 0.737644 | 1.4:-30145692 | MS.gene073936:CDS |
| AACCCAGTAGCCACCCACGT+GGG | 0.743986 | 1.4:+30151526 | None:intergenic |
| ATTGGTAATCCACTGCAATG+TGG | 0.767045 | 1.4:+30153642 | None:intergenic |
| GTCAAAATAGGGAATCACGG+CGG | 0.796421 | 1.4:+30147408 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 30143998 | 30158285 | 30143998 | ID=MS.gene073936 |
| chr1.4 | mRNA | 30143998 | 30158285 | 30143998 | ID=MS.gene073936.t1;Parent=MS.gene073936 |
| chr1.4 | exon | 30158204 | 30158285 | 30158204 | ID=MS.gene073936.t1.exon1;Parent=MS.gene073936.t1 |
| chr1.4 | CDS | 30158204 | 30158285 | 30158204 | ID=cds.MS.gene073936.t1;Parent=MS.gene073936.t1 |
| chr1.4 | exon | 30157979 | 30158076 | 30157979 | ID=MS.gene073936.t1.exon2;Parent=MS.gene073936.t1 |
| chr1.4 | CDS | 30157979 | 30158076 | 30157979 | ID=cds.MS.gene073936.t1;Parent=MS.gene073936.t1 |
| chr1.4 | exon | 30156823 | 30156898 | 30156823 | ID=MS.gene073936.t1.exon3;Parent=MS.gene073936.t1 |
| chr1.4 | CDS | 30156823 | 30156898 | 30156823 | ID=cds.MS.gene073936.t1;Parent=MS.gene073936.t1 |
| chr1.4 | exon | 30156485 | 30156604 | 30156485 | ID=MS.gene073936.t1.exon4;Parent=MS.gene073936.t1 |
| chr1.4 | CDS | 30156485 | 30156604 | 30156485 | ID=cds.MS.gene073936.t1;Parent=MS.gene073936.t1 |
| chr1.4 | exon | 30155909 | 30155956 | 30155909 | ID=MS.gene073936.t1.exon5;Parent=MS.gene073936.t1 |
| chr1.4 | CDS | 30155909 | 30155956 | 30155909 | ID=cds.MS.gene073936.t1;Parent=MS.gene073936.t1 |
| chr1.4 | exon | 30155640 | 30155704 | 30155640 | ID=MS.gene073936.t1.exon6;Parent=MS.gene073936.t1 |
| chr1.4 | CDS | 30155640 | 30155704 | 30155640 | ID=cds.MS.gene073936.t1;Parent=MS.gene073936.t1 |
| chr1.4 | exon | 30155382 | 30155467 | 30155382 | ID=MS.gene073936.t1.exon7;Parent=MS.gene073936.t1 |
| chr1.4 | CDS | 30155382 | 30155467 | 30155382 | ID=cds.MS.gene073936.t1;Parent=MS.gene073936.t1 |
| chr1.4 | exon | 30154527 | 30154691 | 30154527 | ID=MS.gene073936.t1.exon8;Parent=MS.gene073936.t1 |
| chr1.4 | CDS | 30154527 | 30154691 | 30154527 | ID=cds.MS.gene073936.t1;Parent=MS.gene073936.t1 |
| chr1.4 | exon | 30154007 | 30154116 | 30154007 | ID=MS.gene073936.t1.exon9;Parent=MS.gene073936.t1 |
| chr1.4 | CDS | 30154007 | 30154116 | 30154007 | ID=cds.MS.gene073936.t1;Parent=MS.gene073936.t1 |
| chr1.4 | exon | 30153788 | 30153893 | 30153788 | ID=MS.gene073936.t1.exon10;Parent=MS.gene073936.t1 |
| chr1.4 | CDS | 30153788 | 30153893 | 30153788 | ID=cds.MS.gene073936.t1;Parent=MS.gene073936.t1 |
| chr1.4 | exon | 30153639 | 30153714 | 30153639 | ID=MS.gene073936.t1.exon11;Parent=MS.gene073936.t1 |
| chr1.4 | CDS | 30153639 | 30153714 | 30153639 | ID=cds.MS.gene073936.t1;Parent=MS.gene073936.t1 |
| chr1.4 | exon | 30152816 | 30152874 | 30152816 | ID=MS.gene073936.t1.exon12;Parent=MS.gene073936.t1 |
| chr1.4 | CDS | 30152816 | 30152874 | 30152816 | ID=cds.MS.gene073936.t1;Parent=MS.gene073936.t1 |
| chr1.4 | exon | 30152598 | 30152665 | 30152598 | ID=MS.gene073936.t1.exon13;Parent=MS.gene073936.t1 |
| chr1.4 | CDS | 30152598 | 30152665 | 30152598 | ID=cds.MS.gene073936.t1;Parent=MS.gene073936.t1 |
| chr1.4 | exon | 30151504 | 30151677 | 30151504 | ID=MS.gene073936.t1.exon14;Parent=MS.gene073936.t1 |
| chr1.4 | CDS | 30151504 | 30151677 | 30151504 | ID=cds.MS.gene073936.t1;Parent=MS.gene073936.t1 |
| chr1.4 | exon | 30149806 | 30150012 | 30149806 | ID=MS.gene073936.t1.exon15;Parent=MS.gene073936.t1 |
| chr1.4 | CDS | 30149806 | 30150012 | 30149806 | ID=cds.MS.gene073936.t1;Parent=MS.gene073936.t1 |
| chr1.4 | exon | 30149447 | 30149703 | 30149447 | ID=MS.gene073936.t1.exon16;Parent=MS.gene073936.t1 |
| chr1.4 | CDS | 30149447 | 30149703 | 30149447 | ID=cds.MS.gene073936.t1;Parent=MS.gene073936.t1 |
| chr1.4 | exon | 30149195 | 30149338 | 30149195 | ID=MS.gene073936.t1.exon17;Parent=MS.gene073936.t1 |
| chr1.4 | CDS | 30149195 | 30149338 | 30149195 | ID=cds.MS.gene073936.t1;Parent=MS.gene073936.t1 |
| chr1.4 | exon | 30148462 | 30148519 | 30148462 | ID=MS.gene073936.t1.exon18;Parent=MS.gene073936.t1 |
| chr1.4 | CDS | 30148462 | 30148519 | 30148462 | ID=cds.MS.gene073936.t1;Parent=MS.gene073936.t1 |
| chr1.4 | exon | 30147348 | 30147647 | 30147348 | ID=MS.gene073936.t1.exon19;Parent=MS.gene073936.t1 |
| chr1.4 | CDS | 30147348 | 30147647 | 30147348 | ID=cds.MS.gene073936.t1;Parent=MS.gene073936.t1 |
| chr1.4 | exon | 30145058 | 30145771 | 30145058 | ID=MS.gene073936.t1.exon20;Parent=MS.gene073936.t1 |
| chr1.4 | CDS | 30145058 | 30145771 | 30145058 | ID=cds.MS.gene073936.t1;Parent=MS.gene073936.t1 |
| chr1.4 | exon | 30143998 | 30144207 | 30143998 | ID=MS.gene073936.t1.exon21;Parent=MS.gene073936.t1 |
| chr1.4 | CDS | 30143998 | 30144207 | 30143998 | ID=cds.MS.gene073936.t1;Parent=MS.gene073936.t1 |
| Gene Sequence |
| Protein sequence |
