Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07484.t1 | XP_013468845.1 | 92.9 | 169 | 12 | 0 | 1 | 169 | 1 | 169 | 3.80E-49 | 204.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07484.t1 | Q8R344 | 39.0 | 105 | 58 | 2 | 71 | 169 | 57 | 161 | 1.8e-10 | 67.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07484.t1 | A0A072VM63 | 92.9 | 169 | 12 | 0 | 1 | 169 | 1 | 169 | 2.8e-49 | 204.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene34840 | MS.gene07484 | PPI |
MS.gene63961 | MS.gene07484 | PPI |
MS.gene025434 | MS.gene07484 | PPI |
MS.gene07484 | MS.gene025041 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07484.t1 | MTR_1g077570 | 95.858 | 169 | 7 | 0 | 1 | 169 | 1 | 169 | 3.27e-114 | 321 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07484.t1 | AT3G05070 | 56.173 | 162 | 47 | 2 | 1 | 162 | 1 | 138 | 8.51e-52 | 162 |
Find 48 sgRNAs with CRISPR-Local
Find 140 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGAAACAGGATCTTCAAATT+TGG | 0.167763 | 1.2:+63213421 | None:intergenic |
CAGGTCCCAGTTGGGTTTCT+TGG | 0.181003 | 1.2:+63212470 | None:intergenic |
GATGATCAACAAGAAGAAAA+AGG | 0.261290 | 1.2:-63213628 | MS.gene07484:CDS |
AGAGTTGAACTAACCTCTTT+AGG | 0.296239 | 1.2:+63213377 | None:intergenic |
TTGTTGTTCGTCTTGATTAT+TGG | 0.307783 | 1.2:+63213684 | None:intergenic |
TTCGTCTTGATTATTGGGTT+CGG | 0.316958 | 1.2:+63213690 | None:intergenic |
ACAAGTTACAACCTAATCTT+TGG | 0.319987 | 1.2:+63211226 | None:intergenic |
TGTTGTTCGTCTTGATTATT+GGG | 0.328531 | 1.2:+63213685 | None:intergenic |
GAAACAGGATCTTCAAATTT+GGG | 0.329561 | 1.2:+63213422 | None:intergenic |
TTGATTATTGGGTTCGGGTT+CGG | 0.333205 | 1.2:+63213696 | None:intergenic |
TCGTCTTGATTATTGGGTTC+GGG | 0.354725 | 1.2:+63213691 | None:intergenic |
AGGTCCCAGTTGGGTTTCTT+GGG | 0.368404 | 1.2:+63212471 | None:intergenic |
TTGCTCAATTGATTCGTCTT+CGG | 0.383425 | 1.2:+63213783 | None:intergenic |
TCCTCATGATAAGCATCTTC+AGG | 0.387809 | 1.2:-63213471 | MS.gene07484:CDS |
GGGTTCGGGTTCGGAGGAAT+TGG | 0.388909 | 1.2:+63213705 | None:intergenic |
GAAGAAGTGGGTGGTGGTTG+TGG | 0.407660 | 1.2:+63213661 | None:intergenic |
TCAGGCTCAGGAACAGAAAC+AGG | 0.420107 | 1.2:+63213407 | None:intergenic |
TTGTTGTAGTGAAGAGGGAG+AGG | 0.423111 | 1.2:-63213525 | MS.gene07484:intron |
TTGTTGATCATCATCGTCTT+CGG | 0.439513 | 1.2:+63213639 | None:intergenic |
ATCTCTTCGCAGGTCCCAGT+TGG | 0.451641 | 1.2:+63212461 | None:intergenic |
TTGCTCCCAAGAAACCCAAC+TGG | 0.478538 | 1.2:-63212476 | MS.gene07484:CDS |
TCAAATTTGGGAAGAACAGC+AGG | 0.488113 | 1.2:+63213434 | None:intergenic |
GAAGGCTCTCTATCAACTCA+TGG | 0.498657 | 1.2:-63212400 | MS.gene07484:CDS |
TACAAACGGCGCCAAAGATT+AGG | 0.500555 | 1.2:-63211237 | None:intergenic |
TCTCTTCGCAGGTCCCAGTT+GGG | 0.501022 | 1.2:+63212462 | None:intergenic |
TCTTCTGCACATCTCTTCGC+AGG | 0.509218 | 1.2:+63212451 | None:intergenic |
TTGGGAGCAATATTGAGAAA+CGG | 0.510040 | 1.2:+63212489 | None:intergenic |
AGCTAGGAGTCTTTCACGGC+GGG | 0.515574 | 1.2:+63213750 | None:intergenic |
TCTTTCACGGCGGGAAGCGA+CGG | 0.522634 | 1.2:+63213759 | None:intergenic |
GTTGAGCGGCGCGAAGAGCT+AGG | 0.534647 | 1.2:+63213734 | None:intergenic |
GCTTGAGAAGCGAACTCAGA+AGG | 0.553904 | 1.2:-63212418 | MS.gene07484:CDS |
ATCATCGTCTTCGGAAGAAG+TGG | 0.558826 | 1.2:+63213648 | None:intergenic |
CATGATAAGCATCTTCAGGA+AGG | 0.566793 | 1.2:-63213467 | MS.gene07484:CDS |
ATTATTGGGTTCGGGTTCGG+AGG | 0.580289 | 1.2:+63213699 | None:intergenic |
GAAGAGCTAGGAGTCTTTCA+CGG | 0.584484 | 1.2:+63213746 | None:intergenic |
TGTTTCTGTTCCTGAGCCTG+AGG | 0.588746 | 1.2:-63213405 | MS.gene07484:CDS |
TCTTCGGAAGAAGTGGGTGG+TGG | 0.588852 | 1.2:+63213655 | None:intergenic |
AAGGCTCTCTATCAACTCAT+GGG | 0.591229 | 1.2:-63212399 | MS.gene07484:intron |
GAAGCAAAATCAGTTAGCTG+AGG | 0.593540 | 1.2:-63211267 | MS.gene07484:CDS |
GCTGAGGGAGATGATACAAA+CGG | 0.608436 | 1.2:-63211251 | MS.gene07484:CDS |
TGCTCCCAAGAAACCCAACT+GGG | 0.615079 | 1.2:-63212475 | MS.gene07484:CDS |
ATGATAAGCATCTTCAGGAA+GGG | 0.624291 | 1.2:-63213466 | MS.gene07484:CDS |
TCCTGAAGATGCTTATCATG+AGG | 0.624871 | 1.2:+63213470 | None:intergenic |
GGAATTGGATAATTGTTGAG+CGG | 0.629730 | 1.2:+63213720 | None:intergenic |
AAGCAAAATCAGTTAGCTGA+GGG | 0.635647 | 1.2:-63211266 | MS.gene07484:CDS |
TCATCGTCTTCGGAAGAAGT+GGG | 0.638207 | 1.2:+63213649 | None:intergenic |
GAGCTAGGAGTCTTTCACGG+CGG | 0.702871 | 1.2:+63213749 | None:intergenic |
TCGTCTTCGGAAGAAGTGGG+TGG | 0.708061 | 1.2:+63213652 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CTATAATAAAAGATAAAATA+TGG | + | chr1.2:63212230-63212249 | None:intergenic | 10.0% |
!! | CTAATAGTACTAAAAAATTA+CGG | + | chr1.2:63213605-63213624 | None:intergenic | 15.0% |
!! | GTCATATTTATAATTTATGA+TGG | - | chr1.2:63213153-63213172 | MS.gene07484:intron | 15.0% |
!!! | GATTCTAAAATAGAAATAAT+TGG | - | chr1.2:63213390-63213409 | MS.gene07484:intron | 15.0% |
!!! | TTTCTTATTTTCTTACTATT+TGG | - | chr1.2:63212700-63212719 | MS.gene07484:intron | 15.0% |
!!! | TTTTTTGAATTGAATTGAAT+TGG | - | chr1.2:63211470-63211489 | MS.gene07484:intron | 15.0% |
!!! | TTTTTTTAATTTTTCAACAG+TGG | - | chr1.2:63213731-63213750 | MS.gene07484:CDS | 15.0% |
!! | AAATACTCATAAAATTGCTT+GGG | + | chr1.2:63212432-63212451 | None:intergenic | 20.0% |
!! | AGAAACATTATTGTAAATGT+AGG | + | chr1.2:63212685-63212704 | None:intergenic | 20.0% |
!! | ATAAGCTATAAGATCAAAAA+AGG | - | chr1.2:63212162-63212181 | MS.gene07484:intron | 20.0% |
!! | CCTAATAAAAAGTAGTTAAA+AGG | + | chr1.2:63212517-63212536 | None:intergenic | 20.0% |
!! | TAAATACTCATAAAATTGCT+TGG | + | chr1.2:63212433-63212452 | None:intergenic | 20.0% |
!! | TAATTGCTTATGTATATTTC+TGG | - | chr1.2:63211721-63211740 | MS.gene07484:intron | 20.0% |
!! | TGACTAATGAATTAGTATTA+GGG | - | chr1.2:63213332-63213351 | MS.gene07484:intron | 20.0% |
!! | TTTGCTTAACTAATAATATC+TGG | - | chr1.2:63213276-63213295 | MS.gene07484:intron | 20.0% |
!!! | ATTGTTTTTGTATAAGCTAT+AGG | + | chr1.2:63212203-63212222 | None:intergenic | 20.0% |
!!! | CCTTTTAACTACTTTTTATT+AGG | - | chr1.2:63212514-63212533 | MS.gene07484:intron | 20.0% |
!!! | CGTAATTTTTTAGTACTATT+AGG | - | chr1.2:63213603-63213622 | MS.gene07484:intron | 20.0% |
!!! | GGTGTTTTTATAAGTTATTA+TGG | - | chr1.2:63212343-63212362 | MS.gene07484:intron | 20.0% |
!!! | TTGTTTTTGTATAAGCTATA+GGG | + | chr1.2:63212202-63212221 | None:intergenic | 20.0% |
!!! | TTTTTCAATTAAGAATCCAT+GGG | - | chr1.2:63212003-63212022 | MS.gene07484:intron | 20.0% |
!!! | TTTTTTCAATTAAGAATCCA+TGG | - | chr1.2:63212002-63212021 | MS.gene07484:intron | 20.0% |
! | AAAAGTAGTTAAAAGGTAAG+AGG | + | chr1.2:63212510-63212529 | None:intergenic | 25.0% |
! | AAACAGAGTTAGAACAAAAT+TGG | - | chr1.2:63213182-63213201 | MS.gene07484:intron | 25.0% |
! | ATATTCAAGAGAAAGAAAGT+AGG | - | chr1.2:63212789-63212808 | MS.gene07484:intron | 25.0% |
! | ATGATCAACAAGAAGAAAAA+GGG | - | chr1.2:63211401-63211420 | MS.gene07484:intron | 25.0% |
! | ATTAAGCTGTTTATACAAAC+AGG | - | chr1.2:63212289-63212308 | MS.gene07484:intron | 25.0% |
! | CTGACTAATGAATTAGTATT+AGG | - | chr1.2:63213331-63213350 | MS.gene07484:intron | 25.0% |
! | GAAATTGGCAATAATACTTA+GGG | + | chr1.2:63213512-63213531 | None:intergenic | 25.0% |
! | TAACTTATAAAAACACCTTC+CGG | + | chr1.2:63212340-63212359 | None:intergenic | 25.0% |
! | TACTTAAGTTAATCGAAACA+AGG | + | chr1.2:63211685-63211704 | None:intergenic | 25.0% |
! | TAGCTTATGGAAATAGATTA+TGG | - | chr1.2:63211815-63211834 | MS.gene07484:intron | 25.0% |
! | TATGGATAGTCTATAGAAAT+AGG | - | chr1.2:63212361-63212380 | MS.gene07484:intron | 25.0% |
! | TATTCAAGAGAAAGAAAGTA+GGG | - | chr1.2:63212790-63212809 | MS.gene07484:intron | 25.0% |
! | TGAAATTGGCAATAATACTT+AGG | + | chr1.2:63213513-63213532 | None:intergenic | 25.0% |
! | TGTAATCATAGAATCAGAAA+TGG | + | chr1.2:63212967-63212986 | None:intergenic | 25.0% |
!! | CTTATCATTAATTTTACCCA+TGG | + | chr1.2:63212022-63212041 | None:intergenic | 25.0% |
!! | TTTGACACATTTTCAATGAA+TGG | - | chr1.2:63212732-63212751 | MS.gene07484:intron | 25.0% |
!! | TTTTTGCAATCAGTATTTCA+TGG | + | chr1.2:63212996-63213015 | None:intergenic | 25.0% |
!!! | AAATAGATTATGGCTTTGTT+TGG | - | chr1.2:63211825-63211844 | MS.gene07484:intron | 25.0% |
!!! | TCAAATTGTTTTATACAAGC+CGG | - | chr1.2:63212318-63212337 | MS.gene07484:intron | 25.0% |
AGAAACAGGATCTTCAAATT+TGG | + | chr1.2:63211610-63211629 | None:intergenic | 30.0% | |
AGAACTTAAGCTGTTATGAA+CGG | - | chr1.2:63212879-63212898 | MS.gene07484:intron | 30.0% | |
AGTACATACTCAGAAATCTA+TGG | + | chr1.2:63213095-63213114 | None:intergenic | 30.0% | |
CAAGACAAAATTTCTTCTGT+AGG | - | chr1.2:63213472-63213491 | MS.gene07484:CDS | 30.0% | |
GAAACAGGATCTTCAAATTT+GGG | + | chr1.2:63211609-63211628 | None:intergenic | 30.0% | |
GATGATCAACAAGAAGAAAA+AGG | - | chr1.2:63211400-63211419 | MS.gene07484:intron | 30.0% | |
GCTAGTTGATTGAATTTGTA+GGG | - | chr1.2:63211905-63211924 | MS.gene07484:intron | 30.0% | |
GTACATACTCAGAAATCTAT+GGG | + | chr1.2:63213094-63213113 | None:intergenic | 30.0% | |
TATACAAGCAGTTAATGACA+TGG | + | chr1.2:63212403-63212422 | None:intergenic | 30.0% | |
TGTTGTTCGTCTTGATTATT+GGG | + | chr1.2:63211346-63211365 | None:intergenic | 30.0% | |
TTGATTGAATTTGTAGGGTT+TGG | - | chr1.2:63211910-63211929 | MS.gene07484:intron | 30.0% | |
TTTGACTAAAAAGACCAGTT+TGG | + | chr1.2:63212128-63212147 | None:intergenic | 30.0% | |
TTTGTTCTAACTCTGTTTCA+TGG | + | chr1.2:63213180-63213199 | None:intergenic | 30.0% | |
! | ATTTTCAATGAATGGTGAGT+TGG | - | chr1.2:63212740-63212759 | MS.gene07484:intron | 30.0% |
! | GAACTTGTGAGATTTGAAAT+TGG | + | chr1.2:63213527-63213546 | None:intergenic | 30.0% |
! | GTAGGGTTTGGTAAAATTAA+CGG | - | chr1.2:63211922-63211941 | MS.gene07484:intron | 30.0% |
! | TTGAGTGATTTGAAATCTGT+CGG | - | chr1.2:63213037-63213056 | MS.gene07484:intron | 30.0% |
! | TTGATTTTGTTCCATGAATG+TGG | - | chr1.2:63213686-63213705 | MS.gene07484:CDS | 30.0% |
! | TTGTTGTTCGTCTTGATTAT+TGG | + | chr1.2:63211347-63211366 | None:intergenic | 30.0% |
! | TTTTCAATGAATGGTGAGTT+GGG | - | chr1.2:63212741-63212760 | MS.gene07484:intron | 30.0% |
!!! | TTTTGTTGTTGTAGTGAAGA+GGG | - | chr1.2:63211498-63211517 | MS.gene07484:intron | 30.0% |
!!! | TTTTTGTTGTTGTAGTGAAG+AGG | - | chr1.2:63211497-63211516 | MS.gene07484:intron | 30.0% |
AAAACTGTTGGATGAGGATT+AGG | - | chr1.2:63212905-63212924 | MS.gene07484:intron | 35.0% | |
AAGCAAAATCAGTTAGCTGA+GGG | - | chr1.2:63213762-63213781 | MS.gene07484:CDS | 35.0% | |
AATCCTTAACAAGTGCTCTA+AGG | + | chr1.2:63213374-63213393 | None:intergenic | 35.0% | |
AGAGTTGAACTAACCTCTTT+AGG | + | chr1.2:63211654-63211673 | None:intergenic | 35.0% | |
ATGATAAGCATCTTCAGGAA+GGG | - | chr1.2:63211562-63211581 | MS.gene07484:intron | 35.0% | |
ATTCAGAGTAAGGTCATGTT+TGG | + | chr1.2:63212485-63212504 | None:intergenic | 35.0% | |
CTAGATAGAATAACTTCACC+TGG | - | chr1.2:63212842-63212861 | MS.gene07484:intron | 35.0% | |
CTATGAAAAACTATAGCCAG+CGG | + | chr1.2:63213558-63213577 | None:intergenic | 35.0% | |
GGAATTGGATAATTGTTGAG+CGG | + | chr1.2:63211311-63211330 | None:intergenic | 35.0% | |
TATAAGCTATAGGGTCTGTT+TGG | + | chr1.2:63212193-63212212 | None:intergenic | 35.0% | |
TATGAACGGATCAAAACTGT+TGG | - | chr1.2:63212893-63212912 | MS.gene07484:intron | 35.0% | |
TTCGTCTTGATTATTGGGTT+CGG | + | chr1.2:63211341-63211360 | None:intergenic | 35.0% | |
TTGGGAGCAATATTGAGAAA+CGG | + | chr1.2:63212542-63212561 | None:intergenic | 35.0% | |
TTGTTGATCATCATCGTCTT+CGG | + | chr1.2:63211392-63211411 | None:intergenic | 35.0% | |
! | GGACTTTGGAGACATTATAA+TGG | - | chr1.2:63213707-63213726 | MS.gene07484:CDS | 35.0% |
! | GGCTAGTTGATTGAATTTGT+AGG | - | chr1.2:63211904-63211923 | MS.gene07484:intron | 35.0% |
! | TATCCTTAGAGCACTTGTTA+AGG | - | chr1.2:63213368-63213387 | MS.gene07484:intron | 35.0% |
!! | ACAAGTTCTTTTATTTCCGC+TGG | - | chr1.2:63213539-63213558 | MS.gene07484:intron | 35.0% |
!! | ATTGTTTTATACAAGCCGGA+AGG | - | chr1.2:63212322-63212341 | MS.gene07484:intron | 35.0% |
!! | TTGCTCAATTGATTCGTCTT+CGG | + | chr1.2:63211248-63211267 | None:intergenic | 35.0% |
!!! | GCAAAAACACTGATTTTCTC+TGG | - | chr1.2:63213009-63213028 | MS.gene07484:intron | 35.0% |
AAGCTCTCGAAGATAGCTTA+TGG | - | chr1.2:63211802-63211821 | MS.gene07484:intron | 40.0% | |
AAGGCTCTCTATCAACTCAT+GGG | - | chr1.2:63212629-63212648 | MS.gene07484:intron | 40.0% | |
ATAAGCAGCTGTGACTGTTT+GGG | - | chr1.2:63211745-63211764 | MS.gene07484:intron | 40.0% | |
ATCAGCTCATGAGAAAGTGA+TGG | - | chr1.2:63212099-63212118 | MS.gene07484:intron | 40.0% | |
ATGACAGTGACAATGACTTG+AGG | + | chr1.2:63213121-63213140 | None:intergenic | 40.0% | |
CATGATAAGCATCTTCAGGA+AGG | - | chr1.2:63211561-63211580 | MS.gene07484:intron | 40.0% | |
CTCATAAAATTGCTTGGGAG+AGG | + | chr1.2:63212427-63212446 | None:intergenic | 40.0% | |
GAAAGTGATGGTTACCAAAC+TGG | - | chr1.2:63212111-63212130 | MS.gene07484:intron | 40.0% | |
GAAGCAAAATCAGTTAGCTG+AGG | - | chr1.2:63213761-63213780 | MS.gene07484:CDS | 40.0% | |
GTAAGAGGCAATTCAGAGTA+AGG | + | chr1.2:63212495-63212514 | None:intergenic | 40.0% | |
TCAAATTTGGGAAGAACAGC+AGG | + | chr1.2:63211597-63211616 | None:intergenic | 40.0% | |
TCAAGAGAAAGAAAGTAGGG+AGG | - | chr1.2:63212793-63212812 | MS.gene07484:intron | 40.0% | |
TCCTCATGATAAGCATCTTC+AGG | - | chr1.2:63211557-63211576 | MS.gene07484:intron | 40.0% | |
TCCTGAAGATGCTTATCATG+AGG | + | chr1.2:63211561-63211580 | None:intergenic | 40.0% | |
TCGTCTTGATTATTGGGTTC+GGG | + | chr1.2:63211340-63211359 | None:intergenic | 40.0% | |
TGAAAGAACCTGCAAAGACA+TGG | + | chr1.2:63213581-63213600 | None:intergenic | 40.0% | |
TGACAGTGACAATGACTTGA+GGG | + | chr1.2:63213120-63213139 | None:intergenic | 40.0% | |
TGTTCCATGAATGTGGACTT+TGG | - | chr1.2:63213693-63213712 | MS.gene07484:CDS | 40.0% | |
TTCTAAACTACAGCGAATCC+AGG | + | chr1.2:63212863-63212882 | None:intergenic | 40.0% | |
TTTCATAGCCATGTCTTTGC+AGG | - | chr1.2:63213570-63213589 | MS.gene07484:intron | 40.0% | |
! | ATGAATGGTGAGTTGGGAAA+TGG | - | chr1.2:63212747-63212766 | MS.gene07484:intron | 40.0% |
! | GTTGATAAGCTAGCTTACAG+TGG | - | chr1.2:63211871-63211890 | MS.gene07484:intron | 40.0% |
! | TGAATGGTGAGTTGGGAAAT+GGG | - | chr1.2:63212748-63212767 | MS.gene07484:intron | 40.0% |
! | TTGATTATTGGGTTCGGGTT+CGG | + | chr1.2:63211335-63211354 | None:intergenic | 40.0% |
!! | ACCTCTTTAGGTTTTTCCTC+AGG | + | chr1.2:63211642-63211661 | None:intergenic | 40.0% |
ATCATCGTCTTCGGAAGAAG+TGG | + | chr1.2:63211383-63211402 | None:intergenic | 45.0% | |
CATAAGCAGCTGTGACTGTT+TGG | - | chr1.2:63211744-63211763 | MS.gene07484:intron | 45.0% | |
CGGATCAAAACTGTTGGATG+AGG | - | chr1.2:63212899-63212918 | MS.gene07484:intron | 45.0% | |
GAAGAGCTAGGAGTCTTTCA+CGG | + | chr1.2:63211285-63211304 | None:intergenic | 45.0% | |
GAAGGCTCTCTATCAACTCA+TGG | - | chr1.2:63212628-63212647 | MS.gene07484:intron | 45.0% | |
GCCTGAGGAAAAACCTAAAG+AGG | - | chr1.2:63211638-63211657 | MS.gene07484:intron | 45.0% | |
GCTGAGGGAGATGATACAAA+CGG | - | chr1.2:63213777-63213796 | MS.gene07484:CDS | 45.0% | |
GCTTACAGTGGATAGCGAAT+TGG | - | chr1.2:63211883-63211902 | MS.gene07484:intron | 45.0% | |
GTCTCCAAAGTCCACATTCA+TGG | + | chr1.2:63213700-63213719 | None:intergenic | 45.0% | |
TCATCGTCTTCGGAAGAAGT+GGG | + | chr1.2:63211382-63211401 | None:intergenic | 45.0% | |
TTGTTGTAGTGAAGAGGGAG+AGG | - | chr1.2:63211503-63211522 | MS.gene07484:intron | 45.0% | |
! | TTAGGTTTTTCCTCAGGCTC+AGG | + | chr1.2:63211636-63211655 | None:intergenic | 45.0% |
AGGTCCCAGTTGGGTTTCTT+GGG | + | chr1.2:63212560-63212579 | None:intergenic | 50.0% | |
GCTTGAGAAGCGAACTCAGA+AGG | - | chr1.2:63212610-63212629 | MS.gene07484:intron | 50.0% | |
TCAGGCTCAGGAACAGAAAC+AGG | + | chr1.2:63211624-63211643 | None:intergenic | 50.0% | |
TCTTCTGCACATCTCTTCGC+AGG | + | chr1.2:63212580-63212599 | None:intergenic | 50.0% | |
TGCTCCCAAGAAACCCAACT+GGG | - | chr1.2:63212553-63212572 | MS.gene07484:intron | 50.0% | |
TTGCTCCCAAGAAACCCAAC+TGG | - | chr1.2:63212552-63212571 | MS.gene07484:intron | 50.0% | |
! | ATTATTGGGTTCGGGTTCGG+AGG | + | chr1.2:63211332-63211351 | None:intergenic | 50.0% |
! | TGTTTCTGTTCCTGAGCCTG+AGG | - | chr1.2:63211623-63211642 | MS.gene07484:intron | 50.0% |
AGCTAGGAGTCTTTCACGGC+GGG | + | chr1.2:63211281-63211300 | None:intergenic | 55.0% | |
ATCTCTTCGCAGGTCCCAGT+TGG | + | chr1.2:63212570-63212589 | None:intergenic | 55.0% | |
CAGGTCCCAGTTGGGTTTCT+TGG | + | chr1.2:63212561-63212580 | None:intergenic | 55.0% | |
GAGCTAGGAGTCTTTCACGG+CGG | + | chr1.2:63211282-63211301 | None:intergenic | 55.0% | |
TCGTCTTCGGAAGAAGTGGG+TGG | + | chr1.2:63211379-63211398 | None:intergenic | 55.0% | |
TCTCTTCGCAGGTCCCAGTT+GGG | + | chr1.2:63212569-63212588 | None:intergenic | 55.0% | |
TCTTCGGAAGAAGTGGGTGG+TGG | + | chr1.2:63211376-63211395 | None:intergenic | 55.0% | |
! | GAAGAAGTGGGTGGTGGTTG+TGG | + | chr1.2:63211370-63211389 | None:intergenic | 55.0% |
TCTTTCACGGCGGGAAGCGA+CGG | + | chr1.2:63211272-63211291 | None:intergenic | 60.0% | |
! | GGGTTCGGGTTCGGAGGAAT+TGG | + | chr1.2:63211326-63211345 | None:intergenic | 60.0% |
GTTGAGCGGCGCGAAGAGCT+AGG | + | chr1.2:63211297-63211316 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 63211238 | 63213812 | 63211238 | ID=MS.gene07484 |
chr1.2 | mRNA | 63211238 | 63213812 | 63211238 | ID=MS.gene07484.t1;Parent=MS.gene07484 |
chr1.2 | exon | 63213628 | 63213812 | 63213628 | ID=MS.gene07484.t1.exon1;Parent=MS.gene07484.t1 |
chr1.2 | CDS | 63213628 | 63213812 | 63213628 | ID=cds.MS.gene07484.t1;Parent=MS.gene07484.t1 |
chr1.2 | exon | 63213391 | 63213538 | 63213391 | ID=MS.gene07484.t1.exon2;Parent=MS.gene07484.t1 |
chr1.2 | CDS | 63213391 | 63213538 | 63213391 | ID=cds.MS.gene07484.t1;Parent=MS.gene07484.t1 |
chr1.2 | exon | 63212400 | 63212514 | 63212400 | ID=MS.gene07484.t1.exon3;Parent=MS.gene07484.t1 |
chr1.2 | CDS | 63212400 | 63212514 | 63212400 | ID=cds.MS.gene07484.t1;Parent=MS.gene07484.t1 |
chr1.2 | exon | 63211238 | 63211299 | 63211238 | ID=MS.gene07484.t1.exon4;Parent=MS.gene07484.t1 |
chr1.2 | CDS | 63211238 | 63211299 | 63211238 | ID=cds.MS.gene07484.t1;Parent=MS.gene07484.t1 |
Gene Sequence |
Protein sequence |