Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63961.t1 | XP_024630626.1 | 98.7 | 238 | 3 | 0 | 1 | 238 | 1 | 238 | 2.00E-129 | 472.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63961.t1 | Q3SX41 | 42.0 | 231 | 123 | 5 | 7 | 232 | 7 | 231 | 6.4e-44 | 179.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63961.t1 | A0A072TKA2 | 98.7 | 238 | 3 | 0 | 1 | 238 | 1 | 238 | 1.4e-129 | 472.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene63961 | 0.863004 | 3.39E-64 | -1.69E-46 |
| MS.gene049159 | MS.gene63961 | 0.800335 | 1.51E-48 | -1.69E-46 |
| MS.gene049254 | MS.gene63961 | 0.809035 | 2.31E-50 | -1.69E-46 |
| MS.gene049264 | MS.gene63961 | 0.833204 | 6.10E-56 | -1.69E-46 |
| MS.gene049350 | MS.gene63961 | 0.800258 | 1.57E-48 | -1.69E-46 |
| MS.gene049368 | MS.gene63961 | 0.819649 | 1.04E-52 | -1.69E-46 |
| MS.gene049786 | MS.gene63961 | 0.807322 | 5.35E-50 | -1.69E-46 |
| MS.gene049850 | MS.gene63961 | 0.816461 | 5.47E-52 | -1.69E-46 |
| MS.gene049983 | MS.gene63961 | 0.818147 | 2.28E-52 | -1.69E-46 |
| MS.gene050551 | MS.gene63961 | 0.809209 | 2.12E-50 | -1.69E-46 |
| MS.gene050556 | MS.gene63961 | 0.82906 | 6.36E-55 | -1.69E-46 |
| MS.gene050654 | MS.gene63961 | 0.836099 | 1.14E-56 | -1.69E-46 |
| MS.gene050762 | MS.gene63961 | 0.809013 | 2.33E-50 | -1.69E-46 |
| MS.gene050763 | MS.gene63961 | 0.805983 | 1.03E-49 | -1.69E-46 |
| MS.gene051102 | MS.gene63961 | 0.826488 | 2.64E-54 | -1.69E-46 |
| MS.gene051198 | MS.gene63961 | 0.81848 | 1.92E-52 | -1.69E-46 |
| MS.gene051210 | MS.gene63961 | 0.825748 | 3.96E-54 | -1.69E-46 |
| MS.gene051490 | MS.gene63961 | 0.808428 | 3.11E-50 | -1.69E-46 |
| MS.gene051800 | MS.gene63961 | 0.814181 | 1.76E-51 | -1.69E-46 |
| MS.gene052307 | MS.gene63961 | 0.826524 | 2.59E-54 | -1.69E-46 |
| MS.gene052434 | MS.gene63961 | 0.80304 | 4.21E-49 | -1.69E-46 |
| MS.gene052463 | MS.gene63961 | 0.839515 | 1.51E-57 | -1.69E-46 |
| MS.gene052609 | MS.gene63961 | 0.843093 | 1.73E-58 | -1.69E-46 |
| MS.gene052776 | MS.gene63961 | 0.822448 | 2.36E-53 | -1.69E-46 |
| MS.gene052994 | MS.gene63961 | 0.81233 | 4.48E-51 | -1.69E-46 |
| MS.gene053079 | MS.gene63961 | 0.834085 | 3.67E-56 | -1.69E-46 |
| MS.gene053226 | MS.gene63961 | 0.804391 | 2.21E-49 | -1.69E-46 |
| MS.gene05350 | MS.gene63961 | 0.805182 | 1.51E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene63961 | 0.808371 | 3.20E-50 | -1.69E-46 |
| MS.gene054467 | MS.gene63961 | 0.804625 | 1.97E-49 | -1.69E-46 |
| MS.gene054479 | MS.gene63961 | 0.808495 | 3.01E-50 | -1.69E-46 |
| MS.gene054576 | MS.gene63961 | 0.812731 | 3.66E-51 | -1.69E-46 |
| MS.gene05458 | MS.gene63961 | 0.815315 | 9.84E-52 | -1.69E-46 |
| MS.gene054824 | MS.gene63961 | 0.808905 | 2.46E-50 | -1.69E-46 |
| MS.gene054943 | MS.gene63961 | 0.819653 | 1.04E-52 | -1.69E-46 |
| MS.gene055311 | MS.gene63961 | 0.835635 | 1.50E-56 | -1.69E-46 |
| MS.gene055313 | MS.gene63961 | 0.862713 | 4.17E-64 | -1.69E-46 |
| MS.gene055314 | MS.gene63961 | 0.818825 | 1.60E-52 | -1.69E-46 |
| MS.gene055469 | MS.gene63961 | 0.810838 | 9.45E-51 | -1.69E-46 |
| MS.gene055513 | MS.gene63961 | 0.853334 | 2.56E-61 | -1.69E-46 |
| MS.gene055864 | MS.gene63961 | 0.823842 | 1.11E-53 | -1.69E-46 |
| MS.gene055926 | MS.gene63961 | 0.820656 | 6.11E-53 | -1.69E-46 |
| MS.gene056045 | MS.gene63961 | 0.832206 | 1.08E-55 | -1.69E-46 |
| MS.gene056181 | MS.gene63961 | 0.831989 | 1.22E-55 | -1.69E-46 |
| MS.gene056308 | MS.gene63961 | 0.83461 | 2.71E-56 | -1.69E-46 |
| MS.gene056390 | MS.gene63961 | 0.814841 | 1.25E-51 | -1.69E-46 |
| MS.gene056507 | MS.gene63961 | 0.820118 | 8.12E-53 | -1.69E-46 |
| MS.gene056509 | MS.gene63961 | 0.805906 | 1.06E-49 | -1.69E-46 |
| MS.gene056699 | MS.gene63961 | 0.818317 | 2.09E-52 | -1.69E-46 |
| MS.gene056831 | MS.gene63961 | 0.823082 | 1.68E-53 | -1.69E-46 |
| MS.gene057034 | MS.gene63961 | 0.837859 | 4.05E-57 | -1.69E-46 |
| MS.gene057360 | MS.gene63961 | 0.831033 | 2.10E-55 | -1.69E-46 |
| MS.gene057869 | MS.gene63961 | 0.80712 | 5.90E-50 | -1.69E-46 |
| MS.gene057915 | MS.gene63961 | 0.835152 | 1.98E-56 | -1.69E-46 |
| MS.gene057919 | MS.gene63961 | 0.811593 | 6.48E-51 | -1.69E-46 |
| MS.gene058010 | MS.gene63961 | 0.81015 | 1.33E-50 | -1.69E-46 |
| MS.gene058081 | MS.gene63961 | 0.824415 | 8.17E-54 | -1.69E-46 |
| MS.gene058289 | MS.gene63961 | 0.829322 | 5.49E-55 | -1.69E-46 |
| MS.gene058292 | MS.gene63961 | 0.813031 | 3.14E-51 | -1.69E-46 |
| MS.gene058330 | MS.gene63961 | 0.805215 | 1.49E-49 | -1.69E-46 |
| MS.gene05847 | MS.gene63961 | 0.80139 | 9.21E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene63961 | 0.801352 | 9.38E-49 | -1.69E-46 |
| MS.gene058638 | MS.gene63961 | 0.843563 | 1.30E-58 | -1.69E-46 |
| MS.gene058639 | MS.gene63961 | 0.858081 | 1.05E-62 | -1.69E-46 |
| MS.gene058647 | MS.gene63961 | 0.827534 | 1.48E-54 | -1.69E-46 |
| MS.gene058758 | MS.gene63961 | 0.809608 | 1.74E-50 | -1.69E-46 |
| MS.gene059170 | MS.gene63961 | 0.81986 | 9.30E-53 | -1.69E-46 |
| MS.gene059283 | MS.gene63961 | 0.806401 | 8.37E-50 | -1.69E-46 |
| MS.gene059439 | MS.gene63961 | 0.842358 | 2.72E-58 | -1.69E-46 |
| MS.gene059570 | MS.gene63961 | 0.815593 | 8.54E-52 | -1.69E-46 |
| MS.gene059725 | MS.gene63961 | 0.830535 | 2.78E-55 | -1.69E-46 |
| MS.gene059965 | MS.gene63961 | 0.831313 | 1.79E-55 | -1.69E-46 |
| MS.gene060296 | MS.gene63961 | 0.832516 | 9.04E-56 | -1.69E-46 |
| MS.gene060380 | MS.gene63961 | 0.822423 | 2.39E-53 | -1.69E-46 |
| MS.gene060400 | MS.gene63961 | 0.809279 | 2.05E-50 | -1.69E-46 |
| MS.gene060435 | MS.gene63961 | 0.806338 | 8.63E-50 | -1.69E-46 |
| MS.gene06052 | MS.gene63961 | 0.844 | 9.91E-59 | -1.69E-46 |
| MS.gene060637 | MS.gene63961 | 0.858816 | 6.35E-63 | -1.69E-46 |
| MS.gene060777 | MS.gene63961 | 0.821255 | 4.45E-53 | -1.69E-46 |
| MS.gene060802 | MS.gene63961 | 0.802293 | 6.01E-49 | -1.69E-46 |
| MS.gene060803 | MS.gene63961 | 0.820804 | 5.65E-53 | -1.69E-46 |
| MS.gene060932 | MS.gene63961 | 0.813066 | 3.09E-51 | -1.69E-46 |
| MS.gene060933 | MS.gene63961 | 0.81334 | 2.69E-51 | -1.69E-46 |
| MS.gene060937 | MS.gene63961 | 0.805272 | 1.45E-49 | -1.69E-46 |
| MS.gene061006 | MS.gene63961 | 0.816614 | 5.05E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene63961 | MS.gene062186 | PPI |
| MS.gene63961 | MS.gene07484 | PPI |
| MS.gene63961 | MS.gene004956 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63961.t1 | MTR_0004s0480 | 98.256 | 344 | 6 | 0 | 1 | 344 | 1 | 344 | 0.0 | 691 |
| MS.gene63961.t1 | MTR_7g080320 | 30.899 | 178 | 107 | 5 | 1 | 172 | 1 | 168 | 3.08e-15 | 76.6 |
| MS.gene63961.t1 | MTR_7g080320 | 29.078 | 141 | 93 | 3 | 135 | 269 | 209 | 348 | 1.18e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63961.t1 | AT5G51410 | 79.259 | 270 | 55 | 1 | 1 | 269 | 1 | 270 | 9.15e-155 | 437 |
| MS.gene63961.t1 | AT5G51410 | 79.259 | 270 | 55 | 1 | 1 | 269 | 1 | 270 | 9.15e-155 | 437 |
| MS.gene63961.t1 | AT5G51410 | 79.259 | 270 | 55 | 1 | 1 | 269 | 1 | 270 | 9.15e-155 | 437 |
| MS.gene63961.t1 | AT5G51410 | 79.259 | 270 | 55 | 1 | 1 | 269 | 1 | 270 | 9.15e-155 | 437 |
| MS.gene63961.t1 | AT5G51410 | 79.259 | 270 | 55 | 1 | 1 | 269 | 1 | 270 | 9.15e-155 | 437 |
| MS.gene63961.t1 | AT3G03340 | 30.526 | 190 | 115 | 5 | 1 | 186 | 1 | 177 | 7.98e-17 | 81.3 |
| MS.gene63961.t1 | AT3G03340 | 31.313 | 198 | 97 | 7 | 116 | 300 | 198 | 369 | 5.71e-12 | 66.6 |
| MS.gene63961.t1 | AT3G03340 | 30.526 | 190 | 115 | 5 | 1 | 186 | 79 | 255 | 1.92e-16 | 80.5 |
| MS.gene63961.t1 | AT3G03340 | 31.313 | 198 | 97 | 7 | 116 | 300 | 276 | 447 | 5.90e-12 | 67.0 |
| MS.gene63961.t1 | AT5G17440 | 30.159 | 189 | 115 | 5 | 1 | 185 | 1 | 176 | 3.44e-16 | 79.3 |
| MS.gene63961.t1 | AT5G17440 | 33.846 | 130 | 71 | 3 | 117 | 241 | 199 | 318 | 3.00e-13 | 70.5 |
| MS.gene63961.t1 | AT5G17440 | 35.345 | 116 | 65 | 3 | 1 | 114 | 1 | 108 | 6.46e-16 | 77.4 |
| MS.gene63961.t1 | AT3G03340 | 30.526 | 190 | 115 | 5 | 1 | 186 | 1 | 177 | 7.76e-16 | 77.8 |
| MS.gene63961.t1 | AT3G03340 | 35.537 | 121 | 61 | 4 | 116 | 230 | 198 | 307 | 7.54e-13 | 68.9 |
Find 76 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCTGTAGTTATGCTTAAT+AGG | 0.142913 | 4.1:-56325310 | None:intergenic |
| GCAAGATCGGCTTCAAATTT+AGG | 0.292888 | 4.1:-56324210 | None:intergenic |
| TTCTGTAGTTATGCTTAATA+GGG | 0.331026 | 4.1:-56325309 | None:intergenic |
| GGAAGTTTGTGGTTTCTATA+TGG | 0.332001 | 4.1:+56322283 | MS.gene63961:CDS |
| GGAGAAAATAAAGAACCTTC+TGG | 0.354149 | 4.1:+56324466 | MS.gene63961:CDS |
| GTTGAATCTCTTGGTGAAGC+TGG | 0.375956 | 4.1:+56324494 | MS.gene63961:CDS |
| GCACGTATGCATCATGCCTT+GGG | 0.388877 | 4.1:-56324188 | None:intergenic |
| GACGGGGTGATTCAAGTGAT+AGG | 0.410658 | 4.1:+56325098 | MS.gene63961:CDS |
| CTCGACGAACTCATGGGTTC+AGG | 0.418323 | 4.1:+56322125 | MS.gene63961:CDS |
| ATCTGAACAGTTGTCTGTCC+TGG | 0.430404 | 4.1:+56324442 | MS.gene63961:CDS |
| CTGGAACAAGTTGAATCTCT+TGG | 0.435647 | 4.1:+56324485 | MS.gene63961:CDS |
| TGGGACGATAAGGAAGTTTG+TGG | 0.435949 | 4.1:+56322272 | MS.gene63961:CDS |
| GGCACGTATGCATCATGCCT+TGG | 0.438040 | 4.1:-56324189 | None:intergenic |
| AGCTCTCCTCGACGAACTCA+TGG | 0.445844 | 4.1:+56322118 | MS.gene63961:CDS |
| CTCACAAAACTGAGCAAGAT+CGG | 0.453847 | 4.1:-56324223 | None:intergenic |
| GGTAATCGAGATCGAGGAAG+GGG | 0.456957 | 4.1:+56325214 | MS.gene63961:CDS |
| AGAAGTGAGTTGGGACGATA+AGG | 0.483654 | 4.1:+56322262 | MS.gene63961:CDS |
| ACTCGGATCGTGAAAGATCT+CGG | 0.487797 | 4.1:+56325176 | MS.gene63961:CDS |
| GCAGAGACAGGTACCACAAT+CGG | 0.490454 | 4.1:+56325272 | MS.gene63961:CDS |
| ATAATCACAGGTGATGGACT+TGG | 0.491646 | 4.1:+56324340 | MS.gene63961:intron |
| TCACCCCGTCTCTTTCTCTC+AGG | 0.493705 | 4.1:-56325085 | None:intergenic |
| GGATCCTGAGAGAAAGAGAC+GGG | 0.496110 | 4.1:+56325081 | MS.gene63961:CDS |
| AGAAGAGCGAAGAAAACAAA+AGG | 0.502735 | 4.1:+56325054 | MS.gene63961:CDS |
| GCTGTCAGTGGTGGCGGTGG+TGG | 0.503620 | 4.1:-56324413 | None:intergenic |
| GTCAACACGCGCAGTGATCT+CGG | 0.505201 | 4.1:+56322332 | MS.gene63961:CDS |
| GCGAAGAAAACAAAAGGAGC+AGG | 0.514193 | 4.1:+56325060 | MS.gene63961:CDS |
| CTCGGATCGTGAAAGATCTC+GGG | 0.514400 | 4.1:+56325177 | MS.gene63961:CDS |
| ATCGAGATAGGCAGCGTGAT+AGG | 0.514417 | 4.1:+56325140 | MS.gene63961:CDS |
| ATCTCTTGGTGAAGCTGGGA+AGG | 0.515528 | 4.1:+56324499 | MS.gene63961:CDS |
| GGGTTACAAAGAAGTGAGTT+GGG | 0.517957 | 4.1:+56322253 | MS.gene63961:CDS |
| TTGAATCTCTTGGTGAAGCT+GGG | 0.520092 | 4.1:+56324495 | MS.gene63961:CDS |
| GGAAAGCAGCATGTTGGCTA+TGG | 0.524490 | 4.1:+56324861 | MS.gene63961:CDS |
| GGGGTTACAAAGAAGTGAGT+TGG | 0.527552 | 4.1:+56322252 | MS.gene63961:CDS |
| GAGGTAATCGAGATCGAGGA+AGG | 0.532185 | 4.1:+56325212 | MS.gene63961:CDS |
| GAGATTCAACTTGTTCCAGA+AGG | 0.534767 | 4.1:-56324481 | None:intergenic |
| AGCTGAAGCTCTTATGAGAA+AGG | 0.541211 | 4.1:+56324529 | MS.gene63961:CDS |
| CTTGACTGAGGAAGAAAGAA+GGG | 0.550258 | 4.1:+56322232 | MS.gene63961:CDS |
| ACTTGACTGAGGAAGAAAGA+AGG | 0.553452 | 4.1:+56322231 | MS.gene63961:CDS |
| GATTGCTAAGGAGAAGGCTA+AGG | 0.554953 | 4.1:+56325000 | MS.gene63961:intron |
| TCAGCTGTCAGTGGTGGCGG+TGG | 0.557872 | 4.1:-56324416 | None:intergenic |
| GGAAGAAGAAAGATTGACTC+GGG | 0.558620 | 4.1:+56325021 | MS.gene63961:CDS |
| AGAACTCAGTCTCATGTCGC+AGG | 0.559633 | 4.1:+56324840 | MS.gene63961:CDS |
| GAAAGATCTCGGGAATATGA+AGG | 0.563627 | 4.1:+56325187 | MS.gene63961:CDS |
| GCAGCATGTTGGCTATGGTA+TGG | 0.570060 | 4.1:+56324866 | MS.gene63961:CDS |
| ACGGGGTGATTCAAGTGATA+GGG | 0.570473 | 4.1:+56325099 | MS.gene63961:CDS |
| TCTCGGGAATATGAAGGTAG+AGG | 0.580782 | 4.1:+56325193 | MS.gene63961:CDS |
| CTATTAAGCATAACTACAGA+AGG | 0.587485 | 4.1:+56325311 | MS.gene63961:CDS |
| GCTCTCCTCGACGAACTCAT+GGG | 0.594522 | 4.1:+56322119 | MS.gene63961:CDS |
| AACGTGATCTGCTCCGATTG+TGG | 0.597216 | 4.1:-56325285 | None:intergenic |
| TGACTTCATAAATGAATACA+AGG | 0.598021 | 4.1:+56324893 | MS.gene63961:CDS |
| AGGATCCTGAGAGAAAGAGA+CGG | 0.600463 | 4.1:+56325080 | MS.gene63961:CDS |
| AGGAAGAAGAAAGATTGACT+CGG | 0.603218 | 4.1:+56325020 | MS.gene63961:CDS |
| GGTAGAGGTAATCGAGATCG+AGG | 0.605352 | 4.1:+56325208 | MS.gene63961:CDS |
| GTCGCAGGAAAGCAGCATGT+TGG | 0.607800 | 4.1:+56324855 | MS.gene63961:CDS |
| AGGTAATCGAGATCGAGGAA+GGG | 0.610688 | 4.1:+56325213 | MS.gene63961:CDS |
| AATGCTTCAGGAGAAGAAGA+TGG | 0.611727 | 4.1:+56324767 | MS.gene63961:CDS |
| ATCGTGATAAAGATCGAGAT+AGG | 0.617765 | 4.1:+56325128 | MS.gene63961:CDS |
| TCTGTAGTTATGCTTAATAG+GGG | 0.619225 | 4.1:-56325308 | None:intergenic |
| GGTATGTGGTTCGTTTCTCG+TGG | 0.623915 | 4.1:+56324800 | MS.gene63961:CDS |
| ATGGCACTCTGTGAGGTATG+TGG | 0.625178 | 4.1:+56324786 | MS.gene63961:CDS |
| GGAGACACTTAATACTGAGA+AGG | 0.634366 | 4.1:+56324710 | MS.gene63961:CDS |
| TGAACAGTTGTCTGTCCTGG+AGG | 0.636803 | 4.1:+56324445 | MS.gene63961:CDS |
| GTGTTGACGAAGAGATCGTG+AGG | 0.645071 | 4.1:-56322317 | None:intergenic |
| ACGAGAACGTCTTAATCAAG+AGG | 0.649224 | 4.1:+56324382 | MS.gene63961:CDS |
| ATGGTTTCTAGGTTGAGGAA+CGG | 0.651338 | 4.1:+56325238 | MS.gene63961:CDS |
| GAAGAAGATGGCACTCTGTG+AGG | 0.661944 | 4.1:+56324779 | MS.gene63961:CDS |
| AGAACGTCTTAATCAAGAGG+TGG | 0.666877 | 4.1:+56324385 | MS.gene63961:CDS |
| TTCAGCTCGAAACTTGACTG+AGG | 0.672653 | 4.1:+56322220 | MS.gene63961:intron |
| TTGACTGAGGAAGAAAGAAG+GGG | 0.676867 | 4.1:+56322233 | MS.gene63961:CDS |
| CACGTATGCATCATGCCTTG+GGG | 0.690040 | 4.1:-56324187 | None:intergenic |
| GTAATCGAGATCGAGGAAGG+GGG | 0.692537 | 4.1:+56325215 | MS.gene63961:CDS |
| TAGGTACAGAGATAGAGACT+CGG | 0.703615 | 4.1:+56325159 | MS.gene63961:CDS |
| TGTTGACGAAGAGATCGTGA+GGG | 0.727468 | 4.1:-56322316 | None:intergenic |
| CTGAACCCATGAGTTCGTCG+AGG | 0.733418 | 4.1:-56322124 | None:intergenic |
| GATCCTGAGAGAAAGAGACG+GGG | 0.755999 | 4.1:+56325082 | MS.gene63961:CDS |
| TTGGATAGAAGAGTAAAACG+TGG | 0.775215 | 4.1:+56324359 | MS.gene63961:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTTTATATTAAATATA+TGG | + | chr4.1:56323118-56323137 | MS.gene63961:intron | 0.0% |
| !! | AATTATTTATAAGTATGTTA+AGG | + | chr4.1:56322533-56322552 | MS.gene63961:intron | 10.0% |
| !! | ATAAATGTATAGATTAATTT+AGG | - | chr4.1:56324929-56324948 | None:intergenic | 10.0% |
| !! | ATTGACATTCAAATTTAATA+CGG | - | chr4.1:56323814-56323833 | None:intergenic | 15.0% |
| !! | GTTCAAAAAATTATTAATCT+TGG | + | chr4.1:56323173-56323192 | MS.gene63961:intron | 15.0% |
| !! | AAGGGTTAACAAAAAAAATT+AGG | - | chr4.1:56323776-56323795 | None:intergenic | 20.0% |
| !! | AGGGTTAACAAAAAAAATTA+GGG | - | chr4.1:56323775-56323794 | None:intergenic | 20.0% |
| !! | GAAATCAAAAAACAATTTAC+TGG | - | chr4.1:56324098-56324117 | None:intergenic | 20.0% |
| !! | TTGACATTCAAATTTAATAC+GGG | - | chr4.1:56323813-56323832 | None:intergenic | 20.0% |
| !!! | AAAGGATAAGAAACTTTTAA+AGG | - | chr4.1:56323912-56323931 | None:intergenic | 20.0% |
| !!! | AAGGATAAGAAACTTTTAAA+GGG | - | chr4.1:56323911-56323930 | None:intergenic | 20.0% |
| !!! | ATATTTTACTTTGTCATGTA+TGG | + | chr4.1:56323934-56323953 | MS.gene63961:intron | 20.0% |
| !!! | ATTAACACTTTTTCATTTTG+AGG | - | chr4.1:56324750-56324769 | None:intergenic | 20.0% |
| !!! | GCATTTTATGCTTTATTTAT+CGG | - | chr4.1:56324076-56324095 | None:intergenic | 20.0% |
| ! | AAATGTTACAAATGAGAATG+AGG | + | chr4.1:56322432-56322451 | MS.gene63961:intron | 25.0% |
| ! | AACATATGCCTATGATAATT+TGG | + | chr4.1:56323965-56323984 | MS.gene63961:intron | 25.0% |
| ! | AATAGTATACACAAGGAAAA+GGG | - | chr4.1:56324574-56324593 | None:intergenic | 25.0% |
| ! | AATCATCAATAGTATACACA+AGG | - | chr4.1:56324581-56324600 | None:intergenic | 25.0% |
| ! | ACAAGTTAATTTCTACGATT+GGG | - | chr4.1:56324621-56324640 | None:intergenic | 25.0% |
| ! | TGACAAAGTAAAATATGCAA+AGG | - | chr4.1:56323930-56323949 | None:intergenic | 25.0% |
| ! | TGACTTCATAAATGAATACA+AGG | + | chr4.1:56324893-56324912 | MS.gene63961:CDS | 25.0% |
| ! | TTCTGTAGTTATGCTTAATA+GGG | - | chr4.1:56325312-56325331 | None:intergenic | 25.0% |
| ! | TTTCAAATTATTAGCTGTGT+CGG | - | chr4.1:56322634-56322653 | None:intergenic | 25.0% |
| !! | ATGAAATAGTTTGAGATTTC+TGG | + | chr4.1:56323520-56323539 | MS.gene63961:intron | 25.0% |
| !! | CTTATTAACTGTGATAGTTT+TGG | + | chr4.1:56323372-56323391 | MS.gene63961:intron | 25.0% |
| !! | TTTTTAATGTAGAATGAGGA+TGG | - | chr4.1:56324274-56324293 | None:intergenic | 25.0% |
| !!! | ACTGTTTTTAATGTAGAATG+AGG | - | chr4.1:56324278-56324297 | None:intergenic | 25.0% |
| !!! | ATTAGTTTTCTGACATAATC+AGG | - | chr4.1:56323588-56323607 | None:intergenic | 25.0% |
| !!! | TGCAATGTTTTTGAAAATCA+CGG | - | chr4.1:56322873-56322892 | None:intergenic | 25.0% |
| !!! | TTTGACTTTTTGTTCGTATT+TGG | + | chr4.1:56323048-56323067 | MS.gene63961:intron | 25.0% |
| !!! | TTTTTGTTCGTATTTGGAAT+AGG | + | chr4.1:56323054-56323073 | MS.gene63961:intron | 25.0% |
| AAACTCAGTTACACATTTAC+GGG | - | chr4.1:56324120-56324139 | None:intergenic | 30.0% | |
| AACTTATGAACTATGAAGCA+TGG | + | chr4.1:56322573-56322592 | MS.gene63961:intron | 30.0% | |
| AAGTTCATTCTGTTTCATGT+AGG | - | chr4.1:56323289-56323308 | None:intergenic | 30.0% | |
| AATTTCATGACTCGTTCAAT+TGG | + | chr4.1:56323831-56323850 | MS.gene63961:intron | 30.0% | |
| ACGAACAAAAAGTCAAAGAT+TGG | - | chr4.1:56323045-56323064 | None:intergenic | 30.0% | |
| ATTTCATGACTCGTTCAATT+GGG | + | chr4.1:56323832-56323851 | MS.gene63961:intron | 30.0% | |
| CAAGTTAATTTCTACGATTG+GGG | - | chr4.1:56324620-56324639 | None:intergenic | 30.0% | |
| CAATAGTATACACAAGGAAA+AGG | - | chr4.1:56324575-56324594 | None:intergenic | 30.0% | |
| CACAAGTTAATTTCTACGAT+TGG | - | chr4.1:56324622-56324641 | None:intergenic | 30.0% | |
| CTAAAATAAGCCAATCCAAA+CGG | - | chr4.1:56322471-56322490 | None:intergenic | 30.0% | |
| CTATTAAGCATAACTACAGA+AGG | + | chr4.1:56325311-56325330 | MS.gene63961:CDS | 30.0% | |
| CTTCTGTAGTTATGCTTAAT+AGG | - | chr4.1:56325313-56325332 | None:intergenic | 30.0% | |
| GAAACTCAGTTACACATTTA+CGG | - | chr4.1:56324121-56324140 | None:intergenic | 30.0% | |
| TAATACAGTAATTGACACCT+AGG | - | chr4.1:56323258-56323277 | None:intergenic | 30.0% | |
| TACGCATACCAAATTATCAT+AGG | - | chr4.1:56323976-56323995 | None:intergenic | 30.0% | |
| TATTCATAAGCTATGAAGCA+CGG | - | chr4.1:56322742-56322761 | None:intergenic | 30.0% | |
| TCTGTAGTTATGCTTAATAG+GGG | - | chr4.1:56325311-56325330 | None:intergenic | 30.0% | |
| TGAATTGACACAAAATTCCA+TGG | - | chr4.1:56322916-56322935 | None:intergenic | 30.0% | |
| TTCATAAGCTCAATCTAAAC+AGG | + | chr4.1:56322826-56322845 | MS.gene63961:intron | 30.0% | |
| ! | CTTTATTTATCGGCATATCA+TGG | - | chr4.1:56324066-56324085 | None:intergenic | 30.0% |
| ! | TTCTTCTTTTCAGATTGCTA+AGG | + | chr4.1:56324988-56325007 | MS.gene63961:intron | 30.0% |
| !! | CTTACTTTTCTTTCAACTTC+GGG | - | chr4.1:56323464-56323483 | None:intergenic | 30.0% |
| !! | CTTTTAAAGGGAAGCAATAT+TGG | - | chr4.1:56323899-56323918 | None:intergenic | 30.0% |
| !! | GCAATGTTTTTGAAAATCAC+GGG | - | chr4.1:56322872-56322891 | None:intergenic | 30.0% |
| !! | GCTTACTTTTCTTTCAACTT+CGG | - | chr4.1:56323465-56323484 | None:intergenic | 30.0% |
| !! | TAAGATCTTTAGAGTTGAAG+AGG | - | chr4.1:56323356-56323375 | None:intergenic | 30.0% |
| !! | TGAAAAAGTGTTAATGCTTC+AGG | + | chr4.1:56324755-56324774 | MS.gene63961:CDS | 30.0% |
| !! | TGTTTTCTGGTAATAATCAC+AGG | + | chr4.1:56324328-56324347 | MS.gene63961:intron | 30.0% |
| !!! | CTCGTGAATTTATTTTTTCG+CGG | + | chr4.1:56324669-56324688 | MS.gene63961:intron | 30.0% |
| !!! | TCGTGAATTTATTTTTTCGC+GGG | + | chr4.1:56324670-56324689 | MS.gene63961:intron | 30.0% |
| !!! | TTAACTGTGATAGTTTTGGT+TGG | + | chr4.1:56323376-56323395 | MS.gene63961:intron | 30.0% |
| AAAGGGAAGCAATATTGGTA+CGG | - | chr4.1:56323894-56323913 | None:intergenic | 35.0% | |
| AGAAGAGCGAAGAAAACAAA+AGG | + | chr4.1:56325054-56325073 | MS.gene63961:CDS | 35.0% | |
| AGGAAGAAGAAAGATTGACT+CGG | + | chr4.1:56325020-56325039 | MS.gene63961:CDS | 35.0% | |
| ATCGTGATAAAGATCGAGAT+AGG | + | chr4.1:56325128-56325147 | MS.gene63961:CDS | 35.0% | |
| GGAAGTTTGTGGTTTCTATA+TGG | + | chr4.1:56322283-56322302 | MS.gene63961:CDS | 35.0% | |
| GGAGAAAATAAAGAACCTTC+TGG | + | chr4.1:56324466-56324485 | MS.gene63961:CDS | 35.0% | |
| GTTACAAATGAGAATGAGGA+AGG | + | chr4.1:56322436-56322455 | MS.gene63961:intron | 35.0% | |
| TTGGATAGAAGAGTAAAACG+TGG | + | chr4.1:56324359-56324378 | MS.gene63961:CDS | 35.0% | |
| TTTCATGACTCGTTCAATTG+GGG | + | chr4.1:56323833-56323852 | MS.gene63961:intron | 35.0% | |
| ! | AACTTCGGGTCATGTATTTT+CGG | - | chr4.1:56323450-56323469 | None:intergenic | 35.0% |
| ! | CTGATGTTCTTCATGTTTTC+TGG | + | chr4.1:56324315-56324334 | MS.gene63961:intron | 35.0% |
| ! | TTTTCAGATTGCTAAGGAGA+AGG | + | chr4.1:56324994-56325013 | MS.gene63961:intron | 35.0% |
| !! | CAGTTTTGTGAGAAATTGGT+AGG | + | chr4.1:56324234-56324253 | MS.gene63961:intron | 35.0% |
| !! | TGCTCAGTTTTGTGAGAAAT+TGG | + | chr4.1:56324230-56324249 | MS.gene63961:CDS | 35.0% |
| AATGCTTCAGGAGAAGAAGA+TGG | + | chr4.1:56324767-56324786 | MS.gene63961:CDS | 40.0% | |
| ACGAGAACGTCTTAATCAAG+AGG | + | chr4.1:56324382-56324401 | MS.gene63961:CDS | 40.0% | |
| ACTTGACTGAGGAAGAAAGA+AGG | + | chr4.1:56322231-56322250 | MS.gene63961:CDS | 40.0% | |
| AGAACGTCTTAATCAAGAGG+TGG | + | chr4.1:56324385-56324404 | MS.gene63961:CDS | 40.0% | |
| AGCTGAAGCTCTTATGAGAA+AGG | + | chr4.1:56324529-56324548 | MS.gene63961:CDS | 40.0% | |
| AGGTTGAGGAACGGAAAAAA+TGG | + | chr4.1:56325247-56325266 | MS.gene63961:CDS | 40.0% | |
| ATGAGAATGAGGAAGGACTT+TGG | + | chr4.1:56322443-56322462 | MS.gene63961:intron | 40.0% | |
| ATTAAGCGATCTTAGTGCTG+TGG | + | chr4.1:56323724-56323743 | MS.gene63961:intron | 40.0% | |
| CTCACAAAACTGAGCAAGAT+CGG | - | chr4.1:56324226-56324245 | None:intergenic | 40.0% | |
| CTGGTAATAATCACAGGTGA+TGG | + | chr4.1:56324334-56324353 | MS.gene63961:intron | 40.0% | |
| CTTGACTGAGGAAGAAAGAA+GGG | + | chr4.1:56322232-56322251 | MS.gene63961:CDS | 40.0% | |
| GAAAAAATGGAAGCAGAGAC+AGG | + | chr4.1:56325260-56325279 | MS.gene63961:CDS | 40.0% | |
| GAAAGATCTCGGGAATATGA+AGG | + | chr4.1:56325187-56325206 | MS.gene63961:CDS | 40.0% | |
| GAACATCAGCATACAAGCAA+AGG | - | chr4.1:56324304-56324323 | None:intergenic | 40.0% | |
| GATTAGGTGTGTCTTGTAGT+CGG | - | chr4.1:56322709-56322728 | None:intergenic | 40.0% | |
| GGAGACACTTAATACTGAGA+AGG | + | chr4.1:56324710-56324729 | MS.gene63961:CDS | 40.0% | |
| GGGTTACAAAGAAGTGAGTT+GGG | + | chr4.1:56322253-56322272 | MS.gene63961:CDS | 40.0% | |
| GTAGTGTGATATTGCATCCA+TGG | + | chr4.1:56322896-56322915 | MS.gene63961:intron | 40.0% | |
| TAACGTGTTTAAACCGATGC+AGG | + | chr4.1:56323417-56323436 | MS.gene63961:intron | 40.0% | |
| TACAAGTGTTAGTGTCGTGT+CGG | + | chr4.1:56322676-56322695 | MS.gene63961:intron | 40.0% | |
| TAGGTACAGAGATAGAGACT+CGG | + | chr4.1:56325159-56325178 | MS.gene63961:CDS | 40.0% | |
| TATACACAAGGAAAAGGGTG+TGG | - | chr4.1:56324569-56324588 | None:intergenic | 40.0% | |
| TGAGAATGAGGAAGGACTTT+GGG | + | chr4.1:56322444-56322463 | MS.gene63961:intron | 40.0% | |
| TTGAATCTCTTGGTGAAGCT+GGG | + | chr4.1:56324495-56324514 | MS.gene63961:CDS | 40.0% | |
| TTGACTGAGGAAGAAAGAAG+GGG | + | chr4.1:56322233-56322252 | MS.gene63961:CDS | 40.0% | |
| ! | ACTTCGGGTCATGTATTTTC+GGG | - | chr4.1:56323449-56323468 | None:intergenic | 40.0% |
| ! | ATGGTTTCTAGGTTGAGGAA+CGG | + | chr4.1:56325238-56325257 | MS.gene63961:CDS | 40.0% |
| ! | CAAAAAGTCAAAGATTGGCC+AGG | - | chr4.1:56323040-56323059 | None:intergenic | 40.0% |
| ! | CGGGATATTTTTCTTTCAGG+TGG | + | chr4.1:56324689-56324708 | MS.gene63961:intron | 40.0% |
| ! | CTGGAACAAGTTGAATCTCT+TGG | + | chr4.1:56324485-56324504 | MS.gene63961:CDS | 40.0% |
| ! | GAGATTCAACTTGTTCCAGA+AGG | - | chr4.1:56324484-56324503 | None:intergenic | 40.0% |
| ! | GCAAGATCGGCTTCAAATTT+AGG | - | chr4.1:56324213-56324232 | None:intergenic | 40.0% |
| ! | GGAAGAAGAAAGATTGACTC+GGG | + | chr4.1:56325021-56325040 | MS.gene63961:CDS | 40.0% |
| ! | TCGCGGGATATTTTTCTTTC+AGG | + | chr4.1:56324686-56324705 | MS.gene63961:intron | 40.0% |
| ! | TTGGTACGGTGCACTTTTAA+TGG | - | chr4.1:56323880-56323899 | None:intergenic | 40.0% |
| !! | AAGATTGACTCGGGAAAAAG+AGG | + | chr4.1:56325030-56325049 | MS.gene63961:CDS | 40.0% |
| !! | ATAATCACAGGTGATGGACT+TGG | + | chr4.1:56324340-56324359 | MS.gene63961:intron | 40.0% |
| !! | TCAGATTTTTCAGCTGTCAG+TGG | - | chr4.1:56324428-56324447 | None:intergenic | 40.0% |
| !!! | GGTTCTTTATTTTCTCCTCC+AGG | - | chr4.1:56324463-56324482 | None:intergenic | 40.0% |
| !!! | TCAGTTTTGAGAATTCCCCA+AGG | + | chr4.1:56324172-56324191 | MS.gene63961:intron | 40.0% |
| ACAATAGAGCAACCATGTGC+GGG | - | chr4.1:56324016-56324035 | None:intergenic | 45.0% | |
| ACGGGGTGATTCAAGTGATA+GGG | + | chr4.1:56325099-56325118 | MS.gene63961:CDS | 45.0% | |
| ACGGGTAGCATACACTCAAA+AGG | - | chr4.1:56323795-56323814 | None:intergenic | 45.0% | |
| ACTCGGATCGTGAAAGATCT+CGG | + | chr4.1:56325176-56325195 | MS.gene63961:CDS | 45.0% | |
| AGGATCCTGAGAGAAAGAGA+CGG | + | chr4.1:56325080-56325099 | MS.gene63961:CDS | 45.0% | |
| AGGTAATCGAGATCGAGGAA+GGG | + | chr4.1:56325213-56325232 | MS.gene63961:CDS | 45.0% | |
| ATCTGAACAGTTGTCTGTCC+TGG | + | chr4.1:56324442-56324461 | MS.gene63961:CDS | 45.0% | |
| CACAATAGAGCAACCATGTG+CGG | - | chr4.1:56324017-56324036 | None:intergenic | 45.0% | |
| CGGGTAGCATACACTCAAAA+GGG | - | chr4.1:56323794-56323813 | None:intergenic | 45.0% | |
| GAATGAGGATGGCAACAGAT+AGG | - | chr4.1:56324263-56324282 | None:intergenic | 45.0% | |
| GATTGCTAAGGAGAAGGCTA+AGG | + | chr4.1:56325000-56325019 | MS.gene63961:intron | 45.0% | |
| GCGAAGAAAACAAAAGGAGC+AGG | + | chr4.1:56325060-56325079 | MS.gene63961:CDS | 45.0% | |
| GGGGTTACAAAGAAGTGAGT+TGG | + | chr4.1:56322252-56322271 | MS.gene63961:CDS | 45.0% | |
| GTTGAATCTCTTGGTGAAGC+TGG | + | chr4.1:56324494-56324513 | MS.gene63961:CDS | 45.0% | |
| TACAAGACACACCTAATCCG+AGG | + | chr4.1:56322711-56322730 | MS.gene63961:intron | 45.0% | |
| TACTGTGTCAGTGTCAACCT+AGG | + | chr4.1:56322940-56322959 | MS.gene63961:intron | 45.0% | |
| TATGAAGCACGGATACTCCT+CGG | - | chr4.1:56322731-56322750 | None:intergenic | 45.0% | |
| TCTCGGGAATATGAAGGTAG+AGG | + | chr4.1:56325193-56325212 | MS.gene63961:CDS | 45.0% | |
| TGAAGCATGGATACAGACAC+TGG | + | chr4.1:56322586-56322605 | MS.gene63961:intron | 45.0% | |
| TGGGACGATAAGGAAGTTTG+TGG | + | chr4.1:56322272-56322291 | MS.gene63961:CDS | 45.0% | |
| TGTTGACGAAGAGATCGTGA+GGG | - | chr4.1:56322319-56322338 | None:intergenic | 45.0% | |
| TTCAGCTCGAAACTTGACTG+AGG | + | chr4.1:56322220-56322239 | MS.gene63961:intron | 45.0% | |
| ! | AGAAGTGAGTTGGGACGATA+AGG | + | chr4.1:56322262-56322281 | MS.gene63961:CDS | 45.0% |
| ! | CGATCGATTTATCGAGTGAG+TGG | - | chr4.1:56322179-56322198 | None:intergenic | 45.0% |
| ! | GGGCTGCAGTTGATTTCAAA+GGG | - | chr4.1:56322852-56322871 | None:intergenic | 45.0% |
| !! | AATTGTTGACTCAGCCACTG+AGG | + | chr4.1:56323645-56323664 | MS.gene63961:intron | 45.0% |
| !! | GATTTTTCAGCTGTCAGTGG+TGG | - | chr4.1:56324425-56324444 | None:intergenic | 45.0% |
| AACGTGATCTGCTCCGATTG+TGG | - | chr4.1:56325288-56325307 | None:intergenic | 50.0% | |
| ACGCACATGTGAAACCTCAG+TGG | - | chr4.1:56323662-56323681 | None:intergenic | 50.0% | |
| AGAACTCAGTCTCATGTCGC+AGG | + | chr4.1:56324840-56324859 | MS.gene63961:CDS | 50.0% | |
| AGGTAGTCAATCCCGGATAG+CGG | - | chr4.1:56323238-56323257 | None:intergenic | 50.0% | |
| ATCGAGATAGGCAGCGTGAT+AGG | + | chr4.1:56325140-56325159 | MS.gene63961:CDS | 50.0% | |
| ATCTCTTGGTGAAGCTGGGA+AGG | + | chr4.1:56324499-56324518 | MS.gene63961:CDS | 50.0% | |
| ATGGCACTCTGTGAGGTATG+TGG | + | chr4.1:56324786-56324805 | MS.gene63961:CDS | 50.0% | |
| CACGTATGCATCATGCCTTG+GGG | - | chr4.1:56324190-56324209 | None:intergenic | 50.0% | |
| CCTGGCAAATCCCAAAGTAG+CGG | + | chr4.1:56322971-56322990 | MS.gene63961:intron | 50.0% | |
| CTATCCGGGATTGACTACCT+AGG | + | chr4.1:56323238-56323257 | MS.gene63961:intron | 50.0% | |
| CTCGGATCGTGAAAGATCTC+GGG | + | chr4.1:56325177-56325196 | MS.gene63961:CDS | 50.0% | |
| GAAGAAGATGGCACTCTGTG+AGG | + | chr4.1:56324779-56324798 | MS.gene63961:CDS | 50.0% | |
| GACACCTAGGTAGTCAATCC+CGG | - | chr4.1:56323245-56323264 | None:intergenic | 50.0% | |
| GACGGGGTGATTCAAGTGAT+AGG | + | chr4.1:56325098-56325117 | MS.gene63961:CDS | 50.0% | |
| GACTCGTTCAATTGGGGCTA+TGG | + | chr4.1:56323839-56323858 | MS.gene63961:intron | 50.0% | |
| GACTTTGGGTCCGTTTGGAT+TGG | + | chr4.1:56322458-56322477 | MS.gene63961:intron | 50.0% | |
| GAGGTAATCGAGATCGAGGA+AGG | + | chr4.1:56325212-56325231 | MS.gene63961:CDS | 50.0% | |
| GATCCTGAGAGAAAGAGACG+GGG | + | chr4.1:56325082-56325101 | MS.gene63961:CDS | 50.0% | |
| GCACGTATGCATCATGCCTT+GGG | - | chr4.1:56324191-56324210 | None:intergenic | 50.0% | |
| GCAGAGACAGGTACCACAAT+CGG | + | chr4.1:56325272-56325291 | MS.gene63961:CDS | 50.0% | |
| GGATCCTGAGAGAAAGAGAC+GGG | + | chr4.1:56325081-56325100 | MS.gene63961:CDS | 50.0% | |
| GGTAATCGAGATCGAGGAAG+GGG | + | chr4.1:56325214-56325233 | MS.gene63961:CDS | 50.0% | |
| GGTAGAGGTAATCGAGATCG+AGG | + | chr4.1:56325208-56325227 | MS.gene63961:CDS | 50.0% | |
| GGTATGTGGTTCGTTTCTCG+TGG | + | chr4.1:56324800-56324819 | MS.gene63961:CDS | 50.0% | |
| GTAATCGAGATCGAGGAAGG+GGG | + | chr4.1:56325215-56325234 | MS.gene63961:CDS | 50.0% | |
| TCAACCTAGGCAGTCAATCC+TGG | + | chr4.1:56322953-56322972 | MS.gene63961:intron | 50.0% | |
| TGAACAGTTGTCTGTCCTGG+AGG | + | chr4.1:56324445-56324464 | MS.gene63961:CDS | 50.0% | |
| TGAGGATGGCAACAGATAGG+TGG | - | chr4.1:56324260-56324279 | None:intergenic | 50.0% | |
| TTTGCCAGGATTGACTGCCT+AGG | - | chr4.1:56322960-56322979 | None:intergenic | 50.0% | |
| ! | CGGGCTGCAGTTGATTTCAA+AGG | - | chr4.1:56322853-56322872 | None:intergenic | 50.0% |
| ! | GCAGCATGTTGGCTATGGTA+TGG | + | chr4.1:56324866-56324885 | MS.gene63961:CDS | 50.0% |
| ! | GGAAAGCAGCATGTTGGCTA+TGG | + | chr4.1:56324861-56324880 | MS.gene63961:CDS | 50.0% |
| ! | GTGTTGACGAAGAGATCGTG+AGG | - | chr4.1:56322320-56322339 | None:intergenic | 50.0% |
| ! | TCAGGCTGATCCGCTACTTT+GGG | - | chr4.1:56322984-56323003 | None:intergenic | 50.0% |
| ! | TTTTCAGCTGTCAGTGGTGG+CGG | - | chr4.1:56324422-56324441 | None:intergenic | 50.0% |
| !! | AAAGTAGCGGATCAGCCTGA+GGG | + | chr4.1:56322984-56323003 | MS.gene63961:intron | 50.0% |
| AGAGGATTTCGTCGCGATCC+TGG | + | chr4.1:56323019-56323038 | MS.gene63961:intron | 55.0% | |
| AGCTCTCCTCGACGAACTCA+TGG | + | chr4.1:56322118-56322137 | MS.gene63961:CDS | 55.0% | |
| CAGCCTGAGGGAAATTGCGA+CGG | + | chr4.1:56322996-56323015 | MS.gene63961:intron | 55.0% | |
| CTCAGGCTGATCCGCTACTT+TGG | - | chr4.1:56322985-56323004 | None:intergenic | 55.0% | |
| CTCGACGAACTCATGGGTTC+AGG | + | chr4.1:56322125-56322144 | MS.gene63961:CDS | 55.0% | |
| CTGAACCCATGAGTTCGTCG+AGG | - | chr4.1:56322127-56322146 | None:intergenic | 55.0% | |
| GAGGAAGGGGGATGGTTTCT+AGG | + | chr4.1:56325227-56325246 | MS.gene63961:CDS | 55.0% | |
| GCACGGATACTCCTCGGATT+AGG | - | chr4.1:56322725-56322744 | None:intergenic | 55.0% | |
| GCTCTCCTCGACGAACTCAT+GGG | + | chr4.1:56322119-56322138 | MS.gene63961:CDS | 55.0% | |
| GGAAGGACTTTGGGTCCGTT+TGG | + | chr4.1:56322453-56322472 | MS.gene63961:intron | 55.0% | |
| GGCACGTATGCATCATGCCT+TGG | - | chr4.1:56324192-56324211 | None:intergenic | 55.0% | |
| GTCAACACGCGCAGTGATCT+CGG | + | chr4.1:56322332-56322351 | MS.gene63961:CDS | 55.0% | |
| GTCGCAGGAAAGCAGCATGT+TGG | + | chr4.1:56324855-56324874 | MS.gene63961:CDS | 55.0% | |
| TCACCCCGTCTCTTTCTCTC+AGG | - | chr4.1:56325088-56325107 | None:intergenic | 55.0% | |
| TCTCCGTCGCAATTTCCCTC+AGG | - | chr4.1:56323002-56323021 | None:intergenic | 55.0% | |
| TGAGGGAAATTGCGACGGAG+AGG | + | chr4.1:56323001-56323020 | MS.gene63961:intron | 55.0% | |
| TTTCGGGCAAGCTCCTGCAT+CGG | - | chr4.1:56323433-56323452 | None:intergenic | 55.0% | |
| ! | AGATCCCGCTACCCCACTTT+TGG | + | chr4.1:56323196-56323215 | MS.gene63961:intron | 55.0% |
| ! | GGGGGATGGTTTCTAGGTTG+AGG | + | chr4.1:56325233-56325252 | MS.gene63961:CDS | 55.0% |
| !! | ATCCCGCTACCCCACTTTTG+GGG | + | chr4.1:56323198-56323217 | MS.gene63961:intron | 55.0% |
| !! | CAAAGTAGCGGATCAGCCTG+AGG | + | chr4.1:56322983-56323002 | MS.gene63961:intron | 55.0% |
| !! | CCGCTACTTTGGGATTTGCC+AGG | - | chr4.1:56322974-56322993 | None:intergenic | 55.0% |
| !! | GATCCCGCTACCCCACTTTT+GGG | + | chr4.1:56323197-56323216 | MS.gene63961:intron | 55.0% |
| CGACCCCAAAAGTGGGGTAG+CGG | - | chr4.1:56323204-56323223 | None:intergenic | 60.0% | |
| GACCCCAAAAGTGGGGTAGC+GGG | - | chr4.1:56323203-56323222 | None:intergenic | 60.0% | |
| GGGTGGTCGACCCCAAAAGT+GGG | - | chr4.1:56323211-56323230 | None:intergenic | 60.0% | |
| GGTGGTCGACCCCAAAAGTG+GGG | - | chr4.1:56323210-56323229 | None:intergenic | 60.0% | |
| TAGAGCAACCATGTGCGGGC+AGG | - | chr4.1:56324012-56324031 | None:intergenic | 60.0% | |
| TCGAGATCGAGGAAGGGGGA+TGG | + | chr4.1:56325219-56325238 | MS.gene63961:CDS | 60.0% | |
| !! | GTCAATCCCGGATAGCGGAG+CGG | - | chr4.1:56323233-56323252 | None:intergenic | 60.0% |
| !! | TCAATCCCGGATAGCGGAGC+GGG | - | chr4.1:56323232-56323251 | None:intergenic | 60.0% |
| ATGTGCGGGCAGGCAACTGC+AGG | - | chr4.1:56324002-56324021 | None:intergenic | 65.0% | |
| GGGGTGGTCGACCCCAAAAG+TGG | - | chr4.1:56323212-56323231 | None:intergenic | 65.0% | |
| TGCAGTTGCCTGCCCGCACA+TGG | + | chr4.1:56324001-56324020 | MS.gene63961:intron | 65.0% | |
| !! | CAATCCCGGATAGCGGAGCG+GGG | - | chr4.1:56323231-56323250 | None:intergenic | 65.0% |
| !! | TCAGCTGTCAGTGGTGGCGG+TGG | - | chr4.1:56324419-56324438 | None:intergenic | 65.0% |
| ACCACCCCGCTCCGCTATCC+GGG | + | chr4.1:56323224-56323243 | MS.gene63961:intron | 70.0% | |
| GACCACCCCGCTCCGCTATC+CGG | + | chr4.1:56323223-56323242 | MS.gene63961:intron | 70.0% | |
| !! | GCTGTCAGTGGTGGCGGTGG+TGG | - | chr4.1:56324416-56324435 | None:intergenic | 70.0% |
| !! | TCCCGGATAGCGGAGCGGGG+TGG | - | chr4.1:56323228-56323247 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 56322104 | 56325339 | 56322104 | ID=MS.gene63961 |
| chr4.1 | mRNA | 56322104 | 56325339 | 56322104 | ID=MS.gene63961.t1;Parent=MS.gene63961 |
| chr4.1 | exon | 56322104 | 56322146 | 56322104 | ID=MS.gene63961.t1.exon1;Parent=MS.gene63961.t1 |
| chr4.1 | CDS | 56322104 | 56322146 | 56322104 | ID=cds.MS.gene63961.t1;Parent=MS.gene63961.t1 |
| chr4.1 | exon | 56322225 | 56322353 | 56322225 | ID=MS.gene63961.t1.exon2;Parent=MS.gene63961.t1 |
| chr4.1 | CDS | 56322225 | 56322353 | 56322225 | ID=cds.MS.gene63961.t1;Parent=MS.gene63961.t1 |
| chr4.1 | exon | 56323439 | 56323478 | 56323439 | ID=MS.gene63961.t1.exon3;Parent=MS.gene63961.t1 |
| chr4.1 | CDS | 56323439 | 56323478 | 56323439 | ID=cds.MS.gene63961.t1;Parent=MS.gene63961.t1 |
| chr4.1 | exon | 56324176 | 56324251 | 56324176 | ID=MS.gene63961.t1.exon4;Parent=MS.gene63961.t1 |
| chr4.1 | CDS | 56324176 | 56324251 | 56324176 | ID=cds.MS.gene63961.t1;Parent=MS.gene63961.t1 |
| chr4.1 | exon | 56324350 | 56324550 | 56324350 | ID=MS.gene63961.t1.exon5;Parent=MS.gene63961.t1 |
| chr4.1 | CDS | 56324350 | 56324550 | 56324350 | ID=cds.MS.gene63961.t1;Parent=MS.gene63961.t1 |
| chr4.1 | exon | 56324708 | 56324914 | 56324708 | ID=MS.gene63961.t1.exon6;Parent=MS.gene63961.t1 |
| chr4.1 | CDS | 56324708 | 56324914 | 56324708 | ID=cds.MS.gene63961.t1;Parent=MS.gene63961.t1 |
| chr4.1 | exon | 56325001 | 56325339 | 56325001 | ID=MS.gene63961.t1.exon7;Parent=MS.gene63961.t1 |
| chr4.1 | CDS | 56325001 | 56325339 | 56325001 | ID=cds.MS.gene63961.t1;Parent=MS.gene63961.t1 |
| Gene Sequence |
| Protein sequence |
