Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34840.t1 | XP_024630626.1 | 98.3 | 237 | 4 | 0 | 1 | 237 | 1 | 237 | 1.70E-128 | 469.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34840.t1 | Q3SX41 | 42.0 | 231 | 123 | 5 | 7 | 232 | 7 | 231 | 8.4e-44 | 179.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34840.t1 | A0A072TKA2 | 98.3 | 237 | 4 | 0 | 1 | 237 | 1 | 237 | 1.2e-128 | 469.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene34840 | 0.815929 | 7.19E-52 | -1.69E-46 |
| MS.gene049159 | MS.gene34840 | 0.810962 | 8.88E-51 | -1.69E-46 |
| MS.gene049254 | MS.gene34840 | 0.851053 | 1.14E-60 | -1.69E-46 |
| MS.gene049404 | MS.gene34840 | 0.803881 | 2.82E-49 | -1.69E-46 |
| MS.gene049435 | MS.gene34840 | 0.800682 | 1.29E-48 | -1.69E-46 |
| MS.gene049711 | MS.gene34840 | 0.811477 | 6.87E-51 | -1.69E-46 |
| MS.gene049983 | MS.gene34840 | 0.821768 | 3.39E-53 | -1.69E-46 |
| MS.gene050026 | MS.gene34840 | 0.81543 | 9.28E-52 | -1.69E-46 |
| MS.gene050561 | MS.gene34840 | 0.802268 | 6.08E-49 | -1.69E-46 |
| MS.gene050759 | MS.gene34840 | 0.809603 | 1.74E-50 | -1.69E-46 |
| MS.gene051198 | MS.gene34840 | 0.824628 | 7.28E-54 | -1.69E-46 |
| MS.gene051210 | MS.gene34840 | 0.803604 | 3.22E-49 | -1.69E-46 |
| MS.gene051279 | MS.gene34840 | 0.833996 | 3.87E-56 | -1.69E-46 |
| MS.gene051332 | MS.gene34840 | 0.808763 | 2.64E-50 | -1.69E-46 |
| MS.gene051368 | MS.gene34840 | 0.807645 | 4.57E-50 | -1.69E-46 |
| MS.gene051744 | MS.gene34840 | 0.831196 | 1.91E-55 | -1.69E-46 |
| MS.gene051800 | MS.gene34840 | 0.829133 | 6.10E-55 | -1.69E-46 |
| MS.gene052037 | MS.gene34840 | 0.813132 | 2.99E-51 | -1.69E-46 |
| MS.gene052463 | MS.gene34840 | 0.843951 | 1.02E-58 | -1.69E-46 |
| MS.gene052516 | MS.gene34840 | 0.838387 | 2.96E-57 | -1.69E-46 |
| MS.gene052519 | MS.gene34840 | 0.816427 | 5.56E-52 | -1.69E-46 |
| MS.gene052534 | MS.gene34840 | 0.809123 | 2.21E-50 | -1.69E-46 |
| MS.gene052582 | MS.gene34840 | 0.825967 | 3.51E-54 | -1.69E-46 |
| MS.gene052584 | MS.gene34840 | 0.829873 | 4.03E-55 | -1.69E-46 |
| MS.gene052586 | MS.gene34840 | 0.826725 | 2.32E-54 | -1.69E-46 |
| MS.gene052773 | MS.gene34840 | 0.810071 | 1.38E-50 | -1.69E-46 |
| MS.gene053079 | MS.gene34840 | 0.819503 | 1.12E-52 | -1.69E-46 |
| MS.gene05308 | MS.gene34840 | 0.808469 | 3.05E-50 | -1.69E-46 |
| MS.gene053226 | MS.gene34840 | 0.831446 | 1.66E-55 | -1.69E-46 |
| MS.gene05414 | MS.gene34840 | 0.811666 | 6.25E-51 | -1.69E-46 |
| MS.gene05415 | MS.gene34840 | 0.808811 | 2.58E-50 | -1.69E-46 |
| MS.gene054236 | MS.gene34840 | 0.81377 | 2.16E-51 | -1.69E-46 |
| MS.gene05423 | MS.gene34840 | 0.809402 | 1.93E-50 | -1.69E-46 |
| MS.gene054291 | MS.gene34840 | -0.805874 | 1.08E-49 | -1.69E-46 |
| MS.gene054467 | MS.gene34840 | 0.801616 | 8.28E-49 | -1.69E-46 |
| MS.gene054468 | MS.gene34840 | 0.815557 | 8.70E-52 | -1.69E-46 |
| MS.gene054479 | MS.gene34840 | 0.818157 | 2.27E-52 | -1.69E-46 |
| MS.gene054576 | MS.gene34840 | 0.820105 | 8.17E-53 | -1.69E-46 |
| MS.gene05458 | MS.gene34840 | 0.803905 | 2.79E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene34840 | 0.841285 | 5.21E-58 | -1.69E-46 |
| MS.gene054775 | MS.gene34840 | 0.824854 | 6.44E-54 | -1.69E-46 |
| MS.gene054991 | MS.gene34840 | 0.803693 | 3.09E-49 | -1.69E-46 |
| MS.gene055227 | MS.gene34840 | 0.800669 | 1.29E-48 | -1.69E-46 |
| MS.gene055513 | MS.gene34840 | 0.806272 | 8.92E-50 | -1.69E-46 |
| MS.gene055586 | MS.gene34840 | 0.814841 | 1.25E-51 | -1.69E-46 |
| MS.gene055623 | MS.gene34840 | 0.802003 | 6.90E-49 | -1.69E-46 |
| MS.gene055778 | MS.gene34840 | 0.80841 | 3.14E-50 | -1.69E-46 |
| MS.gene055818 | MS.gene34840 | 0.820098 | 8.21E-53 | -1.69E-46 |
| MS.gene055864 | MS.gene34840 | 0.80723 | 5.59E-50 | -1.69E-46 |
| MS.gene055926 | MS.gene34840 | 0.840049 | 1.10E-57 | -1.69E-46 |
| MS.gene05604 | MS.gene34840 | 0.828927 | 6.85E-55 | -1.69E-46 |
| MS.gene056050 | MS.gene34840 | 0.800639 | 1.31E-48 | -1.69E-46 |
| MS.gene056162 | MS.gene34840 | 0.810533 | 1.10E-50 | -1.69E-46 |
| MS.gene056174 | MS.gene34840 | 0.841065 | 5.95E-58 | -1.69E-46 |
| MS.gene056308 | MS.gene34840 | 0.815369 | 9.58E-52 | -1.69E-46 |
| MS.gene056776 | MS.gene34840 | 0.824265 | 8.86E-54 | -1.69E-46 |
| MS.gene05686 | MS.gene34840 | 0.841405 | 4.85E-58 | -1.69E-46 |
| MS.gene05690 | MS.gene34840 | 0.829503 | 4.96E-55 | -1.69E-46 |
| MS.gene056973 | MS.gene34840 | 0.801401 | 9.16E-49 | -1.69E-46 |
| MS.gene057026 | MS.gene34840 | 0.812847 | 3.45E-51 | -1.69E-46 |
| MS.gene057034 | MS.gene34840 | 0.810888 | 9.22E-51 | -1.69E-46 |
| MS.gene057208 | MS.gene34840 | 0.820271 | 7.49E-53 | -1.69E-46 |
| MS.gene057314 | MS.gene34840 | 0.813807 | 2.12E-51 | -1.69E-46 |
| MS.gene057598 | MS.gene34840 | 0.800862 | 1.18E-48 | -1.69E-46 |
| MS.gene057915 | MS.gene34840 | 0.841987 | 3.40E-58 | -1.69E-46 |
| MS.gene058010 | MS.gene34840 | 0.82581 | 3.83E-54 | -1.69E-46 |
| MS.gene058037 | MS.gene34840 | 0.801418 | 9.09E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene34840 | 0.818247 | 2.17E-52 | -1.69E-46 |
| MS.gene058979 | MS.gene34840 | 0.82002 | 8.55E-53 | -1.69E-46 |
| MS.gene05897 | MS.gene34840 | 0.813885 | 2.04E-51 | -1.69E-46 |
| MS.gene059272 | MS.gene34840 | 0.804276 | 2.33E-49 | -1.69E-46 |
| MS.gene059439 | MS.gene34840 | 0.814942 | 1.19E-51 | -1.69E-46 |
| MS.gene059625 | MS.gene34840 | 0.817998 | 2.47E-52 | -1.69E-46 |
| MS.gene059725 | MS.gene34840 | 0.810296 | 1.24E-50 | -1.69E-46 |
| MS.gene059842 | MS.gene34840 | 0.81562 | 8.42E-52 | -1.69E-46 |
| MS.gene060011 | MS.gene34840 | 0.817292 | 3.56E-52 | -1.69E-46 |
| MS.gene060167 | MS.gene34840 | 0.821134 | 4.74E-53 | -1.69E-46 |
| MS.gene060322 | MS.gene34840 | 0.817006 | 4.12E-52 | -1.69E-46 |
| MS.gene060365 | MS.gene34840 | 0.811681 | 6.20E-51 | -1.69E-46 |
| MS.gene060373 | MS.gene34840 | 0.816078 | 6.66E-52 | -1.69E-46 |
| MS.gene06052 | MS.gene34840 | 0.846438 | 2.17E-59 | -1.69E-46 |
| MS.gene060932 | MS.gene34840 | 0.819569 | 1.08E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene34840 | MS.gene07484 | PPI |
| MS.gene062186 | MS.gene34840 | PPI |
| MS.gene34840 | MS.gene004956 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34840.t1 | MTR_0004s0480 | 97.965 | 344 | 7 | 0 | 1 | 344 | 1 | 344 | 0.0 | 687 |
| MS.gene34840.t1 | MTR_7g080320 | 39.130 | 115 | 56 | 4 | 1 | 111 | 1 | 105 | 3.20e-15 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34840.t1 | AT5G51410 | 78.889 | 270 | 56 | 1 | 1 | 269 | 1 | 270 | 3.57e-153 | 434 |
| MS.gene34840.t1 | AT5G51410 | 78.889 | 270 | 56 | 1 | 1 | 269 | 1 | 270 | 3.57e-153 | 434 |
| MS.gene34840.t1 | AT5G51410 | 78.889 | 270 | 56 | 1 | 1 | 269 | 1 | 270 | 3.57e-153 | 434 |
| MS.gene34840.t1 | AT5G51410 | 78.889 | 270 | 56 | 1 | 1 | 269 | 1 | 270 | 3.57e-153 | 434 |
| MS.gene34840.t1 | AT5G51410 | 78.889 | 270 | 56 | 1 | 1 | 269 | 1 | 270 | 3.57e-153 | 434 |
| MS.gene34840.t1 | AT5G17440 | 30.526 | 190 | 113 | 6 | 1 | 185 | 1 | 176 | 1.84e-16 | 80.1 |
| MS.gene34840.t1 | AT5G17440 | 33.846 | 130 | 71 | 3 | 117 | 241 | 199 | 318 | 2.41e-13 | 70.9 |
| MS.gene34840.t1 | AT3G03340 | 30.526 | 190 | 115 | 5 | 1 | 186 | 1 | 177 | 1.89e-16 | 80.1 |
| MS.gene34840.t1 | AT3G03340 | 35.220 | 159 | 78 | 7 | 116 | 263 | 198 | 342 | 1.26e-14 | 74.7 |
| MS.gene34840.t1 | AT3G03340 | 30.526 | 190 | 115 | 5 | 1 | 186 | 79 | 255 | 4.16e-16 | 79.7 |
| MS.gene34840.t1 | AT3G03340 | 35.220 | 159 | 78 | 7 | 116 | 263 | 276 | 420 | 2.13e-14 | 74.3 |
| MS.gene34840.t1 | AT5G17440 | 30.526 | 190 | 113 | 6 | 1 | 185 | 1 | 176 | 4.56e-16 | 77.8 |
| MS.gene34840.t1 | AT3G03340 | 30.526 | 190 | 115 | 5 | 1 | 186 | 1 | 177 | 1.82e-15 | 76.6 |
| MS.gene34840.t1 | AT3G03340 | 35.537 | 121 | 61 | 4 | 116 | 230 | 198 | 307 | 6.32e-13 | 69.3 |
Find 77 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCTGTAGTTATGCTTAAT+AGG | 0.142913 | 4.4:-60911103 | None:intergenic |
| GCAAGATCGGCTTCAAATTT+AGG | 0.292888 | 4.4:-60909996 | None:intergenic |
| TTCTGTAGTTATGCTTAATA+GGG | 0.331026 | 4.4:-60911102 | None:intergenic |
| GGAAGTTTGTGGTTTCTATA+TGG | 0.332001 | 4.4:+60908170 | MS.gene34840:CDS |
| GGAGAAAATAAAGAACCTTC+TGG | 0.354149 | 4.4:+60910252 | MS.gene34840:CDS |
| GGTAATCGAGATCGGGGAAG+GGG | 0.374892 | 4.4:+60911007 | MS.gene34840:CDS |
| GTTGAATCTCTTGGTGAAGC+TGG | 0.375956 | 4.4:+60910280 | MS.gene34840:CDS |
| GCACGTATGCATCATGCCTT+GGG | 0.388877 | 4.4:-60909974 | None:intergenic |
| GACGGAGTGTTTCAAGTGAT+AGG | 0.398540 | 4.4:+60910891 | MS.gene34840:CDS |
| TGGGATGATAAGGAAGTTTG+TGG | 0.414376 | 4.4:+60908159 | MS.gene34840:CDS |
| AGAAGTGAGTTGGGATGATA+AGG | 0.417287 | 4.4:+60908149 | MS.gene34840:CDS |
| TTGTGTTAAGACTGCCTTCT+CGG | 0.418271 | 4.4:-60910517 | None:intergenic |
| CTCGACGAACTCATGGGTTC+AGG | 0.418323 | 4.4:+60908016 | MS.gene34840:CDS |
| CTGGAACAAGTTGAATCTCT+TGG | 0.435647 | 4.4:+60910271 | MS.gene34840:CDS |
| GGCACGTATGCATCATGCCT+TGG | 0.438040 | 4.4:-60909975 | None:intergenic |
| ATTTGAACAGTTGTCTGTCC+TGG | 0.440185 | 4.4:+60910228 | MS.gene34840:CDS |
| AGCTCTCCTCGACGAACTCA+TGG | 0.445844 | 4.4:+60908009 | MS.gene34840:CDS |
| CTCACAAAACTGAGCAAGAT+CGG | 0.453847 | 4.4:-60910009 | None:intergenic |
| GGGGTTACAAAGAAGTGAGT+TGG | 0.470550 | 4.4:+60908139 | MS.gene34840:CDS |
| GGGTTACAAAGAAGTGAGTT+GGG | 0.471963 | 4.4:+60908140 | MS.gene34840:CDS |
| AGGTAGAGGTAATCGAGATC+GGG | 0.483464 | 4.4:+60911000 | MS.gene34840:CDS |
| ACTCGGATCGTGAAAGATCT+CGG | 0.487797 | 4.4:+60910969 | MS.gene34840:CDS |
| GCAGAGACAGGTACCACAAT+CGG | 0.490454 | 4.4:+60911065 | MS.gene34840:CDS |
| ACACTCCGTCTCTTTCTCTC+AGG | 0.491217 | 4.4:-60910878 | None:intergenic |
| ATAATCACAGGTGATGGACT+TGG | 0.491646 | 4.4:+60910126 | MS.gene34840:intron |
| AGAAGAGCGAAGAAAACAAA+AGG | 0.502735 | 4.4:+60910847 | MS.gene34840:CDS |
| GCTGTCAGTGGTGGCGGTGG+TGG | 0.503620 | 4.4:-60910199 | None:intergenic |
| GTCAACACGCGCAGTGATCT+CGG | 0.505201 | 4.4:+60908219 | MS.gene34840:CDS |
| GAGGTAATCGAGATCGGGGA+AGG | 0.512789 | 4.4:+60911005 | MS.gene34840:CDS |
| GCGAAGAAAACAAAAGGAGC+AGG | 0.514193 | 4.4:+60910853 | MS.gene34840:CDS |
| ACGGAGTGTTTCAAGTGATA+GGG | 0.514199 | 4.4:+60910892 | MS.gene34840:CDS |
| CTCGGATCGTGAAAGATCTC+GGG | 0.514400 | 4.4:+60910970 | MS.gene34840:CDS |
| ATCGAGATAGGCAGCGTGAT+AGG | 0.514417 | 4.4:+60910933 | MS.gene34840:CDS |
| ATCTCTTGGTGAAGCTGGGA+AGG | 0.515528 | 4.4:+60910285 | MS.gene34840:CDS |
| TTGAATCTCTTGGTGAAGCT+GGG | 0.520092 | 4.4:+60910281 | MS.gene34840:CDS |
| GGAAAGCAGCATGTTGGCTA+TGG | 0.524490 | 4.4:+60910654 | MS.gene34840:CDS |
| AAGGTAGAGGTAATCGAGAT+CGG | 0.530372 | 4.4:+60910999 | MS.gene34840:CDS |
| GAGATTCAACTTGTTCCAGA+AGG | 0.534767 | 4.4:-60910267 | None:intergenic |
| AGCTGAAGCTCTTATGAGAA+AGG | 0.541211 | 4.4:+60910315 | MS.gene34840:CDS |
| CTTGACTGAGGAAGAAAGAA+GGG | 0.550258 | 4.4:+60908119 | MS.gene34840:CDS |
| ACTTGACTGAGGAAGAAAGA+AGG | 0.553452 | 4.4:+60908118 | MS.gene34840:CDS |
| GATTGCTAAGGAGAAGGCTA+AGG | 0.554953 | 4.4:+60910793 | MS.gene34840:intron |
| TCAGCTGTCAGTGGTGGCGG+TGG | 0.557872 | 4.4:-60910202 | None:intergenic |
| GGAAGAAGAAAGATTGACTC+GGG | 0.558620 | 4.4:+60910814 | MS.gene34840:CDS |
| GTAATCGAGATCGGGGAAGG+GGG | 0.559279 | 4.4:+60911008 | MS.gene34840:CDS |
| AGAACTCAGTCTCATGTCGC+AGG | 0.559633 | 4.4:+60910633 | MS.gene34840:CDS |
| GAAAGATCTCGGGAATATGA+AGG | 0.563627 | 4.4:+60910980 | MS.gene34840:CDS |
| AGGTAATCGAGATCGGGGAA+GGG | 0.563842 | 4.4:+60911006 | MS.gene34840:CDS |
| GCAGCATGTTGGCTATGGTA+TGG | 0.570060 | 4.4:+60910659 | MS.gene34840:CDS |
| TCTCGGGAATATGAAGGTAG+AGG | 0.580782 | 4.4:+60910986 | MS.gene34840:CDS |
| CTATTAAGCATAACTACAGA+AGG | 0.587485 | 4.4:+60911104 | MS.gene34840:CDS |
| GGTATGTGGTTCGTTTCTTG+TGG | 0.588655 | 4.4:+60910593 | MS.gene34840:CDS |
| GCTCTCCTCGACGAACTCAT+GGG | 0.594522 | 4.4:+60908010 | MS.gene34840:CDS |
| AACGTGATCTGCTCCGATTG+TGG | 0.597216 | 4.4:-60911078 | None:intergenic |
| TGACTTCATAAATGAATACA+AGG | 0.598021 | 4.4:+60910686 | MS.gene34840:CDS |
| AGGAAGAAGAAAGATTGACT+CGG | 0.603218 | 4.4:+60910813 | MS.gene34840:CDS |
| GTCGCAGGAAAGCAGCATGT+TGG | 0.607800 | 4.4:+60910648 | MS.gene34840:CDS |
| AATGCTTCAGGAGAAGAAGA+TGG | 0.611727 | 4.4:+60910560 | MS.gene34840:CDS |
| ATCGTGATAAAGATCGAGAT+AGG | 0.617765 | 4.4:+60910921 | MS.gene34840:CDS |
| TCTGTAGTTATGCTTAATAG+GGG | 0.619225 | 4.4:-60911101 | None:intergenic |
| ATGGCACTCTGTGAGGTATG+TGG | 0.625178 | 4.4:+60910579 | MS.gene34840:CDS |
| TGAACAGTTGTCTGTCCTGG+AGG | 0.630932 | 4.4:+60910231 | MS.gene34840:CDS |
| AGGATCCTGAGAGAAAGAGA+CGG | 0.640354 | 4.4:+60910873 | MS.gene34840:CDS |
| GTGTTGACGAAGAGATCGTG+AGG | 0.645071 | 4.4:-60908204 | None:intergenic |
| ACGAGAACGTCTTAATCAAG+AGG | 0.649224 | 4.4:+60910168 | MS.gene34840:CDS |
| ATGGTTTCTAGGTTGAGGAA+CGG | 0.651338 | 4.4:+60911031 | MS.gene34840:CDS |
| GGTAGAGGTAATCGAGATCG+GGG | 0.658261 | 4.4:+60911001 | MS.gene34840:CDS |
| GAAGAAGATGGCACTCTGTG+AGG | 0.661944 | 4.4:+60910572 | MS.gene34840:CDS |
| AGAACGTCTTAATCAAGAGG+TGG | 0.666877 | 4.4:+60910171 | MS.gene34840:CDS |
| GGAGACACTTAATACCGAGA+AGG | 0.669990 | 4.4:+60910503 | MS.gene34840:CDS |
| TTCAGCTCGAAACTTGACTG+AGG | 0.672653 | 4.4:+60908107 | MS.gene34840:intron |
| TTGACTGAGGAAGAAAGAAG+GGG | 0.676867 | 4.4:+60908120 | MS.gene34840:CDS |
| CACGTATGCATCATGCCTTG+GGG | 0.690040 | 4.4:-60909973 | None:intergenic |
| TAGGTACAGAGATAGAGACT+CGG | 0.703615 | 4.4:+60910952 | MS.gene34840:CDS |
| TGTTGACGAAGAGATCGTGA+GGG | 0.727468 | 4.4:-60908203 | None:intergenic |
| CTGAACCCATGAGTTCGTCG+AGG | 0.733418 | 4.4:-60908015 | None:intergenic |
| TTGGATAGAAGAGTAAAACG+TGG | 0.775215 | 4.4:+60910145 | MS.gene34840:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTTTATATTAAATATA+TGG | + | chr4.4:60908976-60908995 | MS.gene34840:intron | 0.0% |
| !! | ATAAATGTATAGATTAATTA+AGG | - | chr4.4:60910722-60910741 | None:intergenic | 10.0% |
| !! | AAAGGTTAACAAAAAAAATT+AGG | - | chr4.4:60909563-60909582 | None:intergenic | 15.0% |
| !! | AAGGTTAACAAAAAAAATTA+GGG | - | chr4.4:60909562-60909581 | None:intergenic | 15.0% |
| !! | ATTGACATTCAAATTTAATA+TGG | - | chr4.4:60909600-60909619 | None:intergenic | 15.0% |
| !! | GTTCAAAAAATTATTAATCT+TGG | + | chr4.4:60909031-60909050 | MS.gene34840:intron | 15.0% |
| !! | TTGACATTCAAATTTAATAT+GGG | - | chr4.4:60909599-60909618 | None:intergenic | 15.0% |
| !!! | TACTATTTATAAGTTTGTTA+AGG | + | chr4.4:60908421-60908440 | MS.gene34840:intron | 15.0% |
| !! | AAAAAATTAGGGTATACTTA+CGG | - | chr4.4:60909551-60909570 | None:intergenic | 20.0% |
| !! | GAAATCAAAAAACAATTTAC+TGG | - | chr4.4:60909884-60909903 | None:intergenic | 20.0% |
| !! | TTTCAAATTATTAGATGTGA+CGG | - | chr4.4:60908523-60908542 | None:intergenic | 20.0% |
| !!! | AAAGGATAAGAAACTTTTAA+AGG | - | chr4.4:60909698-60909717 | None:intergenic | 20.0% |
| !!! | AAGGATAAGAAACTTTTAAA+GGG | - | chr4.4:60909697-60909716 | None:intergenic | 20.0% |
| !!! | ATATTTTACTTTGTCATGTA+TGG | + | chr4.4:60909720-60909739 | MS.gene34840:intron | 20.0% |
| !!! | ATTAAATAGTTTGAGATTTC+TGG | + | chr4.4:60909355-60909374 | MS.gene34840:intron | 20.0% |
| !!! | ATTAACACTTTTTCATTTTG+AGG | - | chr4.4:60910543-60910562 | None:intergenic | 20.0% |
| !!! | GCATTTTATGCTTTATTTAT+CGG | - | chr4.4:60909862-60909881 | None:intergenic | 20.0% |
| ! | AACATATGCCTATGATAATT+TGG | + | chr4.4:60909751-60909770 | MS.gene34840:intron | 25.0% |
| ! | AACTTATGAACTATGAAACA+CGG | + | chr4.4:60908462-60908481 | MS.gene34840:intron | 25.0% |
| ! | AATAGTATACACAAGGAAAA+GGG | - | chr4.4:60910360-60910379 | None:intergenic | 25.0% |
| ! | AATCATCAATAGTATACACA+AGG | - | chr4.4:60910367-60910386 | None:intergenic | 25.0% |
| ! | TATTACTTCCTATTCCAAAT+AGG | - | chr4.4:60908923-60908942 | None:intergenic | 25.0% |
| ! | TGACAAAGTAAAATATGCAA+AGG | - | chr4.4:60909716-60909735 | None:intergenic | 25.0% |
| ! | TGACTTCATAAATGAATACA+AGG | + | chr4.4:60910686-60910705 | MS.gene34840:CDS | 25.0% |
| ! | TTCTGTAGTTATGCTTAATA+GGG | - | chr4.4:60911105-60911124 | None:intergenic | 25.0% |
| !! | TTTTTAATGTAGAATGAGGA+TGG | - | chr4.4:60910060-60910079 | None:intergenic | 25.0% |
| !!! | AATTTCATGACTTGTTCAAT+TGG | + | chr4.4:60909617-60909636 | MS.gene34840:intron | 25.0% |
| !!! | ACTGTTTTTAATGTAGAATG+AGG | - | chr4.4:60910064-60910083 | None:intergenic | 25.0% |
| !!! | ATTTCATGACTTGTTCAATT+GGG | + | chr4.4:60909618-60909637 | MS.gene34840:intron | 25.0% |
| !!! | CTCTTGAATTTATTTTTTCG+CGG | + | chr4.4:60910462-60910481 | MS.gene34840:intron | 25.0% |
| !!! | TCTTGAATTTATTTTTTCGC+GGG | + | chr4.4:60910463-60910482 | MS.gene34840:intron | 25.0% |
| !!! | TGCAATGTTTTTGAAAATCA+CGG | - | chr4.4:60908751-60908770 | None:intergenic | 25.0% |
| !!! | TTTGACTTTTTGTTCCTATT+TGG | + | chr4.4:60908906-60908925 | MS.gene34840:intron | 25.0% |
| !!! | TTTTTGTTCCTATTTGGAAT+AGG | + | chr4.4:60908912-60908931 | MS.gene34840:intron | 25.0% |
| AAACTCAGTTACACATTTAC+GGG | - | chr4.4:60909906-60909925 | None:intergenic | 30.0% | |
| AAGTTCATTCTGTTTCATGT+AGG | - | chr4.4:60909148-60909167 | None:intergenic | 30.0% | |
| ACAAGTTCATTTCTACGATT+GGG | - | chr4.4:60910407-60910426 | None:intergenic | 30.0% | |
| AGGAACAAAAAGTCAAAGAT+TGG | - | chr4.4:60908903-60908922 | None:intergenic | 30.0% | |
| CAAAAATAAGCCAATCCAAA+CGG | - | chr4.4:60908359-60908378 | None:intergenic | 30.0% | |
| CAATAGTATACACAAGGAAA+AGG | - | chr4.4:60910361-60910380 | None:intergenic | 30.0% | |
| CTATTAAGCATAACTACAGA+AGG | + | chr4.4:60911104-60911123 | MS.gene34840:CDS | 30.0% | |
| CTTATTAACTGTGATAGCTT+TGG | + | chr4.4:60909208-60909227 | MS.gene34840:intron | 30.0% | |
| CTTCTGTAGTTATGCTTAAT+AGG | - | chr4.4:60911106-60911125 | None:intergenic | 30.0% | |
| GAAACTCAGTTACACATTTA+CGG | - | chr4.4:60909907-60909926 | None:intergenic | 30.0% | |
| TAATACAGTAATTGACACCT+AGG | - | chr4.4:60909117-60909136 | None:intergenic | 30.0% | |
| TACGCATACCAAATTATCAT+AGG | - | chr4.4:60909762-60909781 | None:intergenic | 30.0% | |
| TATTCATAAGCTATGAAGCA+CGG | - | chr4.4:60908620-60908639 | None:intergenic | 30.0% | |
| TCTGTAGTTATGCTTAATAG+GGG | - | chr4.4:60911104-60911123 | None:intergenic | 30.0% | |
| TGAATTGACACAAAATTCCA+AGG | - | chr4.4:60908794-60908813 | None:intergenic | 30.0% | |
| TGATGTTACAAATGAGTATG+AGG | + | chr4.4:60908320-60908339 | MS.gene34840:intron | 30.0% | |
| TTCATAAGCTCAATCTAAAC+AGG | + | chr4.4:60908704-60908723 | MS.gene34840:intron | 30.0% | |
| ! | CTTTATTTATCGGCATATCA+TGG | - | chr4.4:60909852-60909871 | None:intergenic | 30.0% |
| ! | TTCTTCTTTTCAGATTGCTA+AGG | + | chr4.4:60910781-60910800 | MS.gene34840:intron | 30.0% |
| !! | CTTACTTTTCTTTCAACTTC+GGG | - | chr4.4:60909300-60909319 | None:intergenic | 30.0% |
| !! | CTTTTAAAGGGAAGCAATAT+TGG | - | chr4.4:60909685-60909704 | None:intergenic | 30.0% |
| !! | GCAATGTTTTTGAAAATCAC+GGG | - | chr4.4:60908750-60908769 | None:intergenic | 30.0% |
| !! | GCTTACTTTTCTTTCAACTT+CGG | - | chr4.4:60909301-60909320 | None:intergenic | 30.0% |
| !! | TAAGATCTTTAGAGTTGAAG+AGG | - | chr4.4:60909192-60909211 | None:intergenic | 30.0% |
| !! | TGAAAAAGTGTTAATGCTTC+AGG | + | chr4.4:60910548-60910567 | MS.gene34840:CDS | 30.0% |
| !! | TGTTTTCTGGTAATAATCAC+AGG | + | chr4.4:60910114-60910133 | MS.gene34840:intron | 30.0% |
| !! | TTAGTTTTCTGACAGTAATC+AGG | - | chr4.4:60909423-60909442 | None:intergenic | 30.0% |
| !! | TTTCATGACTTGTTCAATTG+GGG | + | chr4.4:60909619-60909638 | MS.gene34840:intron | 30.0% |
| AAAGGGAAGCAATATTGGTA+CGG | - | chr4.4:60909680-60909699 | None:intergenic | 35.0% | |
| AGAAGAGCGAAGAAAACAAA+AGG | + | chr4.4:60910847-60910866 | MS.gene34840:CDS | 35.0% | |
| AGGAAGAAGAAAGATTGACT+CGG | + | chr4.4:60910813-60910832 | MS.gene34840:CDS | 35.0% | |
| ATCGTGATAAAGATCGAGAT+AGG | + | chr4.4:60910921-60910940 | MS.gene34840:CDS | 35.0% | |
| ATTCAAGAGAATCTCAGTCA+CGG | - | chr4.4:60910451-60910470 | None:intergenic | 35.0% | |
| CAAGTTCATTTCTACGATTG+GGG | - | chr4.4:60910406-60910425 | None:intergenic | 35.0% | |
| CACAAGTTCATTTCTACGAT+TGG | - | chr4.4:60910408-60910427 | None:intergenic | 35.0% | |
| GGAAGTTTGTGGTTTCTATA+TGG | + | chr4.4:60908170-60908189 | MS.gene34840:CDS | 35.0% | |
| GGAGAAAATAAAGAACCTTC+TGG | + | chr4.4:60910252-60910271 | MS.gene34840:CDS | 35.0% | |
| GTTACAAATGAGTATGAGGA+AGG | + | chr4.4:60908324-60908343 | MS.gene34840:intron | 35.0% | |
| TGAACTATGAAACACGGATA+CGG | + | chr4.4:60908468-60908487 | MS.gene34840:intron | 35.0% | |
| TTGGATAGAAGAGTAAAACG+TGG | + | chr4.4:60910145-60910164 | MS.gene34840:CDS | 35.0% | |
| ! | AACTTCGGGTCATGTATTTT+CGG | - | chr4.4:60909286-60909305 | None:intergenic | 35.0% |
| ! | CTGATGTTCTTCATGTTTTC+TGG | + | chr4.4:60910101-60910120 | MS.gene34840:intron | 35.0% |
| ! | TTTTCAGATTGCTAAGGAGA+AGG | + | chr4.4:60910787-60910806 | MS.gene34840:intron | 35.0% |
| !! | CAGTTTTGTGAGAAATTGGT+AGG | + | chr4.4:60910020-60910039 | MS.gene34840:intron | 35.0% |
| !! | TCAAATTTTTCAGCTGTCAG+TGG | - | chr4.4:60910214-60910233 | None:intergenic | 35.0% |
| !! | TGCTCAGTTTTGTGAGAAAT+TGG | + | chr4.4:60910016-60910035 | MS.gene34840:CDS | 35.0% |
| !! | TTAACTGTGATAGCTTTGGT+TGG | + | chr4.4:60909212-60909231 | MS.gene34840:intron | 35.0% |
| AAGGTAGAGGTAATCGAGAT+CGG | + | chr4.4:60910999-60911018 | MS.gene34840:CDS | 40.0% | |
| AATGCTTCAGGAGAAGAAGA+TGG | + | chr4.4:60910560-60910579 | MS.gene34840:CDS | 40.0% | |
| ACGAGAACGTCTTAATCAAG+AGG | + | chr4.4:60910168-60910187 | MS.gene34840:CDS | 40.0% | |
| ACTTGACTGAGGAAGAAAGA+AGG | + | chr4.4:60908118-60908137 | MS.gene34840:CDS | 40.0% | |
| AGAACGTCTTAATCAAGAGG+TGG | + | chr4.4:60910171-60910190 | MS.gene34840:CDS | 40.0% | |
| AGCTGAAGCTCTTATGAGAA+AGG | + | chr4.4:60910315-60910334 | MS.gene34840:CDS | 40.0% | |
| AGGTTGAGGAACGGAAAAAA+TGG | + | chr4.4:60911040-60911059 | MS.gene34840:CDS | 40.0% | |
| ATGAGTATGAGGAAGGACTT+TGG | + | chr4.4:60908331-60908350 | MS.gene34840:intron | 40.0% | |
| ATTTGAACAGTTGTCTGTCC+TGG | + | chr4.4:60910228-60910247 | MS.gene34840:CDS | 40.0% | |
| CTCACAAAACTGAGCAAGAT+CGG | - | chr4.4:60910012-60910031 | None:intergenic | 40.0% | |
| CTGGTAATAATCACAGGTGA+TGG | + | chr4.4:60910120-60910139 | MS.gene34840:intron | 40.0% | |
| CTTGACTGAGGAAGAAAGAA+GGG | + | chr4.4:60908119-60908138 | MS.gene34840:CDS | 40.0% | |
| GAAAAAATGGAAGCAGAGAC+AGG | + | chr4.4:60911053-60911072 | MS.gene34840:CDS | 40.0% | |
| GAAAGATCTCGGGAATATGA+AGG | + | chr4.4:60910980-60910999 | MS.gene34840:CDS | 40.0% | |
| GAACATCAGCATACAAGCAA+AGG | - | chr4.4:60910090-60910109 | None:intergenic | 40.0% | |
| GGGTTACAAAGAAGTGAGTT+GGG | + | chr4.4:60908140-60908159 | MS.gene34840:CDS | 40.0% | |
| GTAGTGTGATATTGCATCCT+TGG | + | chr4.4:60908774-60908793 | MS.gene34840:intron | 40.0% | |
| GTTAAGCTATCTTAGTGCTG+TGG | + | chr4.4:60909511-60909530 | MS.gene34840:intron | 40.0% | |
| TAACGTGTTTAAACCGATGC+AGG | + | chr4.4:60909253-60909272 | MS.gene34840:intron | 40.0% | |
| TAGGTACAGAGATAGAGACT+CGG | + | chr4.4:60910952-60910971 | MS.gene34840:CDS | 40.0% | |
| TATACACAAGGAAAAGGGTG+TGG | - | chr4.4:60910355-60910374 | None:intergenic | 40.0% | |
| TGAGTATGAGGAAGGACTTT+GGG | + | chr4.4:60908332-60908351 | MS.gene34840:intron | 40.0% | |
| TGGGATGATAAGGAAGTTTG+TGG | + | chr4.4:60908159-60908178 | MS.gene34840:CDS | 40.0% | |
| TTGAATCTCTTGGTGAAGCT+GGG | + | chr4.4:60910281-60910300 | MS.gene34840:CDS | 40.0% | |
| TTGACTGAGGAAGAAAGAAG+GGG | + | chr4.4:60908120-60908139 | MS.gene34840:CDS | 40.0% | |
| TTGTGTTAAGACTGCCTTCT+CGG | - | chr4.4:60910520-60910539 | None:intergenic | 40.0% | |
| ! | ACGGAGTGTTTCAAGTGATA+GGG | + | chr4.4:60910892-60910911 | MS.gene34840:CDS | 40.0% |
| ! | ACTTCGGGTCATGTATTTTC+GGG | - | chr4.4:60909285-60909304 | None:intergenic | 40.0% |
| ! | AGAAGTGAGTTGGGATGATA+AGG | + | chr4.4:60908149-60908168 | MS.gene34840:CDS | 40.0% |
| ! | ATGGTTTCTAGGTTGAGGAA+CGG | + | chr4.4:60911031-60911050 | MS.gene34840:CDS | 40.0% |
| ! | CGGGATATTTTTCTTTCAGG+TGG | + | chr4.4:60910482-60910501 | MS.gene34840:intron | 40.0% |
| ! | CTGGAACAAGTTGAATCTCT+TGG | + | chr4.4:60910271-60910290 | MS.gene34840:CDS | 40.0% |
| ! | GAGATTCAACTTGTTCCAGA+AGG | - | chr4.4:60910270-60910289 | None:intergenic | 40.0% |
| ! | GCAAGATCGGCTTCAAATTT+AGG | - | chr4.4:60909999-60910018 | None:intergenic | 40.0% |
| ! | GGAAGAAGAAAGATTGACTC+GGG | + | chr4.4:60910814-60910833 | MS.gene34840:CDS | 40.0% |
| ! | GTGTTGCTCTTCTATCTATG+TGG | + | chr4.4:60909489-60909508 | MS.gene34840:intron | 40.0% |
| ! | TACAAGTGTAAGTGTCGTGT+CGG | + | chr4.4:60908566-60908585 | MS.gene34840:intron | 40.0% |
| ! | TCGCGGGATATTTTTCTTTC+AGG | + | chr4.4:60910479-60910498 | MS.gene34840:intron | 40.0% |
| !! | AAGATTGACTCGGGAAAAAG+AGG | + | chr4.4:60910823-60910842 | MS.gene34840:CDS | 40.0% |
| !! | AATTTTTCAGCTGTCAGTGG+TGG | - | chr4.4:60910211-60910230 | None:intergenic | 40.0% |
| !! | ATAATCACAGGTGATGGACT+TGG | + | chr4.4:60910126-60910145 | MS.gene34840:intron | 40.0% |
| !!! | GGTTCTTTATTTTCTCCTCC+AGG | - | chr4.4:60910249-60910268 | None:intergenic | 40.0% |
| !!! | TCAGTTTTGAGAATTCCCCA+AGG | + | chr4.4:60909958-60909977 | MS.gene34840:intron | 40.0% |
| ACAATAGAGCAACCATGTGC+AGG | - | chr4.4:60909802-60909821 | None:intergenic | 45.0% | |
| ACTCGGATCGTGAAAGATCT+CGG | + | chr4.4:60910969-60910988 | MS.gene34840:CDS | 45.0% | |
| AGGATCCTGAGAGAAAGAGA+CGG | + | chr4.4:60910873-60910892 | MS.gene34840:CDS | 45.0% | |
| AGGTAGAGGTAATCGAGATC+GGG | + | chr4.4:60911000-60911019 | MS.gene34840:CDS | 45.0% | |
| AGGTAGTCAATCCCGGATAA+CGG | - | chr4.4:60909097-60909116 | None:intergenic | 45.0% | |
| ATGAAACACGGATACGGACA+CGG | + | chr4.4:60908474-60908493 | MS.gene34840:intron | 45.0% | |
| ATGGGTAGCATACGCTCAAA+AGG | - | chr4.4:60909581-60909600 | None:intergenic | 45.0% | |
| GAATGAGGATGGCAACAGAT+AGG | - | chr4.4:60910049-60910068 | None:intergenic | 45.0% | |
| GATTGCTAAGGAGAAGGCTA+AGG | + | chr4.4:60910793-60910812 | MS.gene34840:intron | 45.0% | |
| GCGAAGAAAACAAAAGGAGC+AGG | + | chr4.4:60910853-60910872 | MS.gene34840:CDS | 45.0% | |
| GGAGACACTTAATACCGAGA+AGG | + | chr4.4:60910503-60910522 | MS.gene34840:CDS | 45.0% | |
| GGGGTTACAAAGAAGTGAGT+TGG | + | chr4.4:60908139-60908158 | MS.gene34840:CDS | 45.0% | |
| GGTATGTGGTTCGTTTCTTG+TGG | + | chr4.4:60910593-60910612 | MS.gene34840:CDS | 45.0% | |
| GTTGAATCTCTTGGTGAAGC+TGG | + | chr4.4:60910280-60910299 | MS.gene34840:CDS | 45.0% | |
| TATGAAGCACGGATACTCCT+CGG | - | chr4.4:60908609-60908628 | None:intergenic | 45.0% | |
| TCAACCTAGACAGTCAATCC+TGG | + | chr4.4:60908831-60908850 | MS.gene34840:intron | 45.0% | |
| TCTCGGGAATATGAAGGTAG+AGG | + | chr4.4:60910986-60911005 | MS.gene34840:CDS | 45.0% | |
| TGTTGACGAAGAGATCGTGA+GGG | - | chr4.4:60908206-60908225 | None:intergenic | 45.0% | |
| TTATCCGGGATTGACTACCT+AGG | + | chr4.4:60909097-60909116 | MS.gene34840:intron | 45.0% | |
| TTCAGCTCGAAACTTGACTG+AGG | + | chr4.4:60908107-60908126 | MS.gene34840:intron | 45.0% | |
| TTGGTACGGTGCACTTCTAA+TGG | - | chr4.4:60909666-60909685 | None:intergenic | 45.0% | |
| TTTGCCAGGATTGACTGTCT+AGG | - | chr4.4:60908838-60908857 | None:intergenic | 45.0% | |
| ! | GACGGAGTGTTTCAAGTGAT+AGG | + | chr4.4:60910891-60910910 | MS.gene34840:CDS | 45.0% |
| ! | GACTTGTTCAATTGGGGCTA+TGG | + | chr4.4:60909625-60909644 | MS.gene34840:intron | 45.0% |
| ! | GGGCTGCAGTTGATTTCAAA+GGG | - | chr4.4:60908730-60908749 | None:intergenic | 45.0% |
| AACGTGATCTGCTCCGATTG+TGG | - | chr4.4:60911081-60911100 | None:intergenic | 50.0% | |
| ACACTCCGTCTCTTTCTCTC+AGG | - | chr4.4:60910881-60910900 | None:intergenic | 50.0% | |
| AGAACTCAGTCTCATGTCGC+AGG | + | chr4.4:60910633-60910652 | MS.gene34840:CDS | 50.0% | |
| AGGTAATCGAGATCGGGGAA+GGG | + | chr4.4:60911006-60911025 | MS.gene34840:CDS | 50.0% | |
| ATCGAGATAGGCAGCGTGAT+AGG | + | chr4.4:60910933-60910952 | MS.gene34840:CDS | 50.0% | |
| ATCTCTTGGTGAAGCTGGGA+AGG | + | chr4.4:60910285-60910304 | MS.gene34840:CDS | 50.0% | |
| ATGGCACTCTGTGAGGTATG+TGG | + | chr4.4:60910579-60910598 | MS.gene34840:CDS | 50.0% | |
| CACGTATGCATCATGCCTTG+GGG | - | chr4.4:60909976-60909995 | None:intergenic | 50.0% | |
| CAGCCTGAGGAAAATTGCGA+CGG | + | chr4.4:60908874-60908893 | MS.gene34840:intron | 50.0% | |
| CCTGGCAAATCCCAAAGTAG+CGG | + | chr4.4:60908849-60908868 | MS.gene34840:intron | 50.0% | |
| CTCGGATCGTGAAAGATCTC+GGG | + | chr4.4:60910970-60910989 | MS.gene34840:CDS | 50.0% | |
| GAAGAAGATGGCACTCTGTG+AGG | + | chr4.4:60910572-60910591 | MS.gene34840:CDS | 50.0% | |
| GACACCTAGGTAGTCAATCC+CGG | - | chr4.4:60909104-60909123 | None:intergenic | 50.0% | |
| GACTTTGGGTCCGTTTGGAT+TGG | + | chr4.4:60908346-60908365 | MS.gene34840:intron | 50.0% | |
| GCACGTATGCATCATGCCTT+GGG | - | chr4.4:60909977-60909996 | None:intergenic | 50.0% | |
| GCAGAGACAGGTACCACAAT+CGG | + | chr4.4:60911065-60911084 | MS.gene34840:CDS | 50.0% | |
| GGTAGAGGTAATCGAGATCG+GGG | + | chr4.4:60911001-60911020 | MS.gene34840:CDS | 50.0% | |
| TGAAACACGGATACGGACAC+GGG | + | chr4.4:60908475-60908494 | MS.gene34840:intron | 50.0% | |
| TGAACAGTTGTCTGTCCTGG+AGG | + | chr4.4:60910231-60910250 | MS.gene34840:CDS | 50.0% | |
| TGAGGATGGCAACAGATAGG+TGG | - | chr4.4:60910046-60910065 | None:intergenic | 50.0% | |
| ! | CGGGCTGCAGTTGATTTCAA+AGG | - | chr4.4:60908731-60908750 | None:intergenic | 50.0% |
| ! | GCAGCATGTTGGCTATGGTA+TGG | + | chr4.4:60910659-60910678 | MS.gene34840:CDS | 50.0% |
| ! | GGAAAGCAGCATGTTGGCTA+TGG | + | chr4.4:60910654-60910673 | MS.gene34840:CDS | 50.0% |
| ! | GTGTTGACGAAGAGATCGTG+AGG | - | chr4.4:60908207-60908226 | None:intergenic | 50.0% |
| ! | TCAGGCTGATCCGCTACTTT+GGG | - | chr4.4:60908862-60908881 | None:intergenic | 50.0% |
| ! | TGTAAGTGTCGTGTCGGTGT+CGG | + | chr4.4:60908572-60908591 | MS.gene34840:intron | 50.0% |
| ! | TTTTCAGCTGTCAGTGGTGG+CGG | - | chr4.4:60910208-60910227 | None:intergenic | 50.0% |
| AACCCCAAAAGTGGGGGTAG+CGG | - | chr4.4:60909062-60909081 | None:intergenic | 55.0% | |
| AGCGGTCAACCCCAAAAGTG+GGG | - | chr4.4:60909069-60909088 | None:intergenic | 55.0% | |
| AGCTCTCCTCGACGAACTCA+TGG | + | chr4.4:60908009-60908028 | MS.gene34840:CDS | 55.0% | |
| CCTGAGGAAAATTGCGACGG+TGG | + | chr4.4:60908877-60908896 | MS.gene34840:intron | 55.0% | |
| CTCAGGCTGATCCGCTACTT+TGG | - | chr4.4:60908863-60908882 | None:intergenic | 55.0% | |
| CTCGACGAACTCATGGGTTC+AGG | + | chr4.4:60908016-60908035 | MS.gene34840:CDS | 55.0% | |
| CTGAACCCATGAGTTCGTCG+AGG | - | chr4.4:60908018-60908037 | None:intergenic | 55.0% | |
| GAGCGGTCAACCCCAAAAGT+GGG | - | chr4.4:60909070-60909089 | None:intergenic | 55.0% | |
| GAGGTAATCGAGATCGGGGA+AGG | + | chr4.4:60911005-60911024 | MS.gene34840:CDS | 55.0% | |
| GCTCTCCTCGACGAACTCAT+GGG | + | chr4.4:60908010-60908029 | MS.gene34840:CDS | 55.0% | |
| GGAAGGACTTTGGGTCCGTT+TGG | + | chr4.4:60908341-60908360 | MS.gene34840:intron | 55.0% | |
| GGCACGTATGCATCATGCCT+TGG | - | chr4.4:60909978-60909997 | None:intergenic | 55.0% | |
| GGTAATCGAGATCGGGGAAG+GGG | + | chr4.4:60911007-60911026 | MS.gene34840:CDS | 55.0% | |
| GTAATCGAGATCGGGGAAGG+GGG | + | chr4.4:60911008-60911027 | MS.gene34840:CDS | 55.0% | |
| GTCAACACGCGCAGTGATCT+CGG | + | chr4.4:60908219-60908238 | MS.gene34840:CDS | 55.0% | |
| GTCGCAGGAAAGCAGCATGT+TGG | + | chr4.4:60910648-60910667 | MS.gene34840:CDS | 55.0% | |
| TAGAGCAACCATGTGCAGGC+AGG | - | chr4.4:60909798-60909817 | None:intergenic | 55.0% | |
| TGTCGGACACGTCTAATCCG+AGG | + | chr4.4:60908589-60908608 | MS.gene34840:intron | 55.0% | |
| TTTCGGGCAAGCTCCTGCAT+CGG | - | chr4.4:60909269-60909288 | None:intergenic | 55.0% | |
| ! | CCACCGTCGCAATTTTCCTC+AGG | - | chr4.4:60908880-60908899 | None:intergenic | 55.0% |
| ! | GGGGGATGGTTTCTAGGTTG+AGG | + | chr4.4:60911026-60911045 | MS.gene34840:CDS | 55.0% |
| !! | ATCCCGCTACCCCCACTTTT+GGG | + | chr4.4:60909056-60909075 | MS.gene34840:intron | 55.0% |
| !! | CAAAGTAGCGGATCAGCCTG+AGG | + | chr4.4:60908861-60908880 | MS.gene34840:intron | 55.0% |
| !! | CCGCTACTTTGGGATTTGCC+AGG | - | chr4.4:60908852-60908871 | None:intergenic | 55.0% |
| ACCCCAAAAGTGGGGGTAGC+GGG | - | chr4.4:60909061-60909080 | None:intergenic | 60.0% | |
| ATGTGCAGGCAGGCAACTGC+AGG | - | chr4.4:60909788-60909807 | None:intergenic | 60.0% | |
| GCGGTCAACCCCAAAAGTGG+GGG | - | chr4.4:60909068-60909087 | None:intergenic | 60.0% | |
| GGAGCGGTCAACCCCAAAAG+TGG | - | chr4.4:60909071-60909090 | None:intergenic | 60.0% | |
| GGGGAAGGGGGATGGTTTCT+AGG | + | chr4.4:60911020-60911039 | MS.gene34840:CDS | 60.0% | |
| TACGGACACGGGACACGACA+CGG | + | chr4.4:60908486-60908505 | MS.gene34840:intron | 60.0% | |
| TGCAGTTGCCTGCCTGCACA+TGG | + | chr4.4:60909787-60909806 | MS.gene34840:intron | 60.0% | |
| ! | GATCCCGCTACCCCCACTTT+TGG | + | chr4.4:60909055-60909074 | MS.gene34840:intron | 60.0% |
| ! | GTCAATCCCGGATAACGGCG+CGG | - | chr4.4:60909092-60909111 | None:intergenic | 60.0% |
| !! | TCCCGCTACCCCCACTTTTG+GGG | + | chr4.4:60909057-60909076 | MS.gene34840:intron | 60.0% |
| TCGAGATCGGGGAAGGGGGA+TGG | + | chr4.4:60911012-60911031 | MS.gene34840:CDS | 65.0% | |
| !! | TCAGCTGTCAGTGGTGGCGG+TGG | - | chr4.4:60910205-60910224 | None:intergenic | 65.0% |
| ACCGCTCCGCGCCGTTATCC+GGG | + | chr4.4:60909083-60909102 | MS.gene34840:intron | 70.0% | |
| GACCGCTCCGCGCCGTTATC+CGG | + | chr4.4:60909082-60909101 | MS.gene34840:intron | 70.0% | |
| ! | TCCCGGATAACGGCGCGGAG+CGG | - | chr4.4:60909087-60909106 | None:intergenic | 70.0% |
| !! | GCTGTCAGTGGTGGCGGTGG+TGG | - | chr4.4:60910202-60910221 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 60907995 | 60911132 | 60907995 | ID=MS.gene34840 |
| chr4.4 | mRNA | 60907995 | 60911132 | 60907995 | ID=MS.gene34840.t1;Parent=MS.gene34840 |
| chr4.4 | exon | 60907995 | 60908037 | 60907995 | ID=MS.gene34840.t1.exon1;Parent=MS.gene34840.t1 |
| chr4.4 | CDS | 60907995 | 60908037 | 60907995 | ID=cds.MS.gene34840.t1;Parent=MS.gene34840.t1 |
| chr4.4 | exon | 60908112 | 60908240 | 60908112 | ID=MS.gene34840.t1.exon2;Parent=MS.gene34840.t1 |
| chr4.4 | CDS | 60908112 | 60908240 | 60908112 | ID=cds.MS.gene34840.t1;Parent=MS.gene34840.t1 |
| chr4.4 | exon | 60909275 | 60909314 | 60909275 | ID=MS.gene34840.t1.exon3;Parent=MS.gene34840.t1 |
| chr4.4 | CDS | 60909275 | 60909314 | 60909275 | ID=cds.MS.gene34840.t1;Parent=MS.gene34840.t1 |
| chr4.4 | exon | 60909962 | 60910037 | 60909962 | ID=MS.gene34840.t1.exon4;Parent=MS.gene34840.t1 |
| chr4.4 | CDS | 60909962 | 60910037 | 60909962 | ID=cds.MS.gene34840.t1;Parent=MS.gene34840.t1 |
| chr4.4 | exon | 60910136 | 60910336 | 60910136 | ID=MS.gene34840.t1.exon5;Parent=MS.gene34840.t1 |
| chr4.4 | CDS | 60910136 | 60910336 | 60910136 | ID=cds.MS.gene34840.t1;Parent=MS.gene34840.t1 |
| chr4.4 | exon | 60910501 | 60910707 | 60910501 | ID=MS.gene34840.t1.exon6;Parent=MS.gene34840.t1 |
| chr4.4 | CDS | 60910501 | 60910707 | 60910501 | ID=cds.MS.gene34840.t1;Parent=MS.gene34840.t1 |
| chr4.4 | exon | 60910794 | 60911132 | 60910794 | ID=MS.gene34840.t1.exon7;Parent=MS.gene34840.t1 |
| chr4.4 | CDS | 60910794 | 60911132 | 60910794 | ID=cds.MS.gene34840.t1;Parent=MS.gene34840.t1 |
| Gene Sequence |
| Protein sequence |
