Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07544.t1 | XP_013468910.1 | 97.4 | 391 | 7 | 1 | 1 | 388 | 1 | 391 | 2.00E-226 | 794.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07544.t1 | A0A072VMB2 | 97.4 | 391 | 7 | 1 | 1 | 388 | 1 | 391 | 1.4e-226 | 794.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049148 | MS.gene07544 | 0.803428 | 3.50E-49 | -1.69E-46 |
| MS.gene049259 | MS.gene07544 | 0.852151 | 5.57E-61 | -1.69E-46 |
| MS.gene050173 | MS.gene07544 | 0.831257 | 1.85E-55 | -1.69E-46 |
| MS.gene051044 | MS.gene07544 | 0.807243 | 5.56E-50 | -1.69E-46 |
| MS.gene053561 | MS.gene07544 | 0.825822 | 3.80E-54 | -1.69E-46 |
| MS.gene054056 | MS.gene07544 | 0.819743 | 9.89E-53 | -1.69E-46 |
| MS.gene055942 | MS.gene07544 | 0.82332 | 1.48E-53 | -1.69E-46 |
| MS.gene058171 | MS.gene07544 | 0.815002 | 1.16E-51 | -1.69E-46 |
| MS.gene058173 | MS.gene07544 | 0.812482 | 4.15E-51 | -1.69E-46 |
| MS.gene058175 | MS.gene07544 | 0.823307 | 1.49E-53 | -1.69E-46 |
| MS.gene058493 | MS.gene07544 | 0.814997 | 1.16E-51 | -1.69E-46 |
| MS.gene059690 | MS.gene07544 | 0.803867 | 2.84E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07544.t1 | MTR_1g078290 | 97.442 | 391 | 7 | 1 | 1 | 388 | 1 | 391 | 0.0 | 795 |
| MS.gene07544.t1 | MTR_1g078290 | 94.892 | 372 | 13 | 2 | 1 | 369 | 1 | 369 | 0.0 | 734 |
| MS.gene07544.t1 | MTR_1g078290 | 97.222 | 360 | 7 | 1 | 1 | 357 | 1 | 360 | 0.0 | 733 |
| MS.gene07544.t1 | MTR_1g078290 | 98.089 | 314 | 6 | 0 | 1 | 314 | 1 | 314 | 0.0 | 649 |
| MS.gene07544.t1 | MTR_2g005330 | 55.618 | 356 | 150 | 3 | 36 | 388 | 34 | 384 | 3.04e-148 | 425 |
| MS.gene07544.t1 | MTR_2g005330 | 57.778 | 315 | 124 | 4 | 36 | 347 | 34 | 342 | 2.57e-132 | 383 |
| MS.gene07544.t1 | MTR_2g012570 | 50.272 | 368 | 161 | 4 | 30 | 388 | 12 | 366 | 5.11e-130 | 378 |
| MS.gene07544.t1 | MTR_2g012570 | 50.272 | 368 | 161 | 4 | 30 | 388 | 38 | 392 | 7.22e-130 | 379 |
| MS.gene07544.t1 | MTR_4g090465 | 57.556 | 311 | 125 | 3 | 79 | 388 | 428 | 732 | 2.69e-125 | 378 |
| MS.gene07544.t1 | MTR_2g005330 | 63.223 | 242 | 88 | 1 | 147 | 388 | 2 | 242 | 3.05e-117 | 341 |
| MS.gene07544.t1 | MTR_2g012570 | 52.063 | 315 | 138 | 3 | 30 | 344 | 12 | 313 | 1.13e-116 | 342 |
| MS.gene07544.t1 | MTR_2g012570 | 52.063 | 315 | 138 | 3 | 30 | 344 | 38 | 339 | 1.32e-116 | 343 |
| MS.gene07544.t1 | MTR_7g033300 | 42.897 | 359 | 181 | 9 | 26 | 379 | 35 | 374 | 8.45e-87 | 268 |
| MS.gene07544.t1 | MTR_3g086610 | 45.695 | 302 | 145 | 7 | 75 | 376 | 98 | 380 | 1.08e-82 | 258 |
| MS.gene07544.t1 | MTR_3g086610 | 48.148 | 270 | 127 | 6 | 75 | 344 | 98 | 354 | 6.65e-82 | 255 |
| MS.gene07544.t1 | MTR_8g089820 | 48.148 | 270 | 127 | 6 | 75 | 344 | 89 | 345 | 2.48e-81 | 254 |
| MS.gene07544.t1 | MTR_8g089815 | 44.371 | 302 | 149 | 7 | 75 | 376 | 97 | 379 | 1.37e-80 | 253 |
| MS.gene07544.t1 | MTR_4g058800 | 48.106 | 264 | 122 | 7 | 75 | 337 | 77 | 326 | 5.68e-79 | 248 |
| MS.gene07544.t1 | MTR_2g094650 | 40.597 | 335 | 181 | 7 | 45 | 379 | 64 | 380 | 1.06e-78 | 248 |
| MS.gene07544.t1 | MTR_2g094650 | 40.597 | 335 | 180 | 8 | 45 | 379 | 64 | 379 | 2.01e-77 | 244 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07544.t1 | AT4G18530 | 56.555 | 389 | 141 | 5 | 20 | 387 | 8 | 389 | 2.01e-155 | 443 |
| MS.gene07544.t1 | AT4G18530 | 56.555 | 389 | 141 | 5 | 20 | 387 | 3 | 384 | 2.24e-155 | 443 |
| MS.gene07544.t1 | AT4G12840 | 54.115 | 401 | 159 | 5 | 2 | 388 | 5 | 394 | 4.41e-155 | 442 |
| MS.gene07544.t1 | AT4G12840 | 53.846 | 403 | 162 | 5 | 1 | 388 | 1 | 394 | 8.77e-155 | 442 |
| MS.gene07544.t1 | AT4G12840 | 60.518 | 309 | 99 | 4 | 94 | 388 | 1 | 300 | 1.21e-135 | 390 |
| MS.gene07544.t1 | AT1G11170 | 54.890 | 317 | 129 | 6 | 79 | 386 | 83 | 394 | 2.75e-122 | 361 |
| MS.gene07544.t1 | AT1G11170 | 54.890 | 317 | 129 | 6 | 79 | 386 | 83 | 394 | 2.75e-122 | 361 |
| MS.gene07544.t1 | AT1G11170 | 54.890 | 317 | 129 | 6 | 79 | 386 | 83 | 394 | 2.75e-122 | 361 |
| MS.gene07544.t1 | AT1G11170 | 54.890 | 317 | 129 | 6 | 79 | 386 | 83 | 394 | 2.75e-122 | 361 |
| MS.gene07544.t1 | AT4G18530 | 55.627 | 311 | 121 | 4 | 13 | 313 | 1 | 304 | 4.70e-122 | 355 |
| MS.gene07544.t1 | AT1G61240 | 54.430 | 316 | 131 | 4 | 79 | 385 | 13 | 324 | 7.12e-121 | 354 |
| MS.gene07544.t1 | AT1G61240 | 54.430 | 316 | 131 | 4 | 79 | 385 | 80 | 391 | 6.41e-120 | 354 |
| MS.gene07544.t1 | AT1G61240 | 54.430 | 316 | 131 | 4 | 79 | 385 | 80 | 391 | 6.41e-120 | 354 |
| MS.gene07544.t1 | AT1G61240 | 54.430 | 316 | 131 | 4 | 79 | 385 | 80 | 391 | 6.41e-120 | 354 |
| MS.gene07544.t1 | AT1G61240 | 54.430 | 316 | 131 | 4 | 79 | 385 | 80 | 391 | 6.41e-120 | 354 |
| MS.gene07544.t1 | AT1G61240 | 54.430 | 316 | 131 | 4 | 79 | 385 | 80 | 391 | 6.41e-120 | 354 |
| MS.gene07544.t1 | AT1G61240 | 54.430 | 316 | 131 | 4 | 79 | 385 | 80 | 391 | 6.41e-120 | 354 |
| MS.gene07544.t1 | AT1G61240 | 54.296 | 291 | 123 | 3 | 79 | 369 | 80 | 360 | 1.59e-110 | 328 |
| MS.gene07544.t1 | AT1G11170 | 56.985 | 272 | 109 | 5 | 79 | 347 | 83 | 349 | 3.48e-110 | 328 |
| MS.gene07544.t1 | AT1G11170 | 58.462 | 260 | 102 | 4 | 79 | 337 | 83 | 337 | 3.70e-110 | 327 |
| MS.gene07544.t1 | AT1G11170 | 58.462 | 260 | 102 | 4 | 79 | 337 | 83 | 337 | 3.70e-110 | 327 |
| MS.gene07544.t1 | AT1G11170 | 57.203 | 236 | 95 | 4 | 79 | 313 | 83 | 313 | 5.73e-96 | 290 |
| MS.gene07544.t1 | AT1G67850 | 45.902 | 305 | 146 | 7 | 75 | 379 | 85 | 370 | 1.37e-82 | 258 |
| MS.gene07544.t1 | AT1G67850 | 45.902 | 305 | 146 | 7 | 75 | 379 | 101 | 386 | 2.30e-82 | 258 |
| MS.gene07544.t1 | AT1G67850 | 45.902 | 305 | 146 | 7 | 75 | 379 | 101 | 386 | 2.30e-82 | 258 |
| MS.gene07544.t1 | AT1G67850 | 45.902 | 305 | 146 | 7 | 75 | 379 | 101 | 386 | 2.30e-82 | 258 |
| MS.gene07544.t1 | AT1G67850 | 45.902 | 305 | 146 | 7 | 75 | 379 | 101 | 386 | 2.30e-82 | 258 |
| MS.gene07544.t1 | AT1G67850 | 45.902 | 305 | 146 | 7 | 75 | 379 | 101 | 386 | 2.30e-82 | 258 |
| MS.gene07544.t1 | AT1G67850 | 45.902 | 305 | 146 | 7 | 75 | 379 | 101 | 386 | 2.30e-82 | 258 |
| MS.gene07544.t1 | AT3G26440 | 41.144 | 367 | 186 | 11 | 16 | 376 | 12 | 354 | 8.46e-82 | 255 |
| MS.gene07544.t1 | AT3G26440 | 42.330 | 352 | 177 | 11 | 27 | 376 | 51 | 378 | 3.84e-81 | 254 |
| MS.gene07544.t1 | AT3G26440 | 42.330 | 352 | 177 | 11 | 27 | 376 | 51 | 378 | 3.84e-81 | 254 |
| MS.gene07544.t1 | AT3G26440 | 42.330 | 352 | 177 | 11 | 27 | 376 | 74 | 401 | 7.33e-81 | 254 |
| MS.gene07544.t1 | AT3G26440 | 42.330 | 352 | 177 | 11 | 27 | 376 | 74 | 401 | 9.19e-81 | 254 |
| MS.gene07544.t1 | AT1G24570 | 48.302 | 265 | 124 | 6 | 75 | 338 | 84 | 336 | 1.80e-80 | 252 |
| MS.gene07544.t1 | AT3G27470 | 39.776 | 357 | 185 | 9 | 27 | 372 | 38 | 375 | 2.62e-80 | 252 |
| MS.gene07544.t1 | AT3G27470 | 39.776 | 357 | 185 | 9 | 27 | 372 | 38 | 375 | 2.62e-80 | 252 |
| MS.gene07544.t1 | AT3G27470 | 39.776 | 357 | 185 | 9 | 27 | 372 | 38 | 375 | 2.62e-80 | 252 |
| MS.gene07544.t1 | AT3G27470 | 39.776 | 357 | 185 | 9 | 27 | 372 | 38 | 375 | 2.62e-80 | 252 |
| MS.gene07544.t1 | AT1G13000 | 44.918 | 305 | 149 | 7 | 75 | 379 | 105 | 390 | 2.73e-80 | 252 |
| MS.gene07544.t1 | AT1G13000 | 44.918 | 305 | 149 | 7 | 75 | 379 | 105 | 390 | 2.73e-80 | 252 |
| MS.gene07544.t1 | AT1G13000 | 44.918 | 305 | 149 | 7 | 75 | 379 | 105 | 390 | 2.73e-80 | 252 |
| MS.gene07544.t1 | AT1G13000 | 44.918 | 305 | 149 | 7 | 75 | 379 | 105 | 390 | 2.73e-80 | 252 |
| MS.gene07544.t1 | AT3G26440 | 44.089 | 313 | 155 | 8 | 27 | 337 | 51 | 345 | 4.86e-80 | 250 |
| MS.gene07544.t1 | AT3G27470 | 39.776 | 357 | 185 | 9 | 27 | 372 | 38 | 375 | 5.50e-80 | 251 |
| MS.gene07544.t1 | AT1G08040 | 43.092 | 304 | 154 | 7 | 75 | 378 | 84 | 368 | 3.36e-79 | 248 |
| MS.gene07544.t1 | AT1G08040 | 43.092 | 304 | 154 | 7 | 75 | 378 | 88 | 372 | 4.25e-79 | 248 |
| MS.gene07544.t1 | AT1G08040 | 43.092 | 304 | 154 | 7 | 75 | 378 | 88 | 372 | 4.25e-79 | 248 |
| MS.gene07544.t1 | AT1G08040 | 43.092 | 304 | 154 | 7 | 75 | 378 | 88 | 372 | 4.25e-79 | 248 |
| MS.gene07544.t1 | AT2G28310 | 43.934 | 305 | 152 | 7 | 75 | 379 | 81 | 366 | 6.64e-79 | 248 |
| MS.gene07544.t1 | AT2G28310 | 43.934 | 305 | 152 | 7 | 75 | 379 | 81 | 366 | 6.64e-79 | 248 |
| MS.gene07544.t1 | AT2G28310 | 43.934 | 305 | 152 | 7 | 75 | 379 | 81 | 366 | 6.64e-79 | 248 |
| MS.gene07544.t1 | AT1G24570 | 48.092 | 262 | 123 | 6 | 78 | 338 | 80 | 329 | 1.17e-78 | 247 |
| MS.gene07544.t1 | AT1G13000 | 49.791 | 239 | 108 | 5 | 75 | 313 | 105 | 331 | 1.24e-73 | 233 |
| MS.gene07544.t1 | AT1G11170 | 56.571 | 175 | 73 | 2 | 79 | 253 | 83 | 254 | 2.24e-65 | 209 |
| MS.gene07544.t1 | AT2G25905 | 55.833 | 120 | 51 | 2 | 112 | 230 | 109 | 227 | 5.36e-39 | 139 |
Find 78 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTGGAGCTGAGACCTTTA+TGG | 0.202931 | 1.2:+62388488 | MS.gene07544:CDS |
| TGTTTATATGTAATCTTTCC+AGG | 0.314586 | 1.2:+62388089 | MS.gene07544:CDS |
| TTGTGTCTGGTACATGATTC+AGG | 0.381583 | 1.2:+62390177 | MS.gene07544:CDS |
| GCAGGTGATGACTTGATATC+TGG | 0.391084 | 1.2:-62387828 | None:intergenic |
| ACATTTAAAGCTGTTATTGA+TGG | 0.400949 | 1.2:+62389979 | MS.gene07544:CDS |
| TAAAGGTCTCAGCTCCAAAC+TGG | 0.403016 | 1.2:-62388485 | None:intergenic |
| AGGTATTGTACATACTTCTC+AGG | 0.405666 | 1.2:-62389624 | None:intergenic |
| TGCACATGTTGCTATTGAAA+TGG | 0.405863 | 1.2:-62391420 | None:intergenic |
| AGTCGACAAGATGGTCAAAA+AGG | 0.413897 | 1.2:+62389197 | MS.gene07544:CDS |
| CACTACAATCGTCCCACTCT+TGG | 0.414064 | 1.2:+62390647 | MS.gene07544:CDS |
| ACGTTGGGTCAAGGCGGTTA+AGG | 0.422001 | 1.2:+62391377 | MS.gene07544:CDS |
| TTTCAGATGGATAGAAATGA+TGG | 0.430064 | 1.2:+62390126 | MS.gene07544:intron |
| GAGCTGCGTGGCGTTGTGTC+TGG | 0.432485 | 1.2:+62390164 | MS.gene07544:CDS |
| GTTTCTATTGTCAAAGAAGA+AGG | 0.437319 | 1.2:+62389759 | MS.gene07544:CDS |
| CACGCAGCTCTTGAGAAAAC+AGG | 0.450284 | 1.2:-62390151 | None:intergenic |
| TTCAGATTCATCTCAGGAAA+AGG | 0.450344 | 1.2:+62390806 | MS.gene07544:CDS |
| AGCTTGTTTGCGATGGCAGT+TGG | 0.451629 | 1.2:+62389156 | MS.gene07544:CDS |
| TGCATACTTATGATAGATGC+AGG | 0.458594 | 1.2:+62388307 | MS.gene07544:CDS |
| AAAGCTGTTATTGATGGTAA+AGG | 0.462651 | 1.2:+62389985 | MS.gene07544:CDS |
| AGTCTCGAGTACTTCCAGTT+TGG | 0.463403 | 1.2:+62388471 | MS.gene07544:CDS |
| CCATTCTTCGACATCCATAA+AGG | 0.463933 | 1.2:-62388502 | None:intergenic |
| ATCGCAAACAAGCTGGTTGA+TGG | 0.464332 | 1.2:-62389147 | None:intergenic |
| CATATAGCGGTAGTCGATCA+AGG | 0.469047 | 1.2:+62389398 | MS.gene07544:CDS |
| TGGAAGTGAAGCGTTACCTC+AGG | 0.471212 | 1.2:+62388444 | MS.gene07544:CDS |
| GCAGCTTGGCTACTGTTCTC+AGG | 0.478528 | 1.2:+62390317 | MS.gene07544:CDS |
| ACGAATGGAAGAAATTCAAA+TGG | 0.484655 | 1.2:+62389360 | MS.gene07544:CDS |
| GCAGGTTTCAGATTCATCTC+AGG | 0.487141 | 1.2:+62390800 | MS.gene07544:intron |
| GTTATCTGTGCCTCCAAGAG+TGG | 0.494695 | 1.2:-62390660 | None:intergenic |
| TCATACTCAGCAACTATGTC+GGG | 0.496770 | 1.2:-62389555 | None:intergenic |
| CGTCGACATTTCCATCATAG+TGG | 0.497517 | 1.2:-62389340 | None:intergenic |
| CGGTTAAGGAGGATAAATGT+TGG | 0.503478 | 1.2:+62391391 | MS.gene07544:CDS |
| TTTCTATTGTCAAAGAAGAA+GGG | 0.503868 | 1.2:+62389760 | MS.gene07544:CDS |
| ACAAATAATAAAAGTGCCCC+TGG | 0.506618 | 1.2:-62388107 | None:intergenic |
| ATATCAAGTCATCACCTGCT+AGG | 0.510981 | 1.2:+62387832 | MS.gene07544:CDS |
| TACAATCGTCCCACTCTTGG+AGG | 0.517019 | 1.2:+62390650 | MS.gene07544:CDS |
| TTGTTTAGTAGAAGCAGTGC+AGG | 0.518852 | 1.2:+62388416 | MS.gene07544:intron |
| ATCATACTCAGCAACTATGT+CGG | 0.519378 | 1.2:-62389556 | None:intergenic |
| AGCACAGCTCCTCCTTGCAC+CGG | 0.522368 | 1.2:+62390021 | MS.gene07544:CDS |
| CGGTAGTCGATCAAGGCAAA+TGG | 0.523052 | 1.2:+62389405 | MS.gene07544:CDS |
| AAGAGGTTACGTACCCTAGC+AGG | 0.533358 | 1.2:-62387846 | None:intergenic |
| ATCAACCAGCTTGTTTGCGA+TGG | 0.533527 | 1.2:+62389149 | MS.gene07544:CDS |
| GTTTATATGTAATCTTTCCA+GGG | 0.534679 | 1.2:+62388090 | MS.gene07544:CDS |
| AACTGCCATCGCAAACAAGC+TGG | 0.536102 | 1.2:-62389154 | None:intergenic |
| GGTTAAGGAGGATAAATGTT+GGG | 0.545766 | 1.2:+62391392 | MS.gene07544:CDS |
| CCTTTATGGATGTCGAAGAA+TGG | 0.547576 | 1.2:+62388502 | MS.gene07544:CDS |
| TTAATTATTTACCCGGTGCA+AGG | 0.552167 | 1.2:-62390033 | None:intergenic |
| TATCAAGTCATCACCTGCTA+GGG | 0.571345 | 1.2:+62387833 | MS.gene07544:CDS |
| ATGATGGAAATGTCGACGAA+TGG | 0.572552 | 1.2:+62389345 | MS.gene07544:CDS |
| GCACAGCTCCTCCTTGCACC+GGG | 0.572784 | 1.2:+62390022 | MS.gene07544:CDS |
| TAGAAGCAGTGCAGGCCTAG+TGG | 0.573391 | 1.2:+62388424 | MS.gene07544:intron |
| GAAAGATTTAGTCGACAAGA+TGG | 0.580046 | 1.2:+62389188 | MS.gene07544:CDS |
| GCATATCTAGTCCCCACGCA+TGG | 0.583645 | 1.2:-62390296 | None:intergenic |
| ATTGATGGTAAAGGCTGTGA+TGG | 0.584608 | 1.2:+62389994 | MS.gene07544:CDS |
| GGTAAGGAGACTTTCTTACA+AGG | 0.584746 | 1.2:+62391335 | MS.gene07544:intron |
| GATGACTTGATATCTGGCAT+TGG | 0.586247 | 1.2:-62387822 | None:intergenic |
| GAACGACTTGATCCATGCGT+GGG | 0.589877 | 1.2:+62390284 | MS.gene07544:intron |
| TTTATATGTAATCTTTCCAG+GGG | 0.591637 | 1.2:+62388091 | MS.gene07544:CDS |
| TTATCTGTGCCTCCAAGAGT+GGG | 0.596556 | 1.2:-62390659 | None:intergenic |
| AAATTACCGCACGTGGTAGG+AGG | 0.599371 | 1.2:+62389835 | MS.gene07544:CDS |
| TTGGGTCAAGGCGGTTAAGG+AGG | 0.601086 | 1.2:+62391380 | MS.gene07544:CDS |
| GTAGGAGGTCAAAAGTGCAC+AGG | 0.604453 | 1.2:+62389850 | MS.gene07544:CDS |
| GGAAGTGAAGCGTTACCTCA+GGG | 0.611369 | 1.2:+62388445 | MS.gene07544:CDS |
| GGTATTGTACATACTTCTCA+GGG | 0.613026 | 1.2:-62389623 | None:intergenic |
| TTCCTTTGGGATGAGGACCT+AGG | 0.614499 | 1.2:+62389585 | MS.gene07544:CDS |
| CATCATCAAATTACCGCACG+TGG | 0.620146 | 1.2:+62389828 | MS.gene07544:CDS |
| CTCCTAGGTCCTCATCCCAA+AGG | 0.625352 | 1.2:-62389587 | None:intergenic |
| ATACTCACAAAGCTACAAAG+AGG | 0.632222 | 1.2:+62388154 | MS.gene07544:CDS |
| ATCAAATTACCGCACGTGGT+AGG | 0.635282 | 1.2:+62389832 | MS.gene07544:CDS |
| TGATGATGTCGTTCATATAG+CGG | 0.641214 | 1.2:+62389385 | MS.gene07544:CDS |
| AGAACGACTTGATCCATGCG+TGG | 0.644784 | 1.2:+62390283 | MS.gene07544:intron |
| TGGGGACTAGATATGCAGCT+TGG | 0.650458 | 1.2:+62390303 | MS.gene07544:CDS |
| ATTATTTACCCGGTGCAAGG+AGG | 0.658449 | 1.2:-62390030 | None:intergenic |
| GCATACTTATGATAGATGCA+GGG | 0.660134 | 1.2:+62388308 | MS.gene07544:CDS |
| ATTGTAGTGAATAATGTACT+CGG | 0.667033 | 1.2:-62390633 | None:intergenic |
| AACGACTTGATCCATGCGTG+GGG | 0.688349 | 1.2:+62390285 | MS.gene07544:CDS |
| GGTAACGCTTCACTTCCACT+AGG | 0.692454 | 1.2:-62388439 | None:intergenic |
| ATTGTACATACTTCTCAGGG+TGG | 0.711500 | 1.2:-62389620 | None:intergenic |
| GTACTCGAGACTATACCCTG+AGG | 0.801494 | 1.2:-62388460 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAATATATGAAAAAAAAAT+AGG | + | chr1.2:62387923-62387942 | MS.gene07544:intron | 10.0% |
| !! | TAAAAAATTATATTCTGTGT+TGG | - | chr1.2:62391102-62391121 | None:intergenic | 15.0% |
| !! | TATATATGATCATTATCATT+CGG | + | chr1.2:62390363-62390382 | MS.gene07544:intron | 15.0% |
| !!! | TTAATTTTCCAAAAACATTA+AGG | + | chr1.2:62389696-62389715 | MS.gene07544:intron | 15.0% |
| !!! | TTTTTCCTTTATGATTTTAA+AGG | + | chr1.2:62389733-62389752 | MS.gene07544:intron | 15.0% |
| !! | AATCACAATCATATAAAGTT+TGG | + | chr1.2:62389661-62389680 | MS.gene07544:intron | 20.0% |
| !! | AATTAATTCAAGGTTATGAA+AGG | - | chr1.2:62388004-62388023 | None:intergenic | 20.0% |
| !! | ATTTGATTCTAAATGAAATG+AGG | - | chr1.2:62390951-62390970 | None:intergenic | 20.0% |
| !! | CCAAAAATTAATTATTTACC+CGG | - | chr1.2:62390043-62390062 | None:intergenic | 20.0% |
| !! | GATAAGTGATATTCAAAAAT+TGG | - | chr1.2:62389481-62389500 | None:intergenic | 20.0% |
| !! | GATATTCAAAAATTGGATAT+GGG | - | chr1.2:62389474-62389493 | None:intergenic | 20.0% |
| !! | GGTTAGAAAAAATTAATTCA+AGG | - | chr1.2:62388014-62388033 | None:intergenic | 20.0% |
| !! | TGATATTCAAAAATTGGATA+TGG | - | chr1.2:62389475-62389494 | None:intergenic | 20.0% |
| !! | TGTTCTTTCAAATTTCTAAA+TGG | + | chr1.2:62388220-62388239 | MS.gene07544:intron | 20.0% |
| !! | TTGTTTATGTATGATCAATA+GGG | + | chr1.2:62390578-62390597 | MS.gene07544:intron | 20.0% |
| !!! | ACATACCTTTAAAATCATAA+AGG | - | chr1.2:62389741-62389760 | None:intergenic | 20.0% |
| !!! | ACTAATATATTATTTTGGAG+GGG | + | chr1.2:62391307-62391326 | MS.gene07544:intron | 20.0% |
| !!! | AGATATTTTCAAAAAACGTT+GGG | + | chr1.2:62391362-62391381 | MS.gene07544:CDS | 20.0% |
| !!! | AGTATGATTATATTTTCCTT+TGG | + | chr1.2:62389571-62389590 | MS.gene07544:CDS | 20.0% |
| !!! | AGTGATGAAGATTTTAAATA+TGG | - | chr1.2:62388987-62389006 | None:intergenic | 20.0% |
| !!! | GACTAATATATTATTTTGGA+GGG | + | chr1.2:62391306-62391325 | MS.gene07544:intron | 20.0% |
| !!! | GGAATCAAAATTTTTGATAT+AGG | + | chr1.2:62387944-62387963 | MS.gene07544:intron | 20.0% |
| !!! | GTATGATTATATTTTCCTTT+GGG | + | chr1.2:62389572-62389591 | MS.gene07544:CDS | 20.0% |
| !!! | GTGTGACTAATATATTATTT+TGG | + | chr1.2:62391302-62391321 | MS.gene07544:intron | 20.0% |
| !!! | TAGATATTTTCAAAAAACGT+TGG | + | chr1.2:62391361-62391380 | MS.gene07544:CDS | 20.0% |
| !!! | TGACTAATATATTATTTTGG+AGG | + | chr1.2:62391305-62391324 | MS.gene07544:intron | 20.0% |
| !!! | TTGTTTTCTCTTAATACTTT+TGG | + | chr1.2:62388332-62388351 | MS.gene07544:intron | 20.0% |
| ! | AAACTATCAAGCTTCAAAAA+TGG | + | chr1.2:62388270-62388289 | MS.gene07544:CDS | 25.0% |
| ! | AACGAATAACTATTGTGTAA+CGG | + | chr1.2:62390502-62390521 | MS.gene07544:intron | 25.0% |
| ! | AGACGGTTATAAAAATTGAA+AGG | - | chr1.2:62387880-62387899 | None:intergenic | 25.0% |
| ! | AGTATCAGTAATGAGAAATT+TGG | - | chr1.2:62389243-62389262 | None:intergenic | 25.0% |
| ! | ATCTTCATCACTATAACATA+TGG | + | chr1.2:62388995-62389014 | MS.gene07544:intron | 25.0% |
| ! | ATTGTAGTGAATAATGTACT+CGG | - | chr1.2:62390636-62390655 | None:intergenic | 25.0% |
| ! | CTATTGATCATACATAAACA+AGG | - | chr1.2:62390579-62390598 | None:intergenic | 25.0% |
| ! | CTTCAACTGCATAAAATTAA+GGG | - | chr1.2:62390089-62390108 | None:intergenic | 25.0% |
| ! | CTTGTTTATGTATGATCAAT+AGG | + | chr1.2:62390577-62390596 | MS.gene07544:intron | 25.0% |
| ! | CTTTCAAATTTCTAAATGGT+TGG | + | chr1.2:62388224-62388243 | MS.gene07544:intron | 25.0% |
| ! | GTTTATATGTAATCTTTCCA+GGG | + | chr1.2:62388090-62388109 | MS.gene07544:CDS | 25.0% |
| ! | TCTTCAACTGCATAAAATTA+AGG | - | chr1.2:62390090-62390109 | None:intergenic | 25.0% |
| ! | TGTTTATATGTAATCTTTCC+AGG | + | chr1.2:62388089-62388108 | MS.gene07544:CDS | 25.0% |
| ! | TTCATTGCATAATAACAAGA+CGG | - | chr1.2:62387897-62387916 | None:intergenic | 25.0% |
| ! | TTGAAGAAGAATCTCAAATA+TGG | - | chr1.2:62391186-62391205 | None:intergenic | 25.0% |
| ! | TTGGACAAAAAACTCTTTAA+AGG | - | chr1.2:62389224-62389243 | None:intergenic | 25.0% |
| ! | TTTATATGTAATCTTTCCAG+GGG | + | chr1.2:62388091-62388110 | MS.gene07544:CDS | 25.0% |
| ! | TTTCTATTGTCAAAGAAGAA+GGG | + | chr1.2:62389760-62389779 | MS.gene07544:CDS | 25.0% |
| ! | TTTGGAAAATTAAAATCCGA+TGG | - | chr1.2:62389689-62389708 | None:intergenic | 25.0% |
| !! | AATGAATGTCCTTTTATCTT+AGG | - | chr1.2:62390900-62390919 | None:intergenic | 25.0% |
| !! | ACACTAATCCTTAATGTTTT+TGG | - | chr1.2:62389707-62389726 | None:intergenic | 25.0% |
| !! | ACATTTAAAGCTGTTATTGA+TGG | + | chr1.2:62389979-62389998 | MS.gene07544:CDS | 25.0% |
| !! | ACATTTTTGTTCATCATTTG+CGG | + | chr1.2:62390250-62390269 | MS.gene07544:intron | 25.0% |
| !! | AGATAAAAGGACATTCATTT+TGG | + | chr1.2:62390901-62390920 | MS.gene07544:intron | 25.0% |
| !! | ATGAATGTCCTTTTATCTTA+GGG | - | chr1.2:62390899-62390918 | None:intergenic | 25.0% |
| !! | CCGGGTAAATAATTAATTTT+TGG | + | chr1.2:62390040-62390059 | MS.gene07544:intron | 25.0% |
| !! | GAAAGAACACAAATTTTACT+CGG | - | chr1.2:62388209-62388228 | None:intergenic | 25.0% |
| !! | TGTTATTTGTGTTTCTTCTT+TGG | + | chr1.2:62388646-62388665 | MS.gene07544:intron | 25.0% |
| !! | TTGAAAAAACTTGTCCTTTT+GGG | + | chr1.2:62390999-62391018 | MS.gene07544:intron | 25.0% |
| !! | TTTGAAAAAACTTGTCCTTT+TGG | + | chr1.2:62390998-62391017 | MS.gene07544:intron | 25.0% |
| !! | TTTTCAAAGAGAATATGATC+TGG | - | chr1.2:62390986-62391005 | None:intergenic | 25.0% |
| !!! | ATGAACTAATTTGTTTCAGA+TGG | + | chr1.2:62390113-62390132 | MS.gene07544:intron | 25.0% |
| !!! | CTAATATATTATTTTGGAGG+GGG | + | chr1.2:62391308-62391327 | MS.gene07544:intron | 25.0% |
| !!! | CTATTAGTCATTTTCATTGA+GGG | - | chr1.2:62391147-62391166 | None:intergenic | 25.0% |
| !!! | GTGTATTATTTTGGATGTTT+AGG | + | chr1.2:62388370-62388389 | MS.gene07544:intron | 25.0% |
| !!! | TCTAAGAAGTTTTTTCTTCA+TGG | - | chr1.2:62388596-62388615 | None:intergenic | 25.0% |
| !!! | TTATTTTGGATGTTTAGGTT+TGG | + | chr1.2:62388375-62388394 | MS.gene07544:intron | 25.0% |
| AACAATGTAAAGGTGACATA+TGG | + | chr1.2:62388822-62388841 | MS.gene07544:intron | 30.0% | |
| ACAATAGACAGAAATTTGAG+TGG | - | chr1.2:62388568-62388587 | None:intergenic | 30.0% | |
| ACGAATGGAAGAAATTCAAA+TGG | + | chr1.2:62389360-62389379 | MS.gene07544:CDS | 30.0% | |
| ATTGAAAGGAAGAAAAGAAG+AGG | - | chr1.2:62387866-62387885 | None:intergenic | 30.0% | |
| CAGATACAGAAATGCAATTA+TGG | - | chr1.2:62389880-62389899 | None:intergenic | 30.0% | |
| GTGATTACGCAAAACTAAAA+AGG | - | chr1.2:62389647-62389666 | None:intergenic | 30.0% | |
| GTTTCTATTGTCAAAGAAGA+AGG | + | chr1.2:62389759-62389778 | MS.gene07544:CDS | 30.0% | |
| TCAAAAATTGGATATGGGAA+TGG | - | chr1.2:62389469-62389488 | None:intergenic | 30.0% | |
| TCTCAAATATGGAAGCTAAT+TGG | - | chr1.2:62391175-62391194 | None:intergenic | 30.0% | |
| TGCTTCAAAACACAAATTCA+AGG | - | chr1.2:62388035-62388054 | None:intergenic | 30.0% | |
| TTCTTAGAGTAGTTAGTGTA+AGG | + | chr1.2:62388608-62388627 | MS.gene07544:intron | 30.0% | |
| TTTCAGATGGATAGAAATGA+TGG | + | chr1.2:62390126-62390145 | MS.gene07544:intron | 30.0% | |
| TTTCAGTCAAGATTTGTACT+TGG | + | chr1.2:62388753-62388772 | MS.gene07544:intron | 30.0% | |
| TTTCTGAGTGAACAATGTAA+AGG | + | chr1.2:62388812-62388831 | MS.gene07544:intron | 30.0% | |
| ! | AAAGCTGTTATTGATGGTAA+AGG | + | chr1.2:62389985-62390004 | MS.gene07544:CDS | 30.0% |
| ! | AGGATGAGTACTAGTATTTT+TGG | - | chr1.2:62390931-62390950 | None:intergenic | 30.0% |
| ! | ATTTTGCTTTCAGTTTCATC+TGG | + | chr1.2:62390441-62390460 | MS.gene07544:intron | 30.0% |
| ! | CATATAAAGTTTGGTTCCAT+CGG | + | chr1.2:62389670-62389689 | MS.gene07544:intron | 30.0% |
| ! | TAAAAGGACATTCATTTTGG+TGG | + | chr1.2:62390904-62390923 | MS.gene07544:intron | 30.0% |
| ! | TTTTGCTTTCAGTTTCATCT+GGG | + | chr1.2:62390442-62390461 | MS.gene07544:intron | 30.0% |
| !! | GCTATTAGTCATTTTCATTG+AGG | - | chr1.2:62391148-62391167 | None:intergenic | 30.0% |
| !! | TTATATTCTGTGTTGGCTAA+TGG | - | chr1.2:62391095-62391114 | None:intergenic | 30.0% |
| !!! | AATTTGTGTTTTGAAGCAGA+CGG | + | chr1.2:62388037-62388056 | MS.gene07544:intron | 30.0% |
| !!! | TTATATTTTCCTTTGGGATG+AGG | + | chr1.2:62389578-62389597 | MS.gene07544:CDS | 30.0% |
| AAAGGTGACATATGGTTGTA+AGG | + | chr1.2:62388830-62388849 | MS.gene07544:intron | 35.0% | |
| AAGGTGACATATGGTTGTAA+GGG | + | chr1.2:62388831-62388850 | MS.gene07544:intron | 35.0% | |
| ACAGAAATTTGAGTGGTGAA+GGG | - | chr1.2:62388561-62388580 | None:intergenic | 35.0% | |
| ACCACAATTGCAGATACATA+AGG | - | chr1.2:62388908-62388927 | None:intergenic | 35.0% | |
| ACTGCAATTTGTGTAGAAAG+AGG | - | chr1.2:62389289-62389308 | None:intergenic | 35.0% | |
| AGCACTTGATCCTAAAAAGT+CGG | + | chr1.2:62389800-62389819 | MS.gene07544:CDS | 35.0% | |
| ATACTCACAAAGCTACAAAG+AGG | + | chr1.2:62388154-62388173 | MS.gene07544:CDS | 35.0% | |
| ATCATACTCAGCAACTATGT+CGG | - | chr1.2:62389559-62389578 | None:intergenic | 35.0% | |
| CTAATTGCTTACATTTGAGC+AGG | + | chr1.2:62389113-62389132 | MS.gene07544:intron | 35.0% | |
| CTGAATGTCCCTAAGATAAA+AGG | + | chr1.2:62390888-62390907 | MS.gene07544:intron | 35.0% | |
| CTGATACTCTGTTTAATCCA+TGG | + | chr1.2:62389255-62389274 | MS.gene07544:intron | 35.0% | |
| CTGCAATTTGTGTAGAAAGA+GGG | - | chr1.2:62389288-62389307 | None:intergenic | 35.0% | |
| GAAAGATTTAGTCGACAAGA+TGG | + | chr1.2:62389188-62389207 | MS.gene07544:CDS | 35.0% | |
| GCATACTTATGATAGATGCA+GGG | + | chr1.2:62388308-62388327 | MS.gene07544:CDS | 35.0% | |
| GGTATTGTACATACTTCTCA+GGG | - | chr1.2:62389626-62389645 | None:intergenic | 35.0% | |
| GGTGATCGAACAAAAAATGT+TGG | + | chr1.2:62390599-62390618 | MS.gene07544:CDS | 35.0% | |
| GGTTAAGGAGGATAAATGTT+GGG | + | chr1.2:62391392-62391411 | MS.gene07544:CDS | 35.0% | |
| TCAAGCTTCAAAAATGGTGT+AGG | + | chr1.2:62388276-62388295 | MS.gene07544:CDS | 35.0% | |
| TCCTTATGTATCTGCAATTG+TGG | + | chr1.2:62388904-62388923 | MS.gene07544:intron | 35.0% | |
| TGACTGAAAGAATCCTTGAT+CGG | - | chr1.2:62388742-62388761 | None:intergenic | 35.0% | |
| TGCATACTTATGATAGATGC+AGG | + | chr1.2:62388307-62388326 | MS.gene07544:CDS | 35.0% | |
| TGTGAAAACTGAAATCACTC+AGG | - | chr1.2:62389444-62389463 | None:intergenic | 35.0% | |
| TTAATTATTTACCCGGTGCA+AGG | - | chr1.2:62390036-62390055 | None:intergenic | 35.0% | |
| TTCAGATTCATCTCAGGAAA+AGG | + | chr1.2:62390806-62390825 | MS.gene07544:CDS | 35.0% | |
| TTCGATAGTACTCACATCTA+TGG | + | chr1.2:62389925-62389944 | MS.gene07544:intron | 35.0% | |
| TTGGCAATGACAATTCAATG+TGG | + | chr1.2:62390059-62390078 | MS.gene07544:intron | 35.0% | |
| TTTCAAAAAACGTTGGGTCA+AGG | + | chr1.2:62391368-62391387 | MS.gene07544:CDS | 35.0% | |
| TTTGCTTTCAGTTTCATCTG+GGG | + | chr1.2:62390443-62390462 | MS.gene07544:intron | 35.0% | |
| ! | AAAAAACTTGTCCTTTTGGG+TGG | + | chr1.2:62391002-62391021 | MS.gene07544:intron | 35.0% |
| ! | AGGTATTGTACATACTTCTC+AGG | - | chr1.2:62389627-62389646 | None:intergenic | 35.0% |
| ! | ATCGCACTGATGAAACAAAA+TGG | - | chr1.2:62390207-62390226 | None:intergenic | 35.0% |
| ! | ATTGTTTCTTCGCAGTTTCA+AGG | + | chr1.2:62388949-62388968 | MS.gene07544:intron | 35.0% |
| ! | CTCGTGATCGTGTATTATTT+TGG | + | chr1.2:62388361-62388380 | MS.gene07544:intron | 35.0% |
| ! | TAAACTGTTACTTGCATTGC+AGG | + | chr1.2:62390782-62390801 | MS.gene07544:intron | 35.0% |
| ! | TGATGAACTTCCGACTTTTT+AGG | - | chr1.2:62389813-62389832 | None:intergenic | 35.0% |
| ! | TGATGATGTCGTTCATATAG+CGG | + | chr1.2:62389385-62389404 | MS.gene07544:CDS | 35.0% |
| !! | ACAAATAATAAAAGTGCCCC+TGG | - | chr1.2:62388110-62388129 | None:intergenic | 35.0% |
| !! | GTCAGAAGTTTTGTCAATCA+TGG | - | chr1.2:62390557-62390576 | None:intergenic | 35.0% |
| !! | TGAGCTTGTTTTCAATGACT+AGG | + | chr1.2:62389508-62389527 | MS.gene07544:intron | 35.0% |
| AGGTAAGTAAAGTCCGATCA+AGG | + | chr1.2:62388726-62388745 | MS.gene07544:intron | 40.0% | |
| AGTCGACAAGATGGTCAAAA+AGG | + | chr1.2:62389197-62389216 | MS.gene07544:CDS | 40.0% | |
| ATATCAAGTCATCACCTGCT+AGG | + | chr1.2:62387832-62387851 | MS.gene07544:CDS | 40.0% | |
| ATCGGACTTTACTTACCTCT+CGG | - | chr1.2:62388724-62388743 | None:intergenic | 40.0% | |
| ATTGTACATACTTCTCAGGG+TGG | - | chr1.2:62389623-62389642 | None:intergenic | 40.0% | |
| CCATTCTTCGACATCCATAA+AGG | - | chr1.2:62388505-62388524 | None:intergenic | 40.0% | |
| CCTTTATGGATGTCGAAGAA+TGG | + | chr1.2:62388502-62388521 | MS.gene07544:CDS | 40.0% | |
| CGGTTAAGGAGGATAAATGT+TGG | + | chr1.2:62391391-62391410 | MS.gene07544:CDS | 40.0% | |
| CTATTGCACCAAACTCTAGA+AGG | - | chr1.2:62391072-62391091 | None:intergenic | 40.0% | |
| GACAGAAATTTGAGTGGTGA+AGG | - | chr1.2:62388562-62388581 | None:intergenic | 40.0% | |
| GCTTACATTTGAGCAGGTTA+AGG | + | chr1.2:62389119-62389138 | MS.gene07544:intron | 40.0% | |
| GGTAAGGAGACTTTCTTACA+AGG | + | chr1.2:62391335-62391354 | MS.gene07544:intron | 40.0% | |
| TATCAAGTCATCACCTGCTA+GGG | + | chr1.2:62387833-62387852 | MS.gene07544:CDS | 40.0% | |
| TCATACTCAGCAACTATGTC+GGG | - | chr1.2:62389558-62389577 | None:intergenic | 40.0% | |
| TGTCATGGTTCCTTTCTCTT+GGG | - | chr1.2:62388688-62388707 | None:intergenic | 40.0% | |
| TTGTCATGGTTCCTTTCTCT+TGG | - | chr1.2:62388689-62388708 | None:intergenic | 40.0% | |
| TTGTGTCTGGTACATGATTC+AGG | + | chr1.2:62390177-62390196 | MS.gene07544:CDS | 40.0% | |
| TTGTTTAGTAGAAGCAGTGC+AGG | + | chr1.2:62388416-62388435 | MS.gene07544:intron | 40.0% | |
| ! | ATACTTTTCGTTGTGCTCAC+AGG | + | chr1.2:62389953-62389972 | MS.gene07544:intron | 40.0% |
| ! | ATGATGGAAATGTCGACGAA+TGG | + | chr1.2:62389345-62389364 | MS.gene07544:CDS | 40.0% |
| ! | ATTGATGGTAAAGGCTGTGA+TGG | + | chr1.2:62389994-62390013 | MS.gene07544:CDS | 40.0% |
| ! | CATCTGGGGTTGTTAAATAG+CGG | + | chr1.2:62390457-62390476 | MS.gene07544:intron | 40.0% |
| !! | GCTTGTTTTCAATGACTAGG+TGG | + | chr1.2:62389511-62389530 | MS.gene07544:intron | 40.0% |
| !!! | GACTTTTTAGGATCAAGTGC+TGG | - | chr1.2:62389801-62389820 | None:intergenic | 40.0% |
| !!! | TGTTTTGAAGCAGACGGTTT+TGG | + | chr1.2:62388043-62388062 | MS.gene07544:intron | 40.0% |
| AGAAAGAGGGTCATGATCCA+TGG | - | chr1.2:62389275-62389294 | None:intergenic | 45.0% | |
| AGTCTCGAGTACTTCCAGTT+TGG | + | chr1.2:62388471-62388490 | MS.gene07544:CDS | 45.0% | |
| ATCAAATTACCGCACGTGGT+AGG | + | chr1.2:62389832-62389851 | MS.gene07544:CDS | 45.0% | |
| ATCGCAAACAAGCTGGTTGA+TGG | - | chr1.2:62389150-62389169 | None:intergenic | 45.0% | |
| ATTATTTACCCGGTGCAAGG+AGG | - | chr1.2:62390033-62390052 | None:intergenic | 45.0% | |
| CAAAAAACGTTGGGTCAAGG+CGG | + | chr1.2:62391371-62391390 | MS.gene07544:CDS | 45.0% | |
| CATATAGCGGTAGTCGATCA+AGG | + | chr1.2:62389398-62389417 | MS.gene07544:CDS | 45.0% | |
| CATCATCAAATTACCGCACG+TGG | + | chr1.2:62389828-62389847 | MS.gene07544:CDS | 45.0% | |
| CGTCGACATTTCCATCATAG+TGG | - | chr1.2:62389343-62389362 | None:intergenic | 45.0% | |
| GCAGGTGATGACTTGATATC+TGG | - | chr1.2:62387831-62387850 | None:intergenic | 45.0% | |
| GCAGGTTTCAGATTCATCTC+AGG | + | chr1.2:62390800-62390819 | MS.gene07544:intron | 45.0% | |
| GGGCAAACTTCAGATTGTCA+TGG | - | chr1.2:62388703-62388722 | None:intergenic | 45.0% | |
| TAAAGGTCTCAGCTCCAAAC+TGG | - | chr1.2:62388488-62388507 | None:intergenic | 45.0% | |
| TCGGACTTTACTTACCTCTC+GGG | - | chr1.2:62388723-62388742 | None:intergenic | 45.0% | |
| TTATCTGTGCCTCCAAGAGT+GGG | - | chr1.2:62390662-62390681 | None:intergenic | 45.0% | |
| ! | ATCAACCAGCTTGTTTGCGA+TGG | + | chr1.2:62389149-62389168 | MS.gene07544:CDS | 45.0% |
| ! | ATGTCCTGCGACTCTGATTT+TGG | + | chr1.2:62388863-62388882 | MS.gene07544:intron | 45.0% |
| ! | GGTGGAAGTTTTCTACTCCT+AGG | - | chr1.2:62389605-62389624 | None:intergenic | 45.0% |
| ! | GTGACGCTTTTCCACTATGA+TGG | + | chr1.2:62389329-62389348 | MS.gene07544:CDS | 45.0% |
| ! | GTTTGGAGCTGAGACCTTTA+TGG | + | chr1.2:62388488-62388507 | MS.gene07544:CDS | 45.0% |
| !! | TTCCTGCACCTTCTAGAGTT+TGG | + | chr1.2:62391061-62391080 | MS.gene07544:intron | 45.0% |
| !!! | TATTATTTTGGAGGGGGTGC+AGG | + | chr1.2:62391314-62391333 | MS.gene07544:intron | 45.0% |
| AAATTACCGCACGTGGTAGG+AGG | + | chr1.2:62389835-62389854 | MS.gene07544:CDS | 50.0% | |
| AACGACTTGATCCATGCGTG+GGG | + | chr1.2:62390285-62390304 | MS.gene07544:CDS | 50.0% | |
| AACTGCCATCGCAAACAAGC+TGG | - | chr1.2:62389157-62389176 | None:intergenic | 50.0% | |
| AAGAGGTTACGTACCCTAGC+AGG | - | chr1.2:62387849-62387868 | None:intergenic | 50.0% | |
| AGAACGACTTGATCCATGCG+TGG | + | chr1.2:62390283-62390302 | MS.gene07544:intron | 50.0% | |
| CACGCAGCTCTTGAGAAAAC+AGG | - | chr1.2:62390154-62390173 | None:intergenic | 50.0% | |
| CACTACAATCGTCCCACTCT+TGG | + | chr1.2:62390647-62390666 | MS.gene07544:CDS | 50.0% | |
| CGGTAGTCGATCAAGGCAAA+TGG | + | chr1.2:62389405-62389424 | MS.gene07544:CDS | 50.0% | |
| CTAAGCACAAGCCACCCAAA+AGG | - | chr1.2:62391016-62391035 | None:intergenic | 50.0% | |
| CTTCTTTGGTCGTAACCCTC+CGG | + | chr1.2:62388660-62388679 | MS.gene07544:intron | 50.0% | |
| GAACGACTTGATCCATGCGT+GGG | + | chr1.2:62390284-62390303 | MS.gene07544:intron | 50.0% | |
| GGTAACGCTTCACTTCCACT+AGG | - | chr1.2:62388442-62388461 | None:intergenic | 50.0% | |
| GGTTCCTTTCTCTTGGGAAC+CGG | - | chr1.2:62388682-62388701 | None:intergenic | 50.0% | |
| GTACTCGAGACTATACCCTG+AGG | - | chr1.2:62388463-62388482 | None:intergenic | 50.0% | |
| GTTATCTGTGCCTCCAAGAG+TGG | - | chr1.2:62390663-62390682 | None:intergenic | 50.0% | |
| TACAATCGTCCCACTCTTGG+AGG | + | chr1.2:62390650-62390669 | MS.gene07544:CDS | 50.0% | |
| TGGGGACTAGATATGCAGCT+TGG | + | chr1.2:62390303-62390322 | MS.gene07544:CDS | 50.0% | |
| ! | AGCTTGTTTGCGATGGCAGT+TGG | + | chr1.2:62389156-62389175 | MS.gene07544:CDS | 50.0% |
| ! | CAATCTGAAGTTTGCCCGAG+AGG | + | chr1.2:62388706-62388725 | MS.gene07544:intron | 50.0% |
| ! | CACCAAACTCTAGAAGGTGC+AGG | - | chr1.2:62391066-62391085 | None:intergenic | 50.0% |
| ! | CTGTTTTCTCAAGAGCTGCG+TGG | + | chr1.2:62390152-62390171 | MS.gene07544:CDS | 50.0% |
| ! | CTTTTCGTTGTGCTCACAGG+AGG | + | chr1.2:62389956-62389975 | MS.gene07544:intron | 50.0% |
| ! | GGAAGTGAAGCGTTACCTCA+GGG | + | chr1.2:62388445-62388464 | MS.gene07544:CDS | 50.0% |
| ! | GTAGGAGGTCAAAAGTGCAC+AGG | + | chr1.2:62389850-62389869 | MS.gene07544:CDS | 50.0% |
| ! | TGGAAGTGAAGCGTTACCTC+AGG | + | chr1.2:62388444-62388463 | MS.gene07544:CDS | 50.0% |
| ! | TTTTGACCTCCTACCACGTG+CGG | - | chr1.2:62389844-62389863 | None:intergenic | 50.0% |
| !! | CTTTTGGGTGGCTTGTGCTT+AGG | + | chr1.2:62391014-62391033 | MS.gene07544:intron | 50.0% |
| !! | TTCCTTTGGGATGAGGACCT+AGG | + | chr1.2:62389585-62389604 | MS.gene07544:CDS | 50.0% |
| ACGTTGGGTCAAGGCGGTTA+AGG | + | chr1.2:62391377-62391396 | MS.gene07544:CDS | 55.0% | |
| CCTTTCTCTTGGGAACCGGA+GGG | - | chr1.2:62388678-62388697 | None:intergenic | 55.0% | |
| CTCCTAGGTCCTCATCCCAA+AGG | - | chr1.2:62389590-62389609 | None:intergenic | 55.0% | |
| GCAGCTTGGCTACTGTTCTC+AGG | + | chr1.2:62390317-62390336 | MS.gene07544:CDS | 55.0% | |
| GCATATCTAGTCCCCACGCA+TGG | - | chr1.2:62390299-62390318 | None:intergenic | 55.0% | |
| TAGAAGCAGTGCAGGCCTAG+TGG | + | chr1.2:62388424-62388443 | MS.gene07544:intron | 55.0% | |
| TCCTTTCTCTTGGGAACCGG+AGG | - | chr1.2:62388679-62388698 | None:intergenic | 55.0% | |
| TGCGCCAAAATCAGAGTCGC+AGG | - | chr1.2:62388870-62388889 | None:intergenic | 55.0% | |
| TTGGGTCAAGGCGGTTAAGG+AGG | + | chr1.2:62391380-62391399 | MS.gene07544:CDS | 55.0% | |
| !! | TTTTGGAGGGGGTGCAGGTA+AGG | + | chr1.2:62391319-62391338 | MS.gene07544:intron | 55.0% |
| AGCACAGCTCCTCCTTGCAC+CGG | + | chr1.2:62390021-62390040 | MS.gene07544:CDS | 60.0% | |
| CCCTCCGGTTCCCAAGAGAA+AGG | + | chr1.2:62388675-62388694 | MS.gene07544:intron | 60.0% | |
| GAGCTGCGTGGCGTTGTGTC+TGG | + | chr1.2:62390164-62390183 | MS.gene07544:CDS | 65.0% | |
| GCACAGCTCCTCCTTGCACC+GGG | + | chr1.2:62390022-62390041 | MS.gene07544:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 62387825 | 62391431 | 62387825 | ID=MS.gene07544 |
| chr1.2 | mRNA | 62387825 | 62391431 | 62387825 | ID=MS.gene07544.t1;Parent=MS.gene07544 |
| chr1.2 | exon | 62387825 | 62387854 | 62387825 | ID=MS.gene07544.t1.exon1;Parent=MS.gene07544.t1 |
| chr1.2 | CDS | 62387825 | 62387854 | 62387825 | ID=cds.MS.gene07544.t1;Parent=MS.gene07544.t1 |
| chr1.2 | exon | 62388056 | 62388175 | 62388056 | ID=MS.gene07544.t1.exon2;Parent=MS.gene07544.t1 |
| chr1.2 | CDS | 62388056 | 62388175 | 62388056 | ID=cds.MS.gene07544.t1;Parent=MS.gene07544.t1 |
| chr1.2 | exon | 62388270 | 62388329 | 62388270 | ID=MS.gene07544.t1.exon3;Parent=MS.gene07544.t1 |
| chr1.2 | CDS | 62388270 | 62388329 | 62388270 | ID=cds.MS.gene07544.t1;Parent=MS.gene07544.t1 |
| chr1.2 | exon | 62388427 | 62388543 | 62388427 | ID=MS.gene07544.t1.exon4;Parent=MS.gene07544.t1 |
| chr1.2 | CDS | 62388427 | 62388543 | 62388427 | ID=cds.MS.gene07544.t1;Parent=MS.gene07544.t1 |
| chr1.2 | exon | 62389135 | 62389218 | 62389135 | ID=MS.gene07544.t1.exon5;Parent=MS.gene07544.t1 |
| chr1.2 | CDS | 62389135 | 62389218 | 62389135 | ID=cds.MS.gene07544.t1;Parent=MS.gene07544.t1 |
| chr1.2 | exon | 62389308 | 62389426 | 62389308 | ID=MS.gene07544.t1.exon6;Parent=MS.gene07544.t1 |
| chr1.2 | CDS | 62389308 | 62389426 | 62389308 | ID=cds.MS.gene07544.t1;Parent=MS.gene07544.t1 |
| chr1.2 | exon | 62389530 | 62389631 | 62389530 | ID=MS.gene07544.t1.exon7;Parent=MS.gene07544.t1 |
| chr1.2 | CDS | 62389530 | 62389631 | 62389530 | ID=cds.MS.gene07544.t1;Parent=MS.gene07544.t1 |
| chr1.2 | exon | 62389755 | 62389871 | 62389755 | ID=MS.gene07544.t1.exon8;Parent=MS.gene07544.t1 |
| chr1.2 | CDS | 62389755 | 62389871 | 62389755 | ID=cds.MS.gene07544.t1;Parent=MS.gene07544.t1 |
| chr1.2 | exon | 62389975 | 62390043 | 62389975 | ID=MS.gene07544.t1.exon9;Parent=MS.gene07544.t1 |
| chr1.2 | CDS | 62389975 | 62390043 | 62389975 | ID=cds.MS.gene07544.t1;Parent=MS.gene07544.t1 |
| chr1.2 | exon | 62390132 | 62390198 | 62390132 | ID=MS.gene07544.t1.exon10;Parent=MS.gene07544.t1 |
| chr1.2 | CDS | 62390132 | 62390198 | 62390132 | ID=cds.MS.gene07544.t1;Parent=MS.gene07544.t1 |
| chr1.2 | exon | 62390285 | 62390338 | 62390285 | ID=MS.gene07544.t1.exon11;Parent=MS.gene07544.t1 |
| chr1.2 | CDS | 62390285 | 62390338 | 62390285 | ID=cds.MS.gene07544.t1;Parent=MS.gene07544.t1 |
| chr1.2 | exon | 62390599 | 62390691 | 62390599 | ID=MS.gene07544.t1.exon12;Parent=MS.gene07544.t1 |
| chr1.2 | CDS | 62390599 | 62390691 | 62390599 | ID=cds.MS.gene07544.t1;Parent=MS.gene07544.t1 |
| chr1.2 | exon | 62390804 | 62390842 | 62390804 | ID=MS.gene07544.t1.exon13;Parent=MS.gene07544.t1 |
| chr1.2 | CDS | 62390804 | 62390842 | 62390804 | ID=cds.MS.gene07544.t1;Parent=MS.gene07544.t1 |
| chr1.2 | exon | 62391336 | 62391431 | 62391336 | ID=MS.gene07544.t1.exon14;Parent=MS.gene07544.t1 |
| chr1.2 | CDS | 62391336 | 62391431 | 62391336 | ID=cds.MS.gene07544.t1;Parent=MS.gene07544.t1 |
| Gene Sequence |
| Protein sequence |