AlfalfaGEDB | MS.gene07811

M. sativa cultivar XinJiangDaYe / MS.gene07811

KEGG: -
GO: GO:0000166 GO:0003674 GO:0005488 GO:0017076 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0036094 GO:0043167 GO:0043168 GO:0043531 GO:0097159 GO:0097367 GO:1901265 GO:1901363
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene07811.t1	XP_003627154.1	91.9	1215	95	1	1	1215	159	1370	0.00E+00	2183.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene07811.t1	Q9SZ66	28.3	1021	605	27	2	919	161	1157	2.3e-83	312.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene07811.t1	G7LI80	91.9	1215	95	1	1	1215	159	1370	0.0e+00	2183.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene052679	MS.gene07811	0.924399	7.42E-90	-1.69E-46
MS.gene052680	MS.gene07811	0.923639	2.04E-89	-1.69E-46
MS.gene052681	MS.gene07811	0.97234	1.32E-134	-1.69E-46
MS.gene052682	MS.gene07811	0.901819	1.82E-78	-1.69E-46
MS.gene054576	MS.gene07811	0.835414	1.70E-56	-1.69E-46
MS.gene054892	MS.gene07811	0.817645	2.96E-52	-1.69E-46
MS.gene054893	MS.gene07811	0.810225	1.28E-50	-1.69E-46
MS.gene058289	MS.gene07811	0.847543	1.08E-59	-1.69E-46
MS.gene059774	MS.gene07811	0.810103	1.36E-50	-1.69E-46
MS.gene060697	MS.gene07811	0.809018	2.33E-50	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 0 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
55985	gene	4667	12077	4667	ID=MS.gene07811
55985	mRNA	4667	12077	4667	ID=MS.gene07811.t1;Parent=MS.gene07811
55985	exon	10997	12077	10997	ID=MS.gene07811.t1.exon1;Parent=MS.gene07811.t1
55985	CDS	10997	12077	10997	ID=cds.MS.gene07811.t1;Parent=MS.gene07811.t1
55985	exon	10613	10915	10613	ID=MS.gene07811.t1.exon2;Parent=MS.gene07811.t1
55985	CDS	10613	10915	10613	ID=cds.MS.gene07811.t1;Parent=MS.gene07811.t1
55985	exon	8830	10393	8830	ID=MS.gene07811.t1.exon3;Parent=MS.gene07811.t1
55985	CDS	8830	10393	8830	ID=cds.MS.gene07811.t1;Parent=MS.gene07811.t1
55985	exon	8195	8418	8195	ID=MS.gene07811.t1.exon4;Parent=MS.gene07811.t1
55985	CDS	8195	8418	8195	ID=cds.MS.gene07811.t1;Parent=MS.gene07811.t1
55985	exon	7037	7123	7037	ID=MS.gene07811.t1.exon5;Parent=MS.gene07811.t1
55985	CDS	7037	7123	7037	ID=cds.MS.gene07811.t1;Parent=MS.gene07811.t1
55985	exon	6555	6938	6555	ID=MS.gene07811.t1.exon6;Parent=MS.gene07811.t1
55985	CDS	6555	6938	6555	ID=cds.MS.gene07811.t1;Parent=MS.gene07811.t1
55985	exon	4667	4714	4667	ID=MS.gene07811.t1.exon7;Parent=MS.gene07811.t1
55985	CDS	4667	4714	4667	ID=cds.MS.gene07811.t1;Parent=MS.gene07811.t1

Gene Sequence

>MS.gene07811

GGATGATTCTCAAGTCATCGATAAAATTGTGGAAGATGTTTTGCAAAAGTTGTCCCTCATGTATCCTAATGAACTCAAAGACCTTGTTAAAGTTGATGAGAACAGTGAACATATTGAATTATTACTGAAAACAATACCAAGAATTGGAATTTGGGGCATGGGTGGAATAGGAAAGACAACCATAGCAAAACAGATGTTTGCCAAGAACTTTGCCCATTATGACAATGTATGCTTCTTGGAAAAGGTAAGTGAAGACTCAGAAAAGTTGGGACCAATATATGTTCGTAATCAGCTTCTTCGTGAGCTACTGAAGCGAGAAATTACAACATCTGATGTCCACGGACTTCACACGTTCATCAAGAGGAGGCTCTTTCGCAAAAAAGTTTTCATTGTACTTGATGATGTTGATAATGCTACACAGTTAGATGATTTGTGTCGAGTACTTGGTGACCTTGGACCTAACAGTAGACTCATTATCACAACGCGAGACAGGCATACTCTTAGTGGAAAAGTTGATGAAATATATGAGGTCAAAACATGGAGGCTTAAAGACTCTCTAAAGCTTTTTAGCCTAAGAGCCTTCAAGCAAGACCATCCTTTAAAGGGTTACGAGCATTTCTCGGAAAGGGCAGTTGAATGTGCAGGAGGTGTTCCACTAGCTTTACAAGTTTTGGGTTCACATTTTCATTCCAGAAAACCAGAATTCTGGGAATCTGAGTTGAATTTGCATGAGAACAAAGGAGAATCCTTGCCCGATATTCAAAAAGTGCTAAGAGCGAGTTATAATGGATTATCATGGCGACAGAAGGAAATGTTTCTAGACATTGCATTCTTTTTCAAAGGTGAAAACAAAGACATCGTCACAAGAATACTAGATGCCTTTGGTTTCAATGCAACTAGTGGGATAGAAATCCTCGAAGATAAAACTCTTATAACCATTTCCAACAACAGTAGAATACAAATGCACGACTTACTACAAAAGATGGCCTTTGATATAGTTCGAGAAGAATATAATGACCGAGGAAAGCGTAGCCGACTGAGGGATGCTAAAGACATTTGTGATGTACTTGGAAATAACAAGGTATGGAGTATTAAATTTTTCTATATAAAAAATTACTGTTGATTTGTTGTGGTAATAATGTAGTGACTTTCAATTTGTCAGGGGAATGATGCAATTGAAGGAATAATATTTGATTTGTCTCAAAAACTAGATATACATGTTCAAGCTGACACATTCAAATTGATGACTAAATTAAGATTTCTTAAATTCCACATACCCAAGGGTAAGAAGAGATTGGGCACTGTGCATCTTCCTGAAAATATTATGCCATTTTTTGACAAACTGACATACCTTGAGTGGAATGGGTATCCCCTGAAGTCTCTTCCAGAGCCTTTTCATGCTGAGCAGCTGATTAAGATTTCTTTGCCGCACAGCAACATTGAACATCTTTGGTACGGAATGCAGGTGCGTGTGTGTACTTAAACCAATTCATTTGAATTATGGAATTCTTTCTTAGTTTTTTATACAAATGAAAATTAGAAAAATTATTAAATAATGCGAGTCACATGCAGTTGTGTTTTCTTCGATTGCATGGTGTGAAAATGAATGGATGCTTGACAGACCAATTTAAATAAAATATGAGAATATTAATAACCTTTGACGTGTTCTTTTGAATTGGTACAGGAACTTGTGAATCTAGAGGCCATCGACCTAAGTGAATGCAAACAGTTACGTCACCTCCCTGATTTGTCTGGGGCGTTGAAACTCAAACAGTTGCGCCTTTCCGGTTGTGAAGAATTATGTGAACTTCAACCTTCTGCTTTTTCTAAGGACACACTTGATACTTTGCTACTGGATAGGTGCATAAAACTGGAAAGTCTTATGGGTGAGAAGCATTTAACATCTCTAAAATACTTCAGTGTCAAAGGCTGCAAGAGTCTGAAGGAATTTTCATTGTCCTCAGATTCAATAAATAGGTTGGATTTAAGCAAAACCGGAATCAAAATATTGCACCCCTCAATCGGTGACATGAACAACCTTATTTGGTTGAATCTAGAAGATTTAAATCTAACGAATCTACCGATTGAATTGTCTCGCTTGAGATCACTTACTGAACTTCGGGTTTCTAAGTGCAGTGTAGTAACTAAATCCAATTTAGAAGCCCTTTTTGACGGTCTGACATTATTGAGATTACTGCACTTGAAAGACTGTTGTAACTTGATTGAACTCCCTGCAAACATTAGTTCGTTAGAATCATTGCATGAATTAAGACTGGATGGAAGCAGTGTGGAGGAGTTGCCTGCTAGCATCAAGTACCTCTCAGAGCTAGAAGTTCAGTCTTTAGACAATTGCAGTAAGCTTCGTCGTCTGCCAGAACTTCCTTTAAGCATCAAAGAGTTTCAGGCCGACAACTGCACCTCCTTGATAACAGTATCCACTTTGAAGACCTTTTCAATAAACATGATTGGCCAAAAAAAATACATTTCCTTTAAGAATAGCATTATGCTGGAATTGGATGGACCCTCGCTTGACCGCATTACGGAAGATGCCATCTTAACAATGAAAAGTGCTGCCTTTCACAATGTATTAGTCAGAAAGTACAGATTCCAAACCCACAGCTTCAATTATAACAGAGCTGAGGTTTGTCTGCCAGGGCGCAGAGTTCCAAGAGAGTTCAAACACCGATCAACCACATCTTCCTCCATAACTATCAACATTTCCAACTCATTGGGCTTCATTTTTGCAGTTGTTGTTTCTCCATCTAAGAGAACACGACAGCATGGATACTTTGTTGGAATGCGATGTCAATGCTATACGGAAGATGGAAGGAGGGAGGTGGGATATAAGTCTAAGTGGGATCATAAACCGATTACAAATTTGAACATGGATCATGTTTTTGTATGGTATGATCCATACCATTATGACAGCATACTCAGCAGTATTGAAAGAAAGATTTCTTTTAAATTCTACATTACAACTTATACAAGCAGCGGGAGAGAACTTGATGGCCTTCTAAGTATCAAAGAGTGTGGAGTTTGTCCAATTTACTACTCTGAAAGTCGGAGGGTTTTAGGCACAGGGAATTTAGACAAGAAATTAGAATTAGAGTTGTATGAGGAAATTCAATTTGAATCAAGATCAGGTGAAGGCTATGATGAGGGAGATGATGAGAAGGAAGGTACTGGCATACAGAACCAACAATCGGACTTGAATGAAAATTTTCACAGTTCATATGAAGGTTTAATTGGTACGAAACTCTTTGCTCTCTTTCACAATTGTTTTATGATATCTTTCTTATGTTGTTAATCAATCCCTCCGTACAATATAGTTTGAATAGCATTTAGAATATAGTCCGTATTTCTTCCCTTTCATATTCAATTTTAGAGAAACCAGATGAAACTAACAATATTTTATAAAAATTTATATATCTAAACATTATATAGACTGCTTTATTTCATTTTCCTTCATCGTCAAATTTTACAATCGTCTCAGAGAGTAGAGTTGCCTTTAAGTCTATTATTATGCACATACCCACACCCTTATTAATTGCAATTGCATGCTTTCTTTTTCACTGAATTGCAATTGCCTACTTGTAACTTTTAAATCTTTAAGATAGTCGATTTTTTCTTTGTCAACCTCACCATTTCTTTTTCTTTAGCCTCTAATGATACTCAGGTACATGAAAATCCTCAAGAGAAAGAAACTTTGGATGATGATGATAATTCCAAAGAAATTATGAAATTTAAGATTGTTCATGAGAGTTCTGCGATGTCTGGAGACGAAACTGAAACTTCCTCCATCAAACAAGAACAATTCGAGAAGGAGAAGGATTCTACTGGAGGAGGTTCTGATGTAGATTTGTCTTTCAATAAAGCAGCTAAGGCAATACTTGCACCTTTGACCTTTTTATTCCATCTAAATATATCACACTCATCCTCTTTCTCTTTTCAAATAGTGTTTTAGTAATGTTTCTAAGCAGCGGAAAATGAAAGCTCAGCATAAAACCCATTTTATAGAGCCTAATGAAGAACGTACAGTGGCACGCGCGTGCGCGAACACACACACATACAAACACTCACACTACACCCACATACACATATGTTATTTTCCTTACACTCTCCCCTCAAATAAAGAAATTTTGTTTTCGATCATCGTTTTTTTATAACCTTGATCATTGTTGTTTTGTTTTAATCTTTGTAATATATTTTTATGTTGCATTCATCTTTATGAGAGGAACAACTTACTTTGAAAGGGTGTGAAAAAAAAATCTGTTAGATGAGCAATTAGAACAATATTATAGCATGTCCTAAAATTAATACTGTTCATATATTACAAGTATTAAAACCAACATGAACAAATATTACATATACTAAAATCCAAACCAACTGTTTGGACTCAATTTGTTAATGAGTGTTATGTTAATGTCGAGTCAATCAGAAGTATTCCATTTCTATTGGAAGTACCTAAGTTCGATCCATGGTTGGAACTTGGAACAATGTTTCATCATACTTTACTTATTAACAAAATTCATGAACAACATAAGAAAGCAAACAATATCAACAGAATTGAGAGAATAAAATGGATTGCAAGAGACTTTGAAAGTTATTCTCATTAATTCAAATTGAACGGAGGTTACAAAATCAGTTACAAGGAGATAGTGGACACACCAAATATGTTGAGTAACCTCTTTGGCCCATCACAATGGGCCTTTATCCGGATGGTACATACCTCGTTGCCGAATTCCGAATTATTAGAATAGATTTCCTCTGTGAATTAGAGGTATAAGACTAAAATCAATATCAAAACCAAAATTTTTTCTGGGTTAGGGGCGAAAACAATTTTTTATAGCTATAAGAGCAAAAACAGAGATATTTTTGCATGTGAAAAAAAAAAATTGAATTTATTTTTTTATTTCCTTTTAACTTGTCATTTACTTTTCTCACCTTTCAACAGAGACAAAAGTTTTCCAGTGATGATGATTTACACCCTTCTATTTCTCCGACAAGATTAAATTCAACAAACAAGTCGAAGACAAATGAGGTTTTTCTTTGTTCCTTAGCGACATGAAACAACCTTCATTCGTAATGCAAACTACTTTATTCCTTAATAATACTTATGGTTGATTGTTTCATTACCAGGAAACTAAGAATCTTCAAGAGTCACCACCACCATTTGTGAAGAATCTACAGATTCCATCTTATTCTTATACTAACAAACTAAATCCAAACACTTCAATGGCTGCTGAGAGTTCTTCAAGTAAACCTTCGAATGATTCAAAATATTCTCCTATTGATTATTCTGAATATAAGAAAATCCTTGAAGAAGACCCTTTGGCAATCATGGAAAAACTCTTATCTGGTGAACTTGGTCATTCTTCACAGGCTTCTCAATCTACACAACAAGCAGAAGCTACTGAAACTCGGAGTGAGTCAATCAAGATGCTGCTTGATGAATTAAGGGAGTTGGCATTTTCAAGAAACCTATTGAAACATTTACCCAATGATGTGACTCTTGGAGAAGAGGTGAAAGCTTTATTAGTTAAACTCAATTATAGAGCTAATGAGCTTTCTGAGAAACAAAGTTCTGGTATTACTGATTTCACCAAAATCTTTATAGATGCCACACTGAATATTGATGAAGGAAAACTGAGCAATGTTACTCTTCAACATCTTAATGTGGATCATGAAGATTCAATATCCAAGCTTCAAGCATCCAAAGACAAGATAATGAAGTTTGACAAGTCCATCAGTACCGCTGAGGATAAGATCAAGGCCAGGGATGTTGAAATTGAAGATATCAAAGCACAGATTTGTTTGCTCGAGGAGAAAGCACGTAAGGTTCAACAAGAGAAGTCACAGTTAGAGGATGCTTGCTCAAAATGTAAGGAAAAGAGAACTGAAATTGTGGAAGAAGCTAAAAATGTAGCCTCTATGACCATACAAACCCGCGAGAAGATTGATAATGTAAACAAGAAGAAGCGGGAGTTGGATTCAAATTATGACACGCTTGAAGGAAATTATGCCATAATGAGACTGGCACCTCCATTTTAGAATTTGCCTTATTATTATGCTTGTTATATTTCCTTTATTTTTGAACAATTTATAAACCATCAAAATTTAGTTCACTGTATATCACTCTCTCGTACTTAATCTTTAAATTATATAAAAATAATAATAATGATAAAAAAAAAATTCTCAAAAAGTTTCTCCTTTTCTTGCGAATTTCGTCCAGAAAATGCATCCTATATTGAGAACATTTTCAAAGACTTTGTCATGAGTAGAAAAGTGGTTGAGGATCACATGAATGCTTTACAGCAAAGAGAAAAGCTTATGCAGCGAGTGAGAGATGCTAAGAAACAGAAGGAATCAAAAGAGAAAGAAAAGGTGGATGAAAAAATATTAGAGTTCTTGTTGAGCAAAAGAAAAGTACTGAGTTGGAAAAAAACAAAGTTGAGAACATAGAAGATACTGCTAAGTACTCCCTCCGGTCCTAGTTACAAGAGACAATTTACTTTTCAGATACATTAAATAATTTATGTATTTAGTTTAGGTTCTTGACTAGGTACATACATTATTTAATGTATCTAAAAAGTCAACTTTCTCTTGTAAATGGGACCGGAGGGAGTATATGGTAATTGAAAGAAAAAAAGTCGATGTCGAGTATTAAGAATTCTAAATCTTCATATGCTGCTTTTTTGCAGACAACTATGGAAGTATAGAATAGCTGAGAAGTGTTGATAGCATGCATGAAGCTTAAATTCTGATTGAAGGCATGTATTTATTTGTAGACCAATTATGAAACTAAGTGTCATTTTTGTGAAAAGTTATACTACATTAATAATCAAAACCACAATACATATATCTTCATCACAAATTTGAATGCTAATCTTATATCTATTCATCCATGAATATAAAACTTTTTTTATTTTCTTTTTTACGGTACAAATTAGTATGACCCATGAATATAATATTAACTTTTAACATATATGAAATTCATCAATTAGTCTCTAAATTTTTTAAAAAGTCATCATTATAATTCTTAACATCTTAATAACAAAAGACTAAATTAATGAATTTTATATAGTTTGAAGACTACTTGATATATTTATGTAGATTAGGGATTAAATTGGAGAGAAGTTGATAATTTAGGGAGTAGTTTGATGGTTTATTCTAATTAAATTAATCTCTAAGTTCTTAACTATTCTTATAGTTTCACTAATTTTTCATTCTTGTATACTTTAAATTGATATAAAATAGTCTTTATAACCGTTAATTTTTAAATAATTTGCTTTCATATTAACAATGCTAATAATATTTTGTTAAGTTTTTATATATCAACAAAATAAATTTAAATAAACAAAAGATGTTGATCTACTCCATAAGTGATGTGTCTGGTATGAACATTGCATAA

Protein sequence

>MS.gene07811.t1

GUFSSHRUNCGRCFAKVVPHVSUUTQRPCUSUUEQUTYUIITENNTKNWNLGHGWNRKDNHSKTDVCQELCPLUQCMLLGKGKURLRKVGTNICSUSASSUATEARNYNIUCPRTSHVHQEEALSQKSFHCTUUCUUCYTVRUFVSSTWUPWTUQUTHYHNARQAYSUWKSUUNIUGQNMEAURLSKAFUPKSLQARPSFKGLRAFLGKGSUMCRRCSTSFTSFGFTFSFQKTRILGIUVEFAUEQRRILARYSKSAKSELUWIIMATEGNVSRHCILFQRUKQRHRHKNTRCLWFQCNUWDRNPRRUNSYNHFQQQUNTNARLTTKDGLUYSSRRIUUPRKAUPTEGCURHLUCTWKUQGEUCNURNNIUFVSKTRYTCSSUHIQIDDUIKISUIPHTQGUEEIGHCASSUKYYAIFUQTDIPUVEWVSPEVSSRAFSCUAADUDFFAAQQHUTSLVRNAGTCESRGHRPKUMQTVTSPPUFVWGVETQTVAPFRLURIMUTSTFCFFUGHTUYFATGUVHKTGKSYGUEAFNISKILQCQRLQESEGIFIVLRFNKUVGFKQNRNQNIAPLNRUHEQPYLVESRRFKSNESTDUIVSLEITYUTSGFUVQCSNUIQFRSPFURSDIIEITALERLLULDUTPCKHUFVRIIAUIKTGWKQCGGVACUHQVPLRARSSVFRQLQUASSSARTSFKHQRVSGRQLHLLDNSIHFEDLFNKHDWPKKIHFLUEUHYAGIGWTLAUPHYGRCHLNNEKCCLSQCISQKVQIPNPQLQLUQSUGLSARAQSSKRVQTPINHIFLHNYQHFQLIGLHFCSCCFSIUENTTAWILCWNAMSMLYGRWKEGGGIUVUVGSUTDYKFEHGSCFCMVUSIPLUQHTQQYUKKDFFUILHYNLYKQRERTUWPSKYQRVWSLSNLLLUKSEGFRHREFRQEIRIRVVUGNSIUIKIRURLUUGRUUEGRYWHTEPTIGLEUKFSQFIURFNCLUUYSGTUKSSRERNFGUUUUFQRNYEIUDCSUEFCDVWRRNUNFLHQTRTIREGEGFYWRRFUCRFVFQUSSUETKVFQUUUFTPFYFSDKIKFNKQVEDKUGNUESSRVTTTICEESTDSILFLYUQTKSKHFNGCUEFFKUTFEUFKIFSYULFUIUENPURRPFGNHGKTLIWUTWSFFTGFSIYTTSRSYUNSEUVNQDAAUUIKGVGIFKKPIETFTQUCDSWRRDVDLLHKUCVWYEHCI