Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08078.t1 | XP_003600465.1 | 98.1 | 364 | 3 | 1 | 1 | 360 | 1 | 364 | 8.10E-190 | 672.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08078.t1 | G7IYA2 | 98.1 | 364 | 3 | 1 | 1 | 360 | 1 | 364 | 5.8e-190 | 672.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050752 | MS.gene08078 | 0.822603 | 2.17E-53 | -1.69E-46 |
| MS.gene051343 | MS.gene08078 | 0.800879 | 1.17E-48 | -1.69E-46 |
| MS.gene054403 | MS.gene08078 | 0.821419 | 4.08E-53 | -1.69E-46 |
| MS.gene059146 | MS.gene08078 | 0.823385 | 1.43E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08078.t1 | MTR_3g061490 | 98.077 | 364 | 3 | 1 | 1 | 360 | 1 | 364 | 0.0 | 730 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08078.t1 | AT3G20920 | 68.994 | 358 | 95 | 6 | 1 | 345 | 1 | 355 | 3.09e-179 | 501 |
| MS.gene08078.t1 | AT3G20920 | 68.908 | 357 | 96 | 6 | 1 | 345 | 1 | 354 | 4.38e-179 | 501 |
Find 75 sgRNAs with CRISPR-Local
Find 336 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCCTCTTCATCTTTCTT+TGG | 0.213188 | 3.3:-49394324 | None:intergenic |
| TGCGAGAGTTGTTCAGATTT+TGG | 0.213419 | 3.3:+49394301 | MS.gene08078:CDS |
| TCTCCTAGTTTAGCCTTGTC+TGG | 0.298819 | 3.3:+49394668 | MS.gene08078:CDS |
| GTAGAGAGAGGATGAGAAAA+AGG | 0.303368 | 3.3:-49391989 | None:intergenic |
| GTAGTAAGAGGTACAATATT+TGG | 0.306952 | 3.3:+49394210 | MS.gene08078:intron |
| ATGATAAACAGTATGATTAA+TGG | 0.322992 | 3.3:+49394864 | MS.gene08078:CDS |
| ATCTCGAAACCAACTCCTTA+TGG | 0.329067 | 3.3:-49390932 | None:intergenic |
| AAAATCCTTGTCGTCCATTT+CGG | 0.335549 | 3.3:-49394348 | None:intergenic |
| TCCGGAGGTTAAAGACATTC+TGG | 0.339148 | 3.3:+49391025 | MS.gene08078:CDS |
| GCTTCCTCCGCAAGGATGTT+GGG | 0.342543 | 3.3:-49394273 | None:intergenic |
| CTTGCCCTTGCAGCTTCATC+AGG | 0.350247 | 3.3:-49394420 | None:intergenic |
| TTTAGCCTTGTCTGGGATGA+TGG | 0.378491 | 3.3:+49394676 | MS.gene08078:CDS |
| GGCGTTCTATATATTCTTGT+TGG | 0.381574 | 3.3:+49394231 | MS.gene08078:CDS |
| GCCTCACAAGGCAGCACAAC+AGG | 0.389832 | 3.3:+49394740 | MS.gene08078:CDS |
| TTAATACTTTACTCGTGTGC+TGG | 0.398269 | 3.3:+49391963 | MS.gene08078:CDS |
| TTCTTGTTGGAAAGCGGATC+TGG | 0.418629 | 3.3:+49394244 | MS.gene08078:CDS |
| CTCCTAGTTTAGCCTTGTCT+GGG | 0.426101 | 3.3:+49394669 | MS.gene08078:CDS |
| GGGACGTCGGAGGAGGGATC+TGG | 0.432011 | 3.3:-49390229 | None:intergenic |
| TGCTTCCTCCGCAAGGATGT+TGG | 0.436657 | 3.3:-49394274 | None:intergenic |
| TGTGAAGAAGGATGTGTATC+AGG | 0.438572 | 3.3:+49390887 | MS.gene08078:CDS |
| ATGAAGAGGAAAGGCCGAAA+TGG | 0.448763 | 3.3:+49394334 | MS.gene08078:CDS |
| TCAGAAACAAGCTGTGAAGA+AGG | 0.469702 | 3.3:+49390875 | MS.gene08078:intron |
| CCTAGGAGGGACGTCGGAGG+AGG | 0.470461 | 3.3:-49390236 | None:intergenic |
| TCCAGAATGTCTTTAACCTC+CGG | 0.479317 | 3.3:-49391026 | None:intergenic |
| TGAGAAAGTGAGAGACCATA+AGG | 0.479734 | 3.3:+49390917 | MS.gene08078:CDS |
| TTTCTGGCCTGTGTTAACAT+TGG | 0.480409 | 3.3:+49391899 | MS.gene08078:CDS |
| ATTAAGAGCTTGCAGCTATG+AGG | 0.484553 | 3.3:-49391945 | None:intergenic |
| TAAGGAGTTGGTTTCGAGAT+GGG | 0.487533 | 3.3:+49390935 | MS.gene08078:CDS |
| GGGAAAATTTCTAAATGAGC+AGG | 0.489313 | 3.3:-49391170 | None:intergenic |
| GGTTAAAGACATTCTGGAAT+CGG | 0.497490 | 3.3:+49391031 | MS.gene08078:CDS |
| GCCTTGTGAGGCAGCATCAG+TGG | 0.498248 | 3.3:-49394729 | None:intergenic |
| ACAAGGCAGCACAACAGGAC+CGG | 0.505921 | 3.3:+49394745 | MS.gene08078:CDS |
| TAATACTTTACTCGTGTGCT+GGG | 0.520840 | 3.3:+49391964 | MS.gene08078:CDS |
| TCCTGTTGTGCTGCCTTGTG+AGG | 0.527738 | 3.3:-49394741 | None:intergenic |
| TACTGTTCATATTACTGTTG+AGG | 0.529799 | 3.3:+49394388 | MS.gene08078:CDS |
| TCGGTTGGAGCTTCATGCTC+CGG | 0.530823 | 3.3:-49394764 | None:intergenic |
| TCATTGATGATGTTCTTGAA+TGG | 0.531192 | 3.3:+49394645 | MS.gene08078:CDS |
| AGTGAGAGACCATAAGGAGT+TGG | 0.536744 | 3.3:+49390923 | MS.gene08078:CDS |
| TCCACTGATGCTGCCTCACA+AGG | 0.554001 | 3.3:+49394728 | MS.gene08078:CDS |
| CTGATGAAGCTGCAAGGGCA+AGG | 0.555464 | 3.3:+49394421 | MS.gene08078:CDS |
| TATATATTCTTGTTGGAAAG+CGG | 0.556470 | 3.3:+49394238 | MS.gene08078:CDS |
| CTTCCTCCGCAAGGATGTTG+GGG | 0.556772 | 3.3:-49394272 | None:intergenic |
| TTGTAAAACGACATCCACTT+TGG | 0.558359 | 3.3:+49391859 | MS.gene08078:CDS |
| TTAAGAGCTTGCAGCTATGA+GGG | 0.560242 | 3.3:-49391944 | None:intergenic |
| ATTGAAAACATAGAGGATGT+AGG | 0.560982 | 3.3:+49394836 | MS.gene08078:CDS |
| AAGACATTCTGGAATCGGAC+AGG | 0.563072 | 3.3:+49391036 | MS.gene08078:CDS |
| CTTGCAGCTATGAGGGTACA+CGG | 0.568526 | 3.3:-49391937 | None:intergenic |
| GATAGGAGTGTCTGCCAAAG+TGG | 0.568616 | 3.3:-49391873 | None:intergenic |
| ATCCCAGACAAGGCTAAACT+AGG | 0.569530 | 3.3:-49394671 | None:intergenic |
| CTAGGAGGGACGTCGGAGGA+GGG | 0.570443 | 3.3:-49390235 | None:intergenic |
| TTGGCCAAAGAAAGATGAAG+AGG | 0.571861 | 3.3:+49394320 | MS.gene08078:CDS |
| ATAAGGAGTTGGTTTCGAGA+TGG | 0.575545 | 3.3:+49390934 | MS.gene08078:CDS |
| TGCACCTGATGAAGCTGCAA+GGG | 0.580240 | 3.3:+49394416 | MS.gene08078:CDS |
| CAGAATGTGACTAATGCCAC+AGG | 0.580423 | 3.3:+49394704 | MS.gene08078:CDS |
| TTTAGTTCGCTGTGATCGTG+TGG | 0.588939 | 3.3:+49391106 | MS.gene08078:CDS |
| GCAGTGTTGCTTCCTCCGCA+AGG | 0.589718 | 3.3:-49394281 | None:intergenic |
| ATGCACCTGATGAAGCTGCA+AGG | 0.597119 | 3.3:+49394415 | MS.gene08078:CDS |
| GATCTGGTGCGGAGGAGCGT+CGG | 0.599719 | 3.3:-49390213 | None:intergenic |
| AGAAGTCATTGAAAACATAG+AGG | 0.607410 | 3.3:+49394829 | MS.gene08078:CDS |
| GGAGGAGGGATCTGGTGCGG+AGG | 0.612395 | 3.3:-49390221 | None:intergenic |
| GTCGGAGGAGGGATCTGGTG+CGG | 0.613470 | 3.3:-49390224 | None:intergenic |
| GAAGAAATCATCGGGAGGCG+CGG | 0.613727 | 3.3:+49390174 | MS.gene08078:CDS |
| CAAAGAAAGATGAAGAGGAA+AGG | 0.627979 | 3.3:+49394325 | MS.gene08078:CDS |
| GAAGCTCCAACCGATAGTAA+TGG | 0.629679 | 3.3:+49394773 | MS.gene08078:CDS |
| AACCCTAGGAGGGACGTCGG+AGG | 0.635303 | 3.3:-49390239 | None:intergenic |
| CAAATAGCCAATGTTAACAC+AGG | 0.636543 | 3.3:-49391906 | None:intergenic |
| TTTGTCCATCATCCCAGACA+AGG | 0.641989 | 3.3:-49394681 | None:intergenic |
| GGCAGCATCAGTGGACCCTG+TGG | 0.656336 | 3.3:-49394720 | None:intergenic |
| ACTTACTCAACAGTAGAGAG+AGG | 0.660007 | 3.3:-49392001 | None:intergenic |
| AAAGGCCGAAATGGACGACA+AGG | 0.665317 | 3.3:+49394343 | MS.gene08078:CDS |
| TTTCCCCAACATCCTTGCGG+AGG | 0.667890 | 3.3:+49394269 | MS.gene08078:CDS |
| TTGCAGCTATGAGGGTACAC+GGG | 0.668997 | 3.3:-49391936 | None:intergenic |
| GGACAGGAGTTTAGAAACAG+AGG | 0.691778 | 3.3:+49391052 | MS.gene08078:CDS |
| AAAATGAAGAAATCATCGGG+AGG | 0.704093 | 3.3:+49390169 | None:intergenic |
| AGAATGTGACTAATGCCACA+GGG | 0.741132 | 3.3:+49394705 | MS.gene08078:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAAATATATATCCTTAT+GGG | + | chr3.3:49392049-49392068 | MS.gene08078:intron | 10.0% |
| !! | TATATAAATATATATCCTTA+TGG | + | chr3.3:49392048-49392067 | MS.gene08078:intron | 10.0% |
| !!! | AAATATAAAAAATTTGGTTT+TGG | - | chr3.3:49393591-49393610 | None:intergenic | 10.0% |
| !!! | AACCAAAAAAATATTTTTAT+AGG | - | chr3.3:49393364-49393383 | None:intergenic | 10.0% |
| !!! | ACCAAAAAAATATTTTTATA+GGG | - | chr3.3:49393363-49393382 | None:intergenic | 10.0% |
| !!! | GATTTTTTTCTTAATAATAA+CGG | + | chr3.3:49392717-49392736 | MS.gene08078:intron | 10.0% |
| !! | AACTTTATGAATGAATTTAT+AGG | + | chr3.3:49394453-49394472 | MS.gene08078:intron | 15.0% |
| !! | ATATTATTAAGGCTTAAATA+TGG | + | chr3.3:49393299-49393318 | MS.gene08078:intron | 15.0% |
| !! | ATTTAGGAATTAATATGATT+AGG | - | chr3.3:49393795-49393814 | None:intergenic | 15.0% |
| !! | CAACACAAATATTAATATTT+AGG | - | chr3.3:49392648-49392667 | None:intergenic | 15.0% |
| !! | CTAAATATTAATATTTGTGT+TGG | + | chr3.3:49392646-49392665 | MS.gene08078:intron | 15.0% |
| !! | TAAATTCATTCATAAAGTTT+AGG | - | chr3.3:49394452-49394471 | None:intergenic | 15.0% |
| !! | TATATTTATATACATAAGTG+AGG | - | chr3.3:49392040-49392059 | None:intergenic | 15.0% |
| !! | TTGAATTCAAATTGATTATT+CGG | + | chr3.3:49391557-49391576 | MS.gene08078:intron | 15.0% |
| !! | TTTAAGCCTATTATTAATTA+AGG | + | chr3.3:49393689-49393708 | MS.gene08078:intron | 15.0% |
| !! | TTTAGTCCTTAATTAATAAT+AGG | - | chr3.3:49393698-49393717 | None:intergenic | 15.0% |
| !!! | AAATATAGAATATTTGGTTT+TGG | + | chr3.3:49393395-49393414 | MS.gene08078:intron | 15.0% |
| !!! | AACTAAATATTTTAAGTACT+AGG | - | chr3.3:49394120-49394139 | None:intergenic | 15.0% |
| !!! | AATTTCTAAAATTATTGTCA+TGG | - | chr3.3:49392392-49392411 | None:intergenic | 15.0% |
| !!! | AATTTTTCTCATATACAATA+TGG | - | chr3.3:49391618-49391637 | None:intergenic | 15.0% |
| !!! | CTGAATTTGTTTATTTTTAT+GGG | + | chr3.3:49390774-49390793 | MS.gene08078:intron | 15.0% |
| !!! | TCCCTATAAAAATATTTTTT+TGG | + | chr3.3:49393359-49393378 | MS.gene08078:intron | 15.0% |
| !!! | TCTGAATTTGTTTATTTTTA+TGG | + | chr3.3:49390773-49390792 | MS.gene08078:intron | 15.0% |
| !! | AAAATTATAGAACAAGGTAA+AGG | - | chr3.3:49393134-49393153 | None:intergenic | 20.0% |
| !! | AAAGGTTAAGCAAATTAAAA+TGG | + | chr3.3:49391329-49391348 | MS.gene08078:intron | 20.0% |
| !! | AAATCATTTCATCTTGAAAT+TGG | + | chr3.3:49393446-49393465 | MS.gene08078:intron | 20.0% |
| !! | AAGATTAAAACAAAATACCA+AGG | - | chr3.3:49393422-49393441 | None:intergenic | 20.0% |
| !! | AGGACTAAAATGAATATTAT+AGG | - | chr3.3:49393474-49393493 | None:intergenic | 20.0% |
| !! | ATAAAACCAAAAGAATAAGA+CGG | - | chr3.3:49391500-49391519 | None:intergenic | 20.0% |
| !! | ATCTTCAATAAACATCTAAT+TGG | - | chr3.3:49392963-49392982 | None:intergenic | 20.0% |
| !! | ATGTTAAAAAAATATCCATG+AGG | - | chr3.3:49394189-49394208 | None:intergenic | 20.0% |
| !! | CAAAATAAATACACATGTTA+TGG | - | chr3.3:49392883-49392902 | None:intergenic | 20.0% |
| !! | CAAATATTCTACATATTACA+AGG | + | chr3.3:49393513-49393532 | MS.gene08078:intron | 20.0% |
| !! | GAAGTTAAAATTATAGAACA+AGG | - | chr3.3:49393140-49393159 | None:intergenic | 20.0% |
| !! | GGACTAAAATGAATATTATA+GGG | - | chr3.3:49393473-49393492 | None:intergenic | 20.0% |
| !! | TAATGAAAATACATACTACA+AGG | - | chr3.3:49393058-49393077 | None:intergenic | 20.0% |
| !! | TGAATATATGTAGTTATGAA+TGG | + | chr3.3:49392145-49392164 | MS.gene08078:intron | 20.0% |
| !!! | AAATTGATTCATATTGGATT+TGG | - | chr3.3:49393540-49393559 | None:intergenic | 20.0% |
| !!! | AACCAAAAAAATATTTTTGC+AGG | + | chr3.3:49393622-49393641 | MS.gene08078:intron | 20.0% |
| !!! | ACCAAAAAAATATTTTTGCA+GGG | + | chr3.3:49393623-49393642 | MS.gene08078:intron | 20.0% |
| !!! | ACCAAATTTTTTATATTTGC+AGG | + | chr3.3:49393593-49393612 | MS.gene08078:intron | 20.0% |
| !!! | CAATATGAATCAATTTTACA+AGG | + | chr3.3:49393544-49393563 | MS.gene08078:intron | 20.0% |
| !!! | CCAAATTTTTTATATTTGCA+GGG | + | chr3.3:49393594-49393613 | MS.gene08078:intron | 20.0% |
| !!! | CTTACACTGTTATTTTTAAT+AGG | + | chr3.3:49392257-49392276 | MS.gene08078:intron | 20.0% |
| !!! | CTTGTAAAATTGATTCATAT+TGG | - | chr3.3:49393546-49393565 | None:intergenic | 20.0% |
| !!! | TATTTATTTTGTGTGCTTTT+GGG | + | chr3.3:49392892-49392911 | MS.gene08078:intron | 20.0% |
| !!! | TTCATTTTGACTGTAAAAAA+AGG | + | chr3.3:49393856-49393875 | MS.gene08078:intron | 20.0% |
| !!! | TTTAAGCTGCTTTTTTAATT+GGG | + | chr3.3:49390573-49390592 | MS.gene08078:intron | 20.0% |
| !!! | TTTTAAGCTGCTTTTTTAAT+TGG | + | chr3.3:49390572-49390591 | MS.gene08078:intron | 20.0% |
| !!! | TTTTCTATGTTCGAAATTTA+TGG | + | chr3.3:49391356-49391375 | MS.gene08078:intron | 20.0% |
| !!! | TTTTTTAACATTGTAGTAAG+AGG | + | chr3.3:49394198-49394217 | MS.gene08078:intron | 20.0% |
| ! | ACACAAATCAGAATAATCTA+GGG | - | chr3.3:49392526-49392545 | None:intergenic | 25.0% |
| ! | ACCAAATATTCTATATTTGC+AGG | - | chr3.3:49393393-49393412 | None:intergenic | 25.0% |
| ! | AGCAAGAAAAATTACTTACA+GGG | - | chr3.3:49391193-49391212 | None:intergenic | 25.0% |
| ! | ATATATGTAGTTATGAATGG+AGG | + | chr3.3:49392148-49392167 | MS.gene08078:intron | 25.0% |
| ! | ATTAATATTTGTGTTGGAAG+AGG | + | chr3.3:49392652-49392671 | MS.gene08078:intron | 25.0% |
| ! | CCAAATATTCTATATTTGCA+GGG | - | chr3.3:49393392-49393411 | None:intergenic | 25.0% |
| ! | CCATATCAGTTATAATAGAT+GGG | + | chr3.3:49392228-49392247 | MS.gene08078:intron | 25.0% |
| ! | CCCTGCAAATATAAAAAATT+TGG | - | chr3.3:49393597-49393616 | None:intergenic | 25.0% |
| ! | CTTCAAAATCTATGGAAAAA+TGG | - | chr3.3:49392361-49392380 | None:intergenic | 25.0% |
| ! | GATATGGATGATAATATACA+TGG | - | chr3.3:49392215-49392234 | None:intergenic | 25.0% |
| ! | GTTTAATTGTTTATCCATGT+GGG | + | chr3.3:49392463-49392482 | MS.gene08078:intron | 25.0% |
| ! | TAATGGTGAAAAAACTTTCT+CGG | + | chr3.3:49394790-49394809 | MS.gene08078:CDS | 25.0% |
| ! | TATATATTCTTGTTGGAAAG+CGG | + | chr3.3:49394238-49394257 | MS.gene08078:CDS | 25.0% |
| ! | TCAGAGCTTAAATTCTTATT+TGG | + | chr3.3:49394513-49394532 | MS.gene08078:intron | 25.0% |
| ! | TCCATATCAGTTATAATAGA+TGG | + | chr3.3:49392227-49392246 | MS.gene08078:intron | 25.0% |
| ! | TCTAAGAATTTGAGAAGAAA+AGG | - | chr3.3:49390339-49390358 | None:intergenic | 25.0% |
| ! | TGATAATATACATGGTAGAT+TGG | - | chr3.3:49392207-49392226 | None:intergenic | 25.0% |
| ! | TGTTTAATTGTTTATCCATG+TGG | + | chr3.3:49392462-49392481 | MS.gene08078:intron | 25.0% |
| ! | TTAAGGCTTAAATATGGAAA+TGG | + | chr3.3:49393305-49393324 | MS.gene08078:intron | 25.0% |
| ! | TTAATATTTGTGTTGGAAGA+GGG | + | chr3.3:49392653-49392672 | MS.gene08078:intron | 25.0% |
| ! | TTAATTGGGTAACTTGAAAT+TGG | + | chr3.3:49390587-49390606 | MS.gene08078:intron | 25.0% |
| ! | TTCATCAGAAAATGAATACA+TGG | - | chr3.3:49392129-49392148 | None:intergenic | 25.0% |
| ! | TTCATTATTTCCGTATCTAT+TGG | + | chr3.3:49393071-49393090 | MS.gene08078:intron | 25.0% |
| !! | AATTCAATGCTGTTTAATAG+GGG | - | chr3.3:49392332-49392351 | None:intergenic | 25.0% |
| !! | ACAATTTGATCATCTTTTTC+AGG | + | chr3.3:49391794-49391813 | MS.gene08078:intron | 25.0% |
| !! | AGCTTAAATTCTTATTTGGT+TGG | + | chr3.3:49394517-49394536 | MS.gene08078:intron | 25.0% |
| !! | ATGGATACTGTGTATTTTAT+AGG | - | chr3.3:49392864-49392883 | None:intergenic | 25.0% |
| !! | CAATTCAATGCTGTTTAATA+GGG | - | chr3.3:49392333-49392352 | None:intergenic | 25.0% |
| !! | CATTTTTCCATAGATTTTGA+AGG | + | chr3.3:49392359-49392378 | MS.gene08078:intron | 25.0% |
| !! | TCAATTCAATGCTGTTTAAT+AGG | - | chr3.3:49392334-49392353 | None:intergenic | 25.0% |
| !!! | AAAATGATGCTTTTTTTGCA+TGG | + | chr3.3:49391832-49391851 | MS.gene08078:CDS | 25.0% |
| !!! | AAACCAATACAGTTTTGTTT+TGG | - | chr3.3:49392284-49392303 | None:intergenic | 25.0% |
| !!! | AGTTTTTTCACCATTACTAT+CGG | - | chr3.3:49394786-49394805 | None:intergenic | 25.0% |
| !!! | GTATTTATTTTGTGTGCTTT+TGG | + | chr3.3:49392891-49392910 | MS.gene08078:intron | 25.0% |
| !!! | GTTTCAATGATTAGTTTGTT+TGG | + | chr3.3:49391764-49391783 | MS.gene08078:intron | 25.0% |
| !!! | TCCCTGCAAAAATATTTTTT+TGG | - | chr3.3:49393627-49393646 | None:intergenic | 25.0% |
| !!! | TGCAAAAAAAGCATCATTTT+CGG | - | chr3.3:49391832-49391851 | None:intergenic | 25.0% |
| !!! | TGTTGTTGTTATGATGTTTT+TGG | + | chr3.3:49390849-49390868 | MS.gene08078:intron | 25.0% |
| AACATATATGTGTTTGCATG+TGG | + | chr3.3:49391254-49391273 | MS.gene08078:intron | 30.0% | |
| ACAAAATGATCATGTGCAAA+GGG | - | chr3.3:49390734-49390753 | None:intergenic | 30.0% | |
| ACAGTCAAAATGAAGAAGAA+AGG | - | chr3.3:49393850-49393869 | None:intergenic | 30.0% | |
| ACCAAAGCAACAAGTTATAA+CGG | - | chr3.3:49394592-49394611 | None:intergenic | 30.0% | |
| ACCACAACATATAGCAAAAT+TGG | - | chr3.3:49392100-49392119 | None:intergenic | 30.0% | |
| AGAAGTCATTGAAAACATAG+AGG | + | chr3.3:49394829-49394848 | MS.gene08078:CDS | 30.0% | |
| AGGACTAAAACAAAATACCA+AGG | + | chr3.3:49393564-49393583 | MS.gene08078:intron | 30.0% | |
| ATCCAATATGTGTGTGAAAA+AGG | + | chr3.3:49393006-49393025 | MS.gene08078:intron | 30.0% | |
| ATGGAAAATTGGGAAAGAAT+TGG | - | chr3.3:49390295-49390314 | None:intergenic | 30.0% | |
| ATTGAAAACATAGAGGATGT+AGG | + | chr3.3:49394836-49394855 | MS.gene08078:CDS | 30.0% | |
| CAAAACGTCAGATATTTACA+GGG | - | chr3.3:49393332-49393351 | None:intergenic | 30.0% | |
| CAAAATCTATGGAAAAATGG+TGG | - | chr3.3:49392358-49392377 | None:intergenic | 30.0% | |
| CAAAATGTCAGATATTTGCA+GGG | + | chr3.3:49393654-49393673 | MS.gene08078:intron | 30.0% | |
| CACAAATCAGAATAATCTAG+GGG | - | chr3.3:49392525-49392544 | None:intergenic | 30.0% | |
| CACATAGATATCACAAAAGT+AGG | - | chr3.3:49391586-49391605 | None:intergenic | 30.0% | |
| CAGCAAGAAAAATTACTTAC+AGG | - | chr3.3:49391194-49391213 | None:intergenic | 30.0% | |
| CAGTCAAAATGAAGAAGAAA+GGG | - | chr3.3:49393849-49393868 | None:intergenic | 30.0% | |
| CCCATCTATTATAACTGATA+TGG | - | chr3.3:49392231-49392250 | None:intergenic | 30.0% | |
| CCCTGCAAATATAGAATATT+TGG | + | chr3.3:49393389-49393408 | MS.gene08078:intron | 30.0% | |
| GACACAAATCAGAATAATCT+AGG | - | chr3.3:49392527-49392546 | None:intergenic | 30.0% | |
| GAGAAAAAAACCTGTACATT+AGG | + | chr3.3:49392170-49392189 | MS.gene08078:intron | 30.0% | |
| GATCCAATGAACAACATTAT+TGG | + | chr3.3:49391456-49391475 | MS.gene08078:intron | 30.0% | |
| GATTAGAGATCTAGAGATTT+AGG | - | chr3.3:49393811-49393830 | None:intergenic | 30.0% | |
| GCAATCCAAATAATTCAAGA+AGG | - | chr3.3:49392826-49392845 | None:intergenic | 30.0% | |
| TACTGTTCATATTACTGTTG+AGG | + | chr3.3:49394388-49394407 | MS.gene08078:CDS | 30.0% | |
| TAGATTGCCTTCAAAATCTA+TGG | - | chr3.3:49392369-49392388 | None:intergenic | 30.0% | |
| TCAAAACGTCAGATATTTAC+AGG | - | chr3.3:49393333-49393352 | None:intergenic | 30.0% | |
| TTATTTCCGTATCTATTGGT+AGG | + | chr3.3:49393075-49393094 | MS.gene08078:intron | 30.0% | |
| TTCAAAATCTCCTAATGTAC+AGG | - | chr3.3:49392183-49392202 | None:intergenic | 30.0% | |
| TTGACATGCAAAAGTTGTTT+GGG | + | chr3.3:49390812-49390831 | MS.gene08078:intron | 30.0% | |
| TTTGAAAATGCAAGGTTGTT+TGG | + | chr3.3:49392613-49392632 | MS.gene08078:intron | 30.0% | |
| TTTGACATGCAAAAGTTGTT+TGG | + | chr3.3:49390811-49390830 | MS.gene08078:intron | 30.0% | |
| ! | AATTTGAGAAGAAAAGGCAT+TGG | - | chr3.3:49390333-49390352 | None:intergenic | 30.0% |
| ! | AGAAATTTTGCACTTAGATG+AGG | + | chr3.3:49392405-49392424 | MS.gene08078:intron | 30.0% |
| ! | ATCCAATCTAGAATAGCAAA+AGG | - | chr3.3:49390534-49390553 | None:intergenic | 30.0% |
| ! | GTAGTAAGAGGTACAATATT+TGG | + | chr3.3:49394210-49394229 | MS.gene08078:intron | 30.0% |
| ! | TCTTTCAGTATTTTGCTGAT+TGG | + | chr3.3:49390405-49390424 | MS.gene08078:intron | 30.0% |
| ! | TTAATAGGGGTTTAGAATAC+AGG | - | chr3.3:49392319-49392338 | None:intergenic | 30.0% |
| !! | AGAAATTGGTGATGGAAAAT+TGG | - | chr3.3:49390306-49390325 | None:intergenic | 30.0% |
| !! | AGTCCGAAAGTATCATATAT+GGG | - | chr3.3:49393111-49393130 | None:intergenic | 30.0% |
| !! | ATTTGAGAAGAAAAGGCATT+GGG | - | chr3.3:49390332-49390351 | None:intergenic | 30.0% |
| !! | CATTTTAGTCCTCATTTTGA+GGG | + | chr3.3:49393482-49393501 | MS.gene08078:intron | 30.0% |
| !! | GAAATTGGTGATGGAAAATT+GGG | - | chr3.3:49390305-49390324 | None:intergenic | 30.0% |
| !! | GCATGCATTTTTCAGTAAAA+GGG | - | chr3.3:49392804-49392823 | None:intergenic | 30.0% |
| !! | TCATTGATGATGTTCTTGAA+TGG | + | chr3.3:49394645-49394664 | MS.gene08078:CDS | 30.0% |
| !! | TCATTTTAGTCCTCATTTTG+AGG | + | chr3.3:49393481-49393500 | MS.gene08078:intron | 30.0% |
| !!! | AAAAATTTGGTTTTGGTCCT+TGG | - | chr3.3:49393584-49393603 | None:intergenic | 30.0% |
| !!! | AAAAGCATCATTTTCGGAAA+AGG | - | chr3.3:49391826-49391845 | None:intergenic | 30.0% |
| !!! | ATCCTTTTGCTATTCTAGAT+TGG | + | chr3.3:49390529-49390548 | MS.gene08078:intron | 30.0% |
| !!! | CTTTTGGTTTTATCTTGTGT+AGG | + | chr3.3:49391507-49391526 | MS.gene08078:intron | 30.0% |
| AAAATCCTTGTCGTCCATTT+CGG | - | chr3.3:49394351-49394370 | None:intergenic | 35.0% | |
| AAATTTATGGTCACTACCGT+TGG | + | chr3.3:49391369-49391388 | MS.gene08078:intron | 35.0% | |
| AACATTTGTAACAGCCCATA+AGG | - | chr3.3:49392066-49392085 | None:intergenic | 35.0% | |
| ATCTATTGGTAGGTTAGCAT+TGG | + | chr3.3:49393085-49393104 | MS.gene08078:intron | 35.0% | |
| ATGTTGTTCATTGGATCAAC+AGG | - | chr3.3:49391453-49391472 | None:intergenic | 35.0% | |
| CAAAATGATCATGTGCAAAG+GGG | - | chr3.3:49390733-49390752 | None:intergenic | 35.0% | |
| CAAAGAAAGATGAAGAGGAA+AGG | + | chr3.3:49394325-49394344 | MS.gene08078:CDS | 35.0% | |
| CAAATAGCCAATGTTAACAC+AGG | - | chr3.3:49391909-49391928 | None:intergenic | 35.0% | |
| CACAAAATGATCATGTGCAA+AGG | - | chr3.3:49390735-49390754 | None:intergenic | 35.0% | |
| CCAAAATGTCAGATATTTGC+AGG | + | chr3.3:49393653-49393672 | MS.gene08078:intron | 35.0% | |
| CTTTCCTCTTCATCTTTCTT+TGG | - | chr3.3:49394327-49394346 | None:intergenic | 35.0% | |
| GAGCTTCTTGAAAAATCATC+CGG | + | chr3.3:49391007-49391026 | MS.gene08078:CDS | 35.0% | |
| GCATGCCTTCTTGAATTATT+TGG | + | chr3.3:49392818-49392837 | MS.gene08078:intron | 35.0% | |
| GGAATAACATCAAAGACCAA+CGG | - | chr3.3:49391388-49391407 | None:intergenic | 35.0% | |
| GGACCAAAACAAAACTGTAT+TGG | + | chr3.3:49392278-49392297 | MS.gene08078:intron | 35.0% | |
| GGCGTTCTATATATTCTTGT+TGG | + | chr3.3:49394231-49394250 | MS.gene08078:CDS | 35.0% | |
| GGGAAAATTTCTAAATGAGC+AGG | - | chr3.3:49391173-49391192 | None:intergenic | 35.0% | |
| GTAGTTATTCCTCTGTTCAA+AGG | + | chr3.3:49391311-49391330 | MS.gene08078:intron | 35.0% | |
| TAATACTTTACTCGTGTGCT+GGG | + | chr3.3:49391964-49391983 | MS.gene08078:CDS | 35.0% | |
| TAGTACCATAGTTGTCAAAG+CGG | + | chr3.3:49393177-49393196 | MS.gene08078:intron | 35.0% | |
| TATTAGTATACTCTCCCACA+TGG | - | chr3.3:49392480-49392499 | None:intergenic | 35.0% | |
| TGCTAACCTACCAATAGATA+CGG | - | chr3.3:49393084-49393103 | None:intergenic | 35.0% | |
| TGGCCAATAATGTTGTTCAT+TGG | - | chr3.3:49391462-49391481 | None:intergenic | 35.0% | |
| TGGCCCATATATGATACTTT+CGG | + | chr3.3:49393105-49393124 | MS.gene08078:intron | 35.0% | |
| TTAATACTTTACTCGTGTGC+TGG | + | chr3.3:49391963-49391982 | MS.gene08078:CDS | 35.0% | |
| TTGGGTTTATTCATGCATGA+TGG | + | chr3.3:49392910-49392929 | MS.gene08078:intron | 35.0% | |
| TTGTAAAACGACATCCACTT+TGG | + | chr3.3:49391859-49391878 | MS.gene08078:CDS | 35.0% | |
| TTTGCTTAACCTTTGAACAG+AGG | - | chr3.3:49391323-49391342 | None:intergenic | 35.0% | |
| ! | AGAACAGAGATGAGATTTTG+TGG | + | chr3.3:49393890-49393909 | MS.gene08078:intron | 35.0% |
| ! | CCTGCAAATATCTGACATTT+TGG | - | chr3.3:49393656-49393675 | None:intergenic | 35.0% |
| ! | TTTTCACCATTACTATCGGT+TGG | - | chr3.3:49394782-49394801 | None:intergenic | 35.0% |
| !! | AGCCTTTTTCACACACATAT+TGG | - | chr3.3:49393011-49393030 | None:intergenic | 35.0% |
| !! | GAGTCCGAAAGTATCATATA+TGG | - | chr3.3:49393112-49393131 | None:intergenic | 35.0% |
| !! | GATTTTAGTCCCTCAAAATG+AGG | - | chr3.3:49393494-49393513 | None:intergenic | 35.0% |
| !! | GCCAATTTTGCTATATGTTG+TGG | + | chr3.3:49392096-49392115 | MS.gene08078:intron | 35.0% |
| !! | GGCATGCATTTTTCAGTAAA+AGG | - | chr3.3:49392805-49392824 | None:intergenic | 35.0% |
| !! | GGTTAAAGACATTCTGGAAT+CGG | + | chr3.3:49391031-49391050 | MS.gene08078:CDS | 35.0% |
| !!! | AGACACTCCTATCTTTTTTC+TGG | + | chr3.3:49391883-49391902 | MS.gene08078:CDS | 35.0% |
| !!! | GAATATTTGGTTTTGGTCCT+TGG | + | chr3.3:49393402-49393421 | MS.gene08078:intron | 35.0% |
| !!! | GTGTTTCTGGTAGTTTTCTA+GGG | + | chr3.3:49392579-49392598 | MS.gene08078:intron | 35.0% |
| !!! | TGCATGGTTTTGAAAATGCA+AGG | + | chr3.3:49392605-49392624 | MS.gene08078:intron | 35.0% |
| !!! | TGTTTCTGGTAGTTTTCTAG+GGG | + | chr3.3:49392580-49392599 | MS.gene08078:intron | 35.0% |
| AAACCCTAGAGAGAGAAAGA+GGG | - | chr3.3:49390272-49390291 | None:intergenic | 40.0% | |
| AACTATGGTACTAGGTACCT+AGG | - | chr3.3:49393170-49393189 | None:intergenic | 40.0% | |
| ACACAGGCCAGAAAAAAGAT+AGG | - | chr3.3:49391893-49391912 | None:intergenic | 40.0% | |
| ACTTACTCAACAGTAGAGAG+AGG | - | chr3.3:49392004-49392023 | None:intergenic | 40.0% | |
| AGAATGTGACTAATGCCACA+GGG | + | chr3.3:49394705-49394724 | MS.gene08078:CDS | 40.0% | |
| ATCTCGAAACCAACTCCTTA+TGG | - | chr3.3:49390935-49390954 | None:intergenic | 40.0% | |
| ATTAAGAGCTTGCAGCTATG+AGG | - | chr3.3:49391948-49391967 | None:intergenic | 40.0% | |
| CATGTGCAAAGGGGATATAA+AGG | - | chr3.3:49390724-49390743 | None:intergenic | 40.0% | |
| CTTCTTGAAAAATCATCCGG+AGG | + | chr3.3:49391010-49391029 | MS.gene08078:CDS | 40.0% | |
| GCTTTGACAACTATGGTACT+AGG | - | chr3.3:49393178-49393197 | None:intergenic | 40.0% | |
| GGAAGAAAAAGCTGTCTACT+TGG | + | chr3.3:49391147-49391166 | MS.gene08078:CDS | 40.0% | |
| GTAGAGAGAGGATGAGAAAA+AGG | - | chr3.3:49391992-49392011 | None:intergenic | 40.0% | |
| TCAGAAACAAGCTGTGAAGA+AGG | + | chr3.3:49390875-49390894 | MS.gene08078:intron | 40.0% | |
| TCCAGAATGTCTTTAACCTC+CGG | - | chr3.3:49391029-49391048 | None:intergenic | 40.0% | |
| TGAGAAAGTGAGAGACCATA+AGG | + | chr3.3:49390917-49390936 | MS.gene08078:CDS | 40.0% | |
| TGGTAAAAACTCTTCGTCCT+GGG | + | chr3.3:49391126-49391145 | MS.gene08078:CDS | 40.0% | |
| TGTGAAGAAGGATGTGTATC+AGG | + | chr3.3:49390887-49390906 | MS.gene08078:CDS | 40.0% | |
| TTAAGAGCTTGCAGCTATGA+GGG | - | chr3.3:49391947-49391966 | None:intergenic | 40.0% | |
| TTGGCCAAAGAAAGATGAAG+AGG | + | chr3.3:49394320-49394339 | MS.gene08078:CDS | 40.0% | |
| TTGGGTGTAGAAATTGGTGA+TGG | - | chr3.3:49390314-49390333 | None:intergenic | 40.0% | |
| TTTGCACTTAGATGAGGAAG+AGG | + | chr3.3:49392411-49392430 | MS.gene08078:intron | 40.0% | |
| ! | AAGGATTTTCTATGCTGTGG+TGG | + | chr3.3:49394362-49394381 | MS.gene08078:CDS | 40.0% |
| ! | ATAAGGAGTTGGTTTCGAGA+TGG | + | chr3.3:49390934-49390953 | MS.gene08078:CDS | 40.0% |
| ! | CAAATTGTTTTCCCTGCATG+GGG | - | chr3.3:49394553-49394572 | None:intergenic | 40.0% |
| ! | GACAAGGATTTTCTATGCTG+TGG | + | chr3.3:49394359-49394378 | MS.gene08078:CDS | 40.0% |
| ! | GCAAATTGTTTTCCCTGCAT+GGG | - | chr3.3:49394554-49394573 | None:intergenic | 40.0% |
| ! | TAAGGAGTTGGTTTCGAGAT+GGG | + | chr3.3:49390935-49390954 | MS.gene08078:CDS | 40.0% |
| ! | TGCAAATTGTTTTCCCTGCA+TGG | - | chr3.3:49394555-49394574 | None:intergenic | 40.0% |
| ! | TGCGAGAGTTGTTCAGATTT+TGG | + | chr3.3:49394301-49394320 | MS.gene08078:CDS | 40.0% |
| ! | TTTCTGGCCTGTGTTAACAT+TGG | + | chr3.3:49391899-49391918 | MS.gene08078:CDS | 40.0% |
| !! | AAGGCATTGGGTGTAGAAAT+TGG | - | chr3.3:49390320-49390339 | None:intergenic | 40.0% |
| !! | ACACGTGTCGAGTATTTTAG+AGG | + | chr3.3:49390972-49390991 | MS.gene08078:CDS | 40.0% |
| !! | CACGTGTCGAGTATTTTAGA+GGG | + | chr3.3:49390973-49390992 | MS.gene08078:CDS | 40.0% |
| !! | GCCGTTATAACTTGTTGCTT+TGG | + | chr3.3:49394588-49394607 | MS.gene08078:intron | 40.0% |
| !! | TAGTTTTCTAGGGGTTTGCA+TGG | + | chr3.3:49392589-49392608 | MS.gene08078:intron | 40.0% |
| !! | TGTCGAGTATTTTAGAGGGA+AGG | + | chr3.3:49390977-49390996 | MS.gene08078:CDS | 40.0% |
| !!! | GGTGTTTCTGGTAGTTTTCT+AGG | + | chr3.3:49392578-49392597 | MS.gene08078:intron | 40.0% |
| AACCATCTCCAGTTCATGGA+AGG | - | chr3.3:49392553-49392572 | None:intergenic | 45.0% | |
| AGGCAAAAGCGGAACAAAAG+CGG | - | chr3.3:49394004-49394023 | None:intergenic | 45.0% | |
| AGTGAGAGACCATAAGGAGT+TGG | + | chr3.3:49390923-49390942 | MS.gene08078:CDS | 45.0% | |
| ATCCATGAGGCCGAAGAAAA+GGG | - | chr3.3:49394176-49394195 | None:intergenic | 45.0% | |
| ATCCCAGACAAGGCTAAACT+AGG | - | chr3.3:49394674-49394693 | None:intergenic | 45.0% | |
| ATGAAGAGGAAAGGCCGAAA+TGG | + | chr3.3:49394334-49394353 | MS.gene08078:CDS | 45.0% | |
| CAGAATGTGACTAATGCCAC+AGG | + | chr3.3:49394704-49394723 | MS.gene08078:CDS | 45.0% | |
| CGTTTCCGCTTTGACAACTA+TGG | - | chr3.3:49393185-49393204 | None:intergenic | 45.0% | |
| CTAGGCTCTGTTGTCAATAG+CGG | - | chr3.3:49394102-49394121 | None:intergenic | 45.0% | |
| GAAACCCTAGAGAGAGAAAG+AGG | - | chr3.3:49390273-49390292 | None:intergenic | 45.0% | |
| GAAGCTCCAACCGATAGTAA+TGG | + | chr3.3:49394773-49394792 | MS.gene08078:CDS | 45.0% | |
| GATGGTTATGCTGGTGTTTC+TGG | + | chr3.3:49392566-49392585 | MS.gene08078:intron | 45.0% | |
| GCATAACCATCTCCAGTTCA+TGG | - | chr3.3:49392557-49392576 | None:intergenic | 45.0% | |
| GGACAGGAGTTTAGAAACAG+AGG | + | chr3.3:49391052-49391071 | MS.gene08078:CDS | 45.0% | |
| GTGGTAAAAACTCTTCGTCC+TGG | + | chr3.3:49391125-49391144 | MS.gene08078:CDS | 45.0% | |
| GTTATTCCTCTGCCTGACAT+GGG | + | chr3.3:49391400-49391419 | MS.gene08078:intron | 45.0% | |
| TAAGACGGCCACACACAAAA+AGG | - | chr3.3:49391485-49391504 | None:intergenic | 45.0% | |
| TAGTTGTCAAAGCGGAAACG+CGG | + | chr3.3:49393185-49393204 | MS.gene08078:intron | 45.0% | |
| TATCCATGAGGCCGAAGAAA+AGG | - | chr3.3:49394177-49394196 | None:intergenic | 45.0% | |
| TCCGGAGGTTAAAGACATTC+TGG | + | chr3.3:49391025-49391044 | MS.gene08078:CDS | 45.0% | |
| TCTAGGGGAATCATGAAGAC+AGG | - | chr3.3:49392510-49392529 | None:intergenic | 45.0% | |
| TCTCCCTCTTTCTCTCTCTA+GGG | + | chr3.3:49390266-49390285 | MS.gene08078:intron | 45.0% | |
| TGAACTGGAGATGGTTATGC+TGG | + | chr3.3:49392557-49392576 | MS.gene08078:intron | 45.0% | |
| TGTTATTCCTCTGCCTGACA+TGG | + | chr3.3:49391399-49391418 | MS.gene08078:intron | 45.0% | |
| TTCTTGTTGGAAAGCGGATC+TGG | + | chr3.3:49394244-49394263 | MS.gene08078:CDS | 45.0% | |
| TTGTCAATAGCGGTCTAACG+CGG | - | chr3.3:49394092-49394111 | None:intergenic | 45.0% | |
| TTTGTCCATCATCCCAGACA+AGG | - | chr3.3:49394684-49394703 | None:intergenic | 45.0% | |
| ! | AGGGGTTTAGAATACAGGTG+TGG | - | chr3.3:49392314-49392333 | None:intergenic | 45.0% |
| ! | ATTGGCCACCTTTTTGTGTG+TGG | + | chr3.3:49391474-49391493 | MS.gene08078:intron | 45.0% |
| ! | GTTTTTCCCCAACATCCTTG+CGG | + | chr3.3:49394266-49394285 | MS.gene08078:CDS | 45.0% |
| ! | TTTAGTTCGCTGTGATCGTG+TGG | + | chr3.3:49391106-49391125 | MS.gene08078:CDS | 45.0% |
| !! | AAGACATTCTGGAATCGGAC+AGG | + | chr3.3:49391036-49391055 | MS.gene08078:CDS | 45.0% |
| !! | CTCCTAGTTTAGCCTTGTCT+GGG | + | chr3.3:49394669-49394688 | MS.gene08078:CDS | 45.0% |
| !! | GTAGACAGCTTTTTCTTCCC+AGG | - | chr3.3:49391146-49391165 | None:intergenic | 45.0% |
| !! | GTGTGGCCGTCTTATTCTTT+TGG | + | chr3.3:49391491-49391510 | MS.gene08078:intron | 45.0% |
| !! | TCTCCTAGTTTAGCCTTGTC+TGG | + | chr3.3:49394668-49394687 | MS.gene08078:CDS | 45.0% |
| !! | TGTTGCTTTGGTCTTTGTGC+AGG | + | chr3.3:49394600-49394619 | MS.gene08078:intron | 45.0% |
| !! | TTTAGCCTTGTCTGGGATGA+TGG | + | chr3.3:49394676-49394695 | MS.gene08078:CDS | 45.0% |
| !!! | TTCGAGATGGGCTGTTTTAC+AGG | + | chr3.3:49390947-49390966 | MS.gene08078:CDS | 45.0% |
| !!! | TTTTAACTTCATGCGCGCCT+AGG | + | chr3.3:49393150-49393169 | MS.gene08078:intron | 45.0% |
| !! | AACTAAATATTATATTATTA+AGG | + | chr3.3:49393288-49393307 | MS.gene08078:intron | 5.0% |
| AAAGGCCGAAATGGACGACA+AGG | + | chr3.3:49394343-49394362 | MS.gene08078:CDS | 50.0% | |
| AAGAGGGAGAGAGAAACCCT+AGG | - | chr3.3:49390256-49390275 | None:intergenic | 50.0% | |
| ATGCACCTGATGAAGCTGCA+AGG | + | chr3.3:49394415-49394434 | MS.gene08078:CDS | 50.0% | |
| CAGGTCATTCTTTCTCACCG+TGG | - | chr3.3:49391434-49391453 | None:intergenic | 50.0% | |
| CTCTCCCTCTTTCTCTCTCT+AGG | + | chr3.3:49390265-49390284 | MS.gene08078:intron | 50.0% | |
| GACCTTCCATGAACTGGAGA+TGG | + | chr3.3:49392548-49392567 | MS.gene08078:intron | 50.0% | |
| GGCAAAAGCGGAACAAAAGC+GGG | - | chr3.3:49394003-49394022 | None:intergenic | 50.0% | |
| GTGTCAGACCTTCCATGAAC+TGG | + | chr3.3:49392542-49392561 | MS.gene08078:intron | 50.0% | |
| TGCACCTGATGAAGCTGCAA+GGG | + | chr3.3:49394416-49394435 | MS.gene08078:CDS | 50.0% | |
| ! | CTTGCAGCTATGAGGGTACA+CGG | - | chr3.3:49391940-49391959 | None:intergenic | 50.0% |
| ! | TTGCAGCTATGAGGGTACAC+GGG | - | chr3.3:49391939-49391958 | None:intergenic | 50.0% |
| !! | GATAGGAGTGTCTGCCAAAG+TGG | - | chr3.3:49391876-49391895 | None:intergenic | 50.0% |
| ACAAGGCAGCACAACAGGAC+CGG | + | chr3.3:49394745-49394764 | MS.gene08078:CDS | 55.0% | |
| AGAAACCCTAGGAGGGACGT+CGG | - | chr3.3:49390245-49390264 | None:intergenic | 55.0% | |
| AGGGAGAGAGAAACCCTAGG+AGG | - | chr3.3:49390253-49390272 | None:intergenic | 55.0% | |
| AGTCGCGCGTTAGGCAAAAG+CGG | - | chr3.3:49394015-49394034 | None:intergenic | 55.0% | |
| CTGATGAAGCTGCAAGGGCA+AGG | + | chr3.3:49394421-49394440 | MS.gene08078:CDS | 55.0% | |
| CTTCCTCCGCAAGGATGTTG+GGG | - | chr3.3:49394275-49394294 | None:intergenic | 55.0% | |
| CTTGCCCTTGCAGCTTCATC+AGG | - | chr3.3:49394423-49394442 | None:intergenic | 55.0% | |
| GAACAAAAGCGGGTCAACGC+GGG | - | chr3.3:49393993-49394012 | None:intergenic | 55.0% | |
| GAAGAAATCATCGGGAGGCG+CGG | + | chr3.3:49390174-49390193 | MS.gene08078:CDS | 55.0% | |
| GACGGCCACACACAAAAAGG+TGG | - | chr3.3:49391482-49391501 | None:intergenic | 55.0% | |
| GATCTACGACACCCCATGCA+GGG | + | chr3.3:49394539-49394558 | MS.gene08078:intron | 55.0% | |
| GCTTCCTCCGCAAGGATGTT+GGG | - | chr3.3:49394276-49394295 | None:intergenic | 55.0% | |
| GGAACAAAAGCGGGTCAACG+CGG | - | chr3.3:49393994-49394013 | None:intergenic | 55.0% | |
| GGCAAAAAGCGGGTCAATGC+GGG | - | chr3.3:49393972-49393991 | None:intergenic | 55.0% | |
| GGCCACCCCAAAAATTGACG+CGG | + | chr3.3:49393216-49393235 | MS.gene08078:intron | 55.0% | |
| GGGAGAGAGAAACCCTAGGA+GGG | - | chr3.3:49390252-49390271 | None:intergenic | 55.0% | |
| GGGCAAAAAGCGGGTCAATG+CGG | - | chr3.3:49393973-49393992 | None:intergenic | 55.0% | |
| GGGTCAACGCGGGTAAAAAG+CGG | - | chr3.3:49393941-49393960 | None:intergenic | 55.0% | |
| GGGTCAATGCGGGCAAAAAG+CGG | - | chr3.3:49393962-49393981 | None:intergenic | 55.0% | |
| GGTCAACGCGGGTAAAAAGC+GGG | - | chr3.3:49393940-49393959 | None:intergenic | 55.0% | |
| GGTCAATGCGGGCAAAAAGC+GGG | - | chr3.3:49393961-49393980 | None:intergenic | 55.0% | |
| TCCACTGATGCTGCCTCACA+AGG | + | chr3.3:49394728-49394747 | MS.gene08078:CDS | 55.0% | |
| TCCTGTTGTGCTGCCTTGTG+AGG | - | chr3.3:49394744-49394763 | None:intergenic | 55.0% | |
| TCGGTTGGAGCTTCATGCTC+CGG | - | chr3.3:49394767-49394786 | None:intergenic | 55.0% | |
| TGCTTCCTCCGCAAGGATGT+TGG | - | chr3.3:49394277-49394296 | None:intergenic | 55.0% | |
| TTTCCCCAACATCCTTGCGG+AGG | + | chr3.3:49394269-49394288 | MS.gene08078:CDS | 55.0% | |
| ! | ACCGCGCCGCGTCAATTTTT+GGG | - | chr3.3:49393225-49393244 | None:intergenic | 55.0% |
| ! | CTTTTGCCTAACGCGCGACT+CGG | + | chr3.3:49394015-49394034 | MS.gene08078:intron | 55.0% |
| ! | TACCGCGCCGCGTCAATTTT+TGG | - | chr3.3:49393226-49393245 | None:intergenic | 55.0% |
| AATTGACGCGGCGCGGTAAG+CGG | + | chr3.3:49393228-49393247 | MS.gene08078:intron | 60.0% | |
| CCCCAAAAATTGACGCGGCG+CGG | + | chr3.3:49393221-49393240 | MS.gene08078:intron | 60.0% | |
| GCCTCACAAGGCAGCACAAC+AGG | + | chr3.3:49394740-49394759 | MS.gene08078:CDS | 60.0% | |
| GCCTTGTGAGGCAGCATCAG+TGG | - | chr3.3:49394732-49394751 | None:intergenic | 60.0% | |
| GGATCTACGACACCCCATGC+AGG | + | chr3.3:49394538-49394557 | MS.gene08078:intron | 60.0% | |
| GGCAAAAAGCGGGTCAACGC+GGG | - | chr3.3:49393951-49393970 | None:intergenic | 60.0% | |
| GGGCAAAAAGCGGGTCAACG+CGG | - | chr3.3:49393952-49393971 | None:intergenic | 60.0% | |
| GGGTCAACGCGGGCAAAAAG+CGG | - | chr3.3:49393983-49394002 | None:intergenic | 60.0% | |
| GGTCAACGCGGGCAAAAAGC+GGG | - | chr3.3:49393982-49394001 | None:intergenic | 60.0% | |
| TGACATGGGTGCGTGTGCCA+CGG | + | chr3.3:49391414-49391433 | MS.gene08078:intron | 60.0% | |
| ! | CCGCGCCGCGTCAATTTTTG+GGG | - | chr3.3:49393224-49393243 | None:intergenic | 60.0% |
| ! | GCGGGCGCTTTTACATGACG+CGG | + | chr3.3:49393258-49393277 | MS.gene08078:intron | 60.0% |
| !! | CGCCGCGTCAATTTTTGGGG+TGG | - | chr3.3:49393221-49393240 | None:intergenic | 60.0% |
| !! | GCAGTGTTGCTTCCTCCGCA+AGG | - | chr3.3:49394284-49394303 | None:intergenic | 60.0% |
| AACCCTAGGAGGGACGTCGG+AGG | - | chr3.3:49390242-49390261 | None:intergenic | 65.0% | |
| ATTGACGCGGCGCGGTAAGC+GGG | + | chr3.3:49393229-49393248 | MS.gene08078:intron | 65.0% | |
| CACGCACCCATGTCAGGCAG+AGG | - | chr3.3:49391409-49391428 | None:intergenic | 65.0% | |
| CTAGGAGGGACGTCGGAGGA+GGG | - | chr3.3:49390238-49390257 | None:intergenic | 65.0% | |
| CTCCTCCGACGTCCCTCCTA+GGG | + | chr3.3:49390237-49390256 | MS.gene08078:intron | 65.0% | |
| GGCAGCATCAGTGGACCCTG+TGG | - | chr3.3:49394723-49394742 | None:intergenic | 65.0% | |
| GTCAAAGCGGAAACGCGGCG+CGG | + | chr3.3:49393190-49393209 | MS.gene08078:intron | 65.0% | |
| GTCGGAGGAGGGATCTGGTG+CGG | - | chr3.3:49390227-49390246 | None:intergenic | 65.0% | |
| GTGGCACACGCACCCATGTC+AGG | - | chr3.3:49391415-49391434 | None:intergenic | 65.0% | |
| ! | GATCTGGTGCGGAGGAGCGT+CGG | - | chr3.3:49390216-49390235 | None:intergenic | 65.0% |
| ACGCGACCGAGTCGCGCGTT+AGG | - | chr3.3:49394024-49394043 | None:intergenic | 70.0% | |
| CCTAGGAGGGACGTCGGAGG+AGG | - | chr3.3:49390239-49390258 | None:intergenic | 70.0% | |
| CCTCCTCCGACGTCCCTCCT+AGG | + | chr3.3:49390236-49390255 | MS.gene08078:intron | 70.0% | |
| CGGTCGCGTTCTGACGCGCT+AGG | + | chr3.3:49394035-49394054 | MS.gene08078:intron | 70.0% | |
| GGAGGAGGGATCTGGTGCGG+AGG | - | chr3.3:49390224-49390243 | None:intergenic | 70.0% | |
| GGGACGTCGGAGGAGGGATC+TGG | - | chr3.3:49390232-49390251 | None:intergenic | 70.0% | |
| GGTCTAACGCGGCGCGATCG+CGG | - | chr3.3:49394081-49394100 | None:intergenic | 70.0% | |
| ! | AACGCGGCGCGATCGCGGCG+CGG | - | chr3.3:49394076-49394095 | None:intergenic | 80.0% |
| ! | AGCGGAAACGCGGCGCGGCG+CGG | + | chr3.3:49393195-49393214 | MS.gene08078:intron | 80.0% |
| ! | CGCGGTAAGCGGGCGCGACG+CGG | + | chr3.3:49393239-49393258 | MS.gene08078:intron | 80.0% |
| ! | GCGGTAAGCGGGCGCGACGC+GGG | + | chr3.3:49393240-49393259 | MS.gene08078:intron | 80.0% |
| ! | GGCGCGATCGCGGCGCGGAG+CGG | - | chr3.3:49394071-49394090 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 49390172 | 49394883 | 49390172 | ID=MS.gene08078 |
| chr3.3 | mRNA | 49390172 | 49394883 | 49390172 | ID=MS.gene08078.t1;Parent=MS.gene08078 |
| chr3.3 | exon | 49390172 | 49390246 | 49390172 | ID=MS.gene08078.t1.exon1;Parent=MS.gene08078.t1 |
| chr3.3 | CDS | 49390172 | 49390246 | 49390172 | ID=cds.MS.gene08078.t1;Parent=MS.gene08078.t1 |
| chr3.3 | exon | 49390879 | 49391193 | 49390879 | ID=MS.gene08078.t1.exon2;Parent=MS.gene08078.t1 |
| chr3.3 | CDS | 49390879 | 49391193 | 49390879 | ID=cds.MS.gene08078.t1;Parent=MS.gene08078.t1 |
| chr3.3 | exon | 49391816 | 49392017 | 49391816 | ID=MS.gene08078.t1.exon3;Parent=MS.gene08078.t1 |
| chr3.3 | CDS | 49391816 | 49392017 | 49391816 | ID=cds.MS.gene08078.t1;Parent=MS.gene08078.t1 |
| chr3.3 | exon | 49394214 | 49394442 | 49394214 | ID=MS.gene08078.t1.exon4;Parent=MS.gene08078.t1 |
| chr3.3 | CDS | 49394214 | 49394442 | 49394214 | ID=cds.MS.gene08078.t1;Parent=MS.gene08078.t1 |
| chr3.3 | exon | 49394622 | 49394883 | 49394622 | ID=MS.gene08078.t1.exon5;Parent=MS.gene08078.t1 |
| chr3.3 | CDS | 49394622 | 49394883 | 49394622 | ID=cds.MS.gene08078.t1;Parent=MS.gene08078.t1 |
| Gene Sequence |
| Protein sequence |
