Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08082.t1 | XP_003600475.1 | 97.6 | 254 | 6 | 0 | 12 | 265 | 6 | 259 | 2.10E-139 | 505 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08082.t1 | Q8C5Q4 | 34.8 | 224 | 107 | 5 | 64 | 250 | 250 | 471 | 2.0e-24 | 114.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08082.t1 | G7J263 | 97.6 | 254 | 6 | 0 | 12 | 265 | 6 | 259 | 1.5e-139 | 505.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene08082 | MS.gene60814 | PPI |
| MS.gene08082 | MS.gene006028 | PPI |
| MS.gene08082 | MS.gene33973 | PPI |
| MS.gene08082 | MS.gene041727 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08082.t1 | MTR_3g061590 | 97.638 | 254 | 6 | 0 | 12 | 265 | 6 | 259 | 0.0 | 508 |
| MS.gene08082.t1 | MTR_8g073580 | 50.980 | 255 | 113 | 4 | 18 | 265 | 40 | 289 | 2.81e-74 | 228 |
| MS.gene08082.t1 | MTR_8g073580 | 53.110 | 209 | 87 | 3 | 64 | 265 | 38 | 242 | 2.17e-71 | 219 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08082.t1 | AT3G20890 | 60.554 | 289 | 76 | 4 | 13 | 265 | 6 | 292 | 3.53e-108 | 315 |
| MS.gene08082.t1 | AT3G20890 | 57.635 | 203 | 53 | 1 | 96 | 265 | 27 | 229 | 3.01e-77 | 234 |
| MS.gene08082.t1 | AT5G66010 | 49.587 | 242 | 109 | 5 | 16 | 253 | 10 | 242 | 6.54e-74 | 226 |
| MS.gene08082.t1 | AT5G66010 | 48.630 | 146 | 70 | 2 | 112 | 253 | 1 | 145 | 1.30e-43 | 145 |
Find 74 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGTGAAGGCTTCTGTGTTT+TGG | 0.182250 | 3.3:-49509608 | MS.gene08082:CDS |
| ATCCACATTGTAATGAATTC+AGG | 0.251651 | 3.3:-49509292 | MS.gene08082:CDS |
| TCATCCTTATTAGCAGAAAA+TGG | 0.345506 | 3.3:+49509358 | None:intergenic |
| AGATGGATTGTACATATAAC+TGG | 0.382208 | 3.3:+49509786 | None:intergenic |
| ACTTTGCTCTTCAAAGAAAC+AGG | 0.406141 | 3.3:-49509567 | MS.gene08082:CDS |
| TGCTAATAAGGATGACATAA+TGG | 0.410596 | 3.3:-49509350 | MS.gene08082:CDS |
| TCCGTCTCACCATGCGTTGA+AGG | 0.422533 | 3.3:+49509160 | None:intergenic |
| CTACAAGGCAGTTGCAAATG+AGG | 0.438613 | 3.3:-49509491 | MS.gene08082:CDS |
| CGCAGTCGAACAACAGGAAA+TGG | 0.442842 | 3.3:+49509730 | None:intergenic |
| AGACCGCGCAGTCGAACAAC+AGG | 0.447152 | 3.3:+49509724 | None:intergenic |
| CTTCATCATATGATTTAGCT+CGG | 0.461470 | 3.3:+49509428 | None:intergenic |
| TCTTCATTCTATGATTCCCC+TGG | 0.465549 | 3.3:-49509811 | MS.gene08082:CDS |
| ACCATCTGGGGAGGCTTATG+TGG | 0.470749 | 3.3:-49509263 | MS.gene08082:CDS |
| ATATGATGAAGGAAAAGATT+CGG | 0.489693 | 3.3:-49509416 | MS.gene08082:CDS |
| CTTCAAGGAGTATGTGTTGT+CGG | 0.500765 | 3.3:-49509323 | MS.gene08082:CDS |
| CACAGGAGTGTTGCGACTGA+GGG | 0.505697 | 3.3:-49509386 | MS.gene08082:CDS |
| ATGTACAATCCATCTCCATA+TGG | 0.508179 | 3.3:-49509778 | MS.gene08082:CDS |
| ACAGGAAATGGTGGAGGAGG+AGG | 0.509420 | 3.3:+49509742 | None:intergenic |
| CTCGGGGAGCACTATGACGA+GGG | 0.512824 | 3.3:+49509446 | None:intergenic |
| TCCACATTGTAATGAATTCA+GGG | 0.513953 | 3.3:-49509291 | MS.gene08082:CDS |
| TTCATCATATGATTTAGCTC+GGG | 0.517226 | 3.3:+49509429 | None:intergenic |
| CGAGCTAAATCATATGATGA+AGG | 0.518042 | 3.3:-49509427 | MS.gene08082:CDS |
| ATCAGTTTCAGTGCAATCAA+AGG | 0.523371 | 3.3:+49509699 | None:intergenic |
| TGGTGGTGATGGGCGTGAAA+TGG | 0.525727 | 3.3:-49509866 | MS.gene08082:CDS |
| AAATTTGCTGATGGTGGTGA+TGG | 0.527499 | 3.3:-49509877 | MS.gene08082:CDS |
| CCGTCTCACCATGCGTTGAA+GGG | 0.530469 | 3.3:+49509161 | None:intergenic |
| TGACATAATGGAGTTCTTCA+AGG | 0.535855 | 3.3:-49509338 | MS.gene08082:CDS |
| CCCTTCAACGCATGGTGAGA+CGG | 0.535909 | 3.3:-49509161 | MS.gene08082:CDS |
| GATGTGGCCGAGTTCTTCCA+TGG | 0.538399 | 3.3:-49509679 | MS.gene08082:CDS |
| GCAAAGGATAGAATGACGCT+TGG | 0.544787 | 3.3:-49509205 | MS.gene08082:CDS |
| CGTCATTCTATCCTTTGCCA+TGG | 0.545218 | 3.3:+49509210 | None:intergenic |
| TCAGTTTCAGTGCAATCAAA+GGG | 0.547953 | 3.3:+49509700 | None:intergenic |
| CAAAGGATAGAATGACGCTT+GGG | 0.551160 | 3.3:-49509204 | MS.gene08082:CDS |
| GGTTGGCTGACATATCCATA+TGG | 0.556296 | 3.3:+49509763 | None:intergenic |
| CAAAGAAACAGGCAGAACAT+AGG | 0.560049 | 3.3:-49509556 | MS.gene08082:CDS |
| TTCAGTAAATTTGCTGATGG+TGG | 0.563548 | 3.3:-49509883 | MS.gene08082:intron |
| CTGACATATCCATATGGAGA+TGG | 0.564910 | 3.3:+49509769 | None:intergenic |
| TGTACATATAACTGGAACCA+GGG | 0.571227 | 3.3:+49509794 | None:intergenic |
| AGAGCAAAGTCAACTTGAAG+AGG | 0.573046 | 3.3:+49509580 | None:intergenic |
| ACAACAGGAAATGGTGGAGG+AGG | 0.573282 | 3.3:+49509739 | None:intergenic |
| TCCACATAAGCCTCCCCAGA+TGG | 0.579302 | 3.3:+49509262 | None:intergenic |
| GTCTAGACCATGGAAGAACT+CGG | 0.581671 | 3.3:+49509672 | None:intergenic |
| GAGCTATTCCCTTCAACGCA+TGG | 0.586026 | 3.3:-49509169 | MS.gene08082:CDS |
| CAAAACACAGAAGCCTTCAC+CGG | 0.588242 | 3.3:+49509609 | None:intergenic |
| TGATGATTCAAAAGCAGCCA+TGG | 0.593984 | 3.3:-49509227 | MS.gene08082:CDS |
| AATTTCAGTAAATTTGCTGA+TGG | 0.594224 | 3.3:-49509886 | MS.gene08082:intron |
| ACACAGGAGTGTTGCGACTG+AGG | 0.596079 | 3.3:-49509387 | MS.gene08082:CDS |
| TCATCATATGATTTAGCTCG+GGG | 0.596516 | 3.3:+49509430 | None:intergenic |
| TTCAAAAGCAGCCATGGCAA+AGG | 0.597698 | 3.3:-49509221 | MS.gene08082:CDS |
| CGAACAACAGGAAATGGTGG+AGG | 0.604157 | 3.3:+49509736 | None:intergenic |
| GAAATGGTGGAGGAGGAGGT+TGG | 0.608351 | 3.3:+49509746 | None:intergenic |
| TGATTGCACTGAAACTGATG+TGG | 0.609327 | 3.3:-49509695 | MS.gene08082:CDS |
| ACGGAAGATGCAATTTCAAG+AGG | 0.618509 | 3.3:-49509142 | MS.gene08082:CDS |
| AAAGATTCGGCTGAGCACAC+AGG | 0.623512 | 3.3:-49509403 | MS.gene08082:CDS |
| ACGTCAGCGGACAGTTGACG+CGG | 0.625189 | 3.3:-49509836 | MS.gene08082:CDS |
| AAGATGCAATTTCAAGAGGA+CGG | 0.628738 | 3.3:-49509138 | MS.gene08082:CDS |
| AATTTGCTGATGGTGGTGAT+GGG | 0.635503 | 3.3:-49509876 | MS.gene08082:CDS |
| TTTCCTGTTGTTCGACTGCG+CGG | 0.636494 | 3.3:-49509727 | MS.gene08082:CDS |
| TAAGAGGCAGGAATACTACA+AGG | 0.645116 | 3.3:-49509506 | MS.gene08082:CDS |
| GCTCGGGGAGCACTATGACG+AGG | 0.653439 | 3.3:+49509445 | None:intergenic |
| CAAGGAGTATGTGTTGTCGG+AGG | 0.654683 | 3.3:-49509320 | MS.gene08082:CDS |
| CCCCTGAATTCATTACAATG+TGG | 0.658546 | 3.3:+49509290 | None:intergenic |
| CGTCAGCGGACAGTTGACGC+GGG | 0.660169 | 3.3:-49509835 | MS.gene08082:CDS |
| TTGTACATATAACTGGAACC+AGG | 0.660817 | 3.3:+49509793 | None:intergenic |
| CATCAACTATGTCTAGACCA+TGG | 0.660852 | 3.3:+49509662 | None:intergenic |
| CACATTGTAATGAATTCAGG+GGG | 0.663594 | 3.3:-49509289 | MS.gene08082:CDS |
| AGTCGAACAACAGGAAATGG+TGG | 0.675557 | 3.3:+49509733 | None:intergenic |
| CCACATTGTAATGAATTCAG+GGG | 0.677967 | 3.3:-49509290 | MS.gene08082:CDS |
| ACAGGAGTGTTGCGACTGAG+GGG | 0.684610 | 3.3:-49509385 | MS.gene08082:CDS |
| TCGGGGAGCACTATGACGAG+GGG | 0.689760 | 3.3:+49509447 | None:intergenic |
| AATGAGGTTTCAGATGCTCG+AGG | 0.692222 | 3.3:-49509475 | MS.gene08082:CDS |
| AAATGGCTTCAAAACGTCAG+CGG | 0.695070 | 3.3:-49509849 | MS.gene08082:CDS |
| GAGGTTTCAGATGCTCGAGG+CGG | 0.695093 | 3.3:-49509472 | MS.gene08082:CDS |
| GTACATATAACTGGAACCAG+GGG | 0.705619 | 3.3:+49509795 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ATATGATGAAGGAAAAGATT+CGG | - | chr3.3:49509706-49509725 | MS.gene08082:CDS | 25.0% |
| !! | ATTACCATTTTCTGCTAATA+AGG | - | chr3.3:49509760-49509779 | MS.gene08082:CDS | 25.0% |
| !!! | AAGCTTATTGACTTCAATTT+TGG | - | chr3.3:49509202-49509221 | MS.gene08082:CDS | 25.0% |
| !!! | AATTTCAGTAAATTTGCTGA+TGG | - | chr3.3:49509236-49509255 | MS.gene08082:CDS | 25.0% |
| ATCCACATTGTAATGAATTC+AGG | - | chr3.3:49509830-49509849 | MS.gene08082:CDS | 30.0% | |
| CTTCATCATATGATTTAGCT+CGG | + | chr3.3:49509697-49509716 | None:intergenic | 30.0% | |
| GACATAAGTTTAAGTACTCT+AGG | + | chr3.3:49509164-49509183 | None:intergenic | 30.0% | |
| TCATCCTTATTAGCAGAAAA+TGG | + | chr3.3:49509767-49509786 | None:intergenic | 30.0% | |
| TCCACATTGTAATGAATTCA+GGG | - | chr3.3:49509831-49509850 | MS.gene08082:CDS | 30.0% | |
| TGCTAATAAGGATGACATAA+TGG | - | chr3.3:49509772-49509791 | MS.gene08082:CDS | 30.0% | |
| ! | GATGTTCTTTTTGTTCACAA+AGG | - | chr3.3:49509479-49509498 | MS.gene08082:CDS | 30.0% |
| ! | TTCATCATATGATTTAGCTC+GGG | + | chr3.3:49509696-49509715 | None:intergenic | 30.0% |
| ! | TTGAAGTTTTCAGAAGTAAG+AGG | - | chr3.3:49509600-49509619 | MS.gene08082:CDS | 30.0% |
| !! | AGATGGATTGTACATATAAC+TGG | + | chr3.3:49509339-49509358 | None:intergenic | 30.0% |
| AAGATGCAATTTCAAGAGGA+CGG | - | chr3.3:49509984-49510003 | MS.gene08082:CDS | 35.0% | |
| ACTTTGCTCTTCAAAGAAAC+AGG | - | chr3.3:49509555-49509574 | MS.gene08082:CDS | 35.0% | |
| ATCAGTTTCAGTGCAATCAA+AGG | + | chr3.3:49509426-49509445 | None:intergenic | 35.0% | |
| ATGTACAATCCATCTCCATA+TGG | - | chr3.3:49509344-49509363 | MS.gene08082:CDS | 35.0% | |
| CACATTGTAATGAATTCAGG+GGG | - | chr3.3:49509833-49509852 | MS.gene08082:CDS | 35.0% | |
| CCACATTGTAATGAATTCAG+GGG | - | chr3.3:49509832-49509851 | MS.gene08082:CDS | 35.0% | |
| CGAGCTAAATCATATGATGA+AGG | - | chr3.3:49509695-49509714 | MS.gene08082:CDS | 35.0% | |
| TCAGTTTCAGTGCAATCAAA+GGG | + | chr3.3:49509425-49509444 | None:intergenic | 35.0% | |
| TGTACATATAACTGGAACCA+GGG | + | chr3.3:49509331-49509350 | None:intergenic | 35.0% | |
| TTGTACATATAACTGGAACC+AGG | + | chr3.3:49509332-49509351 | None:intergenic | 35.0% | |
| ! | GTTCTTTTTGTTCACAAAGG+TGG | - | chr3.3:49509482-49509501 | MS.gene08082:CDS | 35.0% |
| ! | TCATCATATGATTTAGCTCG+GGG | + | chr3.3:49509695-49509714 | None:intergenic | 35.0% |
| ! | TGACATAATGGAGTTCTTCA+AGG | - | chr3.3:49509784-49509803 | MS.gene08082:CDS | 35.0% |
| !! | TTCAGTAAATTTGCTGATGG+TGG | - | chr3.3:49509239-49509258 | MS.gene08082:CDS | 35.0% |
| AAATGGCTTCAAAACGTCAG+CGG | - | chr3.3:49509273-49509292 | MS.gene08082:CDS | 40.0% | |
| ACGGAAGATGCAATTTCAAG+AGG | - | chr3.3:49509980-49509999 | MS.gene08082:CDS | 40.0% | |
| AGAGCAAAGTCAACTTGAAG+AGG | + | chr3.3:49509545-49509564 | None:intergenic | 40.0% | |
| CAAAGAAACAGGCAGAACAT+AGG | - | chr3.3:49509566-49509585 | MS.gene08082:CDS | 40.0% | |
| CAAAGGATAGAATGACGCTT+GGG | - | chr3.3:49509918-49509937 | MS.gene08082:intron | 40.0% | |
| CATCAACTATGTCTAGACCA+TGG | + | chr3.3:49509463-49509482 | None:intergenic | 40.0% | |
| CCCCTGAATTCATTACAATG+TGG | + | chr3.3:49509835-49509854 | None:intergenic | 40.0% | |
| CTGACATATCCATATGGAGA+TGG | + | chr3.3:49509356-49509375 | None:intergenic | 40.0% | |
| GTACATATAACTGGAACCAG+GGG | + | chr3.3:49509330-49509349 | None:intergenic | 40.0% | |
| TAAGAGGCAGGAATACTACA+AGG | - | chr3.3:49509616-49509635 | MS.gene08082:CDS | 40.0% | |
| TCTTCATTCTATGATTCCCC+TGG | - | chr3.3:49509311-49509330 | MS.gene08082:CDS | 40.0% | |
| TGATGATTCAAAAGCAGCCA+TGG | - | chr3.3:49509895-49509914 | MS.gene08082:intron | 40.0% | |
| TGATTGCACTGAAACTGATG+TGG | - | chr3.3:49509427-49509446 | MS.gene08082:CDS | 40.0% | |
| ! | AGTTTTCAGAAGTAAGAGGC+AGG | - | chr3.3:49509604-49509623 | MS.gene08082:CDS | 40.0% |
| ! | CTTCAAGGAGTATGTGTTGT+CGG | - | chr3.3:49509799-49509818 | MS.gene08082:CDS | 40.0% |
| !! | AAATTTGCTGATGGTGGTGA+TGG | - | chr3.3:49509245-49509264 | MS.gene08082:CDS | 40.0% |
| !! | AATTTGCTGATGGTGGTGAT+GGG | - | chr3.3:49509246-49509265 | MS.gene08082:CDS | 40.0% |
| AATGAGGTTTCAGATGCTCG+AGG | - | chr3.3:49509647-49509666 | MS.gene08082:CDS | 45.0% | |
| AGTCGAACAACAGGAAATGG+TGG | + | chr3.3:49509392-49509411 | None:intergenic | 45.0% | |
| CAAAACACAGAAGCCTTCAC+CGG | + | chr3.3:49509516-49509535 | None:intergenic | 45.0% | |
| CGTCATTCTATCCTTTGCCA+TGG | + | chr3.3:49509915-49509934 | None:intergenic | 45.0% | |
| CTACAAGGCAGTTGCAAATG+AGG | - | chr3.3:49509631-49509650 | MS.gene08082:CDS | 45.0% | |
| GCAAAGGATAGAATGACGCT+TGG | - | chr3.3:49509917-49509936 | MS.gene08082:intron | 45.0% | |
| GTCTAGACCATGGAAGAACT+CGG | + | chr3.3:49509453-49509472 | None:intergenic | 45.0% | |
| TTCAAAAGCAGCCATGGCAA+AGG | - | chr3.3:49509901-49509920 | MS.gene08082:intron | 45.0% | |
| ! | CACAAAGGTGGCAAGTTTTC+CGG | - | chr3.3:49509494-49509513 | MS.gene08082:CDS | 45.0% |
| ! | GGTGAAGGCTTCTGTGTTTT+GGG | - | chr3.3:49509515-49509534 | MS.gene08082:CDS | 45.0% |
| ! | GGTTGGCTGACATATCCATA+TGG | + | chr3.3:49509362-49509381 | None:intergenic | 45.0% |
| AAAGATTCGGCTGAGCACAC+AGG | - | chr3.3:49509719-49509738 | MS.gene08082:CDS | 50.0% | |
| AATTCAGGGGGAAGACCATC+TGG | - | chr3.3:49509845-49509864 | MS.gene08082:CDS | 50.0% | |
| ATTCAGGGGGAAGACCATCT+GGG | - | chr3.3:49509846-49509865 | MS.gene08082:CDS | 50.0% | |
| CGAACAACAGGAAATGGTGG+AGG | + | chr3.3:49509389-49509408 | None:intergenic | 50.0% | |
| CGCAGTCGAACAACAGGAAA+TGG | + | chr3.3:49509395-49509414 | None:intergenic | 50.0% | |
| GAGCTATTCCCTTCAACGCA+TGG | - | chr3.3:49509953-49509972 | MS.gene08082:intron | 50.0% | |
| TTTCCTGTTGTTCGACTGCG+CGG | - | chr3.3:49509395-49509414 | MS.gene08082:CDS | 50.0% | |
| ! | ACAACAGGAAATGGTGGAGG+AGG | + | chr3.3:49509386-49509405 | None:intergenic | 50.0% |
| ! | CAAGGAGTATGTGTTGTCGG+AGG | - | chr3.3:49509802-49509821 | MS.gene08082:CDS | 50.0% |
| ! | CGGTGAAGGCTTCTGTGTTT+TGG | - | chr3.3:49509514-49509533 | MS.gene08082:CDS | 50.0% |
| ACCATCTGGGGAGGCTTATG+TGG | - | chr3.3:49509859-49509878 | MS.gene08082:CDS | 55.0% | |
| CCCTTCAACGCATGGTGAGA+CGG | - | chr3.3:49509961-49509980 | MS.gene08082:intron | 55.0% | |
| CCGTCTCACCATGCGTTGAA+GGG | + | chr3.3:49509964-49509983 | None:intergenic | 55.0% | |
| GAGGTTTCAGATGCTCGAGG+CGG | - | chr3.3:49509650-49509669 | MS.gene08082:CDS | 55.0% | |
| GATGTGGCCGAGTTCTTCCA+TGG | - | chr3.3:49509443-49509462 | MS.gene08082:CDS | 55.0% | |
| TCCACATAAGCCTCCCCAGA+TGG | + | chr3.3:49509863-49509882 | None:intergenic | 55.0% | |
| TCCGTCTCACCATGCGTTGA+AGG | + | chr3.3:49509965-49509984 | None:intergenic | 55.0% | |
| TTCAGGGGGAAGACCATCTG+GGG | - | chr3.3:49509847-49509866 | MS.gene08082:CDS | 55.0% | |
| ! | ACAGGAAATGGTGGAGGAGG+AGG | + | chr3.3:49509383-49509402 | None:intergenic | 55.0% |
| ! | GAAATGGTGGAGGAGGAGGT+TGG | + | chr3.3:49509379-49509398 | None:intergenic | 55.0% |
| ! | GGTGGCAAGTTTTCCGGTGA+AGG | - | chr3.3:49509500-49509519 | MS.gene08082:CDS | 55.0% |
| !! | ACACAGGAGTGTTGCGACTG+AGG | - | chr3.3:49509735-49509754 | MS.gene08082:CDS | 55.0% |
| !! | ACAGGAGTGTTGCGACTGAG+GGG | - | chr3.3:49509737-49509756 | MS.gene08082:CDS | 55.0% |
| !! | CACAGGAGTGTTGCGACTGA+GGG | - | chr3.3:49509736-49509755 | MS.gene08082:CDS | 55.0% |
| !! | TGGTGGTGATGGGCGTGAAA+TGG | - | chr3.3:49509256-49509275 | MS.gene08082:CDS | 55.0% |
| ACGTCAGCGGACAGTTGACG+CGG | - | chr3.3:49509286-49509305 | MS.gene08082:CDS | 60.0% | |
| AGACCGCGCAGTCGAACAAC+AGG | + | chr3.3:49509401-49509420 | None:intergenic | 60.0% | |
| !! | CTCGGGGAGCACTATGACGA+GGG | + | chr3.3:49509679-49509698 | None:intergenic | 60.0% |
| !! | TCGGGGAGCACTATGACGAG+GGG | + | chr3.3:49509678-49509697 | None:intergenic | 60.0% |
| AGGGGGAAGACCATCTGGGG+AGG | - | chr3.3:49509850-49509869 | MS.gene08082:CDS | 65.0% | |
| CGTCAGCGGACAGTTGACGC+GGG | - | chr3.3:49509287-49509306 | MS.gene08082:CDS | 65.0% | |
| !! | GCTCGGGGAGCACTATGACG+AGG | + | chr3.3:49509680-49509699 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 49509135 | 49510009 | 49509135 | ID=MS.gene08082 |
| chr3.3 | mRNA | 49509135 | 49510009 | 49509135 | ID=MS.gene08082.t1;Parent=MS.gene08082 |
| chr3.3 | exon | 49509978 | 49510009 | 49509978 | ID=MS.gene08082.t1.exon1;Parent=MS.gene08082.t1 |
| chr3.3 | CDS | 49509978 | 49510009 | 49509978 | ID=cds.MS.gene08082.t1;Parent=MS.gene08082.t1 |
| chr3.3 | exon | 49509135 | 49509900 | 49509135 | ID=MS.gene08082.t1.exon2;Parent=MS.gene08082.t1 |
| chr3.3 | CDS | 49509135 | 49509900 | 49509135 | ID=cds.MS.gene08082.t1;Parent=MS.gene08082.t1 |
| Gene Sequence |
| Protein sequence |
