Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08692.t1 | XP_003606369.2 | 98.2 | 936 | 17 | 0 | 1 | 936 | 1 | 936 | 0.00E+00 | 1874 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08692.t1 | G7JND6 | 98.2 | 936 | 17 | 0 | 1 | 936 | 1 | 936 | 0.0e+00 | 1874.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049281 | MS.gene08692 | 0.802206 | 6.26E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene08692 | 0.800841 | 1.19E-48 | -1.69E-46 |
| MS.gene050129 | MS.gene08692 | 0.87574 | 2.43E-68 | -1.69E-46 |
| MS.gene056550 | MS.gene08692 | 0.803471 | 3.43E-49 | -1.69E-46 |
| MS.gene056761 | MS.gene08692 | 0.801298 | 9.62E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08692.t1 | MTR_4g058760 | 98.184 | 936 | 17 | 0 | 1 | 936 | 1 | 936 | 0.0 | 1922 |
| MS.gene08692.t1 | MTR_8g023050 | 27.795 | 331 | 189 | 10 | 592 | 888 | 52 | 366 | 7.92e-30 | 126 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08692.t1 | AT5G60700 | 80.192 | 939 | 176 | 4 | 1 | 936 | 1 | 932 | 0.0 | 1573 |
| MS.gene08692.t1 | AT5G60700 | 86.228 | 668 | 92 | 0 | 269 | 936 | 1 | 668 | 0.0 | 1218 |
| MS.gene08692.t1 | AT5G12260 | 30.597 | 268 | 147 | 10 | 605 | 846 | 73 | 327 | 1.53e-27 | 119 |
Find 156 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGCTTGGTTTGGAAAATT+TGG | 0.065005 | 4.4:+44906660 | None:intergenic |
| CCCCATGTTTCTTTGTCTTT+TGG | 0.116342 | 4.4:+44908414 | None:intergenic |
| CCATCTTCAGATGACAATTT+TGG | 0.116513 | 4.4:-44907098 | MS.gene08692:CDS |
| AAAGAAAATGTTGGAGATTT+TGG | 0.133809 | 4.4:-44909919 | MS.gene08692:CDS |
| CTTCTGTGTCTAAAGTTATT+TGG | 0.177954 | 4.4:-44907849 | MS.gene08692:CDS |
| TTAGGTGTTGGTTCAATTTC+CGG | 0.192943 | 4.4:-44908054 | MS.gene08692:CDS |
| TTTGGTTATTGTTGTCTTCT+TGG | 0.220951 | 4.4:+44910432 | None:intergenic |
| CAACCATTTGTTCTTGATTT+CGG | 0.225293 | 4.4:+44906747 | None:intergenic |
| TTGACAACTTCAACAATTCT+TGG | 0.227499 | 4.4:+44906948 | None:intergenic |
| TAAAACTCTCTCCAATGTTT+AGG | 0.235717 | 4.4:+44906825 | None:intergenic |
| CGGTTTAAGATCTTTGATTT+AGG | 0.251865 | 4.4:-44908072 | MS.gene08692:CDS |
| AGGGAGATGGAAGAGAGTTC+TGG | 0.270847 | 4.4:+44906978 | None:intergenic |
| GAATTGTTGTTGCTTGAATT+TGG | 0.273305 | 4.4:+44910414 | None:intergenic |
| TTAGTGAATTTACCCTGTTT+TGG | 0.274450 | 4.4:+44907315 | None:intergenic |
| CAATCAAGCTGTTTCTCTTA+AGG | 0.280030 | 4.4:-44906469 | MS.gene08692:CDS |
| TGTGGTTAAGCATAATAAAA+TGG | 0.289497 | 4.4:-44906586 | MS.gene08692:CDS |
| AAAGTATAAGAATTCTGTTT+TGG | 0.290647 | 4.4:-44909877 | MS.gene08692:CDS |
| CAAATTTGGGTGCTTTCGTT+CGG | 0.309065 | 4.4:-44910107 | MS.gene08692:CDS |
| GAATACACTGCTTGTATAAC+TGG | 0.310239 | 4.4:+44908012 | None:intergenic |
| AGCTCTCAAATGGCCTCTTT+TGG | 0.312366 | 4.4:-44908109 | MS.gene08692:CDS |
| CAACAATTCTTGGTGTGTAT+AGG | 0.312888 | 4.4:+44906958 | None:intergenic |
| TCACCAGTTGAGAAGGTAAA+AGG | 0.315759 | 4.4:+44909654 | None:intergenic |
| AACAATTCTTGGTGTGTATA+GGG | 0.318766 | 4.4:+44906959 | None:intergenic |
| AATCAAGCTGTTTCTCTTAA+GGG | 0.319362 | 4.4:-44906468 | MS.gene08692:CDS |
| CTCTTGAGGGACGCCTCGTT+TGG | 0.323081 | 4.4:+44910080 | None:intergenic |
| TAGGTGTTGGTTCAATTTCC+GGG | 0.324598 | 4.4:-44908053 | MS.gene08692:CDS |
| TTTGCAGACAGAAGCTGATT+TGG | 0.331055 | 4.4:-44909973 | MS.gene08692:CDS |
| AAAACTCTCTCCAATGTTTA+GGG | 0.348787 | 4.4:+44906826 | None:intergenic |
| CTTGATTTCGGAATTTGAAC+CGG | 0.360455 | 4.4:+44906759 | None:intergenic |
| TTCATCAATTACCTTGTAGT+TGG | 0.366831 | 4.4:-44906863 | MS.gene08692:CDS |
| TCATCAATTACCTTGTAGTT+GGG | 0.371809 | 4.4:-44906862 | MS.gene08692:CDS |
| GGGAGATGGAAGAGAGTTCT+GGG | 0.371894 | 4.4:+44906979 | None:intergenic |
| GACTTAAATTTCCTATAACT+TGG | 0.376357 | 4.4:+44909807 | None:intergenic |
| TTGATCCATAGGTAGTAATA+AGG | 0.377040 | 4.4:+44907044 | None:intergenic |
| TGAGAGAAGATGCAGCTTCT+TGG | 0.384331 | 4.4:+44910456 | None:intergenic |
| CAAATGGTTGGCAAGCTTCA+TGG | 0.386635 | 4.4:-44906734 | MS.gene08692:CDS |
| CTATCCATGTTGAAAGTGAT+TGG | 0.388496 | 4.4:+44907242 | None:intergenic |
| TGTGCAATTCTTGAGAAATC+TGG | 0.389282 | 4.4:+44910524 | None:intergenic |
| AAGATCTTTGATTTAGGTGT+TGG | 0.391823 | 4.4:-44908066 | MS.gene08692:CDS |
| TCAACATCATAACCCAAAAC+AGG | 0.393205 | 4.4:-44907328 | MS.gene08692:CDS |
| TATTCTGTCGCATTCCATTT+CGG | 0.393945 | 4.4:+44906918 | None:intergenic |
| AACTAGTAGGTTCATTTGAA+TGG | 0.394328 | 4.4:-44907196 | MS.gene08692:CDS |
| TGGACCTTTCAAATCCCATT+TGG | 0.397443 | 4.4:+44910232 | None:intergenic |
| GCTTCAGAAACTAATTCAAA+TGG | 0.399454 | 4.4:-44907898 | MS.gene08692:CDS |
| GCTTTCCACGATTCTCTTGA+GGG | 0.406469 | 4.4:+44910067 | None:intergenic |
| TGATGAAGGTAAGGTGTGTT+TGG | 0.414604 | 4.4:+44906879 | None:intergenic |
| TTTATCAATAGTGATATCAT+AGG | 0.415176 | 4.4:+44909752 | None:intergenic |
| CACTGTTGTTTCTGATACAT+AGG | 0.416197 | 4.4:+44908371 | None:intergenic |
| GAGAAACAGCTTGATTGAAA+AGG | 0.419242 | 4.4:+44906475 | None:intergenic |
| AATTCTTGAGAAATCTGGTT+TGG | 0.422536 | 4.4:+44910529 | None:intergenic |
| AGCACCCAAATTTGATGAAA+AGG | 0.424496 | 4.4:+44910116 | None:intergenic |
| CGTTCTTTGCAAACCAAAAG+AGG | 0.426034 | 4.4:+44908096 | None:intergenic |
| TAAAGCTGCTGGTGCTAAGT+TGG | 0.428332 | 4.4:-44906442 | MS.gene08692:CDS |
| TCCACAGTAATTACAACACT+TGG | 0.428866 | 4.4:+44907958 | None:intergenic |
| AGCAGTGTATTCTAGTTTGA+AGG | 0.435732 | 4.4:-44908001 | MS.gene08692:CDS |
| TAATGAACATGAAATCCAAA+TGG | 0.437665 | 4.4:-44910247 | MS.gene08692:CDS |
| AAAGCATACATTGTTGTCTC+TGG | 0.442855 | 4.4:-44908165 | MS.gene08692:CDS |
| GGCGAGAAGTGGAGATTCCT+TGG | 0.445610 | 4.4:-44910711 | MS.gene08692:CDS |
| TCTCACCTTATTACTACCTA+TGG | 0.445983 | 4.4:-44907049 | MS.gene08692:CDS |
| AATTTCATCTCCTAGATAGT+AGG | 0.446568 | 4.4:+44907265 | None:intergenic |
| GAGAAACTTGAGGGTCATAA+TGG | 0.449253 | 4.4:+44907003 | None:intergenic |
| CTCACCAATGCCTACTATCT+AGG | 0.449528 | 4.4:-44907275 | MS.gene08692:CDS |
| ATTGATATGATGTATTTAAG+AGG | 0.454107 | 4.4:-44906699 | MS.gene08692:CDS |
| AAATTTGGGTGCTTTCGTTC+GGG | 0.457205 | 4.4:-44910106 | MS.gene08692:CDS |
| GATATTGCCATTTAGACAAA+AGG | 0.460055 | 4.4:-44909841 | MS.gene08692:CDS |
| ATGATCACACCACACATTGT+AGG | 0.461395 | 4.4:-44910485 | MS.gene08692:CDS |
| TTGGTTCTTAAATCAATTGA+AGG | 0.462460 | 4.4:+44910548 | None:intergenic |
| CACTATTGATAAAATTGTGC+AGG | 0.462476 | 4.4:-44909742 | MS.gene08692:CDS |
| AATTTCCAAAACAAAACCAT+TGG | 0.462676 | 4.4:-44910290 | MS.gene08692:CDS |
| ATTCCGAAATCAAGAACAAA+TGG | 0.465756 | 4.4:-44906750 | MS.gene08692:CDS |
| AAGCTGCAGCAGCTCTCAAA+TGG | 0.469839 | 4.4:-44908119 | MS.gene08692:CDS |
| GTTGCTGTTGATCATCATAC+TGG | 0.470551 | 4.4:-44906381 | MS.gene08692:CDS |
| TTGAAGTGTCTCAGTTCCAA+TGG | 0.470919 | 4.4:+44910274 | None:intergenic |
| AAATTTAAGTCTAAAGAAGC+TGG | 0.471279 | 4.4:-44909795 | MS.gene08692:CDS |
| CCAAAATTGTCATCTGAAGA+TGG | 0.471890 | 4.4:+44907098 | None:intergenic |
| AAAGAGAGAGCTTTATGAAG+AGG | 0.472811 | 4.4:-44910318 | MS.gene08692:CDS |
| TGTGAGAAAGGCTTTGAAGA+TGG | 0.472901 | 4.4:-44907920 | MS.gene08692:CDS |
| AAAGCTGCTGGTGCTAAGTT+GGG | 0.474235 | 4.4:-44906441 | MS.gene08692:CDS |
| ATGTTGAATGACTATGTTGC+TGG | 0.474502 | 4.4:-44910683 | MS.gene08692:CDS |
| TGGTGGAAAGCACTTTCATC+TGG | 0.474973 | 4.4:-44908312 | MS.gene08692:CDS |
| GTACTATGGAAGGTTTCAAA+TGG | 0.475657 | 4.4:-44909997 | MS.gene08692:CDS |
| CTTCAAAAGTATAGAAATGC+AGG | 0.477205 | 4.4:-44908459 | MS.gene08692:CDS |
| GTGATATCATAGGCAGGATC+AGG | 0.479851 | 4.4:+44909762 | None:intergenic |
| GAAGGTAAGGTGTGTTTGGA+TGG | 0.481855 | 4.4:+44906883 | None:intergenic |
| TTGTCAAAGAAAGACCGAAA+TGG | 0.487112 | 4.4:-44906932 | MS.gene08692:CDS |
| CTTCAGAAACTAATTCAAAT+GGG | 0.487507 | 4.4:-44907897 | MS.gene08692:CDS |
| CTTAAGGGACTTAAAGCTGC+TGG | 0.489733 | 4.4:-44906453 | MS.gene08692:CDS |
| GAAGCAACCATAAAACTAGT+AGG | 0.492724 | 4.4:-44907209 | MS.gene08692:CDS |
| CAAGGTAATTGATGAAGGTA+AGG | 0.495150 | 4.4:+44906870 | None:intergenic |
| TGAGTGCATATTTGATCCAT+AGG | 0.502316 | 4.4:+44907033 | None:intergenic |
| AATGAACATGAAATCCAAAT+GGG | 0.502594 | 4.4:-44910246 | MS.gene08692:CDS |
| TTCAAGTACGCGATGATCAA+TGG | 0.502893 | 4.4:-44908332 | MS.gene08692:CDS |
| CTGGTGAAGATTTGCACCTC+AGG | 0.503101 | 4.4:-44909638 | MS.gene08692:intron |
| ATCTGGCTACATAACACAAT+GGG | 0.506007 | 4.4:-44908295 | MS.gene08692:CDS |
| TGTGTCTAAAGTTATTTGGA+TGG | 0.507245 | 4.4:-44907845 | MS.gene08692:CDS |
| CGAAATACGACGGCGAGAAG+TGG | 0.507540 | 4.4:-44910722 | MS.gene08692:CDS |
| CCAAATTTGATGAAAAGGTA+GGG | 0.511666 | 4.4:+44910121 | None:intergenic |
| GCATACATTGTTGTCTCTGG+TGG | 0.511913 | 4.4:-44908162 | MS.gene08692:CDS |
| CATCAATTACCTTGTAGTTG+GGG | 0.519801 | 4.4:-44906861 | MS.gene08692:CDS |
| TCATTCTCACAAACAAGAGA+TGG | 0.521795 | 4.4:+44910392 | None:intergenic |
| TGCTGGTGCTAAGTTGGGAC+AGG | 0.530192 | 4.4:-44906436 | MS.gene08692:CDS |
| CCCAAATTTGATGAAAAGGT+AGG | 0.530743 | 4.4:+44910120 | None:intergenic |
| AACTACAAGGTAATTGATGA+AGG | 0.532933 | 4.4:+44906865 | None:intergenic |
| ATCTCCTAGATAGTAGGCAT+TGG | 0.534319 | 4.4:+44907271 | None:intergenic |
| CTAAAATCATCCTTCAACAA+TGG | 0.535382 | 4.4:+44906552 | None:intergenic |
| AGCTTTCCACGATTCTCTTG+AGG | 0.537297 | 4.4:+44910066 | None:intergenic |
| GCAGTGTATTCTAGTTTGAA+GGG | 0.542949 | 4.4:-44908000 | MS.gene08692:CDS |
| TTGATTTCGGAATTTGAACC+GGG | 0.544807 | 4.4:+44906760 | None:intergenic |
| TATGTGCACCTGGTTCCATA+TGG | 0.547518 | 4.4:+44906625 | None:intergenic |
| TATTGATGTTAATGTGAGAA+AGG | 0.547988 | 4.4:-44907932 | MS.gene08692:CDS |
| GCTGCTGCAGCTTGTTCACA+AGG | 0.548041 | 4.4:+44908129 | None:intergenic |
| TGGAAAGCTATAACGATTCA+CGG | 0.548641 | 4.4:-44910052 | MS.gene08692:CDS |
| CTGCTCTTATGAGTCCACCT+TGG | 0.549152 | 4.4:+44907138 | None:intergenic |
| CAAATCTTCACCAGTTGAGA+AGG | 0.549226 | 4.4:+44909647 | None:intergenic |
| TAAGAGCAGTAAGTGAAAGT+TGG | 0.549354 | 4.4:-44907124 | MS.gene08692:CDS |
| GATGGTAATCTTGAAGCTGA+AGG | 0.550276 | 4.4:+44906504 | None:intergenic |
| TCTCAAGAATTGCACAACAA+TGG | 0.551342 | 4.4:-44910517 | MS.gene08692:CDS |
| TCTTGGTGTGTATAGGGAGA+TGG | 0.554912 | 4.4:+44906965 | None:intergenic |
| GTCATTCAACATTCCATCCA+AGG | 0.556417 | 4.4:+44910694 | None:intergenic |
| GTTCTGGGAGAGAAACTTGA+GGG | 0.559430 | 4.4:+44906994 | None:intergenic |
| AACACTGCTCCCCAACTACA+AGG | 0.561032 | 4.4:+44906852 | None:intergenic |
| TTGATATGATGTATTTAAGA+GGG | 0.562184 | 4.4:-44906698 | MS.gene08692:CDS |
| TCCAAAAGACAAAGAAACAT+GGG | 0.566745 | 4.4:-44908415 | MS.gene08692:CDS |
| TGATTGAAAAGGTTCAAAGA+TGG | 0.566992 | 4.4:+44906486 | None:intergenic |
| AGAAGTGGAGATTCCTTGGA+TGG | 0.567533 | 4.4:-44910707 | MS.gene08692:CDS |
| GATACCTGGAAAGAAAATGT+TGG | 0.567656 | 4.4:-44909928 | MS.gene08692:CDS |
| TCAATAGTGATATCATAGGC+AGG | 0.570472 | 4.4:+44909756 | None:intergenic |
| CGAAATCAAGAACAAATGGT+TGG | 0.570974 | 4.4:-44906746 | MS.gene08692:CDS |
| AAATCCAAATGGGATTTGAA+AGG | 0.575214 | 4.4:-44910236 | MS.gene08692:CDS |
| GTTGATGATGATATGATACC+TGG | 0.577017 | 4.4:-44909942 | MS.gene08692:CDS |
| TAATTCAAATGGGACTACAT+TGG | 0.578547 | 4.4:-44907887 | MS.gene08692:CDS |
| TCAACTAACCATATGGAACC+AGG | 0.589500 | 4.4:-44906633 | MS.gene08692:CDS |
| TTTATGTTTACATGAACATG+AGG | 0.594622 | 4.4:-44906806 | MS.gene08692:CDS |
| AATTCCAATCACTTTCAACA+TGG | 0.597469 | 4.4:-44907246 | MS.gene08692:CDS |
| AGTTCTGGGAGAGAAACTTG+AGG | 0.603063 | 4.4:+44906993 | None:intergenic |
| TTCGTTCGGGAGTCCAAACG+AGG | 0.604649 | 4.4:-44910093 | MS.gene08692:CDS |
| ATCCAAAAGACAAAGAAACA+TGG | 0.611454 | 4.4:-44908416 | MS.gene08692:CDS |
| CAGAATCTTGAGCAGTGATG+AGG | 0.612938 | 4.4:+44906354 | None:intergenic |
| CCACAGTAATTACAACACTT+GGG | 0.613515 | 4.4:+44907959 | None:intergenic |
| TTAGCACTAATATGTGCACC+TGG | 0.615984 | 4.4:+44906615 | None:intergenic |
| TGCCTCAGAGTTCGACACCC+CGG | 0.617245 | 4.4:+44908035 | None:intergenic |
| TGGTAATGTCCTACAATGTG+TGG | 0.620729 | 4.4:+44910476 | None:intergenic |
| GGTTCATTTGAATGGCCACA+TGG | 0.621803 | 4.4:-44907188 | MS.gene08692:CDS |
| AGGTGTTGGTTCAATTTCCG+GGG | 0.621941 | 4.4:-44908052 | MS.gene08692:CDS |
| TATTAGTGCTAAAGATAATG+TGG | 0.629617 | 4.4:-44906604 | MS.gene08692:CDS |
| CATCTGGCTACATAACACAA+TGG | 0.632893 | 4.4:-44908296 | MS.gene08692:CDS |
| CAACATCATAACCCAAAACA+GGG | 0.633195 | 4.4:-44907327 | MS.gene08692:CDS |
| ACTTTAGACACAGAAGCCCT+AGG | 0.637156 | 4.4:+44907856 | None:intergenic |
| CTAAGAAGAAGAATCATCCA+AGG | 0.647301 | 4.4:-44907155 | MS.gene08692:CDS |
| AAGTACGCGATGATCAATGG+TGG | 0.648183 | 4.4:-44908329 | MS.gene08692:CDS |
| ACAGGGTAAATTCACTAACA+AGG | 0.650361 | 4.4:-44907310 | MS.gene08692:CDS |
| GGCGTCCCTCAAGAGAATCG+TGG | 0.659434 | 4.4:-44910072 | MS.gene08692:CDS |
| AGAAGAAGAATCATCCAAGG+TGG | 0.677908 | 4.4:-44907152 | MS.gene08692:CDS |
| CCCAAGTGTTGTAATTACTG+TGG | 0.680116 | 4.4:-44907959 | MS.gene08692:CDS |
| TTCCGGGGTGTCGAACTCTG+AGG | 0.689190 | 4.4:-44908037 | MS.gene08692:CDS |
| CCAAAAGACAAAGAAACATG+GGG | 0.703653 | 4.4:-44908414 | MS.gene08692:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATAAAATAAAATTATA+GGG | + | chr4.4:44907604-44907623 | None:intergenic | 0.0% |
| !! | TATATATAAAATAAAATTAT+AGG | + | chr4.4:44907605-44907624 | None:intergenic | 0.0% |
| !!! | AATGATATATAACTAAATTT+TGG | - | chr4.4:44909351-44909370 | MS.gene08692:intron | 10.0% |
| !!! | AGATTTTCTATATTAAAATA+AGG | + | chr4.4:44908055-44908074 | None:intergenic | 10.0% |
| !! | TCATAAAATAAAATTGCATA+TGG | + | chr4.4:44907628-44907647 | None:intergenic | 15.0% |
| !!! | CATAAATGACATTTTTTTTT+TGG | + | chr4.4:44907672-44907691 | None:intergenic | 15.0% |
| !!! | CTATTAGATTATGTTTTAAT+CGG | + | chr4.4:44909603-44909622 | None:intergenic | 15.0% |
| !!! | TTTATTCAATTTTCATATGA+AGG | - | chr4.4:44908320-44908339 | MS.gene08692:CDS | 15.0% |
| !! | AAAAAATAGACTTTCTTACT+TGG | + | chr4.4:44909291-44909310 | None:intergenic | 20.0% |
| !! | ATCATATAATGATCTAACAA+TGG | - | chr4.4:44909387-44909406 | MS.gene08692:intron | 20.0% |
| !! | ATTGATATGATGTATTTAAG+AGG | - | chr4.4:44910388-44910407 | MS.gene08692:CDS | 20.0% |
| !! | TCAAAATAGTAAGTTTGTAT+CGG | + | chr4.4:44907993-44908012 | None:intergenic | 20.0% |
| !! | TGAAATTTACACATGTTAAT+AGG | + | chr4.4:44908017-44908036 | None:intergenic | 20.0% |
| !! | TTGATATGATGTATTTAAGA+GGG | - | chr4.4:44910389-44910408 | MS.gene08692:CDS | 20.0% |
| !! | TTTATCAATAGTGATATCAT+AGG | + | chr4.4:44907338-44907357 | None:intergenic | 20.0% |
| !!! | AAAGTATAAGAATTCTGTTT+TGG | - | chr4.4:44907210-44907229 | MS.gene08692:CDS | 20.0% |
| !!! | AACATTTTTATTGTACTACA+TGG | - | chr4.4:44906514-44906533 | MS.gene08692:CDS | 20.0% |
| !!! | AAGTATAAGAATTCTGTTTT+GGG | - | chr4.4:44907211-44907230 | MS.gene08692:CDS | 20.0% |
| !!! | ACATTTTTATTGTACTACAT+GGG | - | chr4.4:44906515-44906534 | MS.gene08692:CDS | 20.0% |
| !!! | ATTTTACTTTTCCAAGTTAT+AGG | - | chr4.4:44907269-44907288 | MS.gene08692:CDS | 20.0% |
| !!! | TGATAATTTTTTACATGTGT+TGG | - | chr4.4:44908511-44908530 | MS.gene08692:intron | 20.0% |
| !!! | TTCAACAAAACATTGATTTT+CGG | + | chr4.4:44906893-44906912 | None:intergenic | 20.0% |
| ! | AAATAAGTCATTGTTTGACT+TGG | + | chr4.4:44908163-44908182 | None:intergenic | 25.0% |
| ! | AAATTTAAGTCTAAAGAAGC+TGG | - | chr4.4:44907292-44907311 | MS.gene08692:CDS | 25.0% |
| ! | AAGTCAAACAATGACTTATT+TGG | - | chr4.4:44908162-44908181 | MS.gene08692:CDS | 25.0% |
| ! | AATGAACATGAAATCCAAAT+GGG | - | chr4.4:44906841-44906860 | MS.gene08692:CDS | 25.0% |
| ! | AATTTCCAAAACAAAACCAT+TGG | - | chr4.4:44906797-44906816 | MS.gene08692:CDS | 25.0% |
| ! | CACATGTAAAAAATTATCAC+TGG | + | chr4.4:44908510-44908529 | None:intergenic | 25.0% |
| ! | CTTCAGAAACTAATTCAAAT+GGG | - | chr4.4:44909190-44909209 | MS.gene08692:intron | 25.0% |
| ! | GACAAAAGGTCAAATATAAA+GGG | - | chr4.4:44907696-44907715 | MS.gene08692:intron | 25.0% |
| ! | GACTTAAATTTCCTATAACT+TGG | + | chr4.4:44907283-44907302 | None:intergenic | 25.0% |
| ! | TAATGAACATGAAATCCAAA+TGG | - | chr4.4:44906840-44906859 | MS.gene08692:CDS | 25.0% |
| ! | TATTAGTGCTAAAGATAATG+TGG | - | chr4.4:44910483-44910502 | MS.gene08692:CDS | 25.0% |
| ! | TATTGATGTTAATGTGAGAA+AGG | - | chr4.4:44909155-44909174 | MS.gene08692:intron | 25.0% |
| ! | TGACAAAAGGTCAAATATAA+AGG | - | chr4.4:44907695-44907714 | MS.gene08692:intron | 25.0% |
| ! | TGTGGTTAAGCATAATAAAA+TGG | - | chr4.4:44910501-44910520 | MS.gene08692:CDS | 25.0% |
| ! | TTTATGTTTACATGAACATG+AGG | - | chr4.4:44910281-44910300 | MS.gene08692:CDS | 25.0% |
| ! | TTTCACTACATTAAAGTAAG+TGG | + | chr4.4:44908098-44908117 | None:intergenic | 25.0% |
| !! | AAAGAAAATGTTGGAGATTT+TGG | - | chr4.4:44907168-44907187 | MS.gene08692:CDS | 25.0% |
| !! | GTAAAATCCTTTTGTCTAAA+TGG | + | chr4.4:44907256-44907275 | None:intergenic | 25.0% |
| !! | TTGGTTCTTAAATCAATTGA+AGG | + | chr4.4:44906542-44906561 | None:intergenic | 25.0% |
| !!! | AAAGTGTTTTTCTCTTGAAA+TGG | + | chr4.4:44906916-44906935 | None:intergenic | 25.0% |
| !!! | AAATGAACCTACTAGTTTTA+TGG | + | chr4.4:44909888-44909907 | None:intergenic | 25.0% |
| !!! | AACTAAATTTTGGCTCATAT+AGG | - | chr4.4:44909361-44909380 | MS.gene08692:intron | 25.0% |
| !!! | AAGTTTTTCAACTAACCATA+TGG | - | chr4.4:44910447-44910466 | MS.gene08692:CDS | 25.0% |
| !!! | AGTTACGATTTTAAGTACTA+TGG | - | chr4.4:44907076-44907095 | MS.gene08692:CDS | 25.0% |
| !!! | GCATAATAAAATGGATTTTG+AGG | - | chr4.4:44910510-44910529 | MS.gene08692:CDS | 25.0% |
| !!! | TAAGTCAATGTTTTAAAGAC+CGG | - | chr4.4:44909412-44909431 | MS.gene08692:intron | 25.0% |
| !!! | TTGATTTTCTTTCAAGTTCT+TGG | - | chr4.4:44907368-44907387 | MS.gene08692:intron | 25.0% |
| AAAACTCTCTCCAATGTTTA+GGG | + | chr4.4:44910264-44910283 | None:intergenic | 30.0% | |
| AAATCATGGAAGTTTAACCT+AGG | - | chr4.4:44909654-44909673 | MS.gene08692:CDS | 30.0% | |
| AAATCCAAATGGGATTTGAA+AGG | - | chr4.4:44906851-44906870 | MS.gene08692:CDS | 30.0% | |
| AACTACAAGGTAATTGATGA+AGG | + | chr4.4:44910225-44910244 | None:intergenic | 30.0% | |
| AACTAGTAGGTTCATTTGAA+TGG | - | chr4.4:44909891-44909910 | MS.gene08692:CDS | 30.0% | |
| AATTCCAATCACTTTCAACA+TGG | - | chr4.4:44909841-44909860 | MS.gene08692:CDS | 30.0% | |
| AATTCTTGAGAAATCTGGTT+TGG | + | chr4.4:44906561-44906580 | None:intergenic | 30.0% | |
| AATTTCATCTCCTAGATAGT+AGG | + | chr4.4:44909825-44909844 | None:intergenic | 30.0% | |
| AGTTTCACTAATTCAATCTC+CGG | - | chr4.4:44909621-44909640 | MS.gene08692:intron | 30.0% | |
| ATCCAAAAGACAAAGAAACA+TGG | - | chr4.4:44908671-44908690 | MS.gene08692:intron | 30.0% | |
| CACTATTGATAAAATTGTGC+AGG | - | chr4.4:44907345-44907364 | MS.gene08692:CDS | 30.0% | |
| CCAAATTTGATGAAAAGGTA+GGG | + | chr4.4:44906969-44906988 | None:intergenic | 30.0% | |
| CTAAAATCATCCTTCAACAA+TGG | + | chr4.4:44910538-44910557 | None:intergenic | 30.0% | |
| GATCAAACCAATTGACAAAT+TGG | + | chr4.4:44909454-44909473 | None:intergenic | 30.0% | |
| GCTTCAGAAACTAATTCAAA+TGG | - | chr4.4:44909189-44909208 | MS.gene08692:intron | 30.0% | |
| GTCATTTATGTAGTGACAAA+AGG | - | chr4.4:44907682-44907701 | MS.gene08692:intron | 30.0% | |
| GTTTGTTTGATTGCAAATAG+AGG | + | chr4.4:44908363-44908382 | None:intergenic | 30.0% | |
| TAAAACTCTCTCCAATGTTT+AGG | + | chr4.4:44910265-44910284 | None:intergenic | 30.0% | |
| TAATTCAAATGGGACTACAT+TGG | - | chr4.4:44909200-44909219 | MS.gene08692:intron | 30.0% | |
| TCATCAATTACCTTGTAGTT+GGG | - | chr4.4:44910225-44910244 | MS.gene08692:CDS | 30.0% | |
| TCCAAAAGACAAAGAAACAT+GGG | - | chr4.4:44908672-44908691 | MS.gene08692:intron | 30.0% | |
| TGATTGAAAAGGTTCAAAGA+TGG | + | chr4.4:44910604-44910623 | None:intergenic | 30.0% | |
| TTCATCAATTACCTTGTAGT+TGG | - | chr4.4:44910224-44910243 | MS.gene08692:CDS | 30.0% | |
| TTGACAACTTCAACAATTCT+TGG | + | chr4.4:44910142-44910161 | None:intergenic | 30.0% | |
| TTGATCCATAGGTAGTAATA+AGG | + | chr4.4:44910046-44910065 | None:intergenic | 30.0% | |
| TTTGGTTATTGTTGTCTTCT+TGG | + | chr4.4:44906658-44906677 | None:intergenic | 30.0% | |
| ! | AACAATTCTTGGTGTGTATA+GGG | + | chr4.4:44910131-44910150 | None:intergenic | 30.0% |
| ! | AAGATCTTTGATTTAGGTGT+TGG | - | chr4.4:44909021-44909040 | MS.gene08692:intron | 30.0% |
| ! | CATTGTTGAAGGATGATTTT+AGG | - | chr4.4:44910536-44910555 | MS.gene08692:CDS | 30.0% |
| ! | CCTACCTTTTCATCAAATTT+GGG | - | chr4.4:44906967-44906986 | MS.gene08692:CDS | 30.0% |
| ! | CGGTTTAAGATCTTTGATTT+AGG | - | chr4.4:44909015-44909034 | MS.gene08692:intron | 30.0% |
| ! | CTTCAAAAGTATAGAAATGC+AGG | - | chr4.4:44908628-44908647 | MS.gene08692:intron | 30.0% |
| ! | CTTCTGTGTCTAAAGTTATT+TGG | - | chr4.4:44909238-44909257 | MS.gene08692:intron | 30.0% |
| ! | GAATTGTTGTTGCTTGAATT+TGG | + | chr4.4:44906676-44906695 | None:intergenic | 30.0% |
| ! | GAGTTTGATTTATATGCCAT+AGG | - | chr4.4:44907564-44907583 | MS.gene08692:intron | 30.0% |
| ! | GATATTGCCATTTAGACAAA+AGG | - | chr4.4:44907246-44907265 | MS.gene08692:CDS | 30.0% |
| ! | TACAATTTTCTCTTGCAGAT+TGG | - | chr4.4:44909717-44909736 | MS.gene08692:CDS | 30.0% |
| ! | TAGTGAATTTACCCTGTTTT+GGG | + | chr4.4:44909774-44909793 | None:intergenic | 30.0% |
| ! | TGTGTCTAAAGTTATTTGGA+TGG | - | chr4.4:44909242-44909261 | MS.gene08692:intron | 30.0% |
| ! | TTAGTGAATTTACCCTGTTT+TGG | + | chr4.4:44909775-44909794 | None:intergenic | 30.0% |
| !! | AATCAAGCTGTTTCTCTTAA+GGG | - | chr4.4:44910619-44910638 | MS.gene08692:CDS | 30.0% |
| !! | ACGATTTTAAGTACTATGGA+AGG | - | chr4.4:44907080-44907099 | MS.gene08692:CDS | 30.0% |
| !! | ATTTTCGGTTTGTTTGGATT+TGG | + | chr4.4:44906878-44906897 | None:intergenic | 30.0% |
| !! | CTTTGGAATTCTGATTTCAA+AGG | + | chr4.4:44908245-44908264 | None:intergenic | 30.0% |
| !! | GATTTTAGGAATTTTTTGCC+TGG | - | chr4.4:44910550-44910569 | MS.gene08692:CDS | 30.0% |
| !! | TTTTAAAGACCGGTTAAATC+AGG | - | chr4.4:44909422-44909441 | MS.gene08692:intron | 30.0% |
| !!! | AAGAGTGCATCAATTTTTTG+AGG | + | chr4.4:44908829-44908848 | None:intergenic | 30.0% |
| !!! | AATTCTGTTTTGGGAAGTAT+TGG | - | chr4.4:44907220-44907239 | MS.gene08692:CDS | 30.0% |
| !!! | ACATTGATTTTCGGTTTGTT+TGG | + | chr4.4:44906884-44906903 | None:intergenic | 30.0% |
| !!! | AGAGTGCATCAATTTTTTGA+GGG | + | chr4.4:44908828-44908847 | None:intergenic | 30.0% |
| !!! | ATTCTGTTTTGGGAAGTATT+GGG | - | chr4.4:44907221-44907240 | MS.gene08692:CDS | 30.0% |
| AAAACCAAGCCTCAAAAATC+AGG | - | chr4.4:44906434-44906453 | MS.gene08692:CDS | 35.0% | |
| AAAGCATACATTGTTGTCTC+TGG | - | chr4.4:44908922-44908941 | MS.gene08692:intron | 35.0% | |
| AAATTATAGGGGTTCATGCA+TGG | + | chr4.4:44907592-44907611 | None:intergenic | 35.0% | |
| AACTATTGTGCATTACTCCT+AGG | + | chr4.4:44909674-44909693 | None:intergenic | 35.0% | |
| ACAGGGTAAATTCACTAACA+AGG | - | chr4.4:44909777-44909796 | MS.gene08692:CDS | 35.0% | |
| AGACAATATGATTGTACCTG+AGG | + | chr4.4:44907468-44907487 | None:intergenic | 35.0% | |
| AGCACCCAAATTTGATGAAA+AGG | + | chr4.4:44906974-44906993 | None:intergenic | 35.0% | |
| ATCTGGCTACATAACACAAT+GGG | - | chr4.4:44908792-44908811 | MS.gene08692:intron | 35.0% | |
| ATGTTGAATGACTATGTTGC+TGG | - | chr4.4:44906404-44906423 | MS.gene08692:CDS | 35.0% | |
| CAACATCATAACCCAAAACA+GGG | - | chr4.4:44909760-44909779 | MS.gene08692:CDS | 35.0% | |
| CAAGGTAATTGATGAAGGTA+AGG | + | chr4.4:44910220-44910239 | None:intergenic | 35.0% | |
| CACCACTTCTTGAAAAATTC+AGG | - | chr4.4:44908884-44908903 | MS.gene08692:intron | 35.0% | |
| CATCAATTACCTTGTAGTTG+GGG | - | chr4.4:44910226-44910245 | MS.gene08692:CDS | 35.0% | |
| CCAAAAGACAAAGAAACATG+GGG | - | chr4.4:44908673-44908692 | MS.gene08692:intron | 35.0% | |
| CCAAAATTGTCATCTGAAGA+TGG | + | chr4.4:44909992-44910011 | None:intergenic | 35.0% | |
| CCACAGTAATTACAACACTT+GGG | + | chr4.4:44909131-44909150 | None:intergenic | 35.0% | |
| CCCAAATTTGATGAAAAGGT+AGG | + | chr4.4:44906970-44906989 | None:intergenic | 35.0% | |
| CGGTTTAATCTGTTTAATCG+TGG | + | chr4.4:44909583-44909602 | None:intergenic | 35.0% | |
| CTAAGAAGAAGAATCATCCA+AGG | - | chr4.4:44909932-44909951 | MS.gene08692:CDS | 35.0% | |
| CTATCCATGTTGAAAGTGAT+TGG | + | chr4.4:44909848-44909867 | None:intergenic | 35.0% | |
| CTTGATTTCGGAATTTGAAC+CGG | + | chr4.4:44910331-44910350 | None:intergenic | 35.0% | |
| GAACTAGCCAATTTGTCAAT+TGG | - | chr4.4:44909444-44909463 | MS.gene08692:intron | 35.0% | |
| GAAGCAACCATAAAACTAGT+AGG | - | chr4.4:44909878-44909897 | MS.gene08692:CDS | 35.0% | |
| GAATACACTGCTTGTATAAC+TGG | + | chr4.4:44909078-44909097 | None:intergenic | 35.0% | |
| GACACTAGAGAAAAAGTCTT+TGG | + | chr4.4:44908262-44908281 | None:intergenic | 35.0% | |
| GAGAAACAGCTTGATTGAAA+AGG | + | chr4.4:44910615-44910634 | None:intergenic | 35.0% | |
| GATACCTGGAAAGAAAATGT+TGG | - | chr4.4:44907159-44907178 | MS.gene08692:CDS | 35.0% | |
| GTACTATGGAAGGTTTCAAA+TGG | - | chr4.4:44907090-44907109 | MS.gene08692:CDS | 35.0% | |
| TAAGAGCAGTAAGTGAAAGT+TGG | - | chr4.4:44909963-44909982 | MS.gene08692:CDS | 35.0% | |
| TATTCTGTCGCATTCCATTT+CGG | + | chr4.4:44910172-44910191 | None:intergenic | 35.0% | |
| TCAACATCATAACCCAAAAC+AGG | - | chr4.4:44909759-44909778 | MS.gene08692:CDS | 35.0% | |
| TCAATAGTGATATCATAGGC+AGG | + | chr4.4:44907334-44907353 | None:intergenic | 35.0% | |
| TCATTCTCACAAACAAGAGA+TGG | + | chr4.4:44906698-44906717 | None:intergenic | 35.0% | |
| TCCACAGTAATTACAACACT+TGG | + | chr4.4:44909132-44909151 | None:intergenic | 35.0% | |
| TCTCAAGAATTGCACAACAA+TGG | - | chr4.4:44906570-44906589 | MS.gene08692:CDS | 35.0% | |
| TCTCACCTTATTACTACCTA+TGG | - | chr4.4:44910038-44910057 | MS.gene08692:CDS | 35.0% | |
| TGAAGATGCTAAGAAAAACC+CGG | - | chr4.4:44910309-44910328 | MS.gene08692:CDS | 35.0% | |
| TGAGTGCATATTTGATCCAT+AGG | + | chr4.4:44910057-44910076 | None:intergenic | 35.0% | |
| TGGAAAGCTATAACGATTCA+CGG | - | chr4.4:44907035-44907054 | MS.gene08692:CDS | 35.0% | |
| TGTGAATGCAGTATCATGTT+TGG | + | chr4.4:44908479-44908498 | None:intergenic | 35.0% | |
| TGTGCAATTCTTGAGAAATC+TGG | + | chr4.4:44906566-44906585 | None:intergenic | 35.0% | |
| TTGATTTCGGAATTTGAACC+GGG | + | chr4.4:44910330-44910349 | None:intergenic | 35.0% | |
| TTGTCAAAGAAAGACCGAAA+TGG | - | chr4.4:44910155-44910174 | MS.gene08692:CDS | 35.0% | |
| ! | AAAGAGAGAGCTTTATGAAG+AGG | - | chr4.4:44906769-44906788 | MS.gene08692:CDS | 35.0% |
| ! | ATCTCCAACATTTTCTTTCC+AGG | + | chr4.4:44907166-44907185 | None:intergenic | 35.0% |
| ! | CAACAATTCTTGGTGTGTAT+AGG | + | chr4.4:44910132-44910151 | None:intergenic | 35.0% |
| ! | CAGTGTTTTTCCCTAAACAT+TGG | - | chr4.4:44910251-44910270 | MS.gene08692:CDS | 35.0% |
| ! | CCATCTTCAGATGACAATTT+TGG | - | chr4.4:44909989-44910008 | MS.gene08692:CDS | 35.0% |
| ! | CCCTACCTTTTCATCAAATT+TGG | - | chr4.4:44906966-44906985 | MS.gene08692:CDS | 35.0% |
| ! | GGTTAGTTGAAAAACTTGCT+TGG | + | chr4.4:44910444-44910463 | None:intergenic | 35.0% |
| ! | GTTGAAAAACTTGCTTGGTT+TGG | + | chr4.4:44910439-44910458 | None:intergenic | 35.0% |
| ! | TCTTTGTCTTTTGGATCTAC+TGG | + | chr4.4:44908667-44908686 | None:intergenic | 35.0% |
| !! | AAGTCATTGTTTGACTTGGA+TGG | + | chr4.4:44908159-44908178 | None:intergenic | 35.0% |
| !! | AGCAGTGTATTCTAGTTTGA+AGG | - | chr4.4:44909086-44909105 | MS.gene08692:intron | 35.0% |
| !! | CAATCAAGCTGTTTCTCTTA+AGG | - | chr4.4:44910618-44910637 | MS.gene08692:CDS | 35.0% |
| !! | CACTGTTGTTTCTGATACAT+AGG | + | chr4.4:44908719-44908738 | None:intergenic | 35.0% |
| !! | CTTAGTGTTTTTGATCCATG+TGG | + | chr4.4:44909917-44909936 | None:intergenic | 35.0% |
| !! | CTTGCTTGGTTTGGAAAATT+TGG | + | chr4.4:44910430-44910449 | None:intergenic | 35.0% |
| !! | GAGTTTTAGTCGAAATACGA+CGG | - | chr4.4:44906355-44906374 | MS.gene08692:CDS | 35.0% |
| !! | GCAGTGTATTCTAGTTTGAA+GGG | - | chr4.4:44909087-44909106 | MS.gene08692:intron | 35.0% |
| !! | GTTGATGATGATATGATACC+TGG | - | chr4.4:44907145-44907164 | MS.gene08692:CDS | 35.0% |
| !! | TTAGGTGTTGGTTCAATTTC+CGG | - | chr4.4:44909033-44909052 | MS.gene08692:intron | 35.0% |
| !! | TTTGTTGTGCCTGATTTTTG+AGG | + | chr4.4:44906446-44906465 | None:intergenic | 35.0% |
| !!! | CAGTTCCAATGGTTTTGTTT+TGG | + | chr4.4:44906805-44906824 | None:intergenic | 35.0% |
| !!! | GACCTGAATTTTTCAAGAAG+TGG | + | chr4.4:44908889-44908908 | None:intergenic | 35.0% |
| !!! | TACATTGGTTCTTTTGCCTA+GGG | - | chr4.4:44909215-44909234 | MS.gene08692:intron | 35.0% |
| !!! | TGATTTTTGAGGCTTGGTTT+TGG | + | chr4.4:44906435-44906454 | None:intergenic | 35.0% |
| !!! | TTTTGGTTTGCAAAGAACGA+CGG | - | chr4.4:44908995-44909014 | MS.gene08692:intron | 35.0% |
| AAATTTGGGTGCTTTCGTTC+GGG | - | chr4.4:44906981-44907000 | MS.gene08692:CDS | 40.0% | |
| AACTTGAACCGGTTAAACCA+AGG | - | chr4.4:44909517-44909536 | MS.gene08692:intron | 40.0% | |
| AATCCGATCGAATGTGTTTC+TGG | + | chr4.4:44908571-44908590 | None:intergenic | 40.0% | |
| ACACCAGAAACACATTCGAT+CGG | - | chr4.4:44908565-44908584 | MS.gene08692:intron | 40.0% | |
| ACTCTGCAGTCCAGTTAAAT+CGG | - | chr4.4:44909480-44909499 | MS.gene08692:intron | 40.0% | |
| AGAAGAAGAATCATCCAAGG+TGG | - | chr4.4:44909935-44909954 | MS.gene08692:CDS | 40.0% | |
| ATCTCCTAGATAGTAGGCAT+TGG | + | chr4.4:44909819-44909838 | None:intergenic | 40.0% | |
| ATGATCACACCACACATTGT+AGG | - | chr4.4:44906602-44906621 | MS.gene08692:CDS | 40.0% | |
| CAAATCTTCACCAGTTGAGA+AGG | + | chr4.4:44907443-44907462 | None:intergenic | 40.0% | |
| CAAATTTGGGTGCTTTCGTT+CGG | - | chr4.4:44906980-44906999 | MS.gene08692:CDS | 40.0% | |
| CAGTTAAATCGGACTGAACA+AGG | - | chr4.4:44909491-44909510 | MS.gene08692:intron | 40.0% | |
| CATCTGGCTACATAACACAA+TGG | - | chr4.4:44908791-44908810 | MS.gene08692:intron | 40.0% | |
| CCATGATTTGAAAGTCGAAC+CGG | + | chr4.4:44909643-44909662 | None:intergenic | 40.0% | |
| CGTTCTTTGCAAACCAAAAG+AGG | + | chr4.4:44908994-44909013 | None:intergenic | 40.0% | |
| CTTGTTCAGTCCGATTTAAC+TGG | + | chr4.4:44909493-44909512 | None:intergenic | 40.0% | |
| GAAAAATTCAGGTCCACAGT+TGG | - | chr4.4:44908895-44908914 | MS.gene08692:intron | 40.0% | |
| GAACAAGGTTGAACTTGAAC+CGG | - | chr4.4:44909506-44909525 | MS.gene08692:intron | 40.0% | |
| GAGAAACTTGAGGGTCATAA+TGG | + | chr4.4:44910087-44910106 | None:intergenic | 40.0% | |
| GATGGTAATCTTGAAGCTGA+AGG | + | chr4.4:44910586-44910605 | None:intergenic | 40.0% | |
| GTCATTCAACATTCCATCCA+AGG | + | chr4.4:44906396-44906415 | None:intergenic | 40.0% | |
| TCAACTAACCATATGGAACC+AGG | - | chr4.4:44910454-44910473 | MS.gene08692:CDS | 40.0% | |
| TCACCAGTTGAGAAGGTAAA+AGG | + | chr4.4:44907436-44907455 | None:intergenic | 40.0% | |
| TGAACCAACCTTGGTTTAAC+CGG | + | chr4.4:44909528-44909547 | None:intergenic | 40.0% | |
| TGATGAAGGTAAGGTGTGTT+TGG | + | chr4.4:44910211-44910230 | None:intergenic | 40.0% | |
| TGGACCTTTCAAATCCCATT+TGG | + | chr4.4:44906858-44906877 | None:intergenic | 40.0% | |
| TGTCTGTGACAGGGTTTAAT+TGG | + | chr4.4:44908456-44908475 | None:intergenic | 40.0% | |
| TTAGCACTAATATGTGCACC+TGG | + | chr4.4:44910475-44910494 | None:intergenic | 40.0% | |
| TTCAAGTACGCGATGATCAA+TGG | - | chr4.4:44908755-44908774 | MS.gene08692:intron | 40.0% | |
| TTTGCAGACAGAAGCTGATT+TGG | - | chr4.4:44907114-44907133 | MS.gene08692:CDS | 40.0% | |
| ! | ACTCCTTTTACCTTCTCAAC+TGG | - | chr4.4:44907430-44907449 | MS.gene08692:intron | 40.0% |
| ! | CCCAAGTGTTGTAATTACTG+TGG | - | chr4.4:44909128-44909147 | MS.gene08692:intron | 40.0% |
| ! | CCCCATGTTTCTTTGTCTTT+TGG | + | chr4.4:44908676-44908695 | None:intergenic | 40.0% |
| ! | GCAAGTGTTTCTGAACCTAA+TGG | + | chr4.4:44908205-44908224 | None:intergenic | 40.0% |
| ! | GTTGCTGTTGATCATCATAC+TGG | - | chr4.4:44910706-44910725 | MS.gene08692:CDS | 40.0% |
| ! | TAAACCAAGGTTGGTTCAAC+TGG | - | chr4.4:44909530-44909549 | MS.gene08692:intron | 40.0% |
| ! | TGGCTAGTTCCTGATTTAAC+CGG | + | chr4.4:44909434-44909453 | None:intergenic | 40.0% |
| ! | TGGTAATGTCCTACAATGTG+TGG | + | chr4.4:44906614-44906633 | None:intergenic | 40.0% |
| ! | TTACATGTGTTGGTGCACTA+GGG | - | chr4.4:44908521-44908540 | MS.gene08692:intron | 40.0% |
| ! | TTGAAGTGTCTCAGTTCCAA+TGG | + | chr4.4:44906816-44906835 | None:intergenic | 40.0% |
| ! | TTTACATGTGTTGGTGCACT+AGG | - | chr4.4:44908520-44908539 | MS.gene08692:intron | 40.0% |
| !! | AGATTTTGGCACATGTAGCT+GGG | - | chr4.4:44907182-44907201 | MS.gene08692:CDS | 40.0% |
| !! | TAGGTGTTGGTTCAATTTCC+GGG | - | chr4.4:44909034-44909053 | MS.gene08692:intron | 40.0% |
| !! | TGTGAGAAAGGCTTTGAAGA+TGG | - | chr4.4:44909167-44909186 | MS.gene08692:intron | 40.0% |
| !!! | CTACATTGGTTCTTTTGCCT+AGG | - | chr4.4:44909214-44909233 | MS.gene08692:intron | 40.0% |
| !!! | GTATGCTTTTTTGCCAACTG+TGG | + | chr4.4:44908911-44908930 | None:intergenic | 40.0% |
| !!! | TTTTGAGGTGCCATTGTTGA+AGG | - | chr4.4:44910525-44910544 | MS.gene08692:CDS | 40.0% |
| AAGTACGCGATGATCAATGG+TGG | - | chr4.4:44908758-44908777 | MS.gene08692:intron | 45.0% | |
| ACTTTAGACACAGAAGCCCT+AGG | + | chr4.4:44909234-44909253 | None:intergenic | 45.0% | |
| AGAAGTGGAGATTCCTTGGA+TGG | - | chr4.4:44906380-44906399 | MS.gene08692:CDS | 45.0% | |
| AGCTTTCCACGATTCTCTTG+AGG | + | chr4.4:44907024-44907043 | None:intergenic | 45.0% | |
| CAAATGGTTGGCAAGCTTCA+TGG | - | chr4.4:44910353-44910372 | MS.gene08692:CDS | 45.0% | |
| CAGAATCTTGAGCAGTGATG+AGG | + | chr4.4:44910736-44910755 | None:intergenic | 45.0% | |
| CTCACCAATGCCTACTATCT+AGG | - | chr4.4:44909812-44909831 | MS.gene08692:CDS | 45.0% | |
| CTTAAGGGACTTAAAGCTGC+TGG | - | chr4.4:44910634-44910653 | MS.gene08692:CDS | 45.0% | |
| GAAACCAGTTGAACCAACCT+TGG | + | chr4.4:44909537-44909556 | None:intergenic | 45.0% | |
| GAAGGTAAGGTGTGTTTGGA+TGG | + | chr4.4:44910207-44910226 | None:intergenic | 45.0% | |
| GCATACATTGTTGTCTCTGG+TGG | - | chr4.4:44908925-44908944 | MS.gene08692:intron | 45.0% | |
| GCTTTCCACGATTCTCTTGA+GGG | + | chr4.4:44907023-44907042 | None:intergenic | 45.0% | |
| GGTTCATTTGAATGGCCACA+TGG | - | chr4.4:44909899-44909918 | MS.gene08692:CDS | 45.0% | |
| GGTTGAACGCTGAAACTTGT+CGG | - | chr4.4:44908542-44908561 | MS.gene08692:intron | 45.0% | |
| GTGATATCATAGGCAGGATC+AGG | + | chr4.4:44907328-44907347 | None:intergenic | 45.0% | |
| GTGCTCAACTAGTTGCCATT+AGG | - | chr4.4:44908187-44908206 | MS.gene08692:CDS | 45.0% | |
| TATGTGCACCTGGTTCCATA+TGG | + | chr4.4:44910465-44910484 | None:intergenic | 45.0% | |
| TGAACCGGTTAAACCAAGGT+TGG | - | chr4.4:44909521-44909540 | MS.gene08692:intron | 45.0% | |
| TGAGAGAAGATGCAGCTTCT+TGG | + | chr4.4:44906634-44906653 | None:intergenic | 45.0% | |
| ! | AAAGCTGCTGGTGCTAAGTT+GGG | - | chr4.4:44910646-44910665 | MS.gene08692:CDS | 45.0% |
| ! | AGCTCTCAAATGGCCTCTTT+TGG | - | chr4.4:44908978-44908997 | MS.gene08692:intron | 45.0% |
| ! | CCGGTTCGACTTTCAAATCA+TGG | - | chr4.4:44909640-44909659 | MS.gene08692:CDS | 45.0% |
| ! | TAAAGCTGCTGGTGCTAAGT+TGG | - | chr4.4:44910645-44910664 | MS.gene08692:CDS | 45.0% |
| ! | TAACTGGACTGCAGAGTACT+CGG | + | chr4.4:44909477-44909496 | None:intergenic | 45.0% |
| ! | TCTTGGTGTGTATAGGGAGA+TGG | + | chr4.4:44910125-44910144 | None:intergenic | 45.0% |
| !! | AGGTGTTGGTTCAATTTCCG+GGG | - | chr4.4:44909035-44909054 | MS.gene08692:intron | 45.0% |
| !! | AGTTCTGGGAGAGAAACTTG+AGG | + | chr4.4:44910097-44910116 | None:intergenic | 45.0% |
| !! | CATGTTTGGTGTCTGTGACA+GGG | + | chr4.4:44908465-44908484 | None:intergenic | 45.0% |
| !! | GAGATTTTGGCACATGTAGC+TGG | - | chr4.4:44907181-44907200 | MS.gene08692:CDS | 45.0% |
| !! | GTTCTGGGAGAGAAACTTGA+GGG | + | chr4.4:44910096-44910115 | None:intergenic | 45.0% |
| !! | TCATGTTTGGTGTCTGTGAC+AGG | + | chr4.4:44908466-44908485 | None:intergenic | 45.0% |
| !! | TGGTGGAAAGCACTTTCATC+TGG | - | chr4.4:44908775-44908794 | MS.gene08692:intron | 45.0% |
| !!! | CTGTTTTGGGAAGTATTGGG+AGG | - | chr4.4:44907224-44907243 | MS.gene08692:CDS | 45.0% |
| !!! | GCTGAAGGCATTTTCATTCC+AGG | + | chr4.4:44910571-44910590 | None:intergenic | 45.0% |
| !!! | TGTGCCTGATTTTTGAGGCT+TGG | + | chr4.4:44906441-44906460 | None:intergenic | 45.0% |
| !! | AAAAAAATATTATCATAAAA+TGG | + | chr4.4:44907527-44907546 | None:intergenic | 5.0% |
| !! | TATATAAAATAAAATTATAG+GGG | + | chr4.4:44907603-44907622 | None:intergenic | 5.0% |
| !!! | TATTTTTTTTTAACAAAAAT+TGG | - | chr4.4:44907538-44907557 | MS.gene08692:intron | 5.0% |
| AACACTGCTCCCCAACTACA+AGG | + | chr4.4:44910238-44910257 | None:intergenic | 50.0% | |
| AAGCTGCAGCAGCTCTCAAA+TGG | - | chr4.4:44908968-44908987 | MS.gene08692:intron | 50.0% | |
| AGGGAGATGGAAGAGAGTTC+TGG | + | chr4.4:44910112-44910131 | None:intergenic | 50.0% | |
| CTGCTCTTATGAGTCCACCT+TGG | + | chr4.4:44909952-44909971 | None:intergenic | 50.0% | |
| CTGGTGAAGATTTGCACCTC+AGG | - | chr4.4:44907449-44907468 | MS.gene08692:intron | 50.0% | |
| GGGAGATGGAAGAGAGTTCT+GGG | + | chr4.4:44910111-44910130 | None:intergenic | 50.0% | |
| ! | AACTGGACTGCAGAGTACTC+GGG | + | chr4.4:44909476-44909495 | None:intergenic | 50.0% |
| CGAAATACGACGGCGAGAAG+TGG | - | chr4.4:44906365-44906384 | MS.gene08692:CDS | 55.0% | |
| GGCGAGAAGTGGAGATTCCT+TGG | - | chr4.4:44906376-44906395 | MS.gene08692:CDS | 55.0% | |
| GGGTTCATGCATGGCACCTA+TGG | + | chr4.4:44907583-44907602 | None:intergenic | 55.0% | |
| TTCGTTCGGGAGTCCAAACG+AGG | - | chr4.4:44906994-44907013 | MS.gene08692:CDS | 55.0% | |
| ! | GCTGCTGCAGCTTGTTCACA+AGG | + | chr4.4:44908961-44908980 | None:intergenic | 55.0% |
| ! | TGCTGGTGCTAAGTTGGGAC+AGG | - | chr4.4:44910651-44910670 | MS.gene08692:CDS | 55.0% |
| CTCTTGAGGGACGCCTCGTT+TGG | + | chr4.4:44907010-44907029 | None:intergenic | 60.0% | |
| GGCGTCCCTCAAGAGAATCG+TGG | - | chr4.4:44907015-44907034 | MS.gene08692:CDS | 60.0% | |
| TGCCTCAGAGTTCGACACCC+CGG | + | chr4.4:44909055-44909074 | None:intergenic | 60.0% | |
| !! | TTCCGGGGTGTCGAACTCTG+AGG | - | chr4.4:44909050-44909069 | MS.gene08692:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 44906353 | 44910756 | 44906353 | ID=MS.gene08692 |
| chr4.4 | mRNA | 44906353 | 44910756 | 44906353 | ID=MS.gene08692.t1;Parent=MS.gene08692 |
| chr4.4 | exon | 44909639 | 44910756 | 44909639 | ID=MS.gene08692.t1.exon1;Parent=MS.gene08692.t1 |
| chr4.4 | CDS | 44909639 | 44910756 | 44909639 | ID=cds.MS.gene08692.t1;Parent=MS.gene08692.t1 |
| chr4.4 | exon | 44907818 | 44908488 | 44907818 | ID=MS.gene08692.t1.exon2;Parent=MS.gene08692.t1 |
| chr4.4 | CDS | 44907818 | 44908488 | 44907818 | ID=cds.MS.gene08692.t1;Parent=MS.gene08692.t1 |
| chr4.4 | exon | 44906353 | 44907374 | 44906353 | ID=MS.gene08692.t1.exon3;Parent=MS.gene08692.t1 |
| chr4.4 | CDS | 44906353 | 44907374 | 44906353 | ID=cds.MS.gene08692.t1;Parent=MS.gene08692.t1 |
| Gene Sequence |
| Protein sequence |
