Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049312.t1 | RHN69901.1 | 95 | 423 | 10 | 4 | 1 | 416 | 71 | 489 | 1.00E-212 | 749.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049312.t1 | Q9FLF4 | 51.2 | 428 | 178 | 7 | 8 | 416 | 5 | 420 | 1.8e-109 | 397.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049312.t1 | G7JAZ3 | 95.0 | 423 | 10 | 4 | 1 | 416 | 1 | 419 | 7.4e-213 | 749.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene049312 | -0.817155 | 3.82E-52 | -1.69E-46 |
| MS.gene049181 | MS.gene049312 | 0.80094 | 1.14E-48 | -1.69E-46 |
| MS.gene049281 | MS.gene049312 | 0.8026 | 5.20E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene050129 | 0.838833 | 2.27E-57 | -1.69E-46 |
| MS.gene049312 | MS.gene050381 | 0.832384 | 9.75E-56 | -1.69E-46 |
| MS.gene049312 | MS.gene050504 | -0.827302 | 1.69E-54 | -1.69E-46 |
| MS.gene049312 | MS.gene050612 | -0.805416 | 1.35E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene050868 | -0.81254 | 4.03E-51 | -1.69E-46 |
| MS.gene049312 | MS.gene050871 | -0.813671 | 2.27E-51 | -1.69E-46 |
| MS.gene049312 | MS.gene050883 | 0.813016 | 3.17E-51 | -1.69E-46 |
| MS.gene049312 | MS.gene05141 | 0.818373 | 2.03E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene051946 | 0.834864 | 2.34E-56 | -1.69E-46 |
| MS.gene049312 | MS.gene052164 | -0.823396 | 1.42E-53 | -1.69E-46 |
| MS.gene049312 | MS.gene053203 | -0.81991 | 9.06E-53 | -1.69E-46 |
| MS.gene049312 | MS.gene053549 | 0.801349 | 9.39E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene053561 | 0.808056 | 3.74E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene054003 | -0.807883 | 4.07E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene054595 | -0.800206 | 1.61E-48 | -1.69E-46 |
| MS.gene049312 | MS.gene054706 | 0.801109 | 1.05E-48 | -1.69E-46 |
| MS.gene049312 | MS.gene05470 | -0.805496 | 1.30E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene054954 | -0.821108 | 4.81E-53 | -1.69E-46 |
| MS.gene049312 | MS.gene055362 | -0.806748 | 7.08E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene055502 | -0.82729 | 1.70E-54 | -1.69E-46 |
| MS.gene049312 | MS.gene055577 | -0.818795 | 1.63E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene05589 | -0.818817 | 1.61E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene056310 | 0.815908 | 7.26E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene056311 | 0.8234 | 1.41E-53 | -1.69E-46 |
| MS.gene049312 | MS.gene056504 | -0.822075 | 2.88E-53 | -1.69E-46 |
| MS.gene049312 | MS.gene056510 | -0.815861 | 7.44E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene056550 | 0.813719 | 2.22E-51 | -1.69E-46 |
| MS.gene049312 | MS.gene057014 | 0.851761 | 7.19E-61 | -1.69E-46 |
| MS.gene049312 | MS.gene058171 | 0.803281 | 3.76E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene058544 | -0.807298 | 5.41E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene059022 | -0.829292 | 5.59E-55 | -1.69E-46 |
| MS.gene049312 | MS.gene059023 | -0.80286 | 4.59E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene059718 | -0.801039 | 1.09E-48 | -1.69E-46 |
| MS.gene049312 | MS.gene059865 | -0.808258 | 3.38E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene06077 | -0.825121 | 5.57E-54 | -1.69E-46 |
| MS.gene049312 | MS.gene061340 | -0.806218 | 9.15E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene061360 | -0.830691 | 2.55E-55 | -1.69E-46 |
| MS.gene049312 | MS.gene061556 | -0.808035 | 3.77E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene061731 | -0.822 | 2.99E-53 | -1.69E-46 |
| MS.gene049312 | MS.gene061862 | -0.825327 | 4.98E-54 | -1.69E-46 |
| MS.gene049312 | MS.gene06226 | -0.813049 | 3.12E-51 | -1.69E-46 |
| MS.gene049312 | MS.gene06288 | -0.80262 | 5.15E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene062923 | -0.824209 | 9.13E-54 | -1.69E-46 |
| MS.gene049312 | MS.gene062925 | -0.80709 | 5.99E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene063410 | -0.806438 | 8.23E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene06437 | 0.8038 | 2.93E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene064435 | -0.812084 | 5.06E-51 | -1.69E-46 |
| MS.gene049312 | MS.gene065145 | 0.821046 | 4.97E-53 | -1.69E-46 |
| MS.gene049312 | MS.gene065465 | 0.812843 | 3.46E-51 | -1.69E-46 |
| MS.gene049312 | MS.gene065540 | -0.805813 | 1.11E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene065675 | -0.802296 | 6.00E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene066003 | -0.835285 | 1.83E-56 | -1.69E-46 |
| MS.gene049312 | MS.gene066803 | -0.801289 | 9.66E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene067363 | 0.803755 | 3.00E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene067979 | 0.817942 | 2.54E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene068043 | 0.80934 | 1.99E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene068138 | -0.800654 | 1.30E-48 | -1.69E-46 |
| MS.gene049312 | MS.gene069855 | -0.810196 | 1.30E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene07004 | 0.818452 | 1.95E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene072468 | -0.817354 | 3.45E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene072476 | 0.811142 | 8.12E-51 | -1.69E-46 |
| MS.gene049312 | MS.gene072806 | 0.826994 | 2.00E-54 | -1.69E-46 |
| MS.gene049312 | MS.gene072875 | -0.820322 | 7.29E-53 | -1.69E-46 |
| MS.gene049312 | MS.gene07329 | -0.839255 | 1.77E-57 | -1.69E-46 |
| MS.gene049312 | MS.gene073565 | -0.82233 | 2.51E-53 | -1.69E-46 |
| MS.gene049312 | MS.gene074194 | -0.800116 | 1.68E-48 | -1.69E-46 |
| MS.gene049312 | MS.gene07606 | -0.806923 | 6.50E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene08322 | 0.842906 | 1.94E-58 | -1.69E-46 |
| MS.gene049312 | MS.gene08692 | 0.800841 | 1.19E-48 | -1.69E-46 |
| MS.gene049312 | MS.gene08754 | 0.816597 | 5.10E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene08918 | 0.850073 | 2.15E-60 | -1.69E-46 |
| MS.gene049312 | MS.gene08919 | 0.849945 | 2.33E-60 | -1.69E-46 |
| MS.gene049312 | MS.gene09072 | 0.807047 | 6.12E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene09798 | -0.816167 | 6.36E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene20878 | -0.817937 | 2.54E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene21148 | -0.800099 | 1.69E-48 | -1.69E-46 |
| MS.gene049312 | MS.gene21577 | 0.809466 | 1.87E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene22569 | -0.800278 | 1.55E-48 | -1.69E-46 |
| MS.gene049312 | MS.gene22726 | -0.815805 | 7.66E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene22826 | -0.815323 | 9.80E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene22952 | 0.80451 | 2.09E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene23090 | 0.811082 | 8.36E-51 | -1.69E-46 |
| MS.gene049312 | MS.gene23350 | -0.821483 | 3.94E-53 | -1.69E-46 |
| MS.gene049312 | MS.gene23352 | -0.80854 | 2.95E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene23413 | 0.81637 | 5.73E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene24024 | -0.812896 | 3.37E-51 | -1.69E-46 |
| MS.gene049312 | MS.gene24025 | -0.827422 | 1.58E-54 | -1.69E-46 |
| MS.gene049312 | MS.gene24082 | -0.825259 | 5.17E-54 | -1.69E-46 |
| MS.gene049312 | MS.gene24491 | 0.811458 | 6.93E-51 | -1.69E-46 |
| MS.gene049312 | MS.gene24631 | -0.812143 | 4.92E-51 | -1.69E-46 |
| MS.gene049312 | MS.gene24883 | 0.801694 | 7.98E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene24952 | 0.812945 | 3.28E-51 | -1.69E-46 |
| MS.gene049312 | MS.gene25666 | -0.804189 | 2.43E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene26384 | -0.817978 | 2.49E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene26385 | -0.816327 | 5.86E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene26662 | -0.822405 | 2.41E-53 | -1.69E-46 |
| MS.gene049312 | MS.gene27116 | -0.801291 | 9.65E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene27117 | -0.801801 | 7.58E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene27893 | -0.807996 | 3.85E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene27981 | -0.825117 | 5.58E-54 | -1.69E-46 |
| MS.gene049312 | MS.gene28138 | -0.804051 | 2.60E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene28744 | 0.80198 | 6.97E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene29342 | 0.819034 | 1.44E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene29965 | 0.811637 | 6.34E-51 | -1.69E-46 |
| MS.gene049312 | MS.gene30995 | 0.970909 | 2.44E-132 | -1.69E-46 |
| MS.gene049312 | MS.gene32026 | -0.82069 | 6.00E-53 | -1.69E-46 |
| MS.gene049312 | MS.gene32567 | 0.841201 | 5.49E-58 | -1.69E-46 |
| MS.gene049312 | MS.gene32652 | -0.837149 | 6.16E-57 | -1.69E-46 |
| MS.gene049312 | MS.gene33500 | -0.819038 | 1.43E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene33980 | 0.808068 | 3.71E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene34171 | -0.813843 | 2.08E-51 | -1.69E-46 |
| MS.gene049312 | MS.gene34412 | 0.832176 | 1.10E-55 | -1.69E-46 |
| MS.gene049312 | MS.gene36337 | -0.806969 | 6.35E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene36419 | 0.80766 | 4.53E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene36927 | 0.832283 | 1.03E-55 | -1.69E-46 |
| MS.gene049312 | MS.gene37538 | 0.814539 | 1.46E-51 | -1.69E-46 |
| MS.gene049312 | MS.gene37678 | 0.818433 | 1.97E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene37879 | -0.800402 | 1.47E-48 | -1.69E-46 |
| MS.gene049312 | MS.gene38173 | 0.802414 | 5.67E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene38174 | 0.815247 | 1.02E-51 | -1.69E-46 |
| MS.gene049312 | MS.gene38214 | -0.808915 | 2.45E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene38328 | -0.804507 | 2.09E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene39520 | -0.817639 | 2.97E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene40108 | -0.802626 | 5.13E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene40247 | 0.800915 | 1.15E-48 | -1.69E-46 |
| MS.gene049312 | MS.gene41234 | -0.803396 | 3.56E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene41633 | -0.804373 | 2.23E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene42301 | -0.812464 | 4.18E-51 | -1.69E-46 |
| MS.gene049312 | MS.gene42678 | -0.807131 | 5.87E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene42884 | -0.825121 | 5.57E-54 | -1.69E-46 |
| MS.gene049312 | MS.gene44099 | -0.836491 | 9.07E-57 | -1.69E-46 |
| MS.gene049312 | MS.gene44487 | -0.807792 | 4.25E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene44720 | 0.806786 | 6.95E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene45747 | -0.807707 | 4.43E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene46058 | 0.818063 | 2.38E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene46433 | 0.800384 | 1.48E-48 | -1.69E-46 |
| MS.gene049312 | MS.gene47811 | -0.80171 | 7.92E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene47831 | -0.811147 | 8.10E-51 | -1.69E-46 |
| MS.gene049312 | MS.gene47889 | -0.809357 | 1.97E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene47951 | -0.804944 | 1.69E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene48386 | -0.80036 | 1.50E-48 | -1.69E-46 |
| MS.gene049312 | MS.gene48424 | -0.804795 | 1.82E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene49181 | 0.812444 | 4.23E-51 | -1.69E-46 |
| MS.gene049312 | MS.gene49499 | -0.820663 | 6.09E-53 | -1.69E-46 |
| MS.gene049312 | MS.gene49874 | -0.812985 | 3.22E-51 | -1.69E-46 |
| MS.gene049312 | MS.gene49887 | 0.804318 | 2.29E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene50174 | 0.820865 | 5.47E-53 | -1.69E-46 |
| MS.gene049312 | MS.gene50526 | -0.803089 | 4.12E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene50709 | -0.808117 | 3.63E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene50712 | -0.822025 | 2.95E-53 | -1.69E-46 |
| MS.gene049312 | MS.gene52273 | -0.817593 | 3.04E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene54303 | 0.806264 | 8.95E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene55013 | 0.814277 | 1.67E-51 | -1.69E-46 |
| MS.gene049312 | MS.gene55803 | -0.805132 | 1.55E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene56456 | -0.80179 | 7.63E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene57987 | 0.819294 | 1.25E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene58223 | 0.822999 | 1.75E-53 | -1.69E-46 |
| MS.gene049312 | MS.gene58416 | -0.817994 | 2.47E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene58464 | 0.814643 | 1.39E-51 | -1.69E-46 |
| MS.gene049312 | MS.gene58779 | -0.816119 | 6.52E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene59603 | -0.810417 | 1.16E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene60177 | -0.800209 | 1.60E-48 | -1.69E-46 |
| MS.gene049312 | MS.gene60360 | -0.818735 | 1.68E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene60720 | 0.817289 | 3.56E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene60722 | 0.803448 | 3.47E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene60877 | 0.803848 | 2.87E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene61144 | -0.800617 | 1.33E-48 | -1.69E-46 |
| MS.gene049312 | MS.gene62174 | 0.842343 | 2.74E-58 | -1.69E-46 |
| MS.gene049312 | MS.gene63292 | 0.829231 | 5.78E-55 | -1.69E-46 |
| MS.gene049312 | MS.gene63502 | 0.828755 | 7.54E-55 | -1.69E-46 |
| MS.gene049312 | MS.gene63691 | 0.825008 | 5.92E-54 | -1.69E-46 |
| MS.gene049312 | MS.gene64630 | 0.800935 | 1.14E-48 | -1.69E-46 |
| MS.gene049312 | MS.gene65400 | -0.817771 | 2.77E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene65672 | 0.800397 | 1.47E-48 | -1.69E-46 |
| MS.gene049312 | MS.gene67232 | -0.814446 | 1.53E-51 | -1.69E-46 |
| MS.gene049312 | MS.gene67682 | 0.816519 | 5.31E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene68722 | 0.814634 | 1.39E-51 | -1.69E-46 |
| MS.gene049312 | MS.gene69071 | 0.805409 | 1.35E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene69468 | -0.808092 | 3.67E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene70326 | -0.815232 | 1.03E-51 | -1.69E-46 |
| MS.gene049312 | MS.gene70503 | 0.802626 | 5.13E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene70809 | -0.815432 | 9.27E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene71059 | -0.807083 | 6.01E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene72999 | -0.80585 | 1.09E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene73087 | -0.829421 | 5.20E-55 | -1.69E-46 |
| MS.gene049312 | MS.gene73493 | -0.816213 | 6.21E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene73819 | -0.804654 | 1.95E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene74217 | -0.804993 | 1.65E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene74228 | -0.839161 | 1.87E-57 | -1.69E-46 |
| MS.gene049312 | MS.gene75523 | 0.814862 | 1.24E-51 | -1.69E-46 |
| MS.gene049312 | MS.gene76146 | 0.82684 | 2.18E-54 | -1.69E-46 |
| MS.gene049312 | MS.gene76521 | -0.821727 | 3.46E-53 | -1.69E-46 |
| MS.gene049312 | MS.gene78593 | 0.812424 | 4.27E-51 | -1.69E-46 |
| MS.gene049312 | MS.gene78602 | -0.808304 | 3.31E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene78942 | -0.801365 | 9.32E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene79150 | 0.812238 | 4.69E-51 | -1.69E-46 |
| MS.gene049312 | MS.gene79844 | 0.803417 | 3.52E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene79879 | -0.800273 | 1.56E-48 | -1.69E-46 |
| MS.gene049312 | MS.gene80239 | -0.807666 | 4.52E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene80303 | -0.807287 | 5.44E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene81067 | -0.814338 | 1.62E-51 | -1.69E-46 |
| MS.gene049312 | MS.gene82917 | -0.818297 | 2.11E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene82958 | 0.809667 | 1.69E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene85136 | -0.817295 | 3.55E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene85220 | 0.83701 | 6.69E-57 | -1.69E-46 |
| MS.gene049312 | MS.gene86071 | -0.819481 | 1.14E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene88463 | 0.805518 | 1.28E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene88820 | -0.822501 | 2.29E-53 | -1.69E-46 |
| MS.gene049312 | MS.gene88886 | 0.82243 | 2.38E-53 | -1.69E-46 |
| MS.gene049312 | MS.gene88888 | 0.803398 | 3.55E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene88929 | -0.807265 | 5.50E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene90192 | 0.818097 | 2.34E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene90201 | 0.808146 | 3.57E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene90269 | -0.805586 | 1.24E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene90277 | -0.80476 | 1.85E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene90364 | -0.801027 | 1.09E-48 | -1.69E-46 |
| MS.gene049312 | MS.gene90796 | -0.806887 | 6.61E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene91801 | -0.80479 | 1.82E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene91915 | -0.801442 | 8.99E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene91963 | -0.819345 | 1.22E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene91977 | 0.804506 | 2.09E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene92147 | -0.809277 | 2.05E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene92636 | -0.804605 | 1.99E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene92774 | 0.802301 | 5.99E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene93036 | -0.818654 | 1.75E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene93362 | -0.805085 | 1.58E-49 | -1.69E-46 |
| MS.gene049312 | MS.gene94262 | 0.800744 | 1.25E-48 | -1.69E-46 |
| MS.gene049312 | MS.gene95701 | -0.813158 | 2.95E-51 | -1.69E-46 |
| MS.gene049312 | MS.gene96309 | -0.821374 | 4.18E-53 | -1.69E-46 |
| MS.gene049312 | MS.gene96524 | -0.807447 | 5.03E-50 | -1.69E-46 |
| MS.gene049312 | MS.gene97437 | 0.822279 | 2.58E-53 | -1.69E-46 |
| MS.gene049312 | MS.gene98166 | -0.816473 | 5.43E-52 | -1.69E-46 |
| MS.gene049312 | MS.gene98678 | -0.822066 | 2.89E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049312.t1 | MTR_3g095730 | 95.035 | 423 | 10 | 4 | 1 | 416 | 1 | 419 | 0.0 | 796 |
| MS.gene049312.t1 | MTR_8g092870 | 66.274 | 424 | 129 | 5 | 1 | 416 | 1 | 418 | 0.0 | 548 |
| MS.gene049312.t1 | MTR_7g106340 | 30.326 | 399 | 257 | 10 | 11 | 394 | 6 | 398 | 4.83e-37 | 140 |
| MS.gene049312.t1 | MTR_5g077510 | 26.559 | 433 | 268 | 17 | 11 | 416 | 33 | 442 | 9.31e-37 | 139 |
| MS.gene049312.t1 | MTR_6g071340 | 26.540 | 422 | 268 | 15 | 11 | 405 | 3 | 409 | 2.26e-36 | 138 |
| MS.gene049312.t1 | MTR_5g015210 | 29.851 | 402 | 253 | 9 | 1 | 398 | 58 | 434 | 1.88e-35 | 136 |
| MS.gene049312.t1 | MTR_5g048050 | 26.066 | 422 | 270 | 15 | 11 | 405 | 23 | 429 | 3.66e-33 | 129 |
| MS.gene049312.t1 | MTR_2g087350 | 27.949 | 390 | 265 | 8 | 11 | 394 | 4 | 383 | 5.97e-32 | 125 |
| MS.gene049312.t1 | MTR_1g056880 | 28.182 | 440 | 265 | 15 | 11 | 416 | 5 | 427 | 8.19e-29 | 117 |
| MS.gene049312.t1 | MTR_1g017770 | 27.089 | 395 | 257 | 9 | 13 | 398 | 45 | 417 | 2.94e-28 | 115 |
| MS.gene049312.t1 | MTR_1g056870 | 27.955 | 440 | 266 | 15 | 11 | 416 | 5 | 427 | 4.11e-28 | 115 |
| MS.gene049312.t1 | MTR_4g063800 | 29.219 | 397 | 240 | 14 | 12 | 393 | 254 | 624 | 5.25e-28 | 117 |
| MS.gene049312.t1 | MTR_3g065080 | 23.278 | 421 | 282 | 12 | 11 | 409 | 34 | 435 | 4.98e-27 | 112 |
| MS.gene049312.t1 | MTR_4g485520 | 27.072 | 362 | 218 | 13 | 10 | 351 | 102 | 437 | 5.57e-26 | 109 |
| MS.gene049312.t1 | MTR_2g018010 | 25.701 | 428 | 253 | 14 | 1 | 396 | 280 | 674 | 6.99e-26 | 110 |
| MS.gene049312.t1 | MTR_4g485520 | 27.072 | 362 | 218 | 13 | 10 | 351 | 270 | 605 | 1.42e-25 | 109 |
| MS.gene049312.t1 | MTR_4g085720 | 26.866 | 402 | 263 | 12 | 7 | 396 | 8 | 390 | 6.13e-24 | 103 |
| MS.gene049312.t1 | MTR_7g059405 | 25.743 | 404 | 248 | 12 | 13 | 397 | 264 | 634 | 1.56e-23 | 103 |
| MS.gene049312.t1 | MTR_1g056840 | 26.818 | 440 | 245 | 16 | 11 | 416 | 5 | 401 | 1.63e-23 | 102 |
| MS.gene049312.t1 | MTR_4g051515 | 25.666 | 413 | 280 | 14 | 11 | 406 | 4 | 406 | 2.07e-23 | 101 |
| MS.gene049312.t1 | MTR_3g096370 | 29.433 | 282 | 176 | 8 | 11 | 279 | 8 | 279 | 2.19e-22 | 98.6 |
| MS.gene049312.t1 | MTR_1g094215 | 27.056 | 377 | 222 | 12 | 13 | 363 | 64 | 413 | 4.11e-22 | 98.2 |
| MS.gene049312.t1 | MTR_1g094215 | 27.056 | 377 | 222 | 12 | 13 | 363 | 247 | 596 | 1.21e-21 | 97.8 |
| MS.gene049312.t1 | MTR_1g056910 | 24.623 | 398 | 281 | 11 | 11 | 400 | 4 | 390 | 1.62e-20 | 93.2 |
| MS.gene049312.t1 | MTR_7g078330 | 25.000 | 352 | 229 | 11 | 11 | 351 | 272 | 599 | 4.11e-20 | 93.2 |
| MS.gene049312.t1 | MTR_4g028960 | 49.275 | 69 | 35 | 0 | 11 | 79 | 278 | 346 | 5.80e-19 | 89.7 |
| MS.gene049312.t1 | MTR_4g107010 | 27.072 | 362 | 218 | 14 | 14 | 351 | 281 | 620 | 6.99e-19 | 89.4 |
| MS.gene049312.t1 | MTR_3g078160 | 23.325 | 403 | 268 | 12 | 14 | 396 | 276 | 657 | 1.24e-17 | 85.5 |
| MS.gene049312.t1 | MTR_3g078160 | 23.325 | 403 | 268 | 12 | 14 | 396 | 276 | 657 | 1.30e-17 | 85.5 |
| MS.gene049312.t1 | MTR_5g083030 | 24.267 | 375 | 229 | 12 | 9 | 351 | 289 | 640 | 1.95e-17 | 85.1 |
| MS.gene049312.t1 | MTR_4g091880 | 53.623 | 69 | 31 | 1 | 13 | 80 | 5 | 73 | 3.24e-17 | 83.2 |
| MS.gene049312.t1 | MTR_4g091880 | 53.623 | 69 | 31 | 1 | 13 | 80 | 5 | 73 | 3.24e-17 | 82.8 |
| MS.gene049312.t1 | MTR_7g053260 | 44.286 | 70 | 39 | 0 | 11 | 80 | 76 | 145 | 8.29e-16 | 79.3 |
| MS.gene049312.t1 | MTR_1g069845 | 40.541 | 74 | 44 | 0 | 6 | 79 | 117 | 190 | 1.18e-15 | 79.3 |
| MS.gene049312.t1 | MTR_7g097020 | 43.662 | 71 | 40 | 0 | 11 | 81 | 239 | 309 | 2.16e-15 | 79.0 |
| MS.gene049312.t1 | MTR_1g069845 | 42.029 | 69 | 40 | 0 | 11 | 79 | 243 | 311 | 2.22e-15 | 78.6 |
| MS.gene049312.t1 | MTR_1g069845 | 42.029 | 69 | 40 | 0 | 11 | 79 | 239 | 307 | 2.37e-15 | 78.6 |
| MS.gene049312.t1 | MTR_7g117890 | 24.765 | 319 | 200 | 10 | 17 | 329 | 259 | 543 | 3.87e-15 | 78.2 |
| MS.gene049312.t1 | MTR_5g034440 | 50.769 | 65 | 32 | 0 | 17 | 81 | 284 | 348 | 9.87e-15 | 76.6 |
| MS.gene049312.t1 | MTR_3g078160 | 48.438 | 64 | 33 | 0 | 14 | 77 | 276 | 339 | 7.70e-14 | 73.6 |
| MS.gene049312.t1 | MTR_3g085610 | 41.176 | 68 | 40 | 0 | 14 | 81 | 281 | 348 | 1.17e-13 | 73.6 |
| MS.gene049312.t1 | MTR_7g116600 | 48.485 | 66 | 34 | 0 | 14 | 79 | 79 | 144 | 1.30e-13 | 72.8 |
| MS.gene049312.t1 | MTR_1g093965 | 33.099 | 142 | 72 | 3 | 26 | 167 | 1 | 119 | 1.38e-13 | 69.7 |
| MS.gene049312.t1 | MTR_1g093995 | 32.394 | 142 | 73 | 3 | 26 | 167 | 1 | 119 | 9.29e-13 | 67.4 |
| MS.gene049312.t1 | MTR_3g466220 | 41.667 | 72 | 42 | 0 | 11 | 82 | 231 | 302 | 1.19e-12 | 70.1 |
| MS.gene049312.t1 | MTR_3g466220 | 41.667 | 72 | 42 | 0 | 11 | 82 | 210 | 281 | 1.23e-12 | 70.1 |
| MS.gene049312.t1 | MTR_2g011140 | 50.000 | 60 | 30 | 0 | 17 | 76 | 19 | 78 | 2.16e-12 | 68.6 |
| MS.gene049312.t1 | MTR_7g077780 | 42.029 | 69 | 40 | 0 | 14 | 82 | 827 | 895 | 2.98e-12 | 68.9 |
| MS.gene049312.t1 | MTR_1g079450 | 40.845 | 71 | 42 | 0 | 9 | 79 | 59 | 129 | 5.52e-12 | 67.8 |
| MS.gene049312.t1 | MTR_8g077205 | 43.478 | 69 | 39 | 0 | 11 | 79 | 161 | 229 | 7.94e-12 | 67.4 |
| MS.gene049312.t1 | MTR_8g077205 | 43.478 | 69 | 39 | 0 | 11 | 79 | 273 | 341 | 8.47e-12 | 67.4 |
| MS.gene049312.t1 | MTR_8g080280 | 38.235 | 68 | 42 | 0 | 14 | 81 | 283 | 350 | 1.10e-11 | 67.0 |
| MS.gene049312.t1 | MTR_3g008270 | 45.455 | 66 | 35 | 1 | 14 | 79 | 731 | 795 | 1.59e-11 | 66.6 |
| MS.gene049312.t1 | MTR_5g020570 | 39.130 | 69 | 42 | 0 | 11 | 79 | 271 | 339 | 1.72e-11 | 66.6 |
| MS.gene049312.t1 | MTR_1g100820 | 43.284 | 67 | 38 | 0 | 13 | 79 | 646 | 712 | 1.89e-11 | 66.2 |
| MS.gene049312.t1 | MTR_1g100820 | 43.284 | 67 | 38 | 0 | 13 | 79 | 648 | 714 | 1.92e-11 | 66.2 |
| MS.gene049312.t1 | MTR_5g020570 | 39.130 | 69 | 42 | 0 | 11 | 79 | 286 | 354 | 1.95e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049312.t1 | AT5G64660 | 51.168 | 428 | 178 | 7 | 8 | 416 | 5 | 420 | 8.39e-139 | 403 |
| MS.gene049312.t1 | AT5G09800 | 52.019 | 421 | 180 | 8 | 5 | 416 | 2 | 409 | 3.14e-130 | 381 |
| MS.gene049312.t1 | AT3G18710 | 49.289 | 422 | 182 | 13 | 11 | 416 | 10 | 415 | 6.87e-123 | 363 |
| MS.gene049312.t1 | AT2G35930 | 26.972 | 393 | 278 | 6 | 6 | 395 | 5 | 391 | 8.68e-36 | 136 |
| MS.gene049312.t1 | AT3G52450 | 27.143 | 420 | 268 | 10 | 7 | 394 | 1 | 414 | 1.90e-34 | 133 |
| MS.gene049312.t1 | AT1G66160 | 24.685 | 397 | 264 | 10 | 11 | 395 | 31 | 404 | 4.23e-33 | 129 |
| MS.gene049312.t1 | AT3G19380 | 27.320 | 388 | 256 | 10 | 7 | 381 | 8 | 382 | 3.10e-32 | 126 |
| MS.gene049312.t1 | AT3G49810 | 26.943 | 386 | 256 | 8 | 13 | 394 | 64 | 427 | 4.00e-29 | 118 |
| MS.gene049312.t1 | AT1G49780 | 26.824 | 425 | 285 | 9 | 7 | 416 | 8 | 421 | 4.24e-27 | 112 |
| MS.gene049312.t1 | AT3G46510 | 28.531 | 354 | 215 | 12 | 13 | 351 | 256 | 586 | 1.71e-26 | 112 |
| MS.gene049312.t1 | AT5G37490 | 25.799 | 407 | 266 | 14 | 11 | 400 | 29 | 416 | 2.70e-26 | 110 |
| MS.gene049312.t1 | AT3G54850 | 28.056 | 360 | 210 | 13 | 13 | 351 | 248 | 579 | 5.57e-25 | 107 |
| MS.gene049312.t1 | AT1G23030 | 25.980 | 408 | 251 | 17 | 11 | 402 | 239 | 611 | 1.95e-24 | 106 |
| MS.gene049312.t1 | AT2G28830 | 26.161 | 409 | 253 | 14 | 14 | 400 | 185 | 566 | 2.63e-23 | 102 |
| MS.gene049312.t1 | AT1G66160 | 22.922 | 397 | 255 | 11 | 11 | 395 | 31 | 388 | 3.25e-23 | 101 |
| MS.gene049312.t1 | AT1G71020 | 29.236 | 301 | 173 | 11 | 11 | 291 | 93 | 373 | 1.66e-22 | 99.8 |
| MS.gene049312.t1 | AT1G71020 | 29.236 | 301 | 173 | 11 | 11 | 291 | 241 | 521 | 3.48e-22 | 99.4 |
| MS.gene049312.t1 | AT4G21350 | 25.445 | 393 | 255 | 10 | 9 | 392 | 1 | 364 | 3.46e-21 | 94.7 |
| MS.gene049312.t1 | AT1G29340 | 24.943 | 437 | 262 | 14 | 1 | 405 | 293 | 695 | 2.76e-20 | 94.0 |
| MS.gene049312.t1 | AT5G42340 | 28.159 | 277 | 175 | 10 | 11 | 280 | 288 | 547 | 1.79e-19 | 91.3 |
| MS.gene049312.t1 | AT3G11840 | 23.310 | 429 | 273 | 10 | 11 | 393 | 8 | 426 | 4.05e-19 | 89.4 |
| MS.gene049312.t1 | AT5G65920 | 53.731 | 67 | 31 | 0 | 13 | 79 | 60 | 126 | 6.99e-18 | 85.9 |
| MS.gene049312.t1 | AT5G65920 | 26.904 | 197 | 139 | 2 | 198 | 394 | 232 | 423 | 1.96e-11 | 65.9 |
| MS.gene049312.t1 | AT5G65920 | 53.731 | 67 | 31 | 0 | 13 | 79 | 60 | 126 | 6.99e-18 | 85.9 |
| MS.gene049312.t1 | AT5G65920 | 26.904 | 197 | 139 | 2 | 198 | 394 | 232 | 423 | 1.96e-11 | 65.9 |
| MS.gene049312.t1 | AT5G01830 | 50.746 | 67 | 33 | 0 | 13 | 79 | 274 | 340 | 1.53e-17 | 85.5 |
| MS.gene049312.t1 | AT3G54790 | 40.278 | 72 | 43 | 0 | 11 | 82 | 200 | 271 | 1.44e-16 | 82.4 |
| MS.gene049312.t1 | AT3G54790 | 40.278 | 72 | 43 | 0 | 11 | 82 | 236 | 307 | 1.87e-16 | 82.0 |
| MS.gene049312.t1 | AT3G54790 | 40.278 | 72 | 43 | 0 | 11 | 82 | 236 | 307 | 1.87e-16 | 82.0 |
| MS.gene049312.t1 | AT3G07360 | 43.478 | 69 | 39 | 0 | 11 | 79 | 72 | 140 | 2.63e-15 | 77.8 |
| MS.gene049312.t1 | AT1G67530 | 44.118 | 68 | 38 | 0 | 14 | 81 | 273 | 340 | 8.67e-14 | 73.9 |
| MS.gene049312.t1 | AT1G67530 | 44.118 | 68 | 38 | 0 | 14 | 81 | 273 | 340 | 8.67e-14 | 73.9 |
| MS.gene049312.t1 | AT1G67530 | 44.118 | 68 | 38 | 0 | 14 | 81 | 273 | 340 | 8.67e-14 | 73.9 |
| MS.gene049312.t1 | AT1G67530 | 44.118 | 68 | 38 | 0 | 14 | 81 | 273 | 340 | 9.55e-14 | 73.6 |
| MS.gene049312.t1 | AT1G10560 | 26.174 | 298 | 184 | 10 | 19 | 296 | 294 | 575 | 1.80e-13 | 72.8 |
| MS.gene049312.t1 | AT1G24330 | 42.647 | 68 | 39 | 0 | 14 | 81 | 276 | 343 | 1.93e-13 | 72.8 |
| MS.gene049312.t1 | AT1G24330 | 42.647 | 68 | 39 | 0 | 14 | 81 | 276 | 343 | 1.93e-13 | 72.8 |
| MS.gene049312.t1 | AT1G01660 | 43.939 | 66 | 37 | 0 | 14 | 79 | 498 | 563 | 2.49e-13 | 72.0 |
| MS.gene049312.t1 | AT1G01660 | 43.939 | 66 | 37 | 0 | 14 | 79 | 499 | 564 | 2.63e-13 | 72.0 |
| MS.gene049312.t1 | AT1G27910 | 42.647 | 68 | 39 | 0 | 14 | 81 | 280 | 347 | 2.31e-12 | 69.3 |
| MS.gene049312.t1 | AT5G18330 | 22.969 | 357 | 240 | 10 | 11 | 355 | 63 | 396 | 6.03e-12 | 67.4 |
| MS.gene049312.t1 | AT2G23140 | 44.444 | 63 | 35 | 0 | 17 | 79 | 237 | 299 | 2.21e-11 | 66.2 |
| MS.gene049312.t1 | AT2G23140 | 44.444 | 63 | 35 | 0 | 17 | 79 | 234 | 296 | 2.26e-11 | 66.2 |
| MS.gene049312.t1 | AT2G23140 | 44.444 | 63 | 35 | 0 | 17 | 79 | 234 | 296 | 2.26e-11 | 66.2 |
| MS.gene049312.t1 | AT2G23140 | 44.444 | 63 | 35 | 0 | 17 | 79 | 45 | 107 | 2.84e-11 | 65.9 |
| MS.gene049312.t1 | AT2G23140 | 44.444 | 63 | 35 | 0 | 17 | 79 | 45 | 107 | 2.84e-11 | 65.9 |
Find 90 sgRNAs with CRISPR-Local
Find 95 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGCATAATATGTGAAGTTT+TGG | 0.276591 | 3.1:-76307860 | None:intergenic |
| CATAAAATGCTTGGATTCAA+TGG | 0.293038 | 3.1:+76307210 | MS.gene049312:CDS |
| AAACAGAAACTGGTGAAAAT+TGG | 0.295758 | 3.1:+76307445 | MS.gene049312:CDS |
| GTCTAACCAGCGTTGGATAC+TGG | 0.313560 | 3.1:-76306759 | None:intergenic |
| AACGGTGTTAGGTTTGGTTC+TGG | 0.333260 | 3.1:+76307129 | MS.gene049312:CDS |
| TTCATAACGTCGAGTGAGAT+TGG | 0.354545 | 3.1:-76306695 | None:intergenic |
| GAACAGACTTTAACGGTGTT+AGG | 0.356980 | 3.1:+76307118 | MS.gene049312:CDS |
| ACACCGGTGCAAAGACTAAC+AGG | 0.363281 | 3.1:-76306722 | None:intergenic |
| ATTTCTTGAACAGACTTTAA+CGG | 0.373579 | 3.1:+76307111 | MS.gene049312:CDS |
| ACGGTTAGGTACAAAATCTT+TGG | 0.375445 | 3.1:-76306825 | None:intergenic |
| AGTTTCTGTTTGTTCCGTTT+CGG | 0.376803 | 3.1:-76307433 | None:intergenic |
| TAAACCGAACCGGTTTAAAC+CGG | 0.401538 | 3.1:-76306969 | None:intergenic |
| GACTTTAACGGTGTTAGGTT+TGG | 0.408394 | 3.1:+76307123 | MS.gene049312:CDS |
| GAACCGAATCGGTCCAGATC+TGG | 0.410843 | 3.1:-76306865 | None:intergenic |
| TCAAGAAAACTAACCATTAA+CGG | 0.410858 | 3.1:-76307067 | None:intergenic |
| GAAACGGAACAAACAGAAAC+TGG | 0.418763 | 3.1:+76307435 | MS.gene049312:CDS |
| CTAATTTCGCGAGAAAAGTT+CGG | 0.427400 | 3.1:-76307033 | None:intergenic |
| GAAGCAGTTACGATGGCTAA+TGG | 0.436021 | 3.1:+76307718 | MS.gene049312:CDS |
| GTGTGAAGACGCGGGGTTTG+TGG | 0.454044 | 3.1:+76307591 | MS.gene049312:CDS |
| TAGCCTCATCCGGTTTAAAC+CGG | 0.457213 | 3.1:+76306960 | MS.gene049312:CDS |
| GGGAAGTATTTGCATGGTGG+CGG | 0.461122 | 3.1:-76306801 | None:intergenic |
| CGAAGATAGATTCAGCAATT+CGG | 0.463703 | 3.1:-76307350 | None:intergenic |
| TCATAACGTCGAGTGAGATT+GGG | 0.470373 | 3.1:-76306694 | None:intergenic |
| CTTTCGTGATTAAACCGAAC+CGG | 0.470487 | 3.1:-76306979 | None:intergenic |
| CATCCAGATCTGGACCGATT+CGG | 0.478094 | 3.1:+76306862 | MS.gene049312:CDS |
| GGTTCATCACCGGGTCGAAC+CGG | 0.478104 | 3.1:+76306883 | MS.gene049312:CDS |
| TACATAGTCTCATCCAGATC+TGG | 0.479419 | 3.1:+76306852 | MS.gene049312:CDS |
| CTAAGTCGGTGATGGTTTGA+AGG | 0.487003 | 3.1:-76306940 | None:intergenic |
| GGAAGTATTTGCATGGTGGC+GGG | 0.489867 | 3.1:-76306800 | None:intergenic |
| GAAGGTGACCGTGGTGGAGA+AGG | 0.494216 | 3.1:+76307516 | MS.gene049312:CDS |
| GGACCGATTCGGTTCATCAC+CGG | 0.498704 | 3.1:+76306873 | MS.gene049312:CDS |
| TGAGATTGGGCATTTGAAGA+AGG | 0.502277 | 3.1:-76306681 | None:intergenic |
| GATTGGGCATTTGAAGAAGG+TGG | 0.504488 | 3.1:-76306678 | None:intergenic |
| GACCGATTCGGTTCATCACC+GGG | 0.508430 | 3.1:+76306874 | MS.gene049312:CDS |
| TTGAAGAACCTTGTGTTGAA+AGG | 0.511575 | 3.1:+76307175 | MS.gene049312:CDS |
| TCATCCGGTTTAAACCGGTT+CGG | 0.515676 | 3.1:+76306965 | MS.gene049312:CDS |
| CGGCGATACTGAATAAGATT+CGG | 0.518377 | 3.1:+76307614 | MS.gene049312:CDS |
| GGTGGAGAAGGCGTTGAAGC+TGG | 0.521064 | 3.1:+76307528 | MS.gene049312:CDS |
| ATCAGCTTCGAATCATTCTC+CGG | 0.528248 | 3.1:-76307373 | None:intergenic |
| GTTAGGTACAAAATCTTTGG+TGG | 0.531775 | 3.1:-76306822 | None:intergenic |
| CCAATCTCCATAAATCAAAA+CGG | 0.532788 | 3.1:-76307880 | None:intergenic |
| TGTTCTTTCCTTTCAACACA+AGG | 0.541607 | 3.1:-76307183 | None:intergenic |
| AGACTATGTAGAGTACGGTT+AGG | 0.544129 | 3.1:-76306839 | None:intergenic |
| ATCACCGACTTAGCCTCATC+CGG | 0.544356 | 3.1:+76306950 | MS.gene049312:CDS |
| AACAACTCTTTCTCTAACCA+TGG | 0.546792 | 3.1:-76306636 | None:intergenic |
| TCCCCTGTTAGTCTTTGCAC+CGG | 0.548826 | 3.1:+76306719 | MS.gene049312:CDS |
| TTATCTGTTTCGCGATCAGA+AGG | 0.551420 | 3.1:+76307690 | MS.gene049312:CDS |
| TAGCAATCTCAAAACCGAAA+CGG | 0.555669 | 3.1:+76307419 | MS.gene049312:CDS |
| ACAGCGTCTTCAACGAGTGA+AGG | 0.557046 | 3.1:+76307556 | MS.gene049312:CDS |
| GAGAAAAGTTCGGTTCTGAT+CGG | 0.560096 | 3.1:-76307023 | None:intergenic |
| GTACACATTTGTCGAACTTG+TGG | 0.562241 | 3.1:-76307781 | None:intergenic |
| GACCCGGTGATGAACCGAAT+CGG | 0.567434 | 3.1:-76306876 | None:intergenic |
| AAGAGAGATGTGTGAAGACG+CGG | 0.568054 | 3.1:+76307582 | MS.gene049312:CDS |
| AGAGAGATGTGTGAAGACGC+GGG | 0.574075 | 3.1:+76307583 | MS.gene049312:CDS |
| ATTGGGCATTTGAAGAAGGT+GGG | 0.577047 | 3.1:-76306677 | None:intergenic |
| TTGGATACTGGAACGGTCGT+AGG | 0.577907 | 3.1:-76306747 | None:intergenic |
| AGCGATGAATTTCAAAACCC+TGG | 0.578181 | 3.1:-76307278 | None:intergenic |
| CAGCGTCTTCAACGAGTGAA+GGG | 0.578889 | 3.1:+76307557 | MS.gene049312:CDS |
| GGATGAGACTATGTAGAGTA+CGG | 0.580632 | 3.1:-76306844 | None:intergenic |
| ATTGCTGAATCTATCTTCGC+CGG | 0.591644 | 3.1:+76307354 | MS.gene049312:CDS |
| TACCGTCGTCTAACCAGCGT+TGG | 0.592830 | 3.1:-76306766 | None:intergenic |
| GAACCGGTTTAAACCGGATG+AGG | 0.595940 | 3.1:-76306963 | None:intergenic |
| TGTTCATTAGAAAGAACTGA+AGG | 0.601064 | 3.1:-76306914 | None:intergenic |
| GTGAAACGACCGGTTCGACC+CGG | 0.612430 | 3.1:-76306892 | None:intergenic |
| AGAACTGAAGGTGAAACGAC+CGG | 0.616111 | 3.1:-76306902 | None:intergenic |
| GGATGAGGCTAAGTCGGTGA+TGG | 0.616650 | 3.1:-76306948 | None:intergenic |
| TTAGGTACAAAATCTTTGGT+GGG | 0.617972 | 3.1:-76306821 | None:intergenic |
| TAAACCGGATGAGGCTAAGT+CGG | 0.629808 | 3.1:-76306954 | None:intergenic |
| ACAAGTTCGACAAATGTGTA+CGG | 0.630403 | 3.1:+76307783 | MS.gene049312:CDS |
| TTCAAGAATCACAACCACCA+GGG | 0.633736 | 3.1:+76307261 | MS.gene049312:CDS |
| TGAAGACGCGGGGTTTGTGG+CGG | 0.634262 | 3.1:+76307594 | MS.gene049312:CDS |
| GGAACGGTCGTAGGTGACAC+CGG | 0.634285 | 3.1:-76306738 | None:intergenic |
| TTTGGTGGGAAGTATTTGCA+TGG | 0.634607 | 3.1:-76306807 | None:intergenic |
| AGAGTCTAATACGAGCGTGA+AGG | 0.640411 | 3.1:+76307498 | MS.gene049312:CDS |
| GAATGTATCGAACGTTGCGA+CGG | 0.642403 | 3.1:+76307636 | MS.gene049312:CDS |
| ATTCAAGAATCACAACCACC+AGG | 0.646164 | 3.1:+76307260 | MS.gene049312:CDS |
| AGCACGCAGTAACGACGCTG+TGG | 0.651564 | 3.1:+76307659 | MS.gene049312:CDS |
| GAGAGATGTGTGAAGACGCG+GGG | 0.656707 | 3.1:+76307584 | MS.gene049312:CDS |
| GGTGGGAAGTATTTGCATGG+TGG | 0.659091 | 3.1:-76306804 | None:intergenic |
| GGAGAAGGCGTTGAAGCTGG+TGG | 0.660376 | 3.1:+76307531 | MS.gene049312:CDS |
| GGCACAAGAAGCAGTTACGA+TGG | 0.662587 | 3.1:+76307711 | MS.gene049312:CDS |
| TACGAGCGTGAAGGTGACCG+TGG | 0.665169 | 3.1:+76307507 | MS.gene049312:CDS |
| ACCAGCGTTGGATACTGGAA+CGG | 0.669208 | 3.1:-76306754 | None:intergenic |
| CACCGGTGCAAAGACTAACA+GGG | 0.672559 | 3.1:-76306721 | None:intergenic |
| GAGCGTGAAGGTGACCGTGG+TGG | 0.673784 | 3.1:+76307510 | MS.gene049312:CDS |
| ACCGTTCCAGTATCCAACGC+TGG | 0.677562 | 3.1:+76306753 | MS.gene049312:CDS |
| ACCGGTGCAAAGACTAACAG+GGG | 0.687573 | 3.1:-76306720 | None:intergenic |
| GATGAATTTCAAAACCCTGG+TGG | 0.695060 | 3.1:-76307275 | None:intergenic |
| CTTCAACGCCTTCTCCACCA+CGG | 0.698423 | 3.1:-76307524 | None:intergenic |
| ATCCAACGCTGGTTAGACGA+CGG | 0.729186 | 3.1:+76306764 | MS.gene049312:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ATTTCTTGAACAGACTTTAA+CGG | + | chr3.1:76307111-76307130 | MS.gene049312:CDS | 25.0% |
| ! | GAACAAAAACATAAAATGCT+TGG | + | chr3.1:76307201-76307220 | MS.gene049312:CDS | 25.0% |
| ! | TCAAGAAAACTAACCATTAA+CGG | - | chr3.1:76307070-76307089 | None:intergenic | 25.0% |
| !!! | ATGGTTCTTGTTTTACAAAA+AGG | + | chr3.1:76307229-76307248 | MS.gene049312:CDS | 25.0% |
| AAACAGAAACTGGTGAAAAT+TGG | + | chr3.1:76307445-76307464 | MS.gene049312:CDS | 30.0% | |
| CATAAAATGCTTGGATTCAA+TGG | + | chr3.1:76307210-76307229 | MS.gene049312:CDS | 30.0% | |
| GAAAAAATTGAAGATCGTGA+AGG | + | chr3.1:76307151-76307170 | MS.gene049312:CDS | 30.0% | |
| TGTTCATTAGAAAGAACTGA+AGG | - | chr3.1:76306917-76306936 | None:intergenic | 30.0% | |
| TTAGGTACAAAATCTTTGGT+GGG | - | chr3.1:76306824-76306843 | None:intergenic | 30.0% | |
| !! | CGGATTTGCTTAAGATTTTT+CGG | + | chr3.1:76307803-76307822 | MS.gene049312:CDS | 30.0% |
| !! | GGATTTGCTTAAGATTTTTC+GGG | + | chr3.1:76307804-76307823 | MS.gene049312:CDS | 30.0% |
| ACAAGTTCGACAAATGTGTA+CGG | + | chr3.1:76307783-76307802 | MS.gene049312:CDS | 35.0% | |
| ACGGTTAGGTACAAAATCTT+TGG | - | chr3.1:76306828-76306847 | None:intergenic | 35.0% | |
| AGTTTCTGTTTGTTCCGTTT+CGG | - | chr3.1:76307436-76307455 | None:intergenic | 35.0% | |
| CGAAGATAGATTCAGCAATT+CGG | - | chr3.1:76307353-76307372 | None:intergenic | 35.0% | |
| CTAATTTCGCGAGAAAAGTT+CGG | - | chr3.1:76307036-76307055 | None:intergenic | 35.0% | |
| GTTAGGTACAAAATCTTTGG+TGG | - | chr3.1:76306825-76306844 | None:intergenic | 35.0% | |
| TAGCAATCTCAAAACCGAAA+CGG | + | chr3.1:76307419-76307438 | MS.gene049312:CDS | 35.0% | |
| TGTTCTTTCCTTTCAACACA+AGG | - | chr3.1:76307186-76307205 | None:intergenic | 35.0% | |
| TTGAAGAACCTTGTGTTGAA+AGG | + | chr3.1:76307175-76307194 | MS.gene049312:CDS | 35.0% | |
| ! | ACTTTTCTCGCGAAATTAGA+CGG | + | chr3.1:76307037-76307056 | MS.gene049312:CDS | 35.0% |
| ! | CGGCATAATATGTGAAGTTT+TGG | - | chr3.1:76307863-76307882 | None:intergenic | 35.0% |
| !!! | AGACGGTTTTATTCCGTTAA+TGG | + | chr3.1:76307054-76307073 | MS.gene049312:CDS | 35.0% |
| AGACTATGTAGAGTACGGTT+AGG | - | chr3.1:76306842-76306861 | None:intergenic | 40.0% | |
| AGCGATGAATTTCAAAACCC+TGG | - | chr3.1:76307281-76307300 | None:intergenic | 40.0% | |
| ATCAGCTTCGAATCATTCTC+CGG | - | chr3.1:76307376-76307395 | None:intergenic | 40.0% | |
| ATTCAAGAATCACAACCACC+AGG | + | chr3.1:76307260-76307279 | MS.gene049312:CDS | 40.0% | |
| ATTGCTGAATCTATCTTCGC+CGG | + | chr3.1:76307354-76307373 | MS.gene049312:CDS | 40.0% | |
| ATTGGGCATTTGAAGAAGGT+GGG | - | chr3.1:76306680-76306699 | None:intergenic | 40.0% | |
| CGGCGATACTGAATAAGATT+CGG | + | chr3.1:76307614-76307633 | MS.gene049312:CDS | 40.0% | |
| CTTTCGTGATTAAACCGAAC+CGG | - | chr3.1:76306982-76307001 | None:intergenic | 40.0% | |
| GAAACGGAACAAACAGAAAC+TGG | + | chr3.1:76307435-76307454 | MS.gene049312:CDS | 40.0% | |
| GAACAGACTTTAACGGTGTT+AGG | + | chr3.1:76307118-76307137 | MS.gene049312:CDS | 40.0% | |
| GATGAATTTCAAAACCCTGG+TGG | - | chr3.1:76307278-76307297 | None:intergenic | 40.0% | |
| GGATGAGACTATGTAGAGTA+CGG | - | chr3.1:76306847-76306866 | None:intergenic | 40.0% | |
| GTACACATTTGTCGAACTTG+TGG | - | chr3.1:76307784-76307803 | None:intergenic | 40.0% | |
| TACATAGTCTCATCCAGATC+TGG | + | chr3.1:76306852-76306871 | MS.gene049312:CDS | 40.0% | |
| TCATAACGTCGAGTGAGATT+GGG | - | chr3.1:76306697-76306716 | None:intergenic | 40.0% | |
| TGAGATTGGGCATTTGAAGA+AGG | - | chr3.1:76306684-76306703 | None:intergenic | 40.0% | |
| TTATCTGTTTCGCGATCAGA+AGG | + | chr3.1:76307690-76307709 | MS.gene049312:CDS | 40.0% | |
| TTCAAGAATCACAACCACCA+GGG | + | chr3.1:76307261-76307280 | MS.gene049312:CDS | 40.0% | |
| TTCATAACGTCGAGTGAGAT+TGG | - | chr3.1:76306698-76306717 | None:intergenic | 40.0% | |
| ! | GACTTTAACGGTGTTAGGTT+TGG | + | chr3.1:76307123-76307142 | MS.gene049312:CDS | 40.0% |
| ! | GAGAAAAGTTCGGTTCTGAT+CGG | - | chr3.1:76307026-76307045 | None:intergenic | 40.0% |
| ! | TAAACCGAACCGGTTTAAAC+CGG | - | chr3.1:76306972-76306991 | None:intergenic | 40.0% |
| !! | TTTGGTGGGAAGTATTTGCA+TGG | - | chr3.1:76306810-76306829 | None:intergenic | 40.0% |
| AAGAGAGATGTGTGAAGACG+CGG | + | chr3.1:76307582-76307601 | MS.gene049312:CDS | 45.0% | |
| AGAACTGAAGGTGAAACGAC+CGG | - | chr3.1:76306905-76306924 | None:intergenic | 45.0% | |
| AGAGTCTAATACGAGCGTGA+AGG | + | chr3.1:76307498-76307517 | MS.gene049312:CDS | 45.0% | |
| GAAGCAGTTACGATGGCTAA+TGG | + | chr3.1:76307718-76307737 | MS.gene049312:CDS | 45.0% | |
| GAATGTATCGAACGTTGCGA+CGG | + | chr3.1:76307636-76307655 | MS.gene049312:CDS | 45.0% | |
| GATTGGGCATTTGAAGAAGG+TGG | - | chr3.1:76306681-76306700 | None:intergenic | 45.0% | |
| TAAACCGGATGAGGCTAAGT+CGG | - | chr3.1:76306957-76306976 | None:intergenic | 45.0% | |
| TAGCCTCATCCGGTTTAAAC+CGG | + | chr3.1:76306960-76306979 | MS.gene049312:CDS | 45.0% | |
| TCATCCGGTTTAAACCGGTT+CGG | + | chr3.1:76306965-76306984 | MS.gene049312:CDS | 45.0% | |
| ! | AACGGTGTTAGGTTTGGTTC+TGG | + | chr3.1:76307129-76307148 | MS.gene049312:CDS | 45.0% |
| ! | CTAAGTCGGTGATGGTTTGA+AGG | - | chr3.1:76306943-76306962 | None:intergenic | 45.0% |
| ACACCGGTGCAAAGACTAAC+AGG | - | chr3.1:76306725-76306744 | None:intergenic | 50.0% | |
| ACAGCGTCTTCAACGAGTGA+AGG | + | chr3.1:76307556-76307575 | MS.gene049312:CDS | 50.0% | |
| ACCGGTGCAAAGACTAACAG+GGG | - | chr3.1:76306723-76306742 | None:intergenic | 50.0% | |
| AGAGAGATGTGTGAAGACGC+GGG | + | chr3.1:76307583-76307602 | MS.gene049312:CDS | 50.0% | |
| CACCGGTGCAAAGACTAACA+GGG | - | chr3.1:76306724-76306743 | None:intergenic | 50.0% | |
| CAGCGTCTTCAACGAGTGAA+GGG | + | chr3.1:76307557-76307576 | MS.gene049312:CDS | 50.0% | |
| CATCCAGATCTGGACCGATT+CGG | + | chr3.1:76306862-76306881 | MS.gene049312:CDS | 50.0% | |
| GGCACAAGAAGCAGTTACGA+TGG | + | chr3.1:76307711-76307730 | MS.gene049312:CDS | 50.0% | |
| TTGGATACTGGAACGGTCGT+AGG | - | chr3.1:76306750-76306769 | None:intergenic | 50.0% | |
| ! | ACCAGCGTTGGATACTGGAA+CGG | - | chr3.1:76306757-76306776 | None:intergenic | 50.0% |
| ! | ATCCAACGCTGGTTAGACGA+CGG | + | chr3.1:76306764-76306783 | MS.gene049312:CDS | 50.0% |
| ! | GAACCGGTTTAAACCGGATG+AGG | - | chr3.1:76306966-76306985 | None:intergenic | 50.0% |
| ! | GTCTAACCAGCGTTGGATAC+TGG | - | chr3.1:76306762-76306781 | None:intergenic | 50.0% |
| !! | ATCACCGACTTAGCCTCATC+CGG | + | chr3.1:76306950-76306969 | MS.gene049312:CDS | 50.0% |
| !! | GGAAGTATTTGCATGGTGGC+GGG | - | chr3.1:76306803-76306822 | None:intergenic | 50.0% |
| !! | GGGAAGTATTTGCATGGTGG+CGG | - | chr3.1:76306804-76306823 | None:intergenic | 50.0% |
| !! | GGTGGGAAGTATTTGCATGG+TGG | - | chr3.1:76306807-76306826 | None:intergenic | 50.0% |
| !! | TCCCCTGTTAGTCTTTGCAC+CGG | + | chr3.1:76306719-76306738 | MS.gene049312:CDS | 50.0% |
| ACCGTTCCAGTATCCAACGC+TGG | + | chr3.1:76306753-76306772 | MS.gene049312:CDS | 55.0% | |
| CTTCAACGCCTTCTCCACCA+CGG | - | chr3.1:76307527-76307546 | None:intergenic | 55.0% | |
| GAACCGAATCGGTCCAGATC+TGG | - | chr3.1:76306868-76306887 | None:intergenic | 55.0% | |
| GACCCGGTGATGAACCGAAT+CGG | - | chr3.1:76306879-76306898 | None:intergenic | 55.0% | |
| GAGAGATGTGTGAAGACGCG+GGG | + | chr3.1:76307584-76307603 | MS.gene049312:CDS | 55.0% | |
| GGATGAGGCTAAGTCGGTGA+TGG | - | chr3.1:76306951-76306970 | None:intergenic | 55.0% | |
| TACCGTCGTCTAACCAGCGT+TGG | - | chr3.1:76306769-76306788 | None:intergenic | 55.0% | |
| !! | GACCGATTCGGTTCATCACC+GGG | + | chr3.1:76306874-76306893 | MS.gene049312:CDS | 55.0% |
| !! | GGACCGATTCGGTTCATCAC+CGG | + | chr3.1:76306873-76306892 | MS.gene049312:CDS | 55.0% |
| AGCACGCAGTAACGACGCTG+TGG | + | chr3.1:76307659-76307678 | MS.gene049312:CDS | 60.0% | |
| GGAACGGTCGTAGGTGACAC+CGG | - | chr3.1:76306741-76306760 | None:intergenic | 60.0% | |
| GGTTCATCACCGGGTCGAAC+CGG | + | chr3.1:76306883-76306902 | MS.gene049312:CDS | 60.0% | |
| GTGTGAAGACGCGGGGTTTG+TGG | + | chr3.1:76307591-76307610 | MS.gene049312:CDS | 60.0% | |
| TACGAGCGTGAAGGTGACCG+TGG | + | chr3.1:76307507-76307526 | MS.gene049312:CDS | 60.0% | |
| TGAAGACGCGGGGTTTGTGG+CGG | + | chr3.1:76307594-76307613 | MS.gene049312:CDS | 60.0% | |
| ! | GAAGGTGACCGTGGTGGAGA+AGG | + | chr3.1:76307516-76307535 | MS.gene049312:CDS | 60.0% |
| !! | GGAGAAGGCGTTGAAGCTGG+TGG | + | chr3.1:76307531-76307550 | MS.gene049312:CDS | 60.0% |
| !! | GGTGGAGAAGGCGTTGAAGC+TGG | + | chr3.1:76307528-76307547 | MS.gene049312:CDS | 60.0% |
| !! | GTGAAACGACCGGTTCGACC+CGG | - | chr3.1:76306895-76306914 | None:intergenic | 60.0% |
| GAGCGTGAAGGTGACCGTGG+TGG | + | chr3.1:76307510-76307529 | MS.gene049312:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 76306638 | 76307888 | 76306638 | ID=MS.gene049312 |
| chr3.1 | mRNA | 76306638 | 76307888 | 76306638 | ID=MS.gene049312.t1;Parent=MS.gene049312 |
| chr3.1 | exon | 76306638 | 76307888 | 76306638 | ID=MS.gene049312.t1.exon1;Parent=MS.gene049312.t1 |
| chr3.1 | CDS | 76306638 | 76307888 | 76306638 | ID=cds.MS.gene049312.t1;Parent=MS.gene049312.t1 |
| Gene Sequence |
| Protein sequence |
