Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08866.t1 | KEH20613.1 | 94.6 | 760 | 40 | 1 | 1 | 759 | 192 | 951 | 0.00E+00 | 1393.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08866.t1 | Q9FYG2 | 50.4 | 781 | 333 | 14 | 11 | 745 | 215 | 987 | 6.8e-187 | 655.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08866.t1 | A0A072TUT2 | 94.6 | 760 | 40 | 1 | 1 | 759 | 192 | 951 | 0.0e+00 | 1393.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049182 | MS.gene08866 | 0.817464 | 3.25E-52 | -1.69E-46 |
MS.gene051959 | MS.gene08866 | 0.87392 | 1.01E-67 | -1.69E-46 |
MS.gene051960 | MS.gene08866 | 0.876413 | 1.42E-68 | -1.69E-46 |
MS.gene057001 | MS.gene08866 | 0.873302 | 1.63E-67 | -1.69E-46 |
MS.gene057148 | MS.gene08866 | -0.807201 | 5.67E-50 | -1.69E-46 |
MS.gene05985 | MS.gene08866 | -0.802979 | 4.34E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08866.t1 | MTR_8g080800 | 96.113 | 746 | 28 | 1 | 1 | 745 | 192 | 937 | 0.0 | 1462 |
MS.gene08866.t1 | MTR_3g085050 | 60.134 | 745 | 245 | 8 | 21 | 742 | 201 | 916 | 0.0 | 825 |
MS.gene08866.t1 | MTR_3g085050 | 60.054 | 746 | 246 | 8 | 21 | 743 | 201 | 917 | 0.0 | 824 |
MS.gene08866.t1 | MTR_2g008840 | 41.973 | 598 | 263 | 19 | 197 | 742 | 399 | 964 | 2.30e-133 | 420 |
MS.gene08866.t1 | MTR_2g008840 | 41.973 | 598 | 263 | 19 | 197 | 742 | 439 | 1004 | 4.94e-133 | 420 |
MS.gene08866.t1 | MTR_8g090205 | 41.889 | 561 | 280 | 12 | 203 | 735 | 339 | 881 | 2.95e-130 | 410 |
MS.gene08866.t1 | MTR_8g090205 | 41.889 | 561 | 280 | 12 | 203 | 735 | 339 | 881 | 3.01e-130 | 409 |
MS.gene08866.t1 | MTR_8g090205 | 41.889 | 561 | 280 | 12 | 203 | 735 | 498 | 1040 | 9.65e-129 | 410 |
MS.gene08866.t1 | MTR_8g090205 | 41.889 | 561 | 280 | 12 | 203 | 735 | 496 | 1038 | 9.84e-129 | 409 |
MS.gene08866.t1 | MTR_8g090205 | 41.889 | 561 | 280 | 12 | 203 | 735 | 496 | 1038 | 1.10e-128 | 410 |
MS.gene08866.t1 | MTR_8g090205 | 41.889 | 561 | 280 | 12 | 203 | 735 | 498 | 1040 | 1.40e-128 | 409 |
MS.gene08866.t1 | MTR_4g094215 | 40.000 | 590 | 287 | 16 | 197 | 742 | 426 | 992 | 7.47e-123 | 393 |
MS.gene08866.t1 | MTR_4g094215 | 40.000 | 590 | 287 | 16 | 197 | 742 | 426 | 992 | 7.63e-123 | 393 |
MS.gene08866.t1 | MTR_2g008840 | 38.493 | 491 | 232 | 14 | 197 | 648 | 439 | 898 | 5.43e-94 | 313 |
MS.gene08866.t1 | MTR_8g090205 | 39.440 | 464 | 247 | 9 | 203 | 649 | 498 | 944 | 9.09e-94 | 313 |
MS.gene08866.t1 | MTR_2g034650 | 37.809 | 566 | 295 | 16 | 207 | 742 | 355 | 893 | 1.91e-89 | 301 |
MS.gene08866.t1 | MTR_4g094215 | 37.219 | 489 | 255 | 12 | 197 | 655 | 426 | 892 | 2.52e-88 | 298 |
MS.gene08866.t1 | MTR_4g121840 | 35.473 | 592 | 321 | 19 | 188 | 742 | 308 | 875 | 4.19e-87 | 294 |
MS.gene08866.t1 | MTR_4g121840 | 35.473 | 592 | 321 | 19 | 188 | 742 | 338 | 905 | 6.95e-87 | 294 |
MS.gene08866.t1 | MTR_8g090200 | 45.652 | 92 | 47 | 1 | 210 | 298 | 315 | 406 | 4.37e-20 | 94.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08866.t1 | AT1G67310 | 51.216 | 781 | 327 | 17 | 11 | 745 | 215 | 987 | 0.0 | 672 |
MS.gene08866.t1 | AT5G09410 | 41.796 | 579 | 270 | 18 | 201 | 735 | 281 | 836 | 6.16e-125 | 395 |
MS.gene08866.t1 | AT2G22300 | 41.593 | 565 | 261 | 13 | 201 | 735 | 396 | 921 | 4.75e-124 | 395 |
MS.gene08866.t1 | AT5G09410 | 41.796 | 579 | 270 | 18 | 201 | 735 | 402 | 957 | 1.70e-123 | 394 |
MS.gene08866.t1 | AT5G09410 | 41.796 | 579 | 270 | 18 | 201 | 735 | 384 | 939 | 1.78e-123 | 394 |
MS.gene08866.t1 | AT2G22300 | 41.593 | 565 | 261 | 13 | 201 | 735 | 454 | 979 | 2.66e-123 | 394 |
MS.gene08866.t1 | AT2G22300 | 41.593 | 565 | 261 | 13 | 201 | 735 | 454 | 979 | 2.66e-123 | 394 |
MS.gene08866.t1 | AT5G09410 | 41.796 | 579 | 270 | 18 | 201 | 735 | 461 | 1016 | 2.35e-122 | 392 |
MS.gene08866.t1 | AT5G64220 | 40.000 | 575 | 285 | 15 | 199 | 735 | 447 | 999 | 5.22e-122 | 391 |
MS.gene08866.t1 | AT5G64220 | 40.000 | 575 | 285 | 15 | 199 | 735 | 447 | 999 | 5.22e-122 | 391 |
MS.gene08866.t1 | AT3G16940 | 31.295 | 687 | 396 | 22 | 100 | 742 | 155 | 809 | 8.52e-81 | 275 |
MS.gene08866.t1 | AT3G16940 | 31.295 | 687 | 396 | 22 | 100 | 742 | 182 | 836 | 1.42e-80 | 275 |
MS.gene08866.t1 | AT3G16940 | 29.915 | 585 | 346 | 18 | 100 | 647 | 182 | 739 | 1.21e-57 | 210 |
Find 175 sgRNAs with CRISPR-Local
Find 364 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCACCATCTTCTTCATTAA+TGG | 0.149051 | 4.2:+13810288 | MS.gene08866:CDS |
AGAAACCTCAACTGACTTTA+AGG | 0.161755 | 4.2:+13808441 | MS.gene08866:CDS |
ATTATAGAGGCTCTACTATT+TGG | 0.207358 | 4.2:+13811650 | MS.gene08866:CDS |
GGAAGCATTACAAAGTATTA+TGG | 0.222235 | 4.2:+13813184 | MS.gene08866:CDS |
AATAATCCCCTGCTCTTTCT+TGG | 0.231755 | 4.2:-13811792 | None:intergenic |
AAAACAGAAATTTACTATTA+AGG | 0.252298 | 4.2:+13810625 | MS.gene08866:CDS |
CTTCATTGGGCTGCACGTTT+TGG | 0.253483 | 4.2:+13811911 | MS.gene08866:CDS |
GGGATTATTCACATGGTTGC+TGG | 0.262638 | 4.2:+13811806 | MS.gene08866:CDS |
CTGTTATTACTTGTTAGATT+TGG | 0.278401 | 4.2:+13811533 | MS.gene08866:CDS |
CTTTGTAATGCTTCCTAACT+TGG | 0.282011 | 4.2:-13813176 | None:intergenic |
CCCTTGATGATTCTGTGGTT+TGG | 0.285385 | 4.2:-13808566 | None:intergenic |
ACTTCCTCCATATTCTTCTA+TGG | 0.286754 | 4.2:+13810502 | MS.gene08866:CDS |
GTTACTCTGTGCATTACTTC+TGG | 0.291948 | 4.2:+13811401 | MS.gene08866:CDS |
GGAGAAAAGGAGTCGGTTTA+CGG | 0.298490 | 4.2:+13813244 | MS.gene08866:CDS |
ATGGGTGGACTGCCCTTCAT+TGG | 0.305451 | 4.2:+13811897 | MS.gene08866:CDS |
TCAGAGGAATAACCCCATTC+TGG | 0.307135 | 4.2:-13810656 | None:intergenic |
TTGTTTGACCAAAGCCAAAT+TGG | 0.322075 | 4.2:+13810563 | MS.gene08866:CDS |
AGTTCCTGTTGAGCTAATTC+AGG | 0.325656 | 4.2:+13811334 | MS.gene08866:CDS |
TTTGGCAGTGAAAATTCTTC+TGG | 0.330125 | 4.2:+13811668 | MS.gene08866:CDS |
GTCATCCCTCTGATTCTGCC+TGG | 0.330295 | 4.2:+13811288 | MS.gene08866:CDS |
TATCATGAGATGCTCCAATT+TGG | 0.331541 | 4.2:-13810577 | None:intergenic |
ATTCACATGGTTGCTGGGTT+GGG | 0.335295 | 4.2:+13811812 | MS.gene08866:CDS |
TTCACTTGTTTGTGCAAGTT+CGG | 0.338414 | 4.2:-13813715 | None:intergenic |
ATTATGGGCAGTTGGAATCT+TGG | 0.340243 | 4.2:+13813200 | MS.gene08866:CDS |
TGTTATTACTTGTTAGATTT+GGG | 0.340702 | 4.2:+13811534 | MS.gene08866:CDS |
GTTTCATCCATAGAAGAATA+TGG | 0.341126 | 4.2:-13810509 | None:intergenic |
TAAAATAGCCCCTGGTTATC+TGG | 0.347146 | 4.2:-13808628 | None:intergenic |
AGCTTCATGCTCGTTGTAGA+AGG | 0.349283 | 4.2:-13808533 | None:intergenic |
ATAGTAGAGCCTCTATAATA+TGG | 0.356170 | 4.2:-13811646 | None:intergenic |
GAAGTTCCATCTCACATTCC+TGG | 0.365550 | 4.2:+13811374 | MS.gene08866:CDS |
TTCATCTACTTCCCGAGATC+TGG | 0.365870 | 4.2:-13811750 | None:intergenic |
ATTCTTCTGGTACTATCAAT+TGG | 0.373127 | 4.2:+13811681 | MS.gene08866:CDS |
TGCAGCTAGCAGCGGGCATA+AGG | 0.374436 | 4.2:+13812303 | MS.gene08866:CDS |
TAACAGCTCATCTGGAGTTC+TGG | 0.376239 | 4.2:-13811516 | None:intergenic |
TATTCACATGGTTGCTGGGT+TGG | 0.377002 | 4.2:+13811811 | MS.gene08866:CDS |
CCAATTGGATCTTGTGCACT+TGG | 0.378723 | 4.2:-13812262 | None:intergenic |
ATGTGAGAGGTTACCAAGTT+AGG | 0.379390 | 4.2:+13813163 | MS.gene08866:CDS |
GAGAAAAGGAGTCGGTTTAC+GGG | 0.381739 | 4.2:+13813245 | MS.gene08866:CDS |
GTTGCATCACTTATAGCTTC+TGG | 0.385172 | 4.2:+13812214 | MS.gene08866:CDS |
CCATCCTGAATTAGCTCAAC+AGG | 0.389513 | 4.2:-13811338 | None:intergenic |
GCTTCTCTTTCCAATGGAGC+AGG | 0.391039 | 4.2:-13811491 | None:intergenic |
CATTTCCATCAGGGAAATCA+TGG | 0.392414 | 4.2:-13810094 | None:intergenic |
GAAGCATTACAAAGTATTAT+GGG | 0.396758 | 4.2:+13813185 | MS.gene08866:CDS |
ATAGCTTCTGGTGCATCTGC+TGG | 0.404064 | 4.2:+13812226 | MS.gene08866:CDS |
ATGCACAGAGTAACCTTTCC+AGG | 0.407884 | 4.2:-13811392 | None:intergenic |
CATCCATTGCAGCTAGCAGC+GGG | 0.408752 | 4.2:+13812296 | MS.gene08866:CDS |
ACAAGTAATAACAGCTCATC+TGG | 0.410138 | 4.2:-13811524 | None:intergenic |
GAGATGCTCCAATTTGGCTT+TGG | 0.415155 | 4.2:-13810571 | None:intergenic |
TGTGCATTACTTCTGGAAAC+CGG | 0.420398 | 4.2:+13811408 | MS.gene08866:CDS |
TCAAGCTTTGCGCCGATTGG+AGG | 0.420689 | 4.2:+13808468 | MS.gene08866:CDS |
ATTGGAGCATCTCATGATAC+TGG | 0.421227 | 4.2:+13810581 | MS.gene08866:CDS |
CTGGTGGCTTCTCTTTCCAA+TGG | 0.422838 | 4.2:-13811497 | None:intergenic |
TCACACCGCAACTGAGAATA+GGG | 0.423019 | 4.2:-13811853 | None:intergenic |
AGCAGGGTCGGTGAAATTCT+TGG | 0.425679 | 4.2:-13811474 | None:intergenic |
TACTCAAGCTTTGCGCCGAT+TGG | 0.428909 | 4.2:+13808465 | MS.gene08866:CDS |
GAGGAATCCACAGCTCTCTC+TGG | 0.431726 | 4.2:+13808604 | MS.gene08866:CDS |
TCTGCCTGGGCCTGTATGCT+TGG | 0.432274 | 4.2:+13811302 | MS.gene08866:CDS |
TGGGTGGACTGCCCTTCATT+GGG | 0.436536 | 4.2:+13811898 | MS.gene08866:CDS |
GGATTATTCACATGGTTGCT+GGG | 0.437285 | 4.2:+13811807 | MS.gene08866:CDS |
TTTCACCGACCCTGCTCCAT+TGG | 0.437455 | 4.2:+13811481 | MS.gene08866:CDS |
TAAGGCAGTCTCCCCAGAAT+GGG | 0.443176 | 4.2:+13810643 | MS.gene08866:CDS |
AGCGGGCATAAGGGACTGGC+AGG | 0.447828 | 4.2:+13812313 | MS.gene08866:CDS |
TGATATTGCTCACGAGCATC+AGG | 0.448217 | 4.2:-13813393 | None:intergenic |
CCATCTGTCATCTCTTACAC+TGG | 0.451970 | 4.2:+13812363 | MS.gene08866:CDS |
CAGAGGAATAACCCCATTCT+GGG | 0.453671 | 4.2:-13810655 | None:intergenic |
CAAAACGTGCAGCCCAATGA+AGG | 0.453699 | 4.2:-13811910 | None:intergenic |
AAGTAATGATAACAACGAAT+CGG | 0.457105 | 4.2:+13811583 | MS.gene08866:CDS |
GATCACATTCATTTAGAAAA+CGG | 0.457488 | 4.2:+13812554 | MS.gene08866:CDS |
ATAAATTTCCGTGATGTCAA+TGG | 0.460639 | 4.2:+13811878 | MS.gene08866:CDS |
AGAAGGCTGATGATGATTCA+TGG | 0.462726 | 4.2:+13811621 | MS.gene08866:CDS |
AGTAGATGTGGAAATTGAAA+AGG | 0.467562 | 4.2:+13813338 | MS.gene08866:CDS |
TCATCCCTCTGATTCTGCCT+GGG | 0.473426 | 4.2:+13811289 | MS.gene08866:CDS |
GTGCTAAGATGGCGGAGAAA+AGG | 0.474475 | 4.2:+13813231 | MS.gene08866:CDS |
TTCACACCGCAACTGAGAAT+AGG | 0.474658 | 4.2:-13811854 | None:intergenic |
TATATTCTTGTAGGTGATAG+TGG | 0.478429 | 4.2:+13810047 | MS.gene08866:intron |
CGTGGCTTACTTCCAGATCT+CGG | 0.478848 | 4.2:+13811738 | MS.gene08866:CDS |
TTCTTTGTCCAAGAAAGAGC+AGG | 0.480183 | 4.2:+13811784 | MS.gene08866:CDS |
GCTTCTTGAAGAGCTACTAA+AGG | 0.488943 | 4.2:+13811703 | MS.gene08866:CDS |
TTCAGAAGAAATATCGAGGT+TGG | 0.489389 | 4.2:+13812713 | MS.gene08866:CDS |
AGTAATGATAACAACGAATC+GGG | 0.494514 | 4.2:+13811584 | MS.gene08866:CDS |
GAAATGAAAAGGCTCTATCA+TGG | 0.494556 | 4.2:+13810111 | MS.gene08866:CDS |
TGACTTCACTGCATGACTCC+CGG | 0.494680 | 4.2:-13811427 | None:intergenic |
GCAACTGAGAATAGGGTTCA+AGG | 0.496854 | 4.2:-13811846 | None:intergenic |
TGGACAAGGTTGTGCTAAGA+TGG | 0.498360 | 4.2:+13813220 | MS.gene08866:CDS |
GCATCCATTGCAGCTAGCAG+CGG | 0.501501 | 4.2:+13812295 | MS.gene08866:CDS |
TAAATTTCCGTGATGTCAAT+GGG | 0.503471 | 4.2:+13811879 | MS.gene08866:CDS |
CTAGACCATGATTTCCCTGA+TGG | 0.505531 | 4.2:+13810089 | MS.gene08866:CDS |
TAGCAGCGGGCATAAGGGAC+TGG | 0.507308 | 4.2:+13812309 | MS.gene08866:CDS |
TTTCCCTGATGGAAATGAAA+AGG | 0.507835 | 4.2:+13810100 | MS.gene08866:CDS |
AATTTCAACACTGATAATGC+TGG | 0.508070 | 4.2:+13810346 | MS.gene08866:CDS |
ATCATCCCTTGATGATTCTG+TGG | 0.509626 | 4.2:-13808571 | None:intergenic |
AACTTAACTGCACCTCCAAT+CGG | 0.509739 | 4.2:-13808480 | None:intergenic |
TACAAAGTATTATGGGCAGT+TGG | 0.512430 | 4.2:+13813192 | MS.gene08866:CDS |
TGTATTTCTGACAGCAGCTA+AGG | 0.517159 | 4.2:-13812497 | None:intergenic |
GTGGCTTACTTCCAGATCTC+GGG | 0.517721 | 4.2:+13811739 | MS.gene08866:CDS |
ATGCCCGCTGCTAGCTGCAA+TGG | 0.519565 | 4.2:-13812299 | None:intergenic |
CGAACCCGGAAAACTATAGC+TGG | 0.519978 | 4.2:+13810320 | MS.gene08866:CDS |
CCAAGTGCACAAGATCCAAT+TGG | 0.522680 | 4.2:+13812262 | MS.gene08866:CDS |
TCCAAACCACAGAATCATCA+AGG | 0.522957 | 4.2:+13808565 | MS.gene08866:CDS |
TTCAACATCACCAAGCATAC+AGG | 0.525286 | 4.2:-13811312 | None:intergenic |
GGGTTTCAAACCAGAGATGC+AGG | 0.526149 | 4.2:+13813266 | MS.gene08866:CDS |
AAGAAATATCGAGGTTGGAA+AGG | 0.529924 | 4.2:+13812718 | MS.gene08866:CDS |
GCAGCTAGCAGCGGGCATAA+GGG | 0.531238 | 4.2:+13812304 | MS.gene08866:CDS |
ATCACCAAGCATACAGGCCC+AGG | 0.535400 | 4.2:-13811306 | None:intergenic |
CTTGACATAGCATAAAGCTC+TGG | 0.536851 | 4.2:-13812643 | None:intergenic |
TTAAGGCAGTCTCCCCAGAA+TGG | 0.537679 | 4.2:+13810642 | MS.gene08866:CDS |
GCTACTAAAGGATAAGCTAC+AGG | 0.543205 | 4.2:+13811715 | MS.gene08866:CDS |
TCCATCTCACATTCCTGGAA+AGG | 0.544442 | 4.2:+13811379 | MS.gene08866:CDS |
TCTCTCTGGACCAGATAACC+AGG | 0.547626 | 4.2:+13808618 | MS.gene08866:CDS |
TTCATGGAGCCATATTATAG+AGG | 0.548594 | 4.2:+13811637 | MS.gene08866:CDS |
GCAATACTTACATTTCCTGC+TGG | 0.549061 | 4.2:-13810149 | None:intergenic |
AACTGTTAGTAATGTCTCCA+AGG | 0.549109 | 4.2:+13812432 | MS.gene08866:CDS |
GTGCATTACTTCTGGAAACC+GGG | 0.556150 | 4.2:+13811409 | MS.gene08866:CDS |
GATGGATATAATGGAAGGCA+AGG | 0.559300 | 4.2:+13808652 | MS.gene08866:CDS |
TCTTTCCAATGGAGCAGGGT+CGG | 0.560531 | 4.2:-13811486 | None:intergenic |
GGTGCAGTTAAGTTTGAATG+AGG | 0.561643 | 4.2:+13808489 | MS.gene08866:CDS |
ACCTTTCCAGGAATGTGAGA+TGG | 0.568391 | 4.2:-13811380 | None:intergenic |
TACAACGAGCATGAAGCTAC+CGG | 0.569270 | 4.2:+13808538 | MS.gene08866:CDS |
GGTTCCATTAATGAAGAAGA+TGG | 0.570466 | 4.2:-13810292 | None:intergenic |
TTTATGATGGATATAATGGA+AGG | 0.570899 | 4.2:+13808647 | MS.gene08866:CDS |
GATATAAGTGCAAGTAGTGT+TGG | 0.571594 | 4.2:+13812613 | MS.gene08866:CDS |
TCGGGAAGTAGATGAAGAGA+CGG | 0.571607 | 4.2:+13811757 | MS.gene08866:CDS |
ATTCTGTGGTTTGGAATCAC+CGG | 0.571949 | 4.2:-13808557 | None:intergenic |
AGAAAAGGAGTCGGTTTACG+GGG | 0.574601 | 4.2:+13813246 | MS.gene08866:CDS |
CTTCTCTTTCCAATGGAGCA+GGG | 0.575366 | 4.2:-13811490 | None:intergenic |
GAAACAAATGCTGTTATGAG+TGG | 0.575428 | 4.2:+13812586 | MS.gene08866:CDS |
ATCCATCATAAAATAGCCCC+TGG | 0.576549 | 4.2:-13808636 | None:intergenic |
AGTAACCTTAAAGTCAGTTG+AGG | 0.580220 | 4.2:-13808446 | None:intergenic |
ATGTTCACGTGAGTTTCGAA+AGG | 0.582903 | 4.2:-13812671 | None:intergenic |
TGCTGTCAGAAATACAACTC+AGG | 0.587231 | 4.2:+13812504 | MS.gene08866:CDS |
TGTCTCAAGAGTGCTGTCCA+TGG | 0.588545 | 4.2:+13813362 | MS.gene08866:CDS |
CAGCTCATCTGGAGTTCTGG+TGG | 0.594570 | 4.2:-13811513 | None:intergenic |
ACAGGCCCAGGCAGAATCAG+AGG | 0.594590 | 4.2:-13811294 | None:intergenic |
ATATTGCTTTCAGTGAGGAT+CGG | 0.596772 | 4.2:+13812458 | MS.gene08866:CDS |
TTTGTGTAGGCTCATGTGAG+AGG | 0.599137 | 4.2:+13813150 | MS.gene08866:intron |
AAAACGTGCAGCCCAATGAA+GGG | 0.600218 | 4.2:-13811909 | None:intergenic |
TTGAACCCTATTCTCAGTTG+CGG | 0.604424 | 4.2:+13811848 | MS.gene08866:CDS |
GCTTCATGCTCGTTGTAGAA+GGG | 0.605012 | 4.2:-13808532 | None:intergenic |
TCTTTGTCCAAGAAAGAGCA+GGG | 0.605633 | 4.2:+13811785 | MS.gene08866:CDS |
AATGGAACCAGTTACGAACC+CGG | 0.608529 | 4.2:+13810306 | MS.gene08866:CDS |
CCAGTGTAAGAGATGACAGA+TGG | 0.610309 | 4.2:-13812363 | None:intergenic |
TTATTCCTCTGAGACTACAA+AGG | 0.612910 | 4.2:+13810667 | MS.gene08866:CDS |
AGGGATGATGTGCAAGCAAG+AGG | 0.613198 | 4.2:+13808585 | MS.gene08866:CDS |
CAGTCCACCCATTGACATCA+CGG | 0.613503 | 4.2:-13811886 | None:intergenic |
CGGGAAGTAGATGAAGAGAC+GGG | 0.614610 | 4.2:+13811758 | MS.gene08866:CDS |
CCTGTTGAGCTAATTCAGGA+TGG | 0.622578 | 4.2:+13811338 | MS.gene08866:CDS |
CCGAAAACAGAAAGTAGATG+TGG | 0.623324 | 4.2:+13813326 | MS.gene08866:CDS |
GCGGGCATAAGGGACTGGCA+GGG | 0.631483 | 4.2:+13812314 | MS.gene08866:CDS |
GGCAGTTGGAATCTTGGACA+AGG | 0.634216 | 4.2:+13813206 | MS.gene08866:CDS |
ACTGGCAGGGTATCTTTCTG+AGG | 0.634962 | 4.2:+13812327 | MS.gene08866:CDS |
AATGGAATGACTTACTCAGA+AGG | 0.637909 | 4.2:+13808403 | None:intergenic |
CAGGCCCAGGCAGAATCAGA+GGG | 0.639349 | 4.2:-13811293 | None:intergenic |
ATACAACTCAGGCAGCTGCA+CGG | 0.642481 | 4.2:+13812515 | MS.gene08866:CDS |
CTCTCTGGACCAGATAACCA+GGG | 0.644821 | 4.2:+13808619 | MS.gene08866:CDS |
AGAGCAGGGGATTATTCACA+TGG | 0.645001 | 4.2:+13811799 | MS.gene08866:CDS |
CCAAACCACAGAATCATCAA+GGG | 0.649452 | 4.2:+13808566 | MS.gene08866:CDS |
AGCTAAGGTATCTTTGAGTG+AGG | 0.652018 | 4.2:-13812482 | None:intergenic |
TCAATTCAGAAGAAATATCG+AGG | 0.658574 | 4.2:+13812709 | MS.gene08866:CDS |
TGAGAAGTATCGTCAAGCCA+AGG | 0.663944 | 4.2:+13813425 | MS.gene08866:CDS |
ACAAACCTTTGTAGTCTCAG+AGG | 0.664931 | 4.2:-13810672 | None:intergenic |
CTTTGTCCAAGAAAGAGCAG+GGG | 0.667079 | 4.2:+13811786 | MS.gene08866:CDS |
GGAAAATATTGCTTTCAGTG+AGG | 0.667748 | 4.2:+13812453 | MS.gene08866:CDS |
ATTTCCGTGATGTCAATGGG+TGG | 0.671605 | 4.2:+13811882 | MS.gene08866:CDS |
GTGACTTCATCAACACCTTG+AGG | 0.672304 | 4.2:-13810479 | None:intergenic |
TGAGCTATCTAAAAGTTCTG+CGG | 0.677458 | 4.2:+13812393 | MS.gene08866:CDS |
AAGGCAGTCTCCCCAGAATG+GGG | 0.679096 | 4.2:+13810644 | MS.gene08866:CDS |
ATCTGGTCCAGAGAGAGCTG+TGG | 0.680189 | 4.2:-13808611 | None:intergenic |
AGATGGCGGAGAAAAGGAGT+CGG | 0.685188 | 4.2:+13813237 | MS.gene08866:CDS |
AGAGGAATAACCCCATTCTG+GGG | 0.688939 | 4.2:-13810654 | None:intergenic |
ACAAGGTTGTGCTAAGATGG+CGG | 0.689666 | 4.2:+13813223 | MS.gene08866:CDS |
AGCATCAGGAGATTTGACCA+TGG | 0.713604 | 4.2:-13813379 | None:intergenic |
TCATCCATAGAAGAATATGG+AGG | 0.715779 | 4.2:-13810506 | None:intergenic |
TCTCTGGACCAGATAACCAG+GGG | 0.716297 | 4.2:+13808620 | MS.gene08866:CDS |
TAAAGGATAAGCTACAGGCG+TGG | 0.717250 | 4.2:+13811720 | MS.gene08866:CDS |
AGATCCAATTGGTAAAACTG+CGG | 0.717630 | 4.2:+13812273 | MS.gene08866:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTATAAATAAGAGTTTAAT+TGG | + | chr4.2:13810905-13810924 | MS.gene08866:intron | 10.0% |
!!! | AATATCAAGAATATTTTAAA+AGG | - | chr4.2:13812153-13812172 | None:intergenic | 10.0% |
!!! | AGTTTATTTATTTATTTTTG+GGG | + | chr4.2:13811966-13811985 | MS.gene08866:intron | 10.0% |
!!! | ATATCAAGAATATTTTAAAA+GGG | - | chr4.2:13812152-13812171 | None:intergenic | 10.0% |
!! | AAAAAACTGTTAAATTGATA+AGG | - | chr4.2:13810393-13810412 | None:intergenic | 15.0% |
!! | AAAACAGAAATTTACTATTA+AGG | + | chr4.2:13810625-13810644 | MS.gene08866:CDS | 15.0% |
!! | AAATCTATATAAAATTGGTT+TGG | + | chr4.2:13810851-13810870 | MS.gene08866:intron | 15.0% |
!! | AATTAAATCCATAAATAATC+AGG | + | chr4.2:13811090-13811109 | MS.gene08866:intron | 15.0% |
!! | ATTAAACAAGAAAAATACTA+AGG | + | chr4.2:13809403-13809422 | MS.gene08866:intron | 15.0% |
!! | GTTGGAAAAAATAATAAAAA+AGG | + | chr4.2:13808999-13809018 | MS.gene08866:intron | 15.0% |
!! | TTTCTTATCTTAAAATGATT+TGG | + | chr4.2:13811187-13811206 | MS.gene08866:intron | 15.0% |
!!! | ATCAATTTAACAGTTTTTTT+TGG | + | chr4.2:13810394-13810413 | MS.gene08866:intron | 15.0% |
!!! | GAAATCTTTTGATTATATTT+TGG | + | chr4.2:13813474-13813493 | MS.gene08866:intron | 15.0% |
!!! | TATTTCTAATTTATTTGTGT+AGG | + | chr4.2:13813137-13813156 | MS.gene08866:intron | 15.0% |
!!! | TTTTGTTACAATGTATAAAT+TGG | + | chr4.2:13813677-13813696 | MS.gene08866:intron | 15.0% |
!! | AAGATTTACATGTAAAAAAG+TGG | + | chr4.2:13809092-13809111 | MS.gene08866:intron | 20.0% |
!! | AGTGGAAATCTATATAAAAT+TGG | + | chr4.2:13810846-13810865 | MS.gene08866:intron | 20.0% |
!! | GCAAATAAGAAGATTTATTA+TGG | - | chr4.2:13808897-13808916 | None:intergenic | 20.0% |
!! | GTCAATTTAGGAATTTAATA+CGG | + | chr4.2:13810995-13811014 | MS.gene08866:intron | 20.0% |
!! | TAAAAGACACTTTCATAATT+TGG | + | chr4.2:13812121-13812140 | MS.gene08866:intron | 20.0% |
!! | TAAAATTTGATACTTAAAGC+AGG | + | chr4.2:13810261-13810280 | MS.gene08866:intron | 20.0% |
!! | TCAAATTATGAAAGAAGATA+TGG | - | chr4.2:13809925-13809944 | None:intergenic | 20.0% |
!!! | AAGAATATTTTAAAAGGGAT+CGG | - | chr4.2:13812147-13812166 | None:intergenic | 20.0% |
!!! | AAGTGTCTTTTAAATAATTC+AGG | - | chr4.2:13812113-13812132 | None:intergenic | 20.0% |
!!! | ACTCTTATTTATAAATAGCA+TGG | - | chr4.2:13810900-13810919 | None:intergenic | 20.0% |
!!! | ATTTTATATAGATTTCCACT+AGG | - | chr4.2:13810846-13810865 | None:intergenic | 20.0% |
!!! | CTATTTTATGATGGATATAA+TGG | + | chr4.2:13808643-13808662 | MS.gene08866:CDS | 20.0% |
!!! | CTCTTATTTATAAATAGCAT+GGG | - | chr4.2:13810899-13810918 | None:intergenic | 20.0% |
!!! | TATAGATTGTAAAGATTTTC+AGG | - | chr4.2:13810818-13810837 | None:intergenic | 20.0% |
!!! | TGTTATTACTTGTTAGATTT+GGG | + | chr4.2:13811534-13811553 | MS.gene08866:CDS | 20.0% |
!!! | TTTTCAGTAAACAAAAATGT+TGG | + | chr4.2:13812034-13812053 | MS.gene08866:intron | 20.0% |
! | AAAACATTTGATTATGTGAG+TGG | - | chr4.2:13813562-13813581 | None:intergenic | 25.0% |
! | AAAACTCAATTTGAGAGAAA+AGG | + | chr4.2:13809290-13809309 | MS.gene08866:intron | 25.0% |
! | AAATGGTTTATAGATCTTCA+TGG | - | chr4.2:13813632-13813651 | None:intergenic | 25.0% |
! | AAGTAATGATAACAACGAAT+CGG | + | chr4.2:13811583-13811602 | MS.gene08866:CDS | 25.0% |
! | AATCAAATGCTAAAGAAAAG+AGG | - | chr4.2:13813509-13813528 | None:intergenic | 25.0% |
! | AATCCATAAATAATCAGGTT+AGG | + | chr4.2:13811095-13811114 | MS.gene08866:intron | 25.0% |
! | ACAAACAAGTGAAGAAAAAT+CGG | + | chr4.2:13813725-13813744 | MS.gene08866:CDS | 25.0% |
! | ACATTTAAGCTTAACTAGTT+TGG | + | chr4.2:13811146-13811165 | MS.gene08866:intron | 25.0% |
! | AGAAATTAAGAGGATCTATA+AGG | + | chr4.2:13812918-13812937 | MS.gene08866:intron | 25.0% |
! | AGATCTGAATAAACGTAAAT+TGG | - | chr4.2:13810207-13810226 | None:intergenic | 25.0% |
! | ATGAAGAGAGAAACAATTAT+AGG | + | chr4.2:13813066-13813085 | MS.gene08866:intron | 25.0% |
! | ATGACAATGTAAAGTCAAAA+TGG | - | chr4.2:13813649-13813668 | None:intergenic | 25.0% |
! | ATTTACTCAGTGAAATATCT+GGG | + | chr4.2:13808719-13808738 | MS.gene08866:intron | 25.0% |
! | ATTTGTGAACAGAAATTAAG+AGG | + | chr4.2:13812908-13812927 | MS.gene08866:intron | 25.0% |
! | CAAGAAAAATACTAAGGTTA+AGG | + | chr4.2:13809409-13809428 | MS.gene08866:intron | 25.0% |
! | CACTAATAAGGCTTAAAAAA+TGG | + | chr4.2:13809627-13809646 | MS.gene08866:intron | 25.0% |
! | CTTTCATACATTATGTAACA+AGG | - | chr4.2:13809147-13809166 | None:intergenic | 25.0% |
! | GATCACATTCATTTAGAAAA+CGG | + | chr4.2:13812554-13812573 | MS.gene08866:CDS | 25.0% |
! | GCTTTACATTGATATTGTAT+AGG | + | chr4.2:13809715-13809734 | MS.gene08866:intron | 25.0% |
! | TAAAAGAAAGTCGTCTATAA+GGG | - | chr4.2:13808763-13808782 | None:intergenic | 25.0% |
! | TACAAAAAAAGCCACTAATA+AGG | + | chr4.2:13809615-13809634 | MS.gene08866:intron | 25.0% |
! | TATCCTAACCTGATTATTTA+TGG | - | chr4.2:13811101-13811120 | None:intergenic | 25.0% |
! | TGAAAAATGCTAGTATAGTT+AGG | - | chr4.2:13813037-13813056 | None:intergenic | 25.0% |
! | TTTAATTAGAGTCCTAATTC+AGG | - | chr4.2:13809389-13809408 | None:intergenic | 25.0% |
!! | AGATTATTTTCCCTATTTCA+TGG | + | chr4.2:13809165-13809184 | MS.gene08866:intron | 25.0% |
!! | CATCATCAATTTTTATAGGA+TGG | - | chr4.2:13813537-13813556 | None:intergenic | 25.0% |
!! | CTGTTATTACTTGTTAGATT+TGG | + | chr4.2:13811533-13811552 | MS.gene08866:CDS | 25.0% |
!! | GAAGCATTACAAAGTATTAT+GGG | + | chr4.2:13813185-13813204 | MS.gene08866:CDS | 25.0% |
!! | GATGTTGATATTTTCATTCA+AGG | + | chr4.2:13811992-13812011 | MS.gene08866:intron | 25.0% |
!! | TCTCATCATTTCAATTTTTC+AGG | - | chr4.2:13812817-13812836 | None:intergenic | 25.0% |
!! | TTATGAAATTGTTGTGGTTT+TGG | + | chr4.2:13809848-13809867 | MS.gene08866:intron | 25.0% |
!! | TTTGATAATAATGCAGTTGA+AGG | - | chr4.2:13813107-13813126 | None:intergenic | 25.0% |
!!! | AAGGCTTAAAAAATGGATTT+TGG | + | chr4.2:13809634-13809653 | MS.gene08866:intron | 25.0% |
!!! | AGGCTTAAAAAATGGATTTT+GGG | + | chr4.2:13809635-13809654 | MS.gene08866:intron | 25.0% |
!!! | CAGTTTTTTTTGGCTTATTT+TGG | + | chr4.2:13810404-13810423 | MS.gene08866:intron | 25.0% |
!!! | CATTTTTTAAGCCTTATTAG+TGG | - | chr4.2:13809629-13809648 | None:intergenic | 25.0% |
!!! | GATGTTTAATTTTAACGAAG+AGG | - | chr4.2:13809988-13810007 | None:intergenic | 25.0% |
!!! | TGAAAAAACTAACTAGCTTT+AGG | - | chr4.2:13809891-13809910 | None:intergenic | 25.0% |
!!! | TTTATGATGGATATAATGGA+AGG | + | chr4.2:13808647-13808666 | MS.gene08866:CDS | 25.0% |
AAAAGTGGAACAGTCTTTAA+AGG | + | chr4.2:13809107-13809126 | MS.gene08866:intron | 30.0% | |
AAAGAAGATATGGTTTACAG+TGG | - | chr4.2:13809915-13809934 | None:intergenic | 30.0% | |
AAAGTGGTGTATATTCTTGT+AGG | + | chr4.2:13810038-13810057 | MS.gene08866:intron | 30.0% | |
AACAACCAGCATATAACAAT+TGG | - | chr4.2:13808960-13808979 | None:intergenic | 30.0% | |
AACAGTGTTACATGGTTATA+GGG | + | chr4.2:13809343-13809362 | MS.gene08866:intron | 30.0% | |
ACAACCAGCATATAACAATT+GGG | - | chr4.2:13808959-13808978 | None:intergenic | 30.0% | |
ACAATCTATATATGACCTAG+TGG | + | chr4.2:13810828-13810847 | MS.gene08866:intron | 30.0% | |
AGTAATGATAACAACGAATC+GGG | + | chr4.2:13811584-13811603 | MS.gene08866:CDS | 30.0% | |
AGTAGATGTGGAAATTGAAA+AGG | + | chr4.2:13813338-13813357 | MS.gene08866:CDS | 30.0% | |
AGTATTCTGTAATTGTCGAT+TGG | + | chr4.2:13808825-13808844 | MS.gene08866:intron | 30.0% | |
ATAAATTTCCGTGATGTCAA+TGG | + | chr4.2:13811878-13811897 | MS.gene08866:CDS | 30.0% | |
ATAGTAGAGCCTCTATAATA+TGG | - | chr4.2:13811649-13811668 | None:intergenic | 30.0% | |
ATGGATTTCAGGCTTAAAAA+AGG | + | chr4.2:13809482-13809501 | MS.gene08866:intron | 30.0% | |
ATGTAACAAGGAATTTCCTA+TGG | - | chr4.2:13809135-13809154 | None:intergenic | 30.0% | |
ATTATAGAGGCTCTACTATT+TGG | + | chr4.2:13811650-13811669 | MS.gene08866:CDS | 30.0% | |
ATTCTTCTGGTACTATCAAT+TGG | + | chr4.2:13811681-13811700 | MS.gene08866:CDS | 30.0% | |
CAATTTCATAAGCAAACCTT+TGG | - | chr4.2:13809839-13809858 | None:intergenic | 30.0% | |
CATTTACTCAGTGAAATATC+TGG | + | chr4.2:13808718-13808737 | MS.gene08866:intron | 30.0% | |
GAGACTATAAATGCTAAAAG+TGG | + | chr4.2:13810022-13810041 | MS.gene08866:intron | 30.0% | |
GATATTTGAGGAGTCAATTT+AGG | + | chr4.2:13810983-13811002 | MS.gene08866:intron | 30.0% | |
GTAAAAGAAAGTCGTCTATA+AGG | - | chr4.2:13808764-13808783 | None:intergenic | 30.0% | |
GTTTCATCCATAGAAGAATA+TGG | - | chr4.2:13810512-13810531 | None:intergenic | 30.0% | |
GTTTGCTTATGAAATTGTTG+TGG | + | chr4.2:13809842-13809861 | MS.gene08866:intron | 30.0% | |
TAAATTTCCGTGATGTCAAT+GGG | + | chr4.2:13811879-13811898 | MS.gene08866:CDS | 30.0% | |
TACTTGTCAACCATGAAATA+GGG | - | chr4.2:13809178-13809197 | None:intergenic | 30.0% | |
TATATTCTTGTAGGTGATAG+TGG | + | chr4.2:13810047-13810066 | MS.gene08866:intron | 30.0% | |
TATTCCATACAGGGAAAAAA+TGG | + | chr4.2:13812192-13812211 | MS.gene08866:intron | 30.0% | |
TCAATTCAGAAGAAATATCG+AGG | + | chr4.2:13812709-13812728 | MS.gene08866:CDS | 30.0% | |
TGTGTGAATAAAAGGAATGT+TGG | + | chr4.2:13808981-13809000 | MS.gene08866:intron | 30.0% | |
TTACTTGTCAACCATGAAAT+AGG | - | chr4.2:13809179-13809198 | None:intergenic | 30.0% | |
TTCACCATCTTCTTCATTAA+TGG | + | chr4.2:13810288-13810307 | MS.gene08866:CDS | 30.0% | |
TTGAAATGATGAGAGCTATA+TGG | + | chr4.2:13812823-13812842 | MS.gene08866:intron | 30.0% | |
TTGTCTTGAAACATTTCATG+TGG | + | chr4.2:13809210-13809229 | MS.gene08866:intron | 30.0% | |
! | AATTTCAACACTGATAATGC+TGG | + | chr4.2:13810346-13810365 | MS.gene08866:CDS | 30.0% |
! | ACTGAAAGCAATATTTTCCT+TGG | - | chr4.2:13812452-13812471 | None:intergenic | 30.0% |
! | ATGCACAGGTTTTCATTATT+GGG | + | chr4.2:13811255-13811274 | MS.gene08866:intron | 30.0% |
! | GGCACATCATCAATTTTTAT+AGG | - | chr4.2:13813541-13813560 | None:intergenic | 30.0% |
! | GGGAATTTTCATAAAACAGA+AGG | + | chr4.2:13811604-13811623 | MS.gene08866:CDS | 30.0% |
! | TATGCACAGGTTTTCATTAT+TGG | + | chr4.2:13811254-13811273 | MS.gene08866:intron | 30.0% |
! | TATTTTCCTCGTTTAATCAG+AGG | - | chr4.2:13809597-13809616 | None:intergenic | 30.0% |
!! | AACTAGCTTTAGGAGAAAAT+TGG | - | chr4.2:13809881-13809900 | None:intergenic | 30.0% |
!! | AAGTGTTTGTTATTCCATAC+AGG | + | chr4.2:13812182-13812201 | MS.gene08866:intron | 30.0% |
!! | AGTGTTTGTTATTCCATACA+GGG | + | chr4.2:13812183-13812202 | MS.gene08866:intron | 30.0% |
!! | GGAAGCATTACAAAGTATTA+TGG | + | chr4.2:13813184-13813203 | MS.gene08866:CDS | 30.0% |
!! | GGTTGTTTTGTGTGAATAAA+AGG | + | chr4.2:13808973-13808992 | MS.gene08866:intron | 30.0% |
AAAAATGTATACATGCCAGC+AGG | + | chr4.2:13810134-13810153 | MS.gene08866:CDS | 35.0% | |
AACTGTTAGTAATGTCTCCA+AGG | + | chr4.2:13812432-13812451 | MS.gene08866:CDS | 35.0% | |
AAGAAATATCGAGGTTGGAA+AGG | + | chr4.2:13812718-13812737 | MS.gene08866:CDS | 35.0% | |
ACAAGTAATAACAGCTCATC+TGG | - | chr4.2:13811527-13811546 | None:intergenic | 35.0% | |
ACTTCCTCCATATTCTTCTA+TGG | + | chr4.2:13810502-13810521 | MS.gene08866:CDS | 35.0% | |
AGATCCAATTGGTAAAACTG+CGG | + | chr4.2:13812273-13812292 | MS.gene08866:CDS | 35.0% | |
AGTAACCTTAAAGTCAGTTG+AGG | - | chr4.2:13808449-13808468 | None:intergenic | 35.0% | |
AGTAGTGAAGATACAGGTAA+TGG | + | chr4.2:13812771-13812790 | MS.gene08866:intron | 35.0% | |
ATATTGCTTTCAGTGAGGAT+CGG | + | chr4.2:13812458-13812477 | MS.gene08866:CDS | 35.0% | |
ATTACAGAATACTATCCGTG+CGG | - | chr4.2:13808818-13808837 | None:intergenic | 35.0% | |
ATTCCCCAATTGTTATATGC+TGG | + | chr4.2:13808952-13808971 | MS.gene08866:intron | 35.0% | |
CAACAGGAGTTTACATGATT+GGG | - | chr4.2:13809672-13809691 | None:intergenic | 35.0% | |
CAACCAGCATATAACAATTG+GGG | - | chr4.2:13808958-13808977 | None:intergenic | 35.0% | |
CAGTCAGAAATCATAGTGTA+AGG | - | chr4.2:13810724-13810743 | None:intergenic | 35.0% | |
CATATAACAATTGGGGAATC+AGG | - | chr4.2:13808951-13808970 | None:intergenic | 35.0% | |
CCAAAAAGTAGTGAAGATAC+AGG | + | chr4.2:13812765-13812784 | MS.gene08866:CDS | 35.0% | |
CTTACACTATGATTTCTGAC+TGG | + | chr4.2:13810722-13810741 | MS.gene08866:intron | 35.0% | |
CTTTGTAATGCTTCCTAACT+TGG | - | chr4.2:13813179-13813198 | None:intergenic | 35.0% | |
GAAACAAATGCTGTTATGAG+TGG | + | chr4.2:13812586-13812605 | MS.gene08866:CDS | 35.0% | |
GAAATGAAAAGGCTCTATCA+TGG | + | chr4.2:13810111-13810130 | MS.gene08866:CDS | 35.0% | |
GAACAGTGTTACATGGTTAT+AGG | + | chr4.2:13809342-13809361 | MS.gene08866:intron | 35.0% | |
GATATAAGTGCAAGTAGTGT+TGG | + | chr4.2:13812613-13812632 | MS.gene08866:CDS | 35.0% | |
GGAAAATATTGCTTTCAGTG+AGG | + | chr4.2:13812453-13812472 | MS.gene08866:CDS | 35.0% | |
GGTTCCATTAATGAAGAAGA+TGG | - | chr4.2:13810295-13810314 | None:intergenic | 35.0% | |
TAAACATCAACTGCTAAGAG+AGG | + | chr4.2:13810000-13810019 | MS.gene08866:intron | 35.0% | |
TATCATGAGATGCTCCAATT+TGG | - | chr4.2:13810580-13810599 | None:intergenic | 35.0% | |
TCACAGTATAAAATGCCCTA+TGG | - | chr4.2:13813596-13813615 | None:intergenic | 35.0% | |
TCATCCATAGAAGAATATGG+AGG | - | chr4.2:13810509-13810528 | None:intergenic | 35.0% | |
TGACTCCTCAAATATCTATG+CGG | - | chr4.2:13810979-13810998 | None:intergenic | 35.0% | |
TGGGCTTAAGTGAAGTTATA+CGG | - | chr4.2:13809741-13809760 | None:intergenic | 35.0% | |
TTAAGCCCATTCAACATCAT+TGG | + | chr4.2:13809752-13809771 | MS.gene08866:intron | 35.0% | |
TTCACTTGTTTGTGCAAGTT+CGG | - | chr4.2:13813718-13813737 | None:intergenic | 35.0% | |
TTCAGAAGAAATATCGAGGT+TGG | + | chr4.2:13812713-13812732 | MS.gene08866:CDS | 35.0% | |
TTCATGGAGCCATATTATAG+AGG | + | chr4.2:13811637-13811656 | MS.gene08866:CDS | 35.0% | |
TTGCAAAGAACAGTGTTACA+TGG | + | chr4.2:13809335-13809354 | MS.gene08866:intron | 35.0% | |
TTGTTTGACCAAAGCCAAAT+TGG | + | chr4.2:13810563-13810582 | MS.gene08866:CDS | 35.0% | |
TTTCACCGCATAGATATTTG+AGG | + | chr4.2:13810971-13810990 | MS.gene08866:intron | 35.0% | |
TTTCCCTGATGGAAATGAAA+AGG | + | chr4.2:13810100-13810119 | MS.gene08866:CDS | 35.0% | |
TTTGGCAGTGAAAATTCTTC+TGG | + | chr4.2:13811668-13811687 | MS.gene08866:CDS | 35.0% | |
! | ACAAAGGTTTGTTCCTTTCT+AGG | + | chr4.2:13810683-13810702 | MS.gene08866:intron | 35.0% |
! | ACAGTCTTTAAAGGTTCCAT+AGG | + | chr4.2:13809116-13809135 | MS.gene08866:intron | 35.0% |
! | AGAAACCTCAACTGACTTTA+AGG | + | chr4.2:13808441-13808460 | MS.gene08866:CDS | 35.0% |
! | ATGCTTAAGCAATGGATTTC+AGG | + | chr4.2:13809471-13809490 | MS.gene08866:intron | 35.0% |
! | CAAGAGAATTTTACCACAGA+AGG | - | chr4.2:13808922-13808941 | None:intergenic | 35.0% |
! | CCACATCTACTTTCTGTTTT+CGG | - | chr4.2:13813329-13813348 | None:intergenic | 35.0% |
! | CTAGTCTTCATATGACTCAT+CGG | - | chr4.2:13809236-13809255 | None:intergenic | 35.0% |
! | GCATTTTATACTGTGAGAGT+CGG | + | chr4.2:13813600-13813619 | MS.gene08866:CDS | 35.0% |
! | TAAATTGGCAACTCTTTTGC+AGG | + | chr4.2:13813692-13813711 | MS.gene08866:intron | 35.0% |
! | TACAAAGTATTATGGGCAGT+TGG | + | chr4.2:13813192-13813211 | MS.gene08866:CDS | 35.0% |
! | TTTGTCCAGCTATAGTTTTC+CGG | - | chr4.2:13810328-13810347 | None:intergenic | 35.0% |
! | TTTTGCATGATGCTTCCATA+GGG | + | chr4.2:13813578-13813597 | MS.gene08866:intron | 35.0% |
!! | CCTGTATCTTCACTACTTTT+TGG | - | chr4.2:13812768-13812787 | None:intergenic | 35.0% |
!! | GTAAAGATTTTCAGGAACCT+AGG | - | chr4.2:13810810-13810829 | None:intergenic | 35.0% |
!! | TTATTCCTCTGAGACTACAA+AGG | + | chr4.2:13810667-13810686 | MS.gene08866:CDS | 35.0% |
AAAACAGCTGGTAACATGTG+AGG | - | chr4.2:13810452-13810471 | None:intergenic | 40.0% | |
AACTTAACTGCACCTCCAAT+CGG | - | chr4.2:13808483-13808502 | None:intergenic | 40.0% | |
AAGTGAAATTTAGCGCTGTC+CGG | + | chr4.2:13809950-13809969 | MS.gene08866:intron | 40.0% | |
AATAATCCCCTGCTCTTTCT+TGG | - | chr4.2:13811795-13811814 | None:intergenic | 40.0% | |
ACAAACCTTTGTAGTCTCAG+AGG | - | chr4.2:13810675-13810694 | None:intergenic | 40.0% | |
ACACTATGATTTCTGACTGG+TGG | + | chr4.2:13810725-13810744 | MS.gene08866:intron | 40.0% | |
AGTGTTACATGGTTATAGGG+TGG | + | chr4.2:13809346-13809365 | MS.gene08866:intron | 40.0% | |
AGTTCCTGTTGAGCTAATTC+AGG | + | chr4.2:13811334-13811353 | MS.gene08866:CDS | 40.0% | |
ATCCATCATAAAATAGCCCC+TGG | - | chr4.2:13808639-13808658 | None:intergenic | 40.0% | |
ATGTGAGAGGTTACCAAGTT+AGG | + | chr4.2:13813163-13813182 | MS.gene08866:CDS | 40.0% | |
ATGTTCACGTGAGTTTCGAA+AGG | - | chr4.2:13812674-13812693 | None:intergenic | 40.0% | |
ATTATGGGCAGTTGGAATCT+TGG | + | chr4.2:13813200-13813219 | MS.gene08866:CDS | 40.0% | |
CATTTCCATCAGGGAAATCA+TGG | - | chr4.2:13810097-13810116 | None:intergenic | 40.0% | |
CCAAACCACAGAATCATCAA+GGG | + | chr4.2:13808566-13808585 | MS.gene08866:CDS | 40.0% | |
CCGAAAACAGAAAGTAGATG+TGG | + | chr4.2:13813326-13813345 | MS.gene08866:CDS | 40.0% | |
CGATGAGTCATATGAAGACT+AGG | + | chr4.2:13809234-13809253 | MS.gene08866:intron | 40.0% | |
CTTGACATAGCATAAAGCTC+TGG | - | chr4.2:13812646-13812665 | None:intergenic | 40.0% | |
CTTGATACGATCATCAGTCT+TGG | - | chr4.2:13812075-13812094 | None:intergenic | 40.0% | |
CTTTGACGACTAACTTACCT+TGG | - | chr4.2:13813445-13813464 | None:intergenic | 40.0% | |
GAAGAGGAGAAAACAAGATC+CGG | - | chr4.2:13809972-13809991 | None:intergenic | 40.0% | |
GATATGTTGCTCATGCTTTG+TGG | + | chr4.2:13811117-13811136 | MS.gene08866:intron | 40.0% | |
GCAACAGGAGTTTACATGAT+TGG | - | chr4.2:13809673-13809692 | None:intergenic | 40.0% | |
GCAATACTTACATTTCCTGC+TGG | - | chr4.2:13810152-13810171 | None:intergenic | 40.0% | |
GCAGTCCAATGATGTTGAAT+GGG | - | chr4.2:13809760-13809779 | None:intergenic | 40.0% | |
GCTACTAAAGGATAAGCTAC+AGG | + | chr4.2:13811715-13811734 | MS.gene08866:CDS | 40.0% | |
GCTTCTTGAAGAGCTACTAA+AGG | + | chr4.2:13811703-13811722 | MS.gene08866:CDS | 40.0% | |
GGATTATTCACATGGTTGCT+GGG | + | chr4.2:13811807-13811826 | MS.gene08866:CDS | 40.0% | |
GGTGCAGTTAAGTTTGAATG+AGG | + | chr4.2:13808489-13808508 | MS.gene08866:CDS | 40.0% | |
GTTACTCTGTGCATTACTTC+TGG | + | chr4.2:13811401-13811420 | MS.gene08866:CDS | 40.0% | |
GTTGCATCACTTATAGCTTC+TGG | + | chr4.2:13812214-13812233 | MS.gene08866:CDS | 40.0% | |
TAAAATAGCCCCTGGTTATC+TGG | - | chr4.2:13808631-13808650 | None:intergenic | 40.0% | |
TCCAAACCACAGAATCATCA+AGG | + | chr4.2:13808565-13808584 | MS.gene08866:CDS | 40.0% | |
TCTTTGTCCAAGAAAGAGCA+GGG | + | chr4.2:13811785-13811804 | MS.gene08866:CDS | 40.0% | |
TGAAAAGCTCCTTTCAATCC+TGG | - | chr4.2:13809539-13809558 | None:intergenic | 40.0% | |
TGCAGTCCAATGATGTTGAA+TGG | - | chr4.2:13809761-13809780 | None:intergenic | 40.0% | |
TGCTGTCAGAAATACAACTC+AGG | + | chr4.2:13812504-13812523 | MS.gene08866:CDS | 40.0% | |
TTACAGAATACTATCCGTGC+GGG | - | chr4.2:13808817-13808836 | None:intergenic | 40.0% | |
TTAGGACCTCTGATTAAACG+AGG | + | chr4.2:13809588-13809607 | MS.gene08866:intron | 40.0% | |
TTCAACATCACCAAGCATAC+AGG | - | chr4.2:13811315-13811334 | None:intergenic | 40.0% | |
TTCTTTGTCCAAGAAAGAGC+AGG | + | chr4.2:13811784-13811803 | MS.gene08866:CDS | 40.0% | |
TTGAACCCTATTCTCAGTTG+CGG | + | chr4.2:13811848-13811867 | MS.gene08866:CDS | 40.0% | |
TTTGTGCCTATGAGTTACCT+AGG | + | chr4.2:13810790-13810809 | MS.gene08866:intron | 40.0% | |
! | AGAAGGCTGATGATGATTCA+TGG | + | chr4.2:13811621-13811640 | MS.gene08866:CDS | 40.0% |
! | AGAGCCTTTTCATTTCCATC+AGG | - | chr4.2:13810107-13810126 | None:intergenic | 40.0% |
! | AGCTAAGGTATCTTTGAGTG+AGG | - | chr4.2:13812485-13812504 | None:intergenic | 40.0% |
! | ATCATCCCTTGATGATTCTG+TGG | - | chr4.2:13808574-13808593 | None:intergenic | 40.0% |
! | ATTCTGTGGTTTGGAATCAC+CGG | - | chr4.2:13808560-13808579 | None:intergenic | 40.0% |
! | ATTGGAGCATCTCATGATAC+TGG | + | chr4.2:13810581-13810600 | MS.gene08866:CDS | 40.0% |
! | GAGCCTTTTCATTTCCATCA+GGG | - | chr4.2:13810106-13810125 | None:intergenic | 40.0% |
! | GATGGATATAATGGAAGGCA+AGG | + | chr4.2:13808652-13808671 | MS.gene08866:CDS | 40.0% |
! | GTTTTGCATGATGCTTCCAT+AGG | + | chr4.2:13813577-13813596 | MS.gene08866:intron | 40.0% |
! | TGTATTTCTGACAGCAGCTA+AGG | - | chr4.2:13812500-13812519 | None:intergenic | 40.0% |
! | TGTGCATTACTTCTGGAAAC+CGG | + | chr4.2:13811408-13811427 | MS.gene08866:CDS | 40.0% |
! | TTCTTATTTGCTGCCTTCTG+TGG | + | chr4.2:13808906-13808925 | MS.gene08866:intron | 40.0% |
! | TTGTCCAGCTATAGTTTTCC+GGG | - | chr4.2:13810327-13810346 | None:intergenic | 40.0% |
! | TTTTCGTTAACCTGCATCTC+TGG | - | chr4.2:13813279-13813298 | None:intergenic | 40.0% |
!! | AACCAGGGGCTATTTTATGA+TGG | + | chr4.2:13808634-13808653 | MS.gene08866:CDS | 40.0% |
!! | CGAGCTTTAGGAATCAAATC+AGG | - | chr4.2:13811228-13811247 | None:intergenic | 40.0% |
!!! | CTACTTTTTGGCGCAATGAT+AGG | - | chr4.2:13812756-13812775 | None:intergenic | 40.0% |
!!! | GCAACCATTTTTTCCCTGTA+TGG | - | chr4.2:13812199-13812218 | None:intergenic | 40.0% |
AAAACGTGCAGCCCAATGAA+GGG | - | chr4.2:13811912-13811931 | None:intergenic | 45.0% | |
AATGGAACCAGTTACGAACC+CGG | + | chr4.2:13810306-13810325 | MS.gene08866:CDS | 45.0% | |
ACAAGGTTGTGCTAAGATGG+CGG | + | chr4.2:13813223-13813242 | MS.gene08866:CDS | 45.0% | |
ACCTTTCCAGGAATGTGAGA+TGG | - | chr4.2:13811383-13811402 | None:intergenic | 45.0% | |
AGAGCAGGGGATTATTCACA+TGG | + | chr4.2:13811799-13811818 | MS.gene08866:CDS | 45.0% | |
AGAGGAATAACCCCATTCTG+GGG | - | chr4.2:13810657-13810676 | None:intergenic | 45.0% | |
AGAGGTCCTAAGCAGAGTTA+CGG | - | chr4.2:13809579-13809598 | None:intergenic | 45.0% | |
AGCATCAGGAGATTTGACCA+TGG | - | chr4.2:13813382-13813401 | None:intergenic | 45.0% | |
AGCTTCATGCTCGTTGTAGA+AGG | - | chr4.2:13808536-13808555 | None:intergenic | 45.0% | |
ATGCACAGAGTAACCTTTCC+AGG | - | chr4.2:13811395-13811414 | None:intergenic | 45.0% | |
ATTCACATGGTTGCTGGGTT+GGG | + | chr4.2:13811812-13811831 | MS.gene08866:CDS | 45.0% | |
ATTTCCGTGATGTCAATGGG+TGG | + | chr4.2:13811882-13811901 | MS.gene08866:CDS | 45.0% | |
CAAACCTTTGGCAACTAGTG+TGG | - | chr4.2:13809827-13809846 | None:intergenic | 45.0% | |
CACGACTCATGCTTAAGCAA+TGG | + | chr4.2:13809463-13809482 | MS.gene08866:intron | 45.0% | |
CAGAGGAATAACCCCATTCT+GGG | - | chr4.2:13810658-13810677 | None:intergenic | 45.0% | |
CAGGAACCTAGGTAACTCAT+AGG | - | chr4.2:13810799-13810818 | None:intergenic | 45.0% | |
CATGGTTATAGGGTGGTAAG+TGG | + | chr4.2:13809353-13809372 | MS.gene08866:intron | 45.0% | |
CATTGCTTAAGCATGAGTCG+TGG | - | chr4.2:13809465-13809484 | None:intergenic | 45.0% | |
CCAAGTGCACAAGATCCAAT+TGG | + | chr4.2:13812262-13812281 | MS.gene08866:CDS | 45.0% | |
CCAATTGGATCTTGTGCACT+TGG | - | chr4.2:13812265-13812284 | None:intergenic | 45.0% | |
CCAGTGTAAGAGATGACAGA+TGG | - | chr4.2:13812366-13812385 | None:intergenic | 45.0% | |
CCATCCTGAATTAGCTCAAC+AGG | - | chr4.2:13811341-13811360 | None:intergenic | 45.0% | |
CCATCTGTCATCTCTTACAC+TGG | + | chr4.2:13812363-13812382 | MS.gene08866:CDS | 45.0% | |
CCTGTTGAGCTAATTCAGGA+TGG | + | chr4.2:13811338-13811357 | MS.gene08866:CDS | 45.0% | |
CTAGACCATGATTTCCCTGA+TGG | + | chr4.2:13810089-13810108 | MS.gene08866:CDS | 45.0% | |
CTTCTCTTTCCAATGGAGCA+GGG | - | chr4.2:13811493-13811512 | None:intergenic | 45.0% | |
CTTTGTCCAAGAAAGAGCAG+GGG | + | chr4.2:13811786-13811805 | MS.gene08866:CDS | 45.0% | |
GAAACCACTCTCTCACAACT+AGG | + | chr4.2:13809025-13809044 | MS.gene08866:intron | 45.0% | |
GAAGTTCCATCTCACATTCC+TGG | + | chr4.2:13811374-13811393 | MS.gene08866:CDS | 45.0% | |
GCAACTGAGAATAGGGTTCA+AGG | - | chr4.2:13811849-13811868 | None:intergenic | 45.0% | |
GCTTCATGCTCGTTGTAGAA+GGG | - | chr4.2:13808535-13808554 | None:intergenic | 45.0% | |
GGGATTATTCACATGGTTGC+TGG | + | chr4.2:13811806-13811825 | MS.gene08866:CDS | 45.0% | |
GGTGACATCTGACCTGAATT+AGG | + | chr4.2:13809374-13809393 | MS.gene08866:intron | 45.0% | |
GTAACCTAGTTGTGAGAGAG+TGG | - | chr4.2:13809032-13809051 | None:intergenic | 45.0% | |
GTGACATTGCCAGGATTGAA+AGG | + | chr4.2:13809527-13809546 | MS.gene08866:intron | 45.0% | |
GTGACTTCATCAACACCTTG+AGG | - | chr4.2:13810482-13810501 | None:intergenic | 45.0% | |
TAAAGGATAAGCTACAGGCG+TGG | + | chr4.2:13811720-13811739 | MS.gene08866:CDS | 45.0% | |
TAACATGTGAGGTGCATCAG+AGG | - | chr4.2:13810441-13810460 | None:intergenic | 45.0% | |
TACAACGAGCATGAAGCTAC+CGG | + | chr4.2:13808538-13808557 | MS.gene08866:CDS | 45.0% | |
TATTCACATGGTTGCTGGGT+TGG | + | chr4.2:13811811-13811830 | MS.gene08866:CDS | 45.0% | |
TCACACCGCAACTGAGAATA+GGG | - | chr4.2:13811856-13811875 | None:intergenic | 45.0% | |
TCAGAGGAATAACCCCATTC+TGG | - | chr4.2:13810659-13810678 | None:intergenic | 45.0% | |
TCCATCTCACATTCCTGGAA+AGG | + | chr4.2:13811379-13811398 | MS.gene08866:CDS | 45.0% | |
TCGGGAAGTAGATGAAGAGA+CGG | + | chr4.2:13811757-13811776 | MS.gene08866:CDS | 45.0% | |
TGAGGTAGTGAGAAAACAGC+TGG | - | chr4.2:13810464-13810483 | None:intergenic | 45.0% | |
TGATATTGCTCACGAGCATC+AGG | - | chr4.2:13813396-13813415 | None:intergenic | 45.0% | |
TGCAAGCAATCAGCCTAGAA+AGG | - | chr4.2:13810699-13810718 | None:intergenic | 45.0% | |
TGCATAGCACATCGAGCTTT+AGG | - | chr4.2:13811240-13811259 | None:intergenic | 45.0% | |
TGGACAAGGTTGTGCTAAGA+TGG | + | chr4.2:13813220-13813239 | MS.gene08866:CDS | 45.0% | |
TGGCAACTAGTGTGGTGAAA+TGG | - | chr4.2:13809819-13809838 | None:intergenic | 45.0% | |
TTCACACCGCAACTGAGAAT+AGG | - | chr4.2:13811857-13811876 | None:intergenic | 45.0% | |
TTCACCACACTAGTTGCCAA+AGG | + | chr4.2:13809820-13809839 | MS.gene08866:intron | 45.0% | |
TTCATCTACTTCCCGAGATC+TGG | - | chr4.2:13811753-13811772 | None:intergenic | 45.0% | |
TTGCTCATGCTTTGTGGCTT+TGG | + | chr4.2:13811123-13811142 | MS.gene08866:intron | 45.0% | |
TTTGTGTAGGCTCATGTGAG+AGG | + | chr4.2:13813150-13813169 | MS.gene08866:intron | 45.0% | |
! | AGAAAAGGAGTCGGTTTACG+GGG | + | chr4.2:13813246-13813265 | MS.gene08866:CDS | 45.0% |
! | CCCTTGATGATTCTGTGGTT+TGG | - | chr4.2:13808569-13808588 | None:intergenic | 45.0% |
! | GAGAAAAGGAGTCGGTTTAC+GGG | + | chr4.2:13813245-13813264 | MS.gene08866:CDS | 45.0% |
! | GAGATGCTCCAATTTGGCTT+TGG | - | chr4.2:13810574-13810593 | None:intergenic | 45.0% |
! | GATGCCGCAGTTTTACCAAT+TGG | - | chr4.2:13812280-13812299 | None:intergenic | 45.0% |
! | GGAGAAAAGGAGTCGGTTTA+CGG | + | chr4.2:13813244-13813263 | MS.gene08866:CDS | 45.0% |
! | GTGCATTACTTCTGGAAACC+GGG | + | chr4.2:13811409-13811428 | MS.gene08866:CDS | 45.0% |
! | TAACAGCTCATCTGGAGTTC+TGG | - | chr4.2:13811519-13811538 | None:intergenic | 45.0% |
! | TAGTTTTCCGGGTTCGTAAC+TGG | - | chr4.2:13810316-13810335 | None:intergenic | 45.0% |
! | TGTCACATCTTTTTCCCGCA+CGG | + | chr4.2:13808800-13808819 | MS.gene08866:intron | 45.0% |
!! | GCTGTTTTCTCACTACCTCA+AGG | + | chr4.2:13810464-13810483 | MS.gene08866:intron | 45.0% |
!! | TGAGAAGTATCGTCAAGCCA+AGG | + | chr4.2:13813425-13813444 | MS.gene08866:CDS | 45.0% |
!!! | TAGTTTATTTATTTATTTTT+GGG | + | chr4.2:13811965-13811984 | MS.gene08866:intron | 5.0% |
!!! | TTAGTTTATTTATTTATTTT+TGG | + | chr4.2:13811964-13811983 | MS.gene08866:intron | 5.0% |
AAGCTCGATGTGCTATGCAC+AGG | + | chr4.2:13811241-13811260 | MS.gene08866:intron | 50.0% | |
AAGCTTGTCACTGTCGCAAC+AGG | - | chr4.2:13809688-13809707 | None:intergenic | 50.0% | |
AGCAGGGTCGGTGAAATTCT+TGG | - | chr4.2:13811477-13811496 | None:intergenic | 50.0% | |
AGGGATGATGTGCAAGCAAG+AGG | + | chr4.2:13808585-13808604 | MS.gene08866:CDS | 50.0% | |
AGGTCCTAAGCAGAGTTACG+GGG | - | chr4.2:13809577-13809596 | None:intergenic | 50.0% | |
ATACAACTCAGGCAGCTGCA+CGG | + | chr4.2:13812515-13812534 | MS.gene08866:CDS | 50.0% | |
ATAGCTTCTGGTGCATCTGC+TGG | + | chr4.2:13812226-13812245 | MS.gene08866:CDS | 50.0% | |
CAAAACGTGCAGCCCAATGA+AGG | - | chr4.2:13811913-13811932 | None:intergenic | 50.0% | |
CAGTCCACCCATTGACATCA+CGG | - | chr4.2:13811889-13811908 | None:intergenic | 50.0% | |
CGAACCCGGAAAACTATAGC+TGG | + | chr4.2:13810320-13810339 | MS.gene08866:CDS | 50.0% | |
CGATCATCAGTCTTGGCAGA+TGG | - | chr4.2:13812068-13812087 | None:intergenic | 50.0% | |
CGGGAAGTAGATGAAGAGAC+GGG | + | chr4.2:13811758-13811777 | MS.gene08866:CDS | 50.0% | |
CGTGGCTTACTTCCAGATCT+CGG | + | chr4.2:13811738-13811757 | MS.gene08866:CDS | 50.0% | |
CTCTCTGGACCAGATAACCA+GGG | + | chr4.2:13808619-13808638 | MS.gene08866:CDS | 50.0% | |
CTGGTGGCTTCTCTTTCCAA+TGG | - | chr4.2:13811500-13811519 | None:intergenic | 50.0% | |
GAGGTCCTAAGCAGAGTTAC+GGG | - | chr4.2:13809578-13809597 | None:intergenic | 50.0% | |
GCGACAGTGACAAGCTTGAA+AGG | + | chr4.2:13809691-13809710 | MS.gene08866:intron | 50.0% | |
GCTTCTCTTTCCAATGGAGC+AGG | - | chr4.2:13811494-13811513 | None:intergenic | 50.0% | |
GGCAGTTGGAATCTTGGACA+AGG | + | chr4.2:13813206-13813225 | MS.gene08866:CDS | 50.0% | |
GGGTTTCAAACCAGAGATGC+AGG | + | chr4.2:13813266-13813285 | MS.gene08866:CDS | 50.0% | |
GTGGCTTACTTCCAGATCTC+GGG | + | chr4.2:13811739-13811758 | MS.gene08866:CDS | 50.0% | |
TAAGGCAGTCTCCCCAGAAT+GGG | + | chr4.2:13810643-13810662 | MS.gene08866:CDS | 50.0% | |
TCATCAGTCTTGGCAGATGG+TGG | - | chr4.2:13812065-13812084 | None:intergenic | 50.0% | |
TCATCCCTCTGATTCTGCCT+GGG | + | chr4.2:13811289-13811308 | MS.gene08866:CDS | 50.0% | |
TCTCTCTGGACCAGATAACC+AGG | + | chr4.2:13808618-13808637 | MS.gene08866:CDS | 50.0% | |
TCTCTGGACCAGATAACCAG+GGG | + | chr4.2:13808620-13808639 | MS.gene08866:CDS | 50.0% | |
TCTTTCCAATGGAGCAGGGT+CGG | - | chr4.2:13811489-13811508 | None:intergenic | 50.0% | |
TGACTTCACTGCATGACTCC+CGG | - | chr4.2:13811430-13811449 | None:intergenic | 50.0% | |
TTAAGGCAGTCTCCCCAGAA+TGG | + | chr4.2:13810642-13810661 | MS.gene08866:CDS | 50.0% | |
! | ACTGGCAGGGTATCTTTCTG+AGG | + | chr4.2:13812327-13812346 | MS.gene08866:CDS | 50.0% |
! | CTTCATTGGGCTGCACGTTT+TGG | + | chr4.2:13811911-13811930 | MS.gene08866:CDS | 50.0% |
! | TACTCAAGCTTTGCGCCGAT+TGG | + | chr4.2:13808465-13808484 | MS.gene08866:CDS | 50.0% |
!! | AGATGGCGGAGAAAAGGAGT+CGG | + | chr4.2:13813237-13813256 | MS.gene08866:CDS | 50.0% |
!! | ATTGGGCTGCACGTTTTGGA+AGG | + | chr4.2:13811915-13811934 | MS.gene08866:CDS | 50.0% |
!! | GTGCTAAGATGGCGGAGAAA+AGG | + | chr4.2:13813231-13813250 | MS.gene08866:CDS | 50.0% |
!! | TGTCTCAAGAGTGCTGTCCA+TGG | + | chr4.2:13813362-13813381 | MS.gene08866:CDS | 50.0% |
!!! | TGCTGGGTTGGGTTTTGAGT+GGG | + | chr4.2:13811823-13811842 | MS.gene08866:CDS | 50.0% |
!!! | TTGCTGGGTTGGGTTTTGAG+TGG | + | chr4.2:13811822-13811841 | MS.gene08866:CDS | 50.0% |
AAGGCAGTCTCCCCAGAATG+GGG | + | chr4.2:13810644-13810663 | MS.gene08866:CDS | 55.0% | |
ATCACCAAGCATACAGGCCC+AGG | - | chr4.2:13811309-13811328 | None:intergenic | 55.0% | |
ATCTGGTCCAGAGAGAGCTG+TGG | - | chr4.2:13808614-13808633 | None:intergenic | 55.0% | |
CATCCATTGCAGCTAGCAGC+GGG | + | chr4.2:13812296-13812315 | MS.gene08866:CDS | 55.0% | |
CATGTGAGGTGCATCAGAGG+TGG | - | chr4.2:13810438-13810457 | None:intergenic | 55.0% | |
GAGGAATCCACAGCTCTCTC+TGG | + | chr4.2:13808604-13808623 | MS.gene08866:CDS | 55.0% | |
GCATCCATTGCAGCTAGCAG+CGG | + | chr4.2:13812295-13812314 | MS.gene08866:CDS | 55.0% | |
GCTCTAGCTGTGACATTGCC+AGG | + | chr4.2:13809518-13809537 | MS.gene08866:intron | 55.0% | |
GCTGACACATAGCCTGCTCT+AGG | + | chr4.2:13809791-13809810 | MS.gene08866:intron | 55.0% | |
GGTGAAATGGTGCCTAGAGC+AGG | - | chr4.2:13809806-13809825 | None:intergenic | 55.0% | |
GTCATCCCTCTGATTCTGCC+TGG | + | chr4.2:13811288-13811307 | MS.gene08866:CDS | 55.0% | |
TGAGGTGCATCAGAGGTGGA+AGG | - | chr4.2:13810434-13810453 | None:intergenic | 55.0% | |
TTTCACCGACCCTGCTCCAT+TGG | + | chr4.2:13811481-13811500 | MS.gene08866:CDS | 55.0% | |
! | CAGCTCATCTGGAGTTCTGG+TGG | - | chr4.2:13811516-13811535 | None:intergenic | 55.0% |
!! | ATGGGTGGACTGCCCTTCAT+TGG | + | chr4.2:13811897-13811916 | MS.gene08866:CDS | 55.0% |
!! | TCAAGCTTTGCGCCGATTGG+AGG | + | chr4.2:13808468-13808487 | MS.gene08866:CDS | 55.0% |
!! | TGGGTGGACTGCCCTTCATT+GGG | + | chr4.2:13811898-13811917 | MS.gene08866:CDS | 55.0% |
ACAGGCCCAGGCAGAATCAG+AGG | - | chr4.2:13811297-13811316 | None:intergenic | 60.0% | |
ATGCCCGCTGCTAGCTGCAA+TGG | - | chr4.2:13812302-13812321 | None:intergenic | 60.0% | |
CAGGCCCAGGCAGAATCAGA+GGG | - | chr4.2:13811296-13811315 | None:intergenic | 60.0% | |
CCAGCCCCGTAACTCTGCTT+AGG | + | chr4.2:13809570-13809589 | MS.gene08866:intron | 60.0% | |
CCTAAGCAGAGTTACGGGGC+TGG | - | chr4.2:13809573-13809592 | None:intergenic | 60.0% | |
GCAGCTAGCAGCGGGCATAA+GGG | + | chr4.2:13812304-13812323 | MS.gene08866:CDS | 60.0% | |
TAGCAGCGGGCATAAGGGAC+TGG | + | chr4.2:13812309-13812328 | MS.gene08866:CDS | 60.0% | |
TCTGCCTGGGCCTGTATGCT+TGG | + | chr4.2:13811302-13811321 | MS.gene08866:CDS | 60.0% | |
TGCAGCTAGCAGCGGGCATA+AGG | + | chr4.2:13812303-13812322 | MS.gene08866:CDS | 60.0% | |
! | AGCGGGCATAAGGGACTGGC+AGG | + | chr4.2:13812313-13812332 | MS.gene08866:CDS | 65.0% |
! | GCGGGCATAAGGGACTGGCA+GGG | + | chr4.2:13812314-13812333 | MS.gene08866:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 13808409 | 13813750 | 13808409 | ID=MS.gene08866 |
chr4.2 | mRNA | 13808409 | 13813750 | 13808409 | ID=MS.gene08866.t1;Parent=MS.gene08866 |
chr4.2 | exon | 13808409 | 13808673 | 13808409 | ID=MS.gene08866.t1.exon1;Parent=MS.gene08866.t1 |
chr4.2 | CDS | 13808409 | 13808673 | 13808409 | ID=cds.MS.gene08866.t1;Parent=MS.gene08866.t1 |
chr4.2 | exon | 13810060 | 13810160 | 13810060 | ID=MS.gene08866.t1.exon2;Parent=MS.gene08866.t1 |
chr4.2 | CDS | 13810060 | 13810160 | 13810060 | ID=cds.MS.gene08866.t1;Parent=MS.gene08866.t1 |
chr4.2 | exon | 13810283 | 13810373 | 13810283 | ID=MS.gene08866.t1.exon3;Parent=MS.gene08866.t1 |
chr4.2 | CDS | 13810283 | 13810373 | 13810283 | ID=cds.MS.gene08866.t1;Parent=MS.gene08866.t1 |
chr4.2 | exon | 13810465 | 13810688 | 13810465 | ID=MS.gene08866.t1.exon4;Parent=MS.gene08866.t1 |
chr4.2 | CDS | 13810465 | 13810688 | 13810465 | ID=cds.MS.gene08866.t1;Parent=MS.gene08866.t1 |
chr4.2 | exon | 13811263 | 13811936 | 13811263 | ID=MS.gene08866.t1.exon5;Parent=MS.gene08866.t1 |
chr4.2 | CDS | 13811263 | 13811936 | 13811263 | ID=cds.MS.gene08866.t1;Parent=MS.gene08866.t1 |
chr4.2 | exon | 13812204 | 13812786 | 13812204 | ID=MS.gene08866.t1.exon6;Parent=MS.gene08866.t1 |
chr4.2 | CDS | 13812204 | 13812786 | 13812204 | ID=cds.MS.gene08866.t1;Parent=MS.gene08866.t1 |
chr4.2 | exon | 13813159 | 13813446 | 13813159 | ID=MS.gene08866.t1.exon7;Parent=MS.gene08866.t1 |
chr4.2 | CDS | 13813159 | 13813446 | 13813159 | ID=cds.MS.gene08866.t1;Parent=MS.gene08866.t1 |
chr4.2 | exon | 13813599 | 13813624 | 13813599 | ID=MS.gene08866.t1.exon8;Parent=MS.gene08866.t1 |
chr4.2 | CDS | 13813599 | 13813624 | 13813599 | ID=cds.MS.gene08866.t1;Parent=MS.gene08866.t1 |
chr4.2 | exon | 13813714 | 13813750 | 13813714 | ID=MS.gene08866.t1.exon9;Parent=MS.gene08866.t1 |
chr4.2 | CDS | 13813714 | 13813750 | 13813714 | ID=cds.MS.gene08866.t1;Parent=MS.gene08866.t1 |
Gene Sequence |
Protein sequence |