Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09296.t1 | XP_003629676.1 | 95.8 | 355 | 15 | 0 | 1 | 355 | 1 | 355 | 4.40E-180 | 640.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09296.t1 | Q8K245 | 25.6 | 313 | 176 | 8 | 31 | 339 | 195 | 454 | 5.3e-09 | 63.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09296.t1 | G7LHV8 | 95.8 | 355 | 15 | 0 | 1 | 355 | 1 | 355 | 3.2e-180 | 640.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055555 | MS.gene09296 | 0.824969 | 6.05E-54 | -1.69E-46 |
| MS.gene056986 | MS.gene09296 | 0.822325 | 2.52E-53 | -1.69E-46 |
| MS.gene057102 | MS.gene09296 | 0.817223 | 3.69E-52 | -1.69E-46 |
| MS.gene057999 | MS.gene09296 | 0.801721 | 7.88E-49 | -1.69E-46 |
| MS.gene06011 | MS.gene09296 | 0.827573 | 1.45E-54 | -1.69E-46 |
| MS.gene060763 | MS.gene09296 | 0.831797 | 1.36E-55 | -1.69E-46 |
| MS.gene060830 | MS.gene09296 | 0.808931 | 2.43E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09296.t1 | MTR_8g085350 | 95.775 | 355 | 15 | 0 | 1 | 355 | 1 | 355 | 0.0 | 667 |
| MS.gene09296.t1 | MTR_8g085350 | 95.374 | 281 | 13 | 0 | 75 | 355 | 1 | 281 | 0.0 | 546 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09296.t1 | AT2G32760 | 57.478 | 341 | 141 | 1 | 14 | 354 | 16 | 352 | 3.78e-134 | 387 |
| MS.gene09296.t1 | AT2G32760 | 57.143 | 280 | 116 | 1 | 75 | 354 | 1 | 276 | 2.44e-108 | 318 |
| MS.gene09296.t1 | AT2G32760 | 57.143 | 280 | 116 | 1 | 75 | 354 | 1 | 276 | 2.44e-108 | 318 |
Find 65 sgRNAs with CRISPR-Local
Find 323 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGGGATCTTTGACGATTC+AGG | 0.228077 | 4.1:+14216646 | MS.gene09296:CDS |
| TTTCATTGGTGCCAAGAGTT+TGG | 0.285433 | 4.1:+14218323 | MS.gene09296:CDS |
| GAGCTTGAAGCATATCCTTT+AGG | 0.322768 | 4.1:+14216352 | MS.gene09296:CDS |
| GTCAAAGATCCCTGATTAAC+TGG | 0.323069 | 4.1:-14216638 | None:intergenic |
| CGAACATAAACCAGTTAATC+AGG | 0.328631 | 4.1:+14216628 | MS.gene09296:CDS |
| TTCATTGGTGCCAAGAGTTT+GGG | 0.329102 | 4.1:+14218324 | MS.gene09296:CDS |
| CTGATTAACTGGTTTATGTT+CGG | 0.346972 | 4.1:-14216627 | None:intergenic |
| AGAATATGTCTATACGTTCT+AGG | 0.347316 | 4.1:+14214180 | MS.gene09296:CDS |
| TGGTGCTTTGCAGTCACTTT+TGG | 0.354409 | 4.1:+14214244 | MS.gene09296:CDS |
| AGATTACTGTCTGAAGAAAA+TGG | 0.354501 | 4.1:+14216214 | MS.gene09296:CDS |
| GAAAATTGCAAAAGATTCTA+AGG | 0.354960 | 4.1:+14216251 | MS.gene09296:CDS |
| AAGGTTTCGTTTCTTCTCCT+TGG | 0.365059 | 4.1:-14213907 | None:intergenic |
| TTTGTCTGTGAGCAGTTTAA+TGG | 0.374286 | 4.1:+14214086 | MS.gene09296:intron |
| TGATTAACTGGTTTATGTTC+GGG | 0.378393 | 4.1:-14216626 | None:intergenic |
| CAGAAATCTGCTACAGCCTT+AGG | 0.383257 | 4.1:+14216731 | MS.gene09296:CDS |
| GCAGTTTAATGGTGAATCAT+TGG | 0.389497 | 4.1:+14214097 | MS.gene09296:intron |
| TGTAACTAGCAGAAACCTTC+AGG | 0.394811 | 4.1:+14214286 | MS.gene09296:CDS |
| TCAAGCTCTTGCTCTTGTGC+TGG | 0.402870 | 4.1:-14216337 | None:intergenic |
| TTCGTTTCTTCTCCTTGGCT+TGG | 0.413812 | 4.1:-14213902 | None:intergenic |
| TCAATCAGTCGAACATCATC+TGG | 0.420031 | 4.1:-14213822 | None:intergenic |
| AAGCTGCTCTTGTTGTGTCT+TGG | 0.428578 | 4.1:-14217246 | None:intergenic |
| CAGGGATCTTTGACGATTCA+GGG | 0.428687 | 4.1:+14216647 | MS.gene09296:CDS |
| TTTGGGACCACGCCATGTAT+TGG | 0.432082 | 4.1:+14218341 | MS.gene09296:CDS |
| CCATGTATTGGCCAATTTGA+GGG | 0.446415 | 4.1:+14218353 | MS.gene09296:CDS |
| CAGTTTAATGGTGAATCATT+GGG | 0.476087 | 4.1:+14214098 | MS.gene09296:intron |
| TATCTATAAAAGCTGAAGAC+TGG | 0.479434 | 4.1:-14218392 | None:intergenic |
| CCCTCAAATTGGCCAATACA+TGG | 0.486575 | 4.1:-14218353 | None:intergenic |
| GCCATGTATTGGCCAATTTG+AGG | 0.487775 | 4.1:+14218352 | MS.gene09296:CDS |
| TAAGGAGGATGCTGGTAAGC+AGG | 0.488908 | 4.1:+14214208 | MS.gene09296:CDS |
| TACCTTGCTTAGTAAGAATA+CGG | 0.490664 | 4.1:-14217272 | None:intergenic |
| GAGACTCGAGTTTGTGCTGA+AGG | 0.493087 | 4.1:-14213926 | None:intergenic |
| CTACGCTATCCCGTACGGTT+GGG | 0.495309 | 4.1:+14217100 | MS.gene09296:CDS |
| ATGATGTTCGACTGATTGAC+TGG | 0.498273 | 4.1:+14213826 | MS.gene09296:CDS |
| TGCCGTATTCTTACTAAGCA+AGG | 0.505027 | 4.1:+14217270 | MS.gene09296:CDS |
| TAGAGGAACTTGCAAGTATG+AGG | 0.508832 | 4.1:-14217080 | None:intergenic |
| ATGGCGTGGTCCCAAACTCT+TGG | 0.511357 | 4.1:-14218334 | None:intergenic |
| GGAATCAAAGAAATTGATCA+TGG | 0.514210 | 4.1:+14214157 | MS.gene09296:CDS |
| TTCCTCTACGCTATCCCGTA+CGG | 0.519170 | 4.1:+14217095 | MS.gene09296:CDS |
| AAGCAGGAGGAGCAACTTAG+TGG | 0.523359 | 4.1:+14214224 | MS.gene09296:CDS |
| TGCAAAAGATTCTAAGGATG+AGG | 0.525190 | 4.1:+14216257 | MS.gene09296:CDS |
| TCTACGCTATCCCGTACGGT+TGG | 0.525579 | 4.1:+14217099 | MS.gene09296:CDS |
| AAGGATGAGGCAACAATACA+TGG | 0.532227 | 4.1:+14216270 | MS.gene09296:CDS |
| ATATGCTTGGCATTTGTGAA+AGG | 0.535167 | 4.1:-14217199 | None:intergenic |
| TATCCTTTAGGTAGTTCAGC+AGG | 0.536534 | 4.1:+14216364 | MS.gene09296:CDS |
| CAAACTCGAGTCTCTCATCC+AGG | 0.545300 | 4.1:+14213935 | MS.gene09296:CDS |
| TATACGTTCTAGGCTGGCTA+AGG | 0.546829 | 4.1:+14214190 | MS.gene09296:CDS |
| GTCAATAATATATGAATGAG+AGG | 0.554475 | 4.1:-14217125 | None:intergenic |
| ACGTTCTAGGCTGGCTAAGG+AGG | 0.558899 | 4.1:+14214193 | MS.gene09296:CDS |
| TATGTCTATACGTTCTAGGC+TGG | 0.561598 | 4.1:+14214184 | MS.gene09296:CDS |
| ATGAGAGGCACCCAACCGTA+CGG | 0.571866 | 4.1:-14217110 | None:intergenic |
| TGAGAGGCACCCAACCGTAC+GGG | 0.574841 | 4.1:-14217109 | None:intergenic |
| TTACCTGCTGAACTACCTAA+AGG | 0.575586 | 4.1:-14216367 | None:intergenic |
| TACATGTGCAACATATCCTA+AGG | 0.579587 | 4.1:-14216747 | None:intergenic |
| TCGAACATCATCTGGATCAG+TGG | 0.601549 | 4.1:-14213814 | None:intergenic |
| TTCTGCTCTTAACCAAGCCA+AGG | 0.604417 | 4.1:+14213890 | MS.gene09296:CDS |
| GATAGAGCTAACTTCTTCTG+AGG | 0.606180 | 4.1:+14217159 | MS.gene09296:CDS |
| GAACATAAACCAGTTAATCA+GGG | 0.606763 | 4.1:+14216629 | MS.gene09296:CDS |
| AGAAGAAGTTAGCTCTATCG+AGG | 0.617283 | 4.1:-14217155 | None:intergenic |
| TTAACTGGTTTATGTTCGGG+AGG | 0.640495 | 4.1:-14216623 | None:intergenic |
| AAATTGGCCAATACATGGCG+TGG | 0.644596 | 4.1:-14218348 | None:intergenic |
| GGAGGATGCTGGTAAGCAGG+AGG | 0.648190 | 4.1:+14214211 | MS.gene09296:CDS |
| AGGCTGGCTAAGGAGGATGC+TGG | 0.655911 | 4.1:+14214200 | MS.gene09296:CDS |
| AACCGTACGGGATAGCGTAG+AGG | 0.681236 | 4.1:-14217097 | None:intergenic |
| GAAGAAGTTAGCTCTATCGA+GGG | 0.683985 | 4.1:-14217154 | None:intergenic |
| TGATGTTCGACTGATTGACT+GGG | 0.717969 | 4.1:+14213827 | MS.gene09296:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAATTAAATTTTTAAAAAT+CGG | + | chr4.1:14214502-14214521 | MS.gene09296:intron | 0.0% |
| !! | TAACTAAAATAAACTATTTA+GGG | + | chr4.1:14213998-14214017 | MS.gene09296:intron | 10.0% |
| !! | TTAACTAAAATAAACTATTT+AGG | + | chr4.1:14213997-14214016 | MS.gene09296:intron | 10.0% |
| !! | AAAAAAAAAAAAAACTCTCA+AGG | + | chr4.1:14215922-14215941 | MS.gene09296:intron | 15.0% |
| !! | AAAAAAAAAAAAACTCTCAA+GGG | + | chr4.1:14215923-14215942 | MS.gene09296:intron | 15.0% |
| !! | GAAGATATTAATATATATGT+GGG | - | chr4.1:14217305-14217324 | None:intergenic | 15.0% |
| !! | TGTAAAAAATATGAACTTAT+TGG | - | chr4.1:14215835-14215854 | None:intergenic | 15.0% |
| !!! | ATTAAATTTTTAAAAATCGG+CGG | + | chr4.1:14214505-14214524 | MS.gene09296:intron | 15.0% |
| !! | AAATTAAGCAAATGATAAAG+GGG | - | chr4.1:14217431-14217450 | None:intergenic | 20.0% |
| !! | AATAAAACCAGTGAATATTA+TGG | - | chr4.1:14215953-14215972 | None:intergenic | 20.0% |
| !! | ACAAATTAAGCAAATGATAA+AGG | - | chr4.1:14217433-14217452 | None:intergenic | 20.0% |
| !! | ACTATAAACATAGATAATCT+TGG | - | chr4.1:14214671-14214690 | None:intergenic | 20.0% |
| !! | ACTATACAAATGAAATAGAA+AGG | - | chr4.1:14214854-14214873 | None:intergenic | 20.0% |
| !! | AGCATATTTCAACAATTATT+AGG | - | chr4.1:14217017-14217036 | None:intergenic | 20.0% |
| !! | CAAATTAAGCAAATGATAAA+GGG | - | chr4.1:14217432-14217451 | None:intergenic | 20.0% |
| !! | CATATAAAAGAAGAAATTTG+AGG | + | chr4.1:14216456-14216475 | MS.gene09296:intron | 20.0% |
| !! | GATCATCATCATATAATAAA+AGG | - | chr4.1:14217491-14217510 | None:intergenic | 20.0% |
| !! | GGAAGATATTAATATATATG+TGG | - | chr4.1:14217306-14217325 | None:intergenic | 20.0% |
| !! | TAGTTATAGTATGAGATTTA+AGG | - | chr4.1:14215871-14215890 | None:intergenic | 20.0% |
| !! | TTATATACAGAAAACTTGAT+TGG | + | chr4.1:14216909-14216928 | MS.gene09296:intron | 20.0% |
| !! | TTCTATTTCATTTGTATAGT+TGG | + | chr4.1:14214854-14214873 | MS.gene09296:intron | 20.0% |
| !! | TTGTTAGTTAAATCCATATT+AGG | + | chr4.1:14215248-14215267 | MS.gene09296:intron | 20.0% |
| !!! | AGAATTAGGTTTTTCATATA+GGG | + | chr4.1:14213974-14213993 | MS.gene09296:intron | 20.0% |
| !!! | ATAATATTCACTGGTTTTAT+TGG | + | chr4.1:14215952-14215971 | MS.gene09296:intron | 20.0% |
| !!! | ATGTTTTTATTTAGACTGAA+TGG | + | chr4.1:14215290-14215309 | MS.gene09296:intron | 20.0% |
| !!! | ATTTGCTTAATTTGTTTGTT+TGG | + | chr4.1:14217438-14217457 | MS.gene09296:intron | 20.0% |
| !!! | CAACTTTTAAAAACATTACA+AGG | - | chr4.1:14217899-14217918 | None:intergenic | 20.0% |
| !!! | GTTTTCTTGTGATAATATTA+TGG | - | chr4.1:14215742-14215761 | None:intergenic | 20.0% |
| !!! | TAATATTCACTGGTTTTATT+GGG | + | chr4.1:14215953-14215972 | MS.gene09296:intron | 20.0% |
| !!! | TGGAAAATTACTTTCTTTTT+AGG | + | chr4.1:14215179-14215198 | MS.gene09296:intron | 20.0% |
| !!! | TTAAATTTTTAAAAATCGGC+GGG | + | chr4.1:14214506-14214525 | MS.gene09296:intron | 20.0% |
| !!! | TTTGCTTAATTTGTTTGTTT+GGG | + | chr4.1:14217439-14217458 | MS.gene09296:intron | 20.0% |
| !!! | TTTTTTTTTTTCTTTCATCC+CGG | + | chr4.1:14214446-14214465 | MS.gene09296:intron | 20.0% |
| ! | AAAACACAATAAGTTCACTA+CGG | - | chr4.1:14218040-14218059 | None:intergenic | 25.0% |
| ! | AAAATTAAACGAACAAAGAG+TGG | - | chr4.1:14218169-14218188 | None:intergenic | 25.0% |
| ! | AAATTAAACGAACAAAGAGT+GGG | - | chr4.1:14218168-14218187 | None:intergenic | 25.0% |
| ! | AACACACATACTATAAAGTA+TGG | - | chr4.1:14215492-14215511 | None:intergenic | 25.0% |
| ! | AATAGGCATTTAAACTGTTT+AGG | + | chr4.1:14214898-14214917 | MS.gene09296:intron | 25.0% |
| ! | AATATCTGAAAAGAGAACAA+AGG | - | chr4.1:14216939-14216958 | None:intergenic | 25.0% |
| ! | AATTAAGCAAATGATAAAGG+GGG | - | chr4.1:14217430-14217449 | None:intergenic | 25.0% |
| ! | ACTCAAAATGTCAACTAAAA+TGG | - | chr4.1:14214592-14214611 | None:intergenic | 25.0% |
| ! | AGATTTGGAAATTAATGAGT+TGG | + | chr4.1:14215066-14215085 | MS.gene09296:intron | 25.0% |
| ! | AGCAATAAATTTCTCAAAGA+AGG | - | chr4.1:14215416-14215435 | None:intergenic | 25.0% |
| ! | AGCGTATAAGGAATTATAAA+CGG | + | chr4.1:14214626-14214645 | MS.gene09296:intron | 25.0% |
| ! | AGCTTTCAAACTACAATAAT+AGG | - | chr4.1:14216166-14216185 | None:intergenic | 25.0% |
| ! | ATGATGATATTTATTCTGTG+TGG | + | chr4.1:14216401-14216420 | MS.gene09296:intron | 25.0% |
| ! | GAAAATTGCAAAAGATTCTA+AGG | + | chr4.1:14216251-14216270 | MS.gene09296:CDS | 25.0% |
| ! | GATGTAACTATTATGTTCTT+TGG | + | chr4.1:14215792-14215811 | MS.gene09296:intron | 25.0% |
| ! | GATTTGGAAATTAATGAGTT+GGG | + | chr4.1:14215067-14215086 | MS.gene09296:intron | 25.0% |
| ! | GTCAATAATATATGAATGAG+AGG | - | chr4.1:14217128-14217147 | None:intergenic | 25.0% |
| ! | TAGTTAAATCCATATTAGGT+GGG | + | chr4.1:14215252-14215271 | MS.gene09296:intron | 25.0% |
| ! | TGCAAATACAAAAAGTTGTA+CGG | - | chr4.1:14216024-14216043 | None:intergenic | 25.0% |
| ! | TGGAAAAAAGTTATTGGAAA+AGG | - | chr4.1:14215338-14215357 | None:intergenic | 25.0% |
| ! | TGGTTGACATTATGAATAAT+AGG | + | chr4.1:14214881-14214900 | MS.gene09296:intron | 25.0% |
| ! | TGTTGCATATATTAATAGCT+TGG | + | chr4.1:14215770-14215789 | MS.gene09296:intron | 25.0% |
| ! | TTAGTTAAATCCATATTAGG+TGG | + | chr4.1:14215251-14215270 | MS.gene09296:intron | 25.0% |
| ! | TTATACCATACACCATATTT+CGG | - | chr4.1:14215093-14215112 | None:intergenic | 25.0% |
| !! | AAATCGTATCACATGATTTT+TGG | - | chr4.1:14216858-14216877 | None:intergenic | 25.0% |
| !! | AAATTTTGTATTCTCAACTG+TGG | + | chr4.1:14216959-14216978 | MS.gene09296:intron | 25.0% |
| !! | AACTCATGTGTTTTCATAAT+TGG | - | chr4.1:14214400-14214419 | None:intergenic | 25.0% |
| !! | ACCTATAAATTTTGTAGCAA+GGG | + | chr4.1:14214981-14215000 | MS.gene09296:intron | 25.0% |
| !! | ATATGAACTTATTGGTTACA+AGG | - | chr4.1:14215827-14215846 | None:intergenic | 25.0% |
| !! | CAGAATTAGGTTTTTCATAT+AGG | + | chr4.1:14213973-14213992 | MS.gene09296:intron | 25.0% |
| !! | CTGGGTAATTTTTAAACATA+AGG | - | chr4.1:14214938-14214957 | None:intergenic | 25.0% |
| !! | GCTTGTTGGTTAATAATATT+TGG | - | chr4.1:14217741-14217760 | None:intergenic | 25.0% |
| !! | GGTTTTCTATTCCTTAAATT+GGG | + | chr4.1:14216507-14216526 | MS.gene09296:intron | 25.0% |
| !! | TAGTTTGCAATTTCCTAAAT+CGG | + | chr4.1:14214687-14214706 | MS.gene09296:intron | 25.0% |
| !! | TGGTTTTCTATTCCTTAAAT+TGG | + | chr4.1:14216506-14216525 | MS.gene09296:intron | 25.0% |
| !!! | AACTATTTAGGGTTTTTAGT+TGG | + | chr4.1:14214009-14214028 | MS.gene09296:intron | 25.0% |
| !!! | ATTCAACAGACTTTTTCAAA+TGG | - | chr4.1:14218073-14218092 | None:intergenic | 25.0% |
| !!! | GAGTTTTTTCACAGATAAAA+AGG | + | chr4.1:14216703-14216722 | MS.gene09296:CDS | 25.0% |
| !!! | TCGTGTGATGTTTTATTTTT+GGG | + | chr4.1:14214477-14214496 | MS.gene09296:intron | 25.0% |
| !!! | TTTTAGTTGACATTTTGAGT+AGG | + | chr4.1:14214592-14214611 | MS.gene09296:intron | 25.0% |
| !!! | TTTTTTTTTTCTTTCATCCC+GGG | + | chr4.1:14214447-14214466 | MS.gene09296:intron | 25.0% |
| AAAATAAATGTGAGCGACAT+TGG | + | chr4.1:14217935-14217954 | MS.gene09296:intron | 30.0% | |
| AAATCACCTAGAAAAACTAC+CGG | + | chr4.1:14215028-14215047 | MS.gene09296:intron | 30.0% | |
| AAGGATTCTAATGTTATTCC+AGG | - | chr4.1:14217987-14218006 | None:intergenic | 30.0% | |
| AATTTGTAGACATCCGATTT+AGG | - | chr4.1:14214703-14214722 | None:intergenic | 30.0% | |
| ACTGTTTAGGTGTTTCTTAA+AGG | + | chr4.1:14214911-14214930 | MS.gene09296:intron | 30.0% | |
| AGAATATGTCTATACGTTCT+AGG | + | chr4.1:14214180-14214199 | MS.gene09296:CDS | 30.0% | |
| AGAGACTATTAGGAAAGATT+TGG | + | chr4.1:14215051-14215070 | MS.gene09296:intron | 30.0% | |
| AGATTACTGTCTGAAGAAAA+TGG | + | chr4.1:14216214-14216233 | MS.gene09296:CDS | 30.0% | |
| AGGATTCTAATGTTATTCCA+GGG | - | chr4.1:14217986-14218005 | None:intergenic | 30.0% | |
| ATAACTACTCTCAATTCTCA+GGG | + | chr4.1:14215884-14215903 | MS.gene09296:intron | 30.0% | |
| ATTCCTAAGAATATGATTCC+AGG | - | chr4.1:14217823-14217842 | None:intergenic | 30.0% | |
| ATTCTTAGGAATAAGATCTC+TGG | + | chr4.1:14217831-14217850 | MS.gene09296:intron | 30.0% | |
| CAAATAACACAGATGTGAAA+TGG | - | chr4.1:14215541-14215560 | None:intergenic | 30.0% | |
| CACATACTATAAAGTATGGA+TGG | - | chr4.1:14215488-14215507 | None:intergenic | 30.0% | |
| CAGTTTAATGGTGAATCATT+GGG | + | chr4.1:14214098-14214117 | MS.gene09296:intron | 30.0% | |
| CCATCAATATAGAAAAGTCT+GGG | - | chr4.1:14214956-14214975 | None:intergenic | 30.0% | |
| CTAAGAAAGGAAAGACAAAA+TGG | - | chr4.1:14214537-14214556 | None:intergenic | 30.0% | |
| GAACATAAACCAGTTAATCA+GGG | + | chr4.1:14216629-14216648 | MS.gene09296:CDS | 30.0% | |
| GAGACATGGAAAAAAGTTAT+TGG | - | chr4.1:14215344-14215363 | None:intergenic | 30.0% | |
| GATATATAGACAAGCGTATA+AGG | + | chr4.1:14214614-14214633 | MS.gene09296:intron | 30.0% | |
| GCATAAAGATATAAGATCTG+AGG | - | chr4.1:14216801-14216820 | None:intergenic | 30.0% | |
| GGAATCAAAGAAATTGATCA+TGG | + | chr4.1:14214157-14214176 | MS.gene09296:CDS | 30.0% | |
| TAAACGGTTGTAGATGTAAA+CGG | + | chr4.1:14214642-14214661 | MS.gene09296:intron | 30.0% | |
| TACCTTGCTTAGTAAGAATA+CGG | - | chr4.1:14217275-14217294 | None:intergenic | 30.0% | |
| TATAACTACTCTCAATTCTC+AGG | + | chr4.1:14215883-14215902 | MS.gene09296:intron | 30.0% | |
| TATCTATAAAAGCTGAAGAC+TGG | - | chr4.1:14218395-14218414 | None:intergenic | 30.0% | |
| TCTAAAAAGTTCCCTCAAAT+TGG | - | chr4.1:14218367-14218386 | None:intergenic | 30.0% | |
| TGGTGTATGGTATAACATTA+TGG | + | chr4.1:14215098-14215117 | MS.gene09296:intron | 30.0% | |
| TGTGAGTTACAAACTGTAAA+AGG | + | chr4.1:14215987-14216006 | MS.gene09296:intron | 30.0% | |
| TTCCTAAGAATATGATTCCA+GGG | - | chr4.1:14217822-14217841 | None:intergenic | 30.0% | |
| TTCTTAGGAATAAGATCTCT+GGG | + | chr4.1:14217832-14217851 | MS.gene09296:intron | 30.0% | |
| ! | ACAACTTTTTGTATTTGCAG+TGG | + | chr4.1:14216025-14216044 | MS.gene09296:intron | 30.0% |
| ! | ACATGTAACTAGGAAGTTTT+AGG | + | chr4.1:14215580-14215599 | MS.gene09296:intron | 30.0% |
| ! | ACTTTCCTAAAGCATCATAT+TGG | + | chr4.1:14217594-14217613 | MS.gene09296:intron | 30.0% |
| ! | ATCATACTGATAGCACTTTT+GGG | + | chr4.1:14216097-14216116 | MS.gene09296:intron | 30.0% |
| ! | ATGTGTTTTCATAATTGGTG+TGG | - | chr4.1:14214395-14214414 | None:intergenic | 30.0% |
| ! | ATTTTGAGCATGATCTTGTT+AGG | + | chr4.1:14213853-14213872 | MS.gene09296:CDS | 30.0% |
| ! | CCAGACTTTTCTATATTGAT+GGG | + | chr4.1:14214954-14214973 | MS.gene09296:intron | 30.0% |
| ! | CCTATAAATTTTGTAGCAAG+GGG | + | chr4.1:14214982-14215001 | MS.gene09296:intron | 30.0% |
| ! | CTGATTAACTGGTTTATGTT+CGG | - | chr4.1:14216630-14216649 | None:intergenic | 30.0% |
| ! | GACCTATAAATTTTGTAGCA+AGG | + | chr4.1:14214980-14214999 | MS.gene09296:intron | 30.0% |
| ! | TATAAGATCTGAGGTAAAGA+AGG | - | chr4.1:14216792-14216811 | None:intergenic | 30.0% |
| ! | TATCATACTGATAGCACTTT+TGG | + | chr4.1:14216096-14216115 | MS.gene09296:intron | 30.0% |
| ! | TCATTTGTATAGTTGGTACT+TGG | + | chr4.1:14214861-14214880 | MS.gene09296:intron | 30.0% |
| ! | TGATTAACTGGTTTATGTTC+GGG | - | chr4.1:14216629-14216648 | None:intergenic | 30.0% |
| !! | AATAGCGCTTTAAAGAAGTT+TGG | + | chr4.1:14217558-14217577 | MS.gene09296:intron | 30.0% |
| !! | TTTCACATCTGTGTTATTTG+AGG | + | chr4.1:14215541-14215560 | MS.gene09296:intron | 30.0% |
| !!! | ACAGACTTTTTCAAATGGTT+AGG | - | chr4.1:14218068-14218087 | None:intergenic | 30.0% |
| !!! | AGGGTGTGTTTTTTTTGAAA+CGG | + | chr4.1:14217715-14217734 | MS.gene09296:intron | 30.0% |
| !!! | CACTCATTTTTTCTGATTGT+AGG | + | chr4.1:14218281-14218300 | MS.gene09296:intron | 30.0% |
| !!! | CCAAATAAGATTTTGAGGTT+GGG | + | chr4.1:14215624-14215643 | MS.gene09296:intron | 30.0% |
| !!! | GTCGTGTGATGTTTTATTTT+TGG | + | chr4.1:14214476-14214495 | MS.gene09296:intron | 30.0% |
| !!! | TCCAAATAAGATTTTGAGGT+TGG | + | chr4.1:14215623-14215642 | MS.gene09296:intron | 30.0% |
| AAACGGTTGTAGATGTAAAC+GGG | + | chr4.1:14214643-14214662 | MS.gene09296:intron | 35.0% | |
| AATAGAAAACCAAGAGAGAG+TGG | - | chr4.1:14216498-14216517 | None:intergenic | 35.0% | |
| AGCATCATATTGGATTGCTT+TGG | + | chr4.1:14217604-14217623 | MS.gene09296:intron | 35.0% | |
| ATAACCATCCGAATTTGTGT+TGG | - | chr4.1:14214826-14214845 | None:intergenic | 35.0% | |
| ATAACTCTCGTTGCTAAGAA+AGG | - | chr4.1:14214550-14214569 | None:intergenic | 35.0% | |
| ATAAGATTTGTGTGTGTAGG+AGG | - | chr4.1:14215368-14215387 | None:intergenic | 35.0% | |
| ATATGCTTGGCATTTGTGAA+AGG | - | chr4.1:14217202-14217221 | None:intergenic | 35.0% | |
| ATCTTTCCTAATAGTCTCTC+CGG | - | chr4.1:14215050-14215069 | None:intergenic | 35.0% | |
| ATGGCTTCATCCTTATGAAA+AGG | - | chr4.1:14215723-14215742 | None:intergenic | 35.0% | |
| CCCAACCTCAAAATCTTATT+TGG | - | chr4.1:14215627-14215646 | None:intergenic | 35.0% | |
| CCCATCAATATAGAAAAGTC+TGG | - | chr4.1:14214957-14214976 | None:intergenic | 35.0% | |
| CCCCTTGCTACAAAATTTAT+AGG | - | chr4.1:14214985-14215004 | None:intergenic | 35.0% | |
| CGAACATAAACCAGTTAATC+AGG | + | chr4.1:14216628-14216647 | MS.gene09296:CDS | 35.0% | |
| CTCAGTCATGTCTTACTTTA+GGG | - | chr4.1:14216434-14216453 | None:intergenic | 35.0% | |
| CTTCATCCTTATGAAAAGGA+AGG | - | chr4.1:14215719-14215738 | None:intergenic | 35.0% | |
| GAAGTAAACAGTGAACAAGA+GGG | - | chr4.1:14217383-14217402 | None:intergenic | 35.0% | |
| GCAATCCAATATGATGCTTT+AGG | - | chr4.1:14217602-14217621 | None:intergenic | 35.0% | |
| GCAGTTTAATGGTGAATCAT+TGG | + | chr4.1:14214097-14214116 | MS.gene09296:intron | 35.0% | |
| GGTTCAACCAAAAACTTTAC+AGG | - | chr4.1:14216319-14216338 | None:intergenic | 35.0% | |
| TAACTACTCTCAATTCTCAG+GGG | + | chr4.1:14215885-14215904 | MS.gene09296:intron | 35.0% | |
| TAAGATTTGTGTGTGTAGGA+GGG | - | chr4.1:14215367-14215386 | None:intergenic | 35.0% | |
| TAATAGTGTTCATTCACTGC+TGG | + | chr4.1:14215444-14215463 | MS.gene09296:intron | 35.0% | |
| TACATGTGCAACATATCCTA+AGG | - | chr4.1:14216750-14216769 | None:intergenic | 35.0% | |
| TAGACTTTCTTCTTCTTCTC+AGG | + | chr4.1:14217042-14217061 | MS.gene09296:intron | 35.0% | |
| TATACCATAAACTGACCTGA+AGG | - | chr4.1:14214304-14214323 | None:intergenic | 35.0% | |
| TCAGTCATGTCTTACTTTAG+GGG | - | chr4.1:14216433-14216452 | None:intergenic | 35.0% | |
| TCCATAAGATTTGTGTGTGT+AGG | - | chr4.1:14215371-14215390 | None:intergenic | 35.0% | |
| TCCTACACACACAAATCTTA+TGG | + | chr4.1:14215367-14215386 | MS.gene09296:intron | 35.0% | |
| TCTTCTTACAGTCAACATGA+AGG | - | chr4.1:14217674-14217693 | None:intergenic | 35.0% | |
| TGAAGAGATGCGTCAAAAAT+TGG | + | chr4.1:14214136-14214155 | MS.gene09296:CDS | 35.0% | |
| TGAAGTAAACAGTGAACAAG+AGG | - | chr4.1:14217384-14217403 | None:intergenic | 35.0% | |
| TTCCCTGGAATCATATTCTT+AGG | + | chr4.1:14217817-14217836 | MS.gene09296:intron | 35.0% | |
| TTTGTCTGTGAGCAGTTTAA+TGG | + | chr4.1:14214086-14214105 | MS.gene09296:intron | 35.0% | |
| ! | AGAAATTTGAGGTGCTAAGA+TGG | + | chr4.1:14216467-14216486 | MS.gene09296:intron | 35.0% |
| ! | AGGTTTGAAATTACATTCCC+TGG | + | chr4.1:14217802-14217821 | MS.gene09296:intron | 35.0% |
| ! | AGTTTTACCAAACACATGAG+TGG | - | chr4.1:14217868-14217887 | None:intergenic | 35.0% |
| ! | AGTTTTTGTATGGCTCATGT+GGG | + | chr4.1:14216983-14217002 | MS.gene09296:intron | 35.0% |
| ! | ATTGACTTTGTCTGGTAGAT+TGG | + | chr4.1:14218097-14218116 | MS.gene09296:intron | 35.0% |
| ! | CAACTGTGGTAGTTTTTGTA+TGG | + | chr4.1:14216973-14216992 | MS.gene09296:intron | 35.0% |
| ! | CCCAGACTTTTCTATATTGA+TGG | + | chr4.1:14214953-14214972 | MS.gene09296:intron | 35.0% |
| ! | CTAAGGGTGTGTTTATTTCA+AGG | + | chr4.1:14217782-14217801 | MS.gene09296:intron | 35.0% |
| ! | GAGCAGCTTTTGAATTTCAT+TGG | + | chr4.1:14218309-14218328 | MS.gene09296:CDS | 35.0% |
| ! | GCTCTCCAAATAAGATTTTG+AGG | + | chr4.1:14215619-14215638 | MS.gene09296:intron | 35.0% |
| ! | GCTGATGATGCTGTTATTAT+AGG | + | chr4.1:14216183-14216202 | MS.gene09296:intron | 35.0% |
| ! | GCTGTATCCTGTAAAGTTTT+TGG | + | chr4.1:14216309-14216328 | MS.gene09296:CDS | 35.0% |
| ! | GTCTTGGCCTTCTAAAAATA+GGG | - | chr4.1:14217233-14217252 | None:intergenic | 35.0% |
| ! | GTTTTACCAAACACATGAGT+GGG | - | chr4.1:14217867-14217886 | None:intergenic | 35.0% |
| ! | TAGTTTTTGTATGGCTCATG+TGG | + | chr4.1:14216982-14217001 | MS.gene09296:intron | 35.0% |
| ! | TCATACTGATAGCACTTTTG+GGG | + | chr4.1:14216098-14216117 | MS.gene09296:intron | 35.0% |
| ! | TCTTGGCCTTCTAAAAATAG+GGG | - | chr4.1:14217232-14217251 | None:intergenic | 35.0% |
| ! | TGCAAAAGATTCTAAGGATG+AGG | + | chr4.1:14216257-14216276 | MS.gene09296:CDS | 35.0% |
| ! | TGTCTTGGCCTTCTAAAAAT+AGG | - | chr4.1:14217234-14217253 | None:intergenic | 35.0% |
| !! | GAATTTGCATTGACTTTGTC+TGG | + | chr4.1:14218089-14218108 | MS.gene09296:intron | 35.0% |
| !! | GGGTTTTAGCAATCAGAATT+AGG | + | chr4.1:14213960-14213979 | MS.gene09296:intron | 35.0% |
| !!! | GAATTCCCCCTATTTTTAGA+AGG | + | chr4.1:14217223-14217242 | MS.gene09296:CDS | 35.0% |
| !!! | GTATCACATGATTTTTGGTG+TGG | - | chr4.1:14216853-14216872 | None:intergenic | 35.0% |
| !!! | TGTAACTAGGAAGTTTTAGG+AGG | + | chr4.1:14215583-14215602 | MS.gene09296:intron | 35.0% |
| AAACTACCGGAGAGACTATT+AGG | + | chr4.1:14215041-14215060 | MS.gene09296:intron | 40.0% | |
| AAAGCTTCAGCATTGCTACA+AGG | - | chr4.1:14217327-14217346 | None:intergenic | 40.0% | |
| AACACACCCTTAGCTAAGAT+AGG | - | chr4.1:14217705-14217724 | None:intergenic | 40.0% | |
| AAGATTCCCACTCATGTGTT+TGG | + | chr4.1:14217858-14217877 | MS.gene09296:intron | 40.0% | |
| AAGATTTGTGTGTGTAGGAG+GGG | - | chr4.1:14215366-14215385 | None:intergenic | 40.0% | |
| AAGGATGAGGCAACAATACA+TGG | + | chr4.1:14216270-14216289 | MS.gene09296:CDS | 40.0% | |
| AAGGTTTCGTTTCTTCTCCT+TGG | - | chr4.1:14213910-14213929 | None:intergenic | 40.0% | |
| AATACGCGGGCTCATTAATT+AGG | - | chr4.1:14214053-14214072 | None:intergenic | 40.0% | |
| ACACACCCTTAGCTAAGATA+GGG | - | chr4.1:14217704-14217723 | None:intergenic | 40.0% | |
| AGGGTCATTGACATGTAACT+AGG | + | chr4.1:14215570-14215589 | MS.gene09296:intron | 40.0% | |
| ATACGCGGGCTCATTAATTA+GGG | - | chr4.1:14214052-14214071 | None:intergenic | 40.0% | |
| ATCTCATAGCCCACCTAATA+TGG | - | chr4.1:14215264-14215283 | None:intergenic | 40.0% | |
| ATGATGTTCGACTGATTGAC+TGG | + | chr4.1:14213826-14213845 | MS.gene09296:CDS | 40.0% | |
| ATTCCAAATCTCACATTCCC+TGG | + | chr4.1:14217966-14217985 | MS.gene09296:intron | 40.0% | |
| ATTCCAGGGAATGTGAGATT+TGG | - | chr4.1:14217972-14217991 | None:intergenic | 40.0% | |
| CAAGTCAGCCAACACAAATT+CGG | + | chr4.1:14214815-14214834 | MS.gene09296:intron | 40.0% | |
| CATCCTTATGAAAAGGAAGG+AGG | - | chr4.1:14215716-14215735 | None:intergenic | 40.0% | |
| CATGCAAGAAAGAGAACAAC+AGG | - | chr4.1:14215209-14215228 | None:intergenic | 40.0% | |
| CTTTGTGAATGTGAGGCTTT+GGG | + | chr4.1:14215667-14215686 | MS.gene09296:intron | 40.0% | |
| GAAACCTTCAGGTCAGTTTA+TGG | + | chr4.1:14214297-14214316 | MS.gene09296:intron | 40.0% | |
| GAACACAACAGCCCAATTTA+AGG | - | chr4.1:14216521-14216540 | None:intergenic | 40.0% | |
| GAGCTTGAAGCATATCCTTT+AGG | + | chr4.1:14216352-14216371 | MS.gene09296:CDS | 40.0% | |
| GATAGAGCTAACTTCTTCTG+AGG | + | chr4.1:14217159-14217178 | MS.gene09296:CDS | 40.0% | |
| GCTCAGTCATGTCTTACTTT+AGG | - | chr4.1:14216435-14216454 | None:intergenic | 40.0% | |
| GGGAAGTCCATAATATTCAC+TGG | + | chr4.1:14215943-14215962 | MS.gene09296:intron | 40.0% | |
| GTCAAAGATCCCTGATTAAC+TGG | - | chr4.1:14216641-14216660 | None:intergenic | 40.0% | |
| GTTAGGGTGTGTTTGTTTCA+AGG | - | chr4.1:14218006-14218025 | None:intergenic | 40.0% | |
| TACGGTGAAGAAACCAGTTA+GGG | - | chr4.1:14218022-14218041 | None:intergenic | 40.0% | |
| TAGAGGAACTTGCAAGTATG+AGG | - | chr4.1:14217083-14217102 | None:intergenic | 40.0% | |
| TAGGGGGAATTCTATATGCT+TGG | - | chr4.1:14217215-14217234 | None:intergenic | 40.0% | |
| TATCCTTTAGGTAGTTCAGC+AGG | + | chr4.1:14216364-14216383 | MS.gene09296:CDS | 40.0% | |
| TCAATCAGTCGAACATCATC+TGG | - | chr4.1:14213825-14213844 | None:intergenic | 40.0% | |
| TGAAACAAACACACCCTAAC+TGG | + | chr4.1:14218006-14218025 | MS.gene09296:intron | 40.0% | |
| TGATGTTCGACTGATTGACT+GGG | + | chr4.1:14213827-14213846 | MS.gene09296:CDS | 40.0% | |
| TGCCGTATTCTTACTAAGCA+AGG | + | chr4.1:14217270-14217289 | MS.gene09296:CDS | 40.0% | |
| TGTAACTAGCAGAAACCTTC+AGG | + | chr4.1:14214286-14214305 | MS.gene09296:CDS | 40.0% | |
| TTACCTGCTGAACTACCTAA+AGG | - | chr4.1:14216370-14216389 | None:intergenic | 40.0% | |
| TTAGGTAGTTCAGCAGGTAA+TGG | + | chr4.1:14216370-14216389 | MS.gene09296:intron | 40.0% | |
| TTATGAAAAGGAAGGAGGAC+AGG | - | chr4.1:14215711-14215730 | None:intergenic | 40.0% | |
| TTGTGTTTATATCCTTGCCC+AGG | + | chr4.1:14216596-14216615 | MS.gene09296:intron | 40.0% | |
| ! | AAAGGCTTGGTTGTTGTTGA+TGG | + | chr4.1:14215159-14215178 | MS.gene09296:intron | 40.0% |
| ! | ATCTGAGGTAAAGAAGGCAA+GGG | - | chr4.1:14216786-14216805 | None:intergenic | 40.0% |
| ! | CCATGTATTGGCCAATTTGA+GGG | + | chr4.1:14218353-14218372 | MS.gene09296:CDS | 40.0% |
| ! | CTTGGCCTTCTAAAAATAGG+GGG | - | chr4.1:14217231-14217250 | None:intergenic | 40.0% |
| ! | TAATGAGTTGGGCCGAAATA+TGG | + | chr4.1:14215078-14215097 | MS.gene09296:intron | 40.0% |
| ! | TATGTCTATACGTTCTAGGC+TGG | + | chr4.1:14214184-14214203 | MS.gene09296:CDS | 40.0% |
| ! | TGTCCTCCTTCCTTTTCATA+AGG | + | chr4.1:14215710-14215729 | MS.gene09296:intron | 40.0% |
| ! | TTAACTGGTTTATGTTCGGG+AGG | - | chr4.1:14216626-14216645 | None:intergenic | 40.0% |
| ! | TTTAGGAGGTGTGCTAATGA+TGG | + | chr4.1:14215597-14215616 | MS.gene09296:intron | 40.0% |
| ! | TTTTTGTATTTGCAGTGGCG+AGG | + | chr4.1:14216030-14216049 | MS.gene09296:intron | 40.0% |
| !! | AGAAGAAGTTAGCTCTATCG+AGG | - | chr4.1:14217158-14217177 | None:intergenic | 40.0% |
| !! | GAAGAAGTTAGCTCTATCGA+GGG | - | chr4.1:14217157-14217176 | None:intergenic | 40.0% |
| !! | GTGTTATTTGAGGTCAGAGA+GGG | + | chr4.1:14215551-14215570 | MS.gene09296:intron | 40.0% |
| !! | TAGGTGGGCTATGAGATAAT+CGG | + | chr4.1:14215267-14215286 | MS.gene09296:intron | 40.0% |
| !! | TGTGTTATTTGAGGTCAGAG+AGG | + | chr4.1:14215550-14215569 | MS.gene09296:intron | 40.0% |
| !! | TTCATTGGTGCCAAGAGTTT+GGG | + | chr4.1:14218324-14218343 | MS.gene09296:CDS | 40.0% |
| !! | TTTCATTGGTGCCAAGAGTT+TGG | + | chr4.1:14218323-14218342 | MS.gene09296:CDS | 40.0% |
| AAATTGGCCAATACATGGCG+TGG | - | chr4.1:14218351-14218370 | None:intergenic | 45.0% | |
| ACATCACACGACACTAAACC+CGG | - | chr4.1:14214468-14214487 | None:intergenic | 45.0% | |
| ACCCTTAGCTAAGATAGGGT+AGG | - | chr4.1:14217700-14217719 | None:intergenic | 45.0% | |
| AGCCTACCCTATCTTAGCTA+AGG | + | chr4.1:14217695-14217714 | MS.gene09296:intron | 45.0% | |
| CAACATGTCTGCAGTAGTCA+AGG | - | chr4.1:14216064-14216083 | None:intergenic | 45.0% | |
| CAGAAATCTGCTACAGCCTT+AGG | + | chr4.1:14216731-14216750 | MS.gene09296:CDS | 45.0% | |
| CAGGGATCTTTGACGATTCA+GGG | + | chr4.1:14216647-14216666 | MS.gene09296:CDS | 45.0% | |
| CCAAAGCCTCACATTCACAA+AGG | - | chr4.1:14215669-14215688 | None:intergenic | 45.0% | |
| CCCTCAAATTGGCCAATACA+TGG | - | chr4.1:14218356-14218375 | None:intergenic | 45.0% | |
| CCTTTGTGAATGTGAGGCTT+TGG | + | chr4.1:14215666-14215685 | MS.gene09296:intron | 45.0% | |
| CTACGGTGAAGAAACCAGTT+AGG | - | chr4.1:14218023-14218042 | None:intergenic | 45.0% | |
| CTGATTGCTAAAACCCTACC+TGG | - | chr4.1:14213956-14213975 | None:intergenic | 45.0% | |
| GCCTACCCTATCTTAGCTAA+GGG | + | chr4.1:14217696-14217715 | MS.gene09296:intron | 45.0% | |
| TCAGCCAACACAAATTCGGA+TGG | + | chr4.1:14214819-14214838 | MS.gene09296:intron | 45.0% | |
| TCAGGGATCTTTGACGATTC+AGG | + | chr4.1:14216646-14216665 | MS.gene09296:CDS | 45.0% | |
| TCGAACATCATCTGGATCAG+TGG | - | chr4.1:14213817-14213836 | None:intergenic | 45.0% | |
| TGTGAGCGACATTGGAATGT+TGG | + | chr4.1:14217943-14217962 | MS.gene09296:intron | 45.0% | |
| TTAATGAGCCCGCGTATTAG+CGG | + | chr4.1:14214055-14214074 | MS.gene09296:intron | 45.0% | |
| TTCGTTTCTTCTCCTTGGCT+TGG | - | chr4.1:14213905-14213924 | None:intergenic | 45.0% | |
| TTCTGCTCTTAACCAAGCCA+AGG | + | chr4.1:14213890-14213909 | MS.gene09296:CDS | 45.0% | |
| TTGGGCCGAAATATGGTGTA+TGG | + | chr4.1:14215085-14215104 | MS.gene09296:intron | 45.0% | |
| ! | AAGCCTTTTCCCACTAAGTG+GGG | - | chr4.1:14215147-14215166 | None:intergenic | 45.0% |
| ! | AAGCTGCTCTTGTTGTGTCT+TGG | - | chr4.1:14217249-14217268 | None:intergenic | 45.0% |
| ! | CAAGCCTTTTCCCACTAAGT+GGG | - | chr4.1:14215148-14215167 | None:intergenic | 45.0% |
| ! | GAGATCTTTTCACCGACAGT+CGG | + | chr4.1:14217404-14217423 | MS.gene09296:intron | 45.0% |
| ! | GATCTGAGGTAAAGAAGGCA+AGG | - | chr4.1:14216787-14216806 | None:intergenic | 45.0% |
| ! | GCCATGTATTGGCCAATTTG+AGG | + | chr4.1:14218352-14218371 | MS.gene09296:CDS | 45.0% |
| ! | GTCTCTCCGGTAGTTTTTCT+AGG | - | chr4.1:14215037-14215056 | None:intergenic | 45.0% |
| ! | TATACGTTCTAGGCTGGCTA+AGG | + | chr4.1:14214190-14214209 | MS.gene09296:CDS | 45.0% |
| !! | TGGTGCTTTGCAGTCACTTT+TGG | + | chr4.1:14214244-14214263 | MS.gene09296:CDS | 45.0% |
| !!! | TGCTTTGCAGTCACTTTTGG+TGG | + | chr4.1:14214247-14214266 | MS.gene09296:CDS | 45.0% |
| !!! | TTTGCAGTCACTTTTGGTGG+CGG | + | chr4.1:14214250-14214269 | MS.gene09296:CDS | 45.0% |
| AAGCAGGAGGAGCAACTTAG+TGG | + | chr4.1:14214224-14214243 | MS.gene09296:CDS | 50.0% | |
| AAGGGGAGTAGATCAGATGG+AGG | + | chr4.1:14214999-14215018 | MS.gene09296:intron | 50.0% | |
| AATCATCGCCCGCTAATACG+CGG | - | chr4.1:14214067-14214086 | None:intergenic | 50.0% | |
| ACTAAGTGGGGTCAGCTACA+TGG | - | chr4.1:14215135-14215154 | None:intergenic | 50.0% | |
| AGCAAGGGGAGTAGATCAGA+TGG | + | chr4.1:14214996-14215015 | MS.gene09296:intron | 50.0% | |
| ATGTAGCTGACCCCACTTAG+TGG | + | chr4.1:14215134-14215153 | MS.gene09296:intron | 50.0% | |
| CAAACTCGAGTCTCTCATCC+AGG | + | chr4.1:14213935-14213954 | MS.gene09296:CDS | 50.0% | |
| CATCACACGACACTAAACCC+GGG | - | chr4.1:14214467-14214486 | None:intergenic | 50.0% | |
| CATGTCTGCAGTAGTCAAGG+AGG | - | chr4.1:14216061-14216080 | None:intergenic | 50.0% | |
| CCACTTAGTGGGAAAAGGCT+TGG | + | chr4.1:14215146-14215165 | MS.gene09296:intron | 50.0% | |
| CCTCACATTCACAAAGGCTG+AGG | - | chr4.1:14215663-14215682 | None:intergenic | 50.0% | |
| CCTCAGCCTTTGTGAATGTG+AGG | + | chr4.1:14215660-14215679 | MS.gene09296:intron | 50.0% | |
| CGGGCTCATTAATTAGGGAC+AGG | - | chr4.1:14214047-14214066 | None:intergenic | 50.0% | |
| GAGACTCGAGTTTGTGCTGA+AGG | - | chr4.1:14213929-14213948 | None:intergenic | 50.0% | |
| GCTAAGACAGTGGCACTTCA+AGG | - | chr4.1:14218193-14218212 | None:intergenic | 50.0% | |
| TAAGGAGGATGCTGGTAAGC+AGG | + | chr4.1:14214208-14214227 | MS.gene09296:CDS | 50.0% | |
| TAATGAGCCCGCGTATTAGC+GGG | + | chr4.1:14214056-14214075 | MS.gene09296:intron | 50.0% | |
| TATCCCACTCGCTAAGACAG+TGG | - | chr4.1:14218203-14218222 | None:intergenic | 50.0% | |
| TCAAGCTCTTGCTCTTGTGC+TGG | - | chr4.1:14216340-14216359 | None:intergenic | 50.0% | |
| TCGAGTCTCTCATCCAGGTA+GGG | + | chr4.1:14213940-14213959 | MS.gene09296:intron | 50.0% | |
| TGACCCCACTTAGTGGGAAA+AGG | + | chr4.1:14215141-14215160 | MS.gene09296:intron | 50.0% | |
| TGAGGTAAAGAAGGCAAGGG+AGG | - | chr4.1:14216783-14216802 | None:intergenic | 50.0% | |
| TGTAGCTGACCCCACTTAGT+GGG | + | chr4.1:14215135-14215154 | MS.gene09296:intron | 50.0% | |
| TTAACCAACAAGCCCGTGCA+AGG | + | chr4.1:14217748-14217767 | MS.gene09296:intron | 50.0% | |
| TTCCTCTACGCTATCCCGTA+CGG | + | chr4.1:14217095-14217114 | MS.gene09296:CDS | 50.0% | |
| ! | ATGGTTCTGCCACTCTCTCT+TGG | + | chr4.1:14216486-14216505 | MS.gene09296:intron | 50.0% |
| ! | CCAAGCCTTTTCCCACTAAG+TGG | - | chr4.1:14215149-14215168 | None:intergenic | 50.0% |
| ! | TTTGGGACCACGCCATGTAT+TGG | + | chr4.1:14218341-14218360 | MS.gene09296:CDS | 50.0% |
| !!! | TTGCAGTCACTTTTGGTGGC+GGG | + | chr4.1:14214251-14214270 | MS.gene09296:CDS | 50.0% |
| AACCGTACGGGATAGCGTAG+AGG | - | chr4.1:14217100-14217119 | None:intergenic | 55.0% | |
| ATCATCGCCCGCTAATACGC+GGG | - | chr4.1:14214066-14214085 | None:intergenic | 55.0% | |
| ATGGCGTGGTCCCAAACTCT+TGG | - | chr4.1:14218337-14218356 | None:intergenic | 55.0% | |
| CTACGCTATCCCGTACGGTT+GGG | + | chr4.1:14217100-14217119 | MS.gene09296:CDS | 55.0% | |
| CTCGAGTCTCTCATCCAGGT+AGG | + | chr4.1:14213939-14213958 | MS.gene09296:intron | 55.0% | |
| GTATGGCTCATGTGGGACTG+TGG | + | chr4.1:14216990-14217009 | MS.gene09296:intron | 55.0% | |
| TCTACGCTATCCCGTACGGT+TGG | + | chr4.1:14217099-14217118 | MS.gene09296:CDS | 55.0% | |
| TGATAAAGGGGGCCGACTGT+CGG | - | chr4.1:14217419-14217438 | None:intergenic | 55.0% | |
| TGTGTGTAGGAGGGGAGACA+TGG | - | chr4.1:14215358-14215377 | None:intergenic | 55.0% | |
| ! | ACGTTCTAGGCTGGCTAAGG+AGG | + | chr4.1:14214193-14214212 | MS.gene09296:CDS | 55.0% |
| ! | AGTGCCACTGTCTTAGCGAG+TGG | + | chr4.1:14218196-14218215 | MS.gene09296:intron | 55.0% |
| ! | GTGCCACTGTCTTAGCGAGT+GGG | + | chr4.1:14218197-14218216 | MS.gene09296:intron | 55.0% |
| !! | ATGAGAGGCACCCAACCGTA+CGG | - | chr4.1:14217113-14217132 | None:intergenic | 55.0% |
| !! | TATGTTCGGGAGGAGTGCCT+GGG | - | chr4.1:14216616-14216635 | None:intergenic | 55.0% |
| !! | TTATGTTCGGGAGGAGTGCC+TGG | - | chr4.1:14216617-14216636 | None:intergenic | 55.0% |
| GGAGGATGCTGGTAAGCAGG+AGG | + | chr4.1:14214211-14214230 | MS.gene09296:CDS | 60.0% | |
| ! | AGGCTGGCTAAGGAGGATGC+TGG | + | chr4.1:14214200-14214219 | MS.gene09296:CDS | 60.0% |
| !! | TGAGAGGCACCCAACCGTAC+GGG | - | chr4.1:14217112-14217131 | None:intergenic | 60.0% |
| !!! | CAGTCACTTTTGGTGGCGGG+TGG | + | chr4.1:14214254-14214273 | MS.gene09296:CDS | 60.0% |
| TGCGCCTTGCACGGGCTTGT+TGG | - | chr4.1:14217755-14217774 | None:intergenic | 65.0% | |
| !! | TCGGGAGGAGTGCCTGGGCA+AGG | - | chr4.1:14216611-14216630 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 14213777 | 14218425 | 14213777 | ID=MS.gene09296 |
| chr4.1 | mRNA | 14213777 | 14218425 | 14213777 | ID=MS.gene09296.t1;Parent=MS.gene09296 |
| chr4.1 | exon | 14213777 | 14213956 | 14213777 | ID=MS.gene09296.t1.exon1;Parent=MS.gene09296.t1 |
| chr4.1 | CDS | 14213777 | 14213956 | 14213777 | ID=cds.MS.gene09296.t1;Parent=MS.gene09296.t1 |
| chr4.1 | exon | 14214101 | 14214307 | 14214101 | ID=MS.gene09296.t1.exon2;Parent=MS.gene09296.t1 |
| chr4.1 | CDS | 14214101 | 14214307 | 14214101 | ID=cds.MS.gene09296.t1;Parent=MS.gene09296.t1 |
| chr4.1 | exon | 14216205 | 14216385 | 14216205 | ID=MS.gene09296.t1.exon3;Parent=MS.gene09296.t1 |
| chr4.1 | CDS | 14216205 | 14216385 | 14216205 | ID=cds.MS.gene09296.t1;Parent=MS.gene09296.t1 |
| chr4.1 | exon | 14216618 | 14216766 | 14216618 | ID=MS.gene09296.t1.exon4;Parent=MS.gene09296.t1 |
| chr4.1 | CDS | 14216618 | 14216766 | 14216618 | ID=cds.MS.gene09296.t1;Parent=MS.gene09296.t1 |
| chr4.1 | exon | 14217064 | 14217291 | 14217064 | ID=MS.gene09296.t1.exon5;Parent=MS.gene09296.t1 |
| chr4.1 | CDS | 14217064 | 14217291 | 14217064 | ID=cds.MS.gene09296.t1;Parent=MS.gene09296.t1 |
| chr4.1 | exon | 14218303 | 14218425 | 14218303 | ID=MS.gene09296.t1.exon6;Parent=MS.gene09296.t1 |
| chr4.1 | CDS | 14218303 | 14218425 | 14218303 | ID=cds.MS.gene09296.t1;Parent=MS.gene09296.t1 |
| Gene Sequence |
| Protein sequence |
