Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09573.t1 | XP_003611626.2 | 98.9 | 530 | 6 | 0 | 1 | 530 | 1 | 530 | 0.00E+00 | 1079.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09573.t1 | Q9SZV0 | 77.8 | 522 | 114 | 2 | 10 | 530 | 17 | 537 | 1.6e-243 | 843.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09573.t1 | G7K3W4 | 98.9 | 530 | 6 | 0 | 1 | 530 | 1 | 530 | 0.0e+00 | 1079.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049297 | MS.gene09573 | 0.838067 | 3.58E-57 | -1.69E-46 |
| MS.gene050099 | MS.gene09573 | 0.829815 | 4.17E-55 | -1.69E-46 |
| MS.gene051171 | MS.gene09573 | 0.811177 | 7.98E-51 | -1.69E-46 |
| MS.gene052600 | MS.gene09573 | 0.82282 | 1.93E-53 | -1.69E-46 |
| MS.gene054701 | MS.gene09573 | 0.805263 | 1.45E-49 | -1.69E-46 |
| MS.gene054942 | MS.gene09573 | 0.811288 | 7.55E-51 | -1.69E-46 |
| MS.gene055428 | MS.gene09573 | 0.816107 | 6.56E-52 | -1.69E-46 |
| MS.gene055971 | MS.gene09573 | 0.844063 | 9.53E-59 | -1.69E-46 |
| MS.gene057121 | MS.gene09573 | 0.845567 | 3.75E-59 | -1.69E-46 |
| MS.gene058002 | MS.gene09573 | 0.809975 | 1.45E-50 | -1.69E-46 |
| MS.gene058142 | MS.gene09573 | 0.826069 | 3.32E-54 | -1.69E-46 |
| MS.gene058276 | MS.gene09573 | 0.818753 | 1.66E-52 | -1.69E-46 |
| MS.gene058833 | MS.gene09573 | 0.82883 | 7.23E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09573.t1 | MTR_5g016070 | 98.868 | 530 | 6 | 0 | 1 | 530 | 1 | 530 | 0.0 | 1079 |
| MS.gene09573.t1 | MTR_4g095410 | 72.134 | 506 | 129 | 5 | 26 | 528 | 23 | 519 | 0.0 | 761 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09573.t1 | AT4G37510 | 79.719 | 498 | 99 | 2 | 34 | 530 | 41 | 537 | 0.0 | 833 |
| MS.gene09573.t1 | AT2G48121 | 75.325 | 77 | 19 | 0 | 454 | 530 | 1 | 77 | 4.33e-34 | 124 |
| MS.gene09573.t1 | AT2G48121 | 75.000 | 56 | 14 | 0 | 475 | 530 | 20 | 75 | 6.39e-22 | 90.1 |
Find 110 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTATCGTAGGTCGGTATTT+TGG | 0.109591 | 5.2:+7710767 | MS.gene09573:intron |
| GTTTGATACTTTGTTGTATT+TGG | 0.144675 | 5.2:+7709599 | MS.gene09573:CDS |
| GGACTCTCATATCTTGTTTA+TGG | 0.145537 | 5.2:+7713430 | MS.gene09573:CDS |
| AATGAGAAGTTAGTTGGTTT+TGG | 0.179441 | 5.2:-7709150 | None:intergenic |
| GCAAGATATTGTTGCTTATA+AGG | 0.188751 | 5.2:+7710957 | MS.gene09573:CDS |
| CCGATGAGGGAGAGAGTTTA+TGG | 0.193361 | 5.2:+7709765 | MS.gene09573:CDS |
| TTCCTGGCTTCGGTAATTTC+TGG | 0.213137 | 5.2:-7711369 | None:intergenic |
| GATATTTCCGTATGATAATA+TGG | 0.253902 | 5.2:+7709845 | MS.gene09573:CDS |
| TCTCATATTTAGACCTCTTT+AGG | 0.265901 | 5.2:-7713508 | None:intergenic |
| GGGGCAATCTATCTTTGTTT+TGG | 0.268972 | 5.2:+7710799 | MS.gene09573:CDS |
| TTAACAATGCCGATAAATTA+TGG | 0.272123 | 5.2:+7709487 | MS.gene09573:CDS |
| CGTTGAGGATTGTTATTTCT+AGG | 0.287707 | 5.2:-7709282 | None:intergenic |
| GACTCTCATATCTTGTTTAT+GGG | 0.294493 | 5.2:+7713431 | MS.gene09573:CDS |
| AAGAGGGTAGTTTCGGGATT+TGG | 0.302484 | 5.2:-7709220 | None:intergenic |
| ATCGATTCAGAGGAAATATA+TGG | 0.308151 | 5.2:+7711280 | MS.gene09573:CDS |
| GATGAGAATGAGAAGTTAGT+TGG | 0.309923 | 5.2:-7709156 | None:intergenic |
| ATGTTAGGTCTGGGCATTCT+AGG | 0.312555 | 5.2:+7709661 | MS.gene09573:CDS |
| AAAAGAACACGGTAGACTTC+TGG | 0.315797 | 5.2:-7710826 | None:intergenic |
| ATTCTGTCTGTCATTTCTAA+TGG | 0.317291 | 5.2:-7711345 | None:intergenic |
| GGTAGACAAGAACTTAATAA+TGG | 0.332729 | 5.2:-7709453 | None:intergenic |
| GAGAGAGTTTATGGGTTGAT+TGG | 0.340372 | 5.2:+7709774 | MS.gene09573:CDS |
| TGATTAACAGCTGTTGTGGC+TGG | 0.347745 | 5.2:-7713397 | None:intergenic |
| CTCATCTATCCATAATTTAT+CGG | 0.347797 | 5.2:-7709496 | None:intergenic |
| TGCTCAAATTTGTACTTTGA+TGG | 0.350401 | 5.2:-7712141 | None:intergenic |
| GAACGTGAAGAGGGTAGTTT+CGG | 0.375377 | 5.2:-7709227 | None:intergenic |
| AGTTTGAAAACAAGCTAAAC+TGG | 0.389097 | 5.2:+7710935 | MS.gene09573:CDS |
| AGAGCTTGGACTTGGATTGC+AGG | 0.389569 | 5.2:+7711395 | MS.gene09573:CDS |
| ATAATTTATCGGCATTGTTA+AGG | 0.390095 | 5.2:-7709485 | None:intergenic |
| AAGTCCAAGCTCTATGTTCC+TGG | 0.390461 | 5.2:-7711385 | None:intergenic |
| GGCTGGCAATCCTCATCATC+TGG | 0.399583 | 5.2:-7710868 | None:intergenic |
| AAGCTCTATGTTCCTGGCTT+CGG | 0.400967 | 5.2:-7711379 | None:intergenic |
| GAACAAAGACGAAGCATGTT+AGG | 0.401968 | 5.2:+7709646 | MS.gene09573:CDS |
| ATCCAAGTGCTCTCATAACT+TGG | 0.404958 | 5.2:-7711320 | None:intergenic |
| AATAAAACGGTGAAGCTGTT+TGG | 0.409551 | 5.2:-7713320 | None:intergenic |
| AACGTGAAGAGGGTAGTTTC+GGG | 0.413908 | 5.2:-7709226 | None:intergenic |
| CAACAAAGTATCAAACTGTT+TGG | 0.422950 | 5.2:-7709592 | None:intergenic |
| AGGGCAATATGTGCTGGAAT+TGG | 0.425669 | 5.2:+7709695 | MS.gene09573:CDS |
| TGGCTGGGTTTCTCCGTCTC+CGG | 0.431775 | 5.2:-7713381 | None:intergenic |
| AAGACGAAGCATGTTAGGTC+TGG | 0.432221 | 5.2:+7709651 | MS.gene09573:CDS |
| AGGAACATAGAGCTTGGACT+TGG | 0.433949 | 5.2:+7711387 | MS.gene09573:CDS |
| ATTTAGATGCTCCTGGGTTG+TGG | 0.437257 | 5.2:+7713239 | MS.gene09573:CDS |
| ATGAAGCATTTAGATGCTCC+TGG | 0.439342 | 5.2:+7713232 | MS.gene09573:CDS |
| AGAGAGTTTATGGGTTGATT+GGG | 0.442300 | 5.2:+7709775 | MS.gene09573:CDS |
| TGAACCATCAGACACATTAG+AGG | 0.448502 | 5.2:+7709557 | MS.gene09573:CDS |
| GTAGACAAGAACTTAATAAT+GGG | 0.452131 | 5.2:-7709452 | None:intergenic |
| TTTCTTAGGGCAATATGTGC+TGG | 0.453869 | 5.2:+7709689 | MS.gene09573:CDS |
| CCCCAAGTTATGAGAGCACT+TGG | 0.454535 | 5.2:+7711318 | MS.gene09573:CDS |
| AAACTGCTTATGAGCGCAAC+CGG | 0.454936 | 5.2:+7713362 | MS.gene09573:CDS |
| GTTGTTTGCGCTCCCTAGGC+TGG | 0.460379 | 5.2:-7710885 | None:intergenic |
| TCAAGTTGTTTGCGCTCCCT+AGG | 0.462470 | 5.2:-7710889 | None:intergenic |
| GGAAGGAGAATTTGCCTAAG+TGG | 0.464839 | 5.2:+7709796 | MS.gene09573:CDS |
| AAAGTATCAAACTGTTTGGC+AGG | 0.468742 | 5.2:-7709588 | None:intergenic |
| CCTCTGAATCGATGCATGCC+AGG | 0.470072 | 5.2:-7711270 | None:intergenic |
| TTTGAGAGATTAGAATATGT+TGG | 0.474238 | 5.2:+7712177 | MS.gene09573:CDS |
| GATTAACAGCTGTTGTGGCT+GGG | 0.475840 | 5.2:-7713396 | None:intergenic |
| CGATGAGGGAGAGAGTTTAT+GGG | 0.478368 | 5.2:+7709766 | MS.gene09573:CDS |
| AAAATTAGAACTTACTTGAC+AGG | 0.483319 | 5.2:-7709897 | None:intergenic |
| TCCAAGTGCTCTCATAACTT+GGG | 0.485073 | 5.2:-7711319 | None:intergenic |
| TTGGATGGGGAAAGGAGAGA+AGG | 0.485624 | 5.2:-7709181 | None:intergenic |
| TGAGCAGATTCAGCCTAAAG+AGG | 0.487808 | 5.2:+7713495 | MS.gene09573:CDS |
| GATGGGGAAAGGAGAGAAGG+AGG | 0.489046 | 5.2:-7709178 | None:intergenic |
| GTTGAGGATTGTTATTTCTA+GGG | 0.500027 | 5.2:-7709281 | None:intergenic |
| ATTAAGATTTGGATGGGGAA+AGG | 0.504291 | 5.2:-7709189 | None:intergenic |
| CTCGAAGCGAAACAAGCGCT+TGG | 0.509306 | 5.2:+7709525 | MS.gene09573:CDS |
| TATCATCATATATAATAAAA+CGG | 0.517957 | 5.2:-7713333 | None:intergenic |
| AGTTTATGGGTTGATTGGGA+AGG | 0.522441 | 5.2:+7709779 | MS.gene09573:CDS |
| GTCTTTGTTCTCTCACACGA+AGG | 0.525988 | 5.2:-7709633 | None:intergenic |
| GCTGTTAATCAAGCTATTCA+CGG | 0.527856 | 5.2:+7713409 | MS.gene09573:CDS |
| TATGGATAAGATTGTGAGGA+GGG | 0.528274 | 5.2:+7709863 | MS.gene09573:CDS |
| AGACGAAGCATGTTAGGTCT+GGG | 0.530011 | 5.2:+7709652 | MS.gene09573:CDS |
| CTCTGAATCGATGCATGCCA+GGG | 0.532007 | 5.2:-7711269 | None:intergenic |
| ACACATGCTCTAAACAGCCT+TGG | 0.533681 | 5.2:-7711243 | None:intergenic |
| TTCCAGAAATTACCGAAGCC+AGG | 0.536155 | 5.2:+7711367 | MS.gene09573:CDS |
| ATCTTATCCATATTATCATA+CGG | 0.538399 | 5.2:-7709852 | None:intergenic |
| TCGATTCAGAGGAAATATAT+GGG | 0.538733 | 5.2:+7711281 | MS.gene09573:CDS |
| ACTCTCTCCCTCATCGGACC+AGG | 0.543075 | 5.2:-7709759 | None:intergenic |
| ATGATGAGGATTGCCAGCCT+AGG | 0.543609 | 5.2:+7710872 | MS.gene09573:CDS |
| AGCTTGATTAACAGCTGTTG+TGG | 0.551231 | 5.2:-7713401 | None:intergenic |
| TGATGAGGATTGCCAGCCTA+GGG | 0.552339 | 5.2:+7710873 | MS.gene09573:CDS |
| TTTAGAATGTAACGTCTTGG+TGG | 0.553258 | 5.2:-7709360 | None:intergenic |
| CTTATGAGCGCAACCGGAGA+CGG | 0.553538 | 5.2:+7713368 | MS.gene09573:CDS |
| TGAGTAAACAGAGCATCTGC+AGG | 0.557301 | 5.2:-7711219 | None:intergenic |
| ATCGGACCAGGCAATTCCCT+CGG | 0.558254 | 5.2:-7709747 | None:intergenic |
| CCATAAACTCTCTCCCTCAT+CGG | 0.567145 | 5.2:-7709765 | None:intergenic |
| TTCTCTTGCAGCCACAACCC+AGG | 0.573873 | 5.2:-7713250 | None:intergenic |
| ATATGTGCTGGAATTGGCAT+TGG | 0.575967 | 5.2:+7709701 | MS.gene09573:CDS |
| GAAGCCAGGAACATAGAGCT+TGG | 0.576371 | 5.2:+7711381 | MS.gene09573:CDS |
| CCTGGCATGCATCGATTCAG+AGG | 0.580371 | 5.2:+7711270 | MS.gene09573:CDS |
| ATGCTCTGTTTACTCATCCA+AGG | 0.580822 | 5.2:+7711226 | MS.gene09573:CDS |
| GGAATTGCCTGGTCCGATGA+GGG | 0.585185 | 5.2:+7709752 | MS.gene09573:CDS |
| CGGAATGGATCCAGATGATG+AGG | 0.590285 | 5.2:+7710858 | MS.gene09573:CDS |
| GCGCAAACAACTTGAAGATG+TGG | 0.590741 | 5.2:+7710897 | MS.gene09573:CDS |
| TGAAGCATTTAGATGCTCCT+GGG | 0.592431 | 5.2:+7713233 | MS.gene09573:CDS |
| TCATCCTCTAATGTGTCTGA+TGG | 0.595112 | 5.2:-7709561 | None:intergenic |
| AGGTATCCGAGGGAATTGCC+TGG | 0.610907 | 5.2:+7709741 | MS.gene09573:CDS |
| CCAAGTGCTCTCATAACTTG+GGG | 0.611381 | 5.2:-7711318 | None:intergenic |
| CTCACACGAAGGATGCTGAA+AGG | 0.613808 | 5.2:-7709622 | None:intergenic |
| ATATGGATAAGATTGTGAGG+AGG | 0.618424 | 5.2:+7709862 | MS.gene09573:CDS |
| GCAACTGCGAGAACGTGAAG+AGG | 0.627154 | 5.2:-7709237 | None:intergenic |
| GGGAATTGCCTGGTCCGATG+AGG | 0.628852 | 5.2:+7709751 | MS.gene09573:CDS |
| CAACTGCGAGAACGTGAAGA+GGG | 0.631595 | 5.2:-7709236 | None:intergenic |
| GCATTGTTAAGGCGCGACGA+AGG | 0.641980 | 5.2:-7709474 | None:intergenic |
| GTAAACAGAGCATCTGCAGG+AGG | 0.645297 | 5.2:-7711216 | None:intergenic |
| ATAATATGGATAAGATTGTG+AGG | 0.645777 | 5.2:+7709859 | MS.gene09573:CDS |
| CTAGCAGCTTTAATCCACTT+AGG | 0.646479 | 5.2:-7709810 | None:intergenic |
| ATTGTGAGGAGGGATAGAGA+AGG | 0.649063 | 5.2:+7709873 | MS.gene09573:CDS |
| AATCTCTCAAAGCAAAATCG+AGG | 0.653019 | 5.2:-7712165 | None:intergenic |
| TCTGAATCGATGCATGCCAG+GGG | 0.656480 | 5.2:-7711268 | None:intergenic |
| AGTTCTTTAAGAAGTCGTTG+AGG | 0.689037 | 5.2:-7709297 | None:intergenic |
| CTGAATCGATGCATGCCAGG+GGG | 0.708978 | 5.2:-7711267 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATGTTAATATTTGTAT+TGG | + | chr5.2:7710323-7710342 | MS.gene09573:intron | 10.0% |
| !! | TATCATCATATATAATAAAA+CGG | - | chr5.2:7713336-7713355 | None:intergenic | 10.0% |
| !!! | TGTATTAATAGTTTAAAATT+AGG | + | chr5.2:7711904-7711923 | MS.gene09573:intron | 10.0% |
| !!! | TTTTTATTTTCTTTAGGATT+TGG | + | chr5.2:7713189-7713208 | MS.gene09573:intron | 15.0% |
| !! | AAAGAATACAACAGATATAA+AGG | - | chr5.2:7710497-7710516 | None:intergenic | 20.0% |
| !! | ATCTTATCCATATTATCATA+CGG | - | chr5.2:7709855-7709874 | None:intergenic | 20.0% |
| !! | ATTGCGTAATTTATTTGATA+GGG | + | chr5.2:7710126-7710145 | MS.gene09573:intron | 20.0% |
| !! | GTTATAGTGATATAAACTAT+AGG | + | chr5.2:7710443-7710462 | MS.gene09573:intron | 20.0% |
| !! | TGATATTCATTTGCATAATA+TGG | + | chr5.2:7710272-7710291 | MS.gene09573:intron | 20.0% |
| !! | TTCACATAATGAATGATATT+TGG | + | chr5.2:7710347-7710366 | MS.gene09573:intron | 20.0% |
| !!! | ACAACGTTTTTATTTTCTTT+AGG | + | chr5.2:7713183-7713202 | MS.gene09573:intron | 20.0% |
| !!! | ACAAGTTTACTTCTAAAAAA+AGG | - | chr5.2:7712003-7712022 | None:intergenic | 20.0% |
| !!! | CAAGTTTACTTCTAAAAAAA+GGG | - | chr5.2:7712002-7712021 | None:intergenic | 20.0% |
| !!! | CTGTTGTATTCTTTTTTTTT+TGG | + | chr5.2:7710503-7710522 | MS.gene09573:intron | 20.0% |
| !!! | TCAATCAAATTTTACTATGT+AGG | + | chr5.2:7710042-7710061 | MS.gene09573:intron | 20.0% |
| !!! | TTTTTGATTAAGATTTGGAT+GGG | - | chr5.2:7709198-7709217 | None:intergenic | 20.0% |
| ! | AAAAAAGATGATGCTAACAA+GGG | + | chr5.2:7712919-7712938 | MS.gene09573:intron | 25.0% |
| ! | AAAATTAGAACTTACTTGAC+AGG | - | chr5.2:7709900-7709919 | None:intergenic | 25.0% |
| ! | AAATGTGAAAGTAGAATGAA+AGG | - | chr5.2:7711435-7711454 | None:intergenic | 25.0% |
| ! | AATATAGAACATTCGATTGT+AGG | - | chr5.2:7711162-7711181 | None:intergenic | 25.0% |
| ! | AATTGTTTGAAAGTTACTGA+AGG | + | chr5.2:7712728-7712747 | MS.gene09573:intron | 25.0% |
| ! | ACAAATTGATTAACAGCATA+TGG | - | chr5.2:7710660-7710679 | None:intergenic | 25.0% |
| ! | AGTAAAATTTGATTGAACGA+CGG | - | chr5.2:7710038-7710057 | None:intergenic | 25.0% |
| ! | ATAATATGGATAAGATTGTG+AGG | + | chr5.2:7709859-7709878 | MS.gene09573:CDS | 25.0% |
| ! | ATAATTTATCGGCATTGTTA+AGG | - | chr5.2:7709488-7709507 | None:intergenic | 25.0% |
| ! | ATCTTGAATAGAAAAAAGTG+AGG | + | chr5.2:7712339-7712358 | MS.gene09573:intron | 25.0% |
| ! | ATTTACATAAACAGCTAAAC+CGG | - | chr5.2:7711758-7711777 | None:intergenic | 25.0% |
| ! | CAAATTGATTAACAGCATAT+GGG | - | chr5.2:7710659-7710678 | None:intergenic | 25.0% |
| ! | CATTGCGTAATTTATTTGAT+AGG | + | chr5.2:7710125-7710144 | MS.gene09573:intron | 25.0% |
| ! | CTCATCTATCCATAATTTAT+CGG | - | chr5.2:7709499-7709518 | None:intergenic | 25.0% |
| ! | GAAGACTCTAATTTCATTAA+TGG | + | chr5.2:7712245-7712264 | MS.gene09573:intron | 25.0% |
| ! | GATATTTCCGTATGATAATA+TGG | + | chr5.2:7709845-7709864 | MS.gene09573:CDS | 25.0% |
| ! | GTAGACAAGAACTTAATAAT+GGG | - | chr5.2:7709455-7709474 | None:intergenic | 25.0% |
| ! | GTTTATATCACTATAACTCA+TGG | - | chr5.2:7710440-7710459 | None:intergenic | 25.0% |
| ! | TTAACAATGCCGATAAATTA+TGG | + | chr5.2:7709487-7709506 | MS.gene09573:CDS | 25.0% |
| ! | TTATCGCATTTCTGATAATA+GGG | - | chr5.2:7712295-7712314 | None:intergenic | 25.0% |
| ! | TTCTATTTATTATCCTTCTC+AGG | + | chr5.2:7711559-7711578 | MS.gene09573:intron | 25.0% |
| ! | TTTATCGCATTTCTGATAAT+AGG | - | chr5.2:7712296-7712315 | None:intergenic | 25.0% |
| ! | TTTGAGAGATTAGAATATGT+TGG | + | chr5.2:7712177-7712196 | MS.gene09573:CDS | 25.0% |
| !! | ATATGTTTAGTGATAGTGAT+TGG | + | chr5.2:7711603-7711622 | MS.gene09573:intron | 25.0% |
| !! | ATTCTTCTGAACAAATTTTG+TGG | + | chr5.2:7713283-7713302 | MS.gene09573:CDS | 25.0% |
| !! | CAAATTTTTGTGTTGAATTC+AGG | + | chr5.2:7711693-7711712 | MS.gene09573:intron | 25.0% |
| !! | CATTATTCTGAAAAATAGCT+TGG | + | chr5.2:7712404-7712423 | MS.gene09573:intron | 25.0% |
| !! | GTTTGATACTTTGTTGTATT+TGG | + | chr5.2:7709599-7709618 | MS.gene09573:CDS | 25.0% |
| !!! | AAATTTGAAAGTATCACTGT+AGG | - | chr5.2:7711680-7711699 | None:intergenic | 25.0% |
| !!! | AATTTTTCACATCTAAGATC+AGG | - | chr5.2:7712524-7712543 | None:intergenic | 25.0% |
| !!! | ATTCACTTTTCTATTGAAGT+GGG | + | chr5.2:7712036-7712055 | MS.gene09573:intron | 25.0% |
| !!! | ATTCTAGGTTGTTTTTCTTA+GGG | + | chr5.2:7709676-7709695 | MS.gene09573:CDS | 25.0% |
| !!! | ATTTTTCACATCTAAGATCA+GGG | - | chr5.2:7712523-7712542 | None:intergenic | 25.0% |
| !!! | GTTTTTGATTAAGATTTGGA+TGG | - | chr5.2:7709199-7709218 | None:intergenic | 25.0% |
| !!! | TATTCACTTTTCTATTGAAG+TGG | + | chr5.2:7712035-7712054 | MS.gene09573:intron | 25.0% |
| !!! | TGAATTGATTTGTTAGGATA+AGG | + | chr5.2:7710202-7710221 | MS.gene09573:intron | 25.0% |
| !!! | TGGTGTTTTTGATTAAGATT+TGG | - | chr5.2:7709203-7709222 | None:intergenic | 25.0% |
| !!! | TTCATGGAAGCTTTTTTTTT+TGG | - | chr5.2:7712563-7712582 | None:intergenic | 25.0% |
| !!! | TTCTGAAATATAAACAAGAG+AGG | + | chr5.2:7712817-7712836 | MS.gene09573:intron | 25.0% |
| !!! | TTTTGATTAAGATTTGGATG+GGG | - | chr5.2:7709197-7709216 | None:intergenic | 25.0% |
| AAAAAGATGATGCTAACAAG+GGG | + | chr5.2:7712920-7712939 | MS.gene09573:intron | 30.0% | |
| ACCAACTCAATCATATAAGA+TGG | - | chr5.2:7710690-7710709 | None:intergenic | 30.0% | |
| ACCATCTTATATGATTGAGT+TGG | + | chr5.2:7710686-7710705 | MS.gene09573:intron | 30.0% | |
| AGTTTGAAAACAAGCTAAAC+TGG | + | chr5.2:7710935-7710954 | MS.gene09573:CDS | 30.0% | |
| ATATGTTGGAAAAACGATAC+AGG | + | chr5.2:7712191-7712210 | MS.gene09573:CDS | 30.0% | |
| ATTTCTGATAATAGGGAAAG+GGG | - | chr5.2:7712288-7712307 | None:intergenic | 30.0% | |
| CAAAAAAGATGATGCTAACA+AGG | + | chr5.2:7712918-7712937 | MS.gene09573:intron | 30.0% | |
| CAAAATCACAGACACATATT+AGG | - | chr5.2:7712889-7712908 | None:intergenic | 30.0% | |
| CAATCGAATGTTCTATATTG+AGG | + | chr5.2:7711163-7711182 | MS.gene09573:intron | 30.0% | |
| CATTTCTGATAATAGGGAAA+GGG | - | chr5.2:7712289-7712308 | None:intergenic | 30.0% | |
| CCTAACAAATCAATTCAGTT+TGG | - | chr5.2:7710199-7710218 | None:intergenic | 30.0% | |
| GAAAAACCTAAGAGAAAGAT+GGG | + | chr5.2:7712580-7712599 | MS.gene09573:intron | 30.0% | |
| GAAATATAAACAAGAGAGGT+GGG | + | chr5.2:7712821-7712840 | MS.gene09573:intron | 30.0% | |
| GGATAAAAATAGATTGCAAC+AGG | + | chr5.2:7712425-7712444 | MS.gene09573:intron | 30.0% | |
| GGTAGACAAGAACTTAATAA+TGG | - | chr5.2:7709456-7709475 | None:intergenic | 30.0% | |
| GGTTTAGCTGTTTATGTAAA+TGG | + | chr5.2:7711757-7711776 | MS.gene09573:intron | 30.0% | |
| TCGATTCAGAGGAAATATAT+GGG | + | chr5.2:7711281-7711300 | MS.gene09573:CDS | 30.0% | |
| TGAAAAACCTAAGAGAAAGA+TGG | + | chr5.2:7712579-7712598 | MS.gene09573:intron | 30.0% | |
| TGAAATATAAACAAGAGAGG+TGG | + | chr5.2:7712820-7712839 | MS.gene09573:intron | 30.0% | |
| TGAGAAGAATATAGCTAACT+CGG | - | chr5.2:7710105-7710124 | None:intergenic | 30.0% | |
| TGCTCAAATTTGTACTTTGA+TGG | - | chr5.2:7712144-7712163 | None:intergenic | 30.0% | |
| TTAGTTAGATATCATGTGAC+CGG | + | chr5.2:7710149-7710168 | MS.gene09573:intron | 30.0% | |
| TTTACATAAACAGCTAAACC+GGG | - | chr5.2:7711757-7711776 | None:intergenic | 30.0% | |
| ! | AATTTTGTGGAAGATACTTG+AGG | + | chr5.2:7713296-7713315 | MS.gene09573:CDS | 30.0% |
| ! | ATCGATTCAGAGGAAATATA+TGG | + | chr5.2:7711280-7711299 | MS.gene09573:CDS | 30.0% |
| ! | ATTCTGTCTGTCATTTCTAA+TGG | - | chr5.2:7711348-7711367 | None:intergenic | 30.0% |
| ! | ATTTTGTGGAAGATACTTGA+GGG | + | chr5.2:7713297-7713316 | MS.gene09573:CDS | 30.0% |
| ! | CAACAAAGTATCAAACTGTT+TGG | - | chr5.2:7709595-7709614 | None:intergenic | 30.0% |
| ! | CATAAACTTAAAAGTGCACA+AGG | - | chr5.2:7710381-7710400 | None:intergenic | 30.0% |
| ! | GACTCTCATATCTTGTTTAT+GGG | + | chr5.2:7713431-7713450 | MS.gene09573:CDS | 30.0% |
| ! | GCAAGATATTGTTGCTTATA+AGG | + | chr5.2:7710957-7710976 | MS.gene09573:CDS | 30.0% |
| ! | GTTTATGTAATTTTCTCACC+TGG | + | chr5.2:7711779-7711798 | MS.gene09573:intron | 30.0% |
| ! | TCTTTCTCTTAGGTTTTTCA+TGG | - | chr5.2:7712579-7712598 | None:intergenic | 30.0% |
| ! | TTTGTTGCTATCTCATTTTC+AGG | + | chr5.2:7710535-7710554 | MS.gene09573:intron | 30.0% |
| !! | AATGAGAAGTTAGTTGGTTT+TGG | - | chr5.2:7709153-7709172 | None:intergenic | 30.0% |
| !! | AATGATTTTAGTGAAAGCTG+TGG | - | chr5.2:7709432-7709451 | None:intergenic | 30.0% |
| !! | CACATTTGTTATTCTATCGT+AGG | + | chr5.2:7710755-7710774 | MS.gene09573:intron | 30.0% |
| !! | CCAAACTGAATTGATTTGTT+AGG | + | chr5.2:7710196-7710215 | MS.gene09573:intron | 30.0% |
| !! | GTTGAGGATTGTTATTTCTA+GGG | - | chr5.2:7709284-7709303 | None:intergenic | 30.0% |
| !! | TTTGTTATTCTATCGTAGGT+CGG | + | chr5.2:7710759-7710778 | MS.gene09573:intron | 30.0% |
| !!! | ATGAGAAGTTAGTTGGTTTT+GGG | - | chr5.2:7709152-7709171 | None:intergenic | 30.0% |
| !!! | CATTCTAGGTTGTTTTTCTT+AGG | + | chr5.2:7709675-7709694 | MS.gene09573:CDS | 30.0% |
| !!! | TTGACAATTCTGTTTTTACC+CGG | + | chr5.2:7711736-7711755 | MS.gene09573:intron | 30.0% |
| !!! | TTGGTGGTGATTTTGATTTT+GGG | - | chr5.2:7709347-7709366 | None:intergenic | 30.0% |
| !!! | TTTTCTTTAGGATTTGGTGA+TGG | + | chr5.2:7713195-7713214 | MS.gene09573:intron | 30.0% |
| AAACTTGTCTAGTGCATATG+CGG | + | chr5.2:7711955-7711974 | MS.gene09573:intron | 35.0% | |
| AATAAAACGGTGAAGCTGTT+TGG | - | chr5.2:7713323-7713342 | None:intergenic | 35.0% | |
| AATAGCTGCAGTACAATTAC+GGG | + | chr5.2:7712671-7712690 | MS.gene09573:intron | 35.0% | |
| AATCTCTCAAAGCAAAATCG+AGG | - | chr5.2:7712168-7712187 | None:intergenic | 35.0% | |
| ATATGGATAAGATTGTGAGG+AGG | + | chr5.2:7709862-7709881 | MS.gene09573:CDS | 35.0% | |
| ATTAAGATTTGGATGGGGAA+AGG | - | chr5.2:7709192-7709211 | None:intergenic | 35.0% | |
| CGAACACTTCAAAAAGAACA+CGG | - | chr5.2:7710840-7710859 | None:intergenic | 35.0% | |
| CGGAATTTCCACTTAGATAT+GGG | + | chr5.2:7712615-7712634 | MS.gene09573:intron | 35.0% | |
| GAATAGAAAAAAGTGAGGTG+AGG | + | chr5.2:7712344-7712363 | MS.gene09573:intron | 35.0% | |
| GAATAGCTGCAGTACAATTA+CGG | + | chr5.2:7712670-7712689 | MS.gene09573:intron | 35.0% | |
| GACATCAAATGATCATAGAC+CGG | - | chr5.2:7710171-7710190 | None:intergenic | 35.0% | |
| GATGAGAATGAGAAGTTAGT+TGG | - | chr5.2:7709159-7709178 | None:intergenic | 35.0% | |
| GCATTTCTGATAATAGGGAA+AGG | - | chr5.2:7712290-7712309 | None:intergenic | 35.0% | |
| GCTGTTAATCAAGCTATTCA+CGG | + | chr5.2:7713409-7713428 | MS.gene09573:CDS | 35.0% | |
| GTGCAGTTGCTCATAATAAA+TGG | - | chr5.2:7711045-7711064 | None:intergenic | 35.0% | |
| TATGGATAAGATTGTGAGGA+GGG | + | chr5.2:7709863-7709882 | MS.gene09573:CDS | 35.0% | |
| TCTCATGAATTAAGCTTGCA+TGG | + | chr5.2:7710244-7710263 | MS.gene09573:intron | 35.0% | |
| TGGTTTAGCTGTTTAGCAAT+CGG | + | chr5.2:7711799-7711818 | MS.gene09573:intron | 35.0% | |
| TTACTGTCTAAACAGGACAT+AGG | + | chr5.2:7710601-7710620 | MS.gene09573:intron | 35.0% | |
| TTCGTTTGTGGAAATTCTTC+AGG | + | chr5.2:7712223-7712242 | MS.gene09573:intron | 35.0% | |
| TTTGAAAGTTACTGAAGGTG+AGG | + | chr5.2:7712733-7712752 | MS.gene09573:intron | 35.0% | |
| ! | AAAGTATCAAACTGTTTGGC+AGG | - | chr5.2:7709591-7709610 | None:intergenic | 35.0% |
| ! | ACTTTCACATTTTCCCTTTC+TGG | + | chr5.2:7711443-7711462 | MS.gene09573:intron | 35.0% |
| ! | AGTTCTTTAAGAAGTCGTTG+AGG | - | chr5.2:7709300-7709319 | None:intergenic | 35.0% |
| ! | GGACTCTCATATCTTGTTTA+TGG | + | chr5.2:7713430-7713449 | MS.gene09573:CDS | 35.0% |
| ! | GGCTATTTAAAGCACAAATC+TGG | + | chr5.2:7711464-7711483 | MS.gene09573:intron | 35.0% |
| ! | GGTTTTCTGTCTATGTCTAT+TGG | + | chr5.2:7710293-7710312 | MS.gene09573:intron | 35.0% |
| ! | GTGCTTTAAATAGCCAGAAA+GGG | - | chr5.2:7711459-7711478 | None:intergenic | 35.0% |
| ! | TGTGCTTTAAATAGCCAGAA+AGG | - | chr5.2:7711460-7711479 | None:intergenic | 35.0% |
| ! | TTAGTGATAGTGATTGGCAA+GGG | + | chr5.2:7711609-7711628 | MS.gene09573:intron | 35.0% |
| ! | TTTAGAATGTAACGTCTTGG+TGG | - | chr5.2:7709363-7709382 | None:intergenic | 35.0% |
| ! | TTTAGTGATAGTGATTGGCA+AGG | + | chr5.2:7711608-7711627 | MS.gene09573:intron | 35.0% |
| ! | TTTTCATGCCCATATCTAAG+TGG | - | chr5.2:7712626-7712645 | None:intergenic | 35.0% |
| !! | AGAGAGTTTATGGGTTGATT+GGG | + | chr5.2:7709775-7709794 | MS.gene09573:CDS | 35.0% |
| !! | CGTTGAGGATTGTTATTTCT+AGG | - | chr5.2:7709285-7709304 | None:intergenic | 35.0% |
| !! | TTCTAGGGAAGTCTTTTGTT+GGG | - | chr5.2:7709269-7709288 | None:intergenic | 35.0% |
| !! | TTTCTAGGGAAGTCTTTTGT+TGG | - | chr5.2:7709270-7709289 | None:intergenic | 35.0% |
| !!! | AGTTTTTTGTCATCTAGTGG+GGG | - | chr5.2:7709387-7709406 | None:intergenic | 35.0% |
| !!! | CGAGTTTTTTGTCATCTAGT+GGG | - | chr5.2:7709389-7709408 | None:intergenic | 35.0% |
| !!! | CGTGTTCTTTTTGAAGTGTT+CGG | + | chr5.2:7710838-7710857 | MS.gene09573:CDS | 35.0% |
| !!! | CTTGGTGGTGATTTTGATTT+TGG | - | chr5.2:7709348-7709367 | None:intergenic | 35.0% |
| !!! | GAGTTTTTTGTCATCTAGTG+GGG | - | chr5.2:7709388-7709407 | None:intergenic | 35.0% |
| !!! | GGTTTTAGAATGTAACGTCT+TGG | - | chr5.2:7709366-7709385 | None:intergenic | 35.0% |
| !!! | TCTTTTTGAAGTGTTCGGAA+TGG | + | chr5.2:7710843-7710862 | MS.gene09573:CDS | 35.0% |
| !!! | TGAGAAGTTAGTTGGTTTTG+GGG | - | chr5.2:7709151-7709170 | None:intergenic | 35.0% |
| AAAAAAGTGAGGTGAGGAGA+CGG | + | chr5.2:7712350-7712369 | MS.gene09573:intron | 40.0% | |
| AAAAGAACACGGTAGACTTC+TGG | - | chr5.2:7710829-7710848 | None:intergenic | 40.0% | |
| AACTTGTCTAGTGCATATGC+GGG | + | chr5.2:7711956-7711975 | MS.gene09573:intron | 40.0% | |
| AGATCAGGGTCAGGAAATAA+AGG | - | chr5.2:7712509-7712528 | None:intergenic | 40.0% | |
| AGCTTGATTAACAGCTGTTG+TGG | - | chr5.2:7713404-7713423 | None:intergenic | 40.0% | |
| ATATGTGCTGGAATTGGCAT+TGG | + | chr5.2:7709701-7709720 | MS.gene09573:CDS | 40.0% | |
| ATCCAAGTGCTCTCATAACT+TGG | - | chr5.2:7711323-7711342 | None:intergenic | 40.0% | |
| ATGCTCTGTTTACTCATCCA+AGG | + | chr5.2:7711226-7711245 | MS.gene09573:CDS | 40.0% | |
| ATTACTGACGAGACAGAGAA+GGG | + | chr5.2:7713080-7713099 | MS.gene09573:intron | 40.0% | |
| ATTTAACACGAAGCCTGAGA+AGG | - | chr5.2:7711575-7711594 | None:intergenic | 40.0% | |
| GAACAAAGACGAAGCATGTT+AGG | + | chr5.2:7709646-7709665 | MS.gene09573:CDS | 40.0% | |
| GATTGCTAAACAGCTAAACC+AGG | - | chr5.2:7711800-7711819 | None:intergenic | 40.0% | |
| GCGGAATTTCCACTTAGATA+TGG | + | chr5.2:7712614-7712633 | MS.gene09573:intron | 40.0% | |
| GTATCACTGTAGGTGTAACA+AGG | - | chr5.2:7711670-7711689 | None:intergenic | 40.0% | |
| TATTACTGACGAGACAGAGA+AGG | + | chr5.2:7713079-7713098 | MS.gene09573:intron | 40.0% | |
| TCATCCTCTAATGTGTCTGA+TGG | - | chr5.2:7709564-7709583 | None:intergenic | 40.0% | |
| TCCAAGTGCTCTCATAACTT+GGG | - | chr5.2:7711322-7711341 | None:intergenic | 40.0% | |
| TGAACCATCAGACACATTAG+AGG | + | chr5.2:7709557-7709576 | MS.gene09573:CDS | 40.0% | |
| TGCATCAAGCCTCAAAAACA+TGG | - | chr5.2:7712850-7712869 | None:intergenic | 40.0% | |
| TTTCTTAGGGCAATATGTGC+TGG | + | chr5.2:7709689-7709708 | MS.gene09573:CDS | 40.0% | |
| ! | AGCTAGCTTACTGTCTAAAC+AGG | + | chr5.2:7710594-7710613 | MS.gene09573:intron | 40.0% |
| ! | AGGTACTGTTCTTTCGTTTG+TGG | + | chr5.2:7712211-7712230 | MS.gene09573:intron | 40.0% |
| ! | ATGAAGCATTTAGATGCTCC+TGG | + | chr5.2:7713232-7713251 | MS.gene09573:CDS | 40.0% |
| ! | CTAGCAGCTTTAATCCACTT+AGG | - | chr5.2:7709813-7709832 | None:intergenic | 40.0% |
| ! | CTATCGTAGGTCGGTATTTT+GGG | + | chr5.2:7710768-7710787 | MS.gene09573:intron | 40.0% |
| ! | CTTCTAAAAAAAGGGCAACC+CGG | - | chr5.2:7711994-7712013 | None:intergenic | 40.0% |
| ! | TCTATCGTAGGTCGGTATTT+TGG | + | chr5.2:7710767-7710786 | MS.gene09573:intron | 40.0% |
| ! | TGAAGCATTTAGATGCTCCT+GGG | + | chr5.2:7713233-7713252 | MS.gene09573:CDS | 40.0% |
| ! | TGGCTGAATTCTTTTTGCAG+AGG | + | chr5.2:7709721-7709740 | MS.gene09573:CDS | 40.0% |
| !! | AGTTTATGGGTTGATTGGGA+AGG | + | chr5.2:7709779-7709798 | MS.gene09573:CDS | 40.0% |
| !! | CACTTAGAACTTGAGTTGAG+AGG | - | chr5.2:7711886-7711905 | None:intergenic | 40.0% |
| !! | GAGAGAGTTTATGGGTTGAT+TGG | + | chr5.2:7709774-7709793 | MS.gene09573:CDS | 40.0% |
| !! | GGGGCAATCTATCTTTGTTT+TGG | + | chr5.2:7710799-7710818 | MS.gene09573:CDS | 40.0% |
| !! | TTTTGGGGAGAGTGAAAAAG+AGG | - | chr5.2:7709136-7709155 | None:intergenic | 40.0% |
| !!! | CGGTATTTTGGGCTTTGTTT+GGG | + | chr5.2:7710779-7710798 | MS.gene09573:CDS | 40.0% |
| !!! | GCGAGTTTTTTGTCATCTAG+TGG | - | chr5.2:7709390-7709409 | None:intergenic | 40.0% |
| !!! | GGTATTTTGGGCTTTGTTTG+GGG | + | chr5.2:7710780-7710799 | MS.gene09573:CDS | 40.0% |
| !!! | TCGGTATTTTGGGCTTTGTT+TGG | + | chr5.2:7710778-7710797 | MS.gene09573:CDS | 40.0% |
| AAAAAGTGAGGTGAGGAGAC+GGG | + | chr5.2:7712351-7712370 | MS.gene09573:intron | 45.0% | |
| AAACTGCTTATGAGCGCAAC+CGG | + | chr5.2:7713362-7713381 | MS.gene09573:CDS | 45.0% | |
| AACCTAAGAGAAAGATGGGC+AGG | + | chr5.2:7712584-7712603 | MS.gene09573:intron | 45.0% | |
| AACGTGAAGAGGGTAGTTTC+GGG | - | chr5.2:7709229-7709248 | None:intergenic | 45.0% | |
| AAGACGAAGCATGTTAGGTC+TGG | + | chr5.2:7709651-7709670 | MS.gene09573:CDS | 45.0% | |
| AAGAGGGTAGTTTCGGGATT+TGG | - | chr5.2:7709223-7709242 | None:intergenic | 45.0% | |
| AAGATGGGCAGGGAATTATG+CGG | + | chr5.2:7712595-7712614 | MS.gene09573:intron | 45.0% | |
| AAGCTCTATGTTCCTGGCTT+CGG | - | chr5.2:7711382-7711401 | None:intergenic | 45.0% | |
| AAGTCCAAGCTCTATGTTCC+TGG | - | chr5.2:7711388-7711407 | None:intergenic | 45.0% | |
| ACCTAAGAGAAAGATGGGCA+GGG | + | chr5.2:7712585-7712604 | MS.gene09573:intron | 45.0% | |
| AGACGAAGCATGTTAGGTCT+GGG | + | chr5.2:7709652-7709671 | MS.gene09573:CDS | 45.0% | |
| AGGAACATAGAGCTTGGACT+TGG | + | chr5.2:7711387-7711406 | MS.gene09573:CDS | 45.0% | |
| AGGGCAATATGTGCTGGAAT+TGG | + | chr5.2:7709695-7709714 | MS.gene09573:CDS | 45.0% | |
| ATGTTAGGTCTGGGCATTCT+AGG | + | chr5.2:7709661-7709680 | MS.gene09573:CDS | 45.0% | |
| ATTGTGAGGAGGGATAGAGA+AGG | + | chr5.2:7709873-7709892 | MS.gene09573:CDS | 45.0% | |
| ATTTAGATGCTCCTGGGTTG+TGG | + | chr5.2:7713239-7713258 | MS.gene09573:CDS | 45.0% | |
| CAATTACGGGAAGGGATGTT+TGG | + | chr5.2:7712684-7712703 | MS.gene09573:intron | 45.0% | |
| CCAAGTGCTCTCATAACTTG+GGG | - | chr5.2:7711321-7711340 | None:intergenic | 45.0% | |
| CCATAAACTCTCTCCCTCAT+CGG | - | chr5.2:7709768-7709787 | None:intergenic | 45.0% | |
| CGATGAGGGAGAGAGTTTAT+GGG | + | chr5.2:7709766-7709785 | MS.gene09573:CDS | 45.0% | |
| CTGCAGTACAATTACGGGAA+GGG | + | chr5.2:7712676-7712695 | MS.gene09573:intron | 45.0% | |
| GAACGTGAAGAGGGTAGTTT+CGG | - | chr5.2:7709230-7709249 | None:intergenic | 45.0% | |
| GATTAACAGCTGTTGTGGCT+GGG | - | chr5.2:7713399-7713418 | None:intergenic | 45.0% | |
| GCAGAAAACAAAGCTGCAAG+TGG | - | chr5.2:7712119-7712138 | None:intergenic | 45.0% | |
| GCGCAAACAACTTGAAGATG+TGG | + | chr5.2:7710897-7710916 | MS.gene09573:CDS | 45.0% | |
| GGAAGGAGAATTTGCCTAAG+TGG | + | chr5.2:7709796-7709815 | MS.gene09573:CDS | 45.0% | |
| GTCTTTGTTCTCTCACACGA+AGG | - | chr5.2:7709636-7709655 | None:intergenic | 45.0% | |
| TCATGTAGTGAACTGCGCAA+GGG | - | chr5.2:7711842-7711861 | None:intergenic | 45.0% | |
| TGAGCAGATTCAGCCTAAAG+AGG | + | chr5.2:7713495-7713514 | MS.gene09573:CDS | 45.0% | |
| TGATTAACAGCTGTTGTGGC+TGG | - | chr5.2:7713400-7713419 | None:intergenic | 45.0% | |
| TTCCAGAAATTACCGAAGCC+AGG | + | chr5.2:7711367-7711386 | MS.gene09573:CDS | 45.0% | |
| TTCCTGGCTTCGGTAATTTC+TGG | - | chr5.2:7711372-7711391 | None:intergenic | 45.0% | |
| ! | ACACATGCTCTAAACAGCCT+TGG | - | chr5.2:7711246-7711265 | None:intergenic | 45.0% |
| ! | ATGATGCTAACAAGGGGCAT+CGG | + | chr5.2:7712926-7712945 | MS.gene09573:intron | 45.0% |
| ! | TCACATCTAAGATCAGGGTC+AGG | - | chr5.2:7712518-7712537 | None:intergenic | 45.0% |
| ! | TGAGTAAACAGAGCATCTGC+AGG | - | chr5.2:7711222-7711241 | None:intergenic | 45.0% |
| ! | TGGTTTGAGACTTTGAGCAG+TGG | + | chr5.2:7712766-7712785 | MS.gene09573:intron | 45.0% |
| !!! | CTTTTTGCAGAGGTATCCGA+GGG | + | chr5.2:7709731-7709750 | MS.gene09573:CDS | 45.0% |
| !!! | TCTTTTTGCAGAGGTATCCG+AGG | + | chr5.2:7709730-7709749 | MS.gene09573:CDS | 45.0% |
| !!! | TTATAATTTTTATATTATGT+TGG | + | chr5.2:7709939-7709958 | MS.gene09573:intron | 5.0% |
| AAAAGTGAGGTGAGGAGACG+GGG | + | chr5.2:7712352-7712371 | MS.gene09573:intron | 50.0% | |
| AGAGCTTGGACTTGGATTGC+AGG | + | chr5.2:7711395-7711414 | MS.gene09573:CDS | 50.0% | |
| ATGATGAGGATTGCCAGCCT+AGG | + | chr5.2:7710872-7710891 | MS.gene09573:CDS | 50.0% | |
| CAACTGCGAGAACGTGAAGA+GGG | - | chr5.2:7709239-7709258 | None:intergenic | 50.0% | |
| CCGATGAGGGAGAGAGTTTA+TGG | + | chr5.2:7709765-7709784 | MS.gene09573:CDS | 50.0% | |
| CGAAACCTTATGCGAGCTGT+TGG | + | chr5.2:7713017-7713036 | MS.gene09573:intron | 50.0% | |
| CGGAATGGATCCAGATGATG+AGG | + | chr5.2:7710858-7710877 | MS.gene09573:CDS | 50.0% | |
| CTCACACGAAGGATGCTGAA+AGG | - | chr5.2:7709625-7709644 | None:intergenic | 50.0% | |
| CTCTGAATCGATGCATGCCA+GGG | - | chr5.2:7711272-7711291 | None:intergenic | 50.0% | |
| GAAGCCAGGAACATAGAGCT+TGG | + | chr5.2:7711381-7711400 | MS.gene09573:CDS | 50.0% | |
| GAAGGTGAGGCTTGAGGTAT+TGG | + | chr5.2:7712746-7712765 | MS.gene09573:intron | 50.0% | |
| GCTGCAGTACAATTACGGGA+AGG | + | chr5.2:7712675-7712694 | MS.gene09573:intron | 50.0% | |
| GTCATGTAGTGAACTGCGCA+AGG | - | chr5.2:7711843-7711862 | None:intergenic | 50.0% | |
| GTTACTGAAGGTGAGGCTTG+AGG | + | chr5.2:7712740-7712759 | MS.gene09573:intron | 50.0% | |
| TCCCTGCCCATCTTTCTCTT+AGG | - | chr5.2:7712589-7712608 | None:intergenic | 50.0% | |
| TCTGAATCGATGCATGCCAG+GGG | - | chr5.2:7711271-7711290 | None:intergenic | 50.0% | |
| TGATGAGGATTGCCAGCCTA+GGG | + | chr5.2:7710873-7710892 | MS.gene09573:CDS | 50.0% | |
| TGCTTCCAACAGCTCGCATA+AGG | - | chr5.2:7713025-7713044 | None:intergenic | 50.0% | |
| TGGCCTCTCTTGCTAGAGTA+CGG | + | chr5.2:7711484-7711503 | MS.gene09573:intron | 50.0% | |
| TTGGATGGGGAAAGGAGAGA+AGG | - | chr5.2:7709184-7709203 | None:intergenic | 50.0% | |
| ! | GTAAACAGAGCATCTGCAGG+AGG | - | chr5.2:7711219-7711238 | None:intergenic | 50.0% |
| ! | TCAAGTTGTTTGCGCTCCCT+AGG | - | chr5.2:7710892-7710911 | None:intergenic | 50.0% |
| ! | TTTAGAGCATGTGTTCCCCC+TGG | + | chr5.2:7711252-7711271 | MS.gene09573:CDS | 50.0% |
| !! | CCCCAAGTTATGAGAGCACT+TGG | + | chr5.2:7711318-7711337 | MS.gene09573:CDS | 50.0% |
| !! | GGTGGGTGACCATGTTTTTG+AGG | + | chr5.2:7712838-7712857 | MS.gene09573:intron | 50.0% |
| !! | TGATGCTAACAAGGGGCATC+GGG | + | chr5.2:7712927-7712946 | MS.gene09573:intron | 50.0% |
| AGGTATCCGAGGGAATTGCC+TGG | + | chr5.2:7709741-7709760 | MS.gene09573:CDS | 55.0% | |
| ATCGGACCAGGCAATTCCCT+CGG | - | chr5.2:7709750-7709769 | None:intergenic | 55.0% | |
| CAGCCGTACTCTAGCAAGAG+AGG | - | chr5.2:7711490-7711509 | None:intergenic | 55.0% | |
| CCTCTGAATCGATGCATGCC+AGG | - | chr5.2:7711273-7711292 | None:intergenic | 55.0% | |
| CTCGAAGCGAAACAAGCGCT+TGG | + | chr5.2:7709525-7709544 | MS.gene09573:CDS | 55.0% | |
| CTGAATCGATGCATGCCAGG+GGG | - | chr5.2:7711270-7711289 | None:intergenic | 55.0% | |
| CTTATGAGCGCAACCGGAGA+CGG | + | chr5.2:7713368-7713387 | MS.gene09573:CDS | 55.0% | |
| CTTGATGCAGAGCGAGACAC+AGG | + | chr5.2:7712861-7712880 | MS.gene09573:intron | 55.0% | |
| GATGGGGAAAGGAGAGAAGG+AGG | - | chr5.2:7709181-7709200 | None:intergenic | 55.0% | |
| GCAACTGCGAGAACGTGAAG+AGG | - | chr5.2:7709240-7709259 | None:intergenic | 55.0% | |
| GCATTGTTAAGGCGCGACGA+AGG | - | chr5.2:7709477-7709496 | None:intergenic | 55.0% | |
| GGAATTGCCTGGTCCGATGA+GGG | + | chr5.2:7709752-7709771 | MS.gene09573:CDS | 55.0% | |
| GGCTGGCAATCCTCATCATC+TGG | - | chr5.2:7710871-7710890 | None:intergenic | 55.0% | |
| GGTTTCGCCTTCCAGAAGCT+CGG | - | chr5.2:7713004-7713023 | None:intergenic | 55.0% | |
| GTTTCGCCTTCCAGAAGCTC+GGG | - | chr5.2:7713003-7713022 | None:intergenic | 55.0% | |
| TTCTCTTGCAGCCACAACCC+AGG | - | chr5.2:7713253-7713272 | None:intergenic | 55.0% | |
| !! | CCTGGCATGCATCGATTCAG+AGG | + | chr5.2:7711270-7711289 | MS.gene09573:CDS | 55.0% |
| ACTCTCTCCCTCATCGGACC+AGG | - | chr5.2:7709762-7709781 | None:intergenic | 60.0% | |
| CATCGGGACAGATGCTGAGG+GGG | + | chr5.2:7712943-7712962 | MS.gene09573:intron | 60.0% | |
| CTGAGTGTCTCCCGAGCTTC+TGG | + | chr5.2:7712990-7713009 | MS.gene09573:intron | 60.0% | |
| GCATCGGGACAGATGCTGAG+GGG | + | chr5.2:7712942-7712961 | MS.gene09573:intron | 60.0% | |
| GGGAATTGCCTGGTCCGATG+AGG | + | chr5.2:7709751-7709770 | MS.gene09573:CDS | 60.0% | |
| GTGTCTCCCGAGCTTCTGGA+AGG | + | chr5.2:7712994-7713013 | MS.gene09573:intron | 60.0% | |
| GTTGTTTGCGCTCCCTAGGC+TGG | - | chr5.2:7710888-7710907 | None:intergenic | 60.0% | |
| TGGCTGGGTTTCTCCGTCTC+CGG | - | chr5.2:7713384-7713403 | None:intergenic | 60.0% | |
| ! | ATGCGGGAGCTCTAGTGCAC+CGG | + | chr5.2:7711972-7711991 | MS.gene09573:intron | 60.0% |
| ! | GGCATCGGGACAGATGCTGA+GGG | + | chr5.2:7712941-7712960 | MS.gene09573:intron | 60.0% |
| GAGACGGGGACTGGGACTCA+TGG | + | chr5.2:7712366-7712385 | MS.gene09573:intron | 65.0% | |
| GAGGTGAGGAGACGGGGACT+GGG | + | chr5.2:7712358-7712377 | MS.gene09573:intron | 65.0% | |
| TGAGGTGAGGAGACGGGGAC+TGG | + | chr5.2:7712357-7712376 | MS.gene09573:intron | 65.0% | |
| ! | TGCGGGAGCTCTAGTGCACC+GGG | + | chr5.2:7711973-7711992 | MS.gene09573:intron | 65.0% |
| !! | GGGCATCGGGACAGATGCTG+AGG | + | chr5.2:7712940-7712959 | MS.gene09573:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 7709120 | 7713522 | 7709120 | ID=MS.gene09573 |
| chr5.2 | mRNA | 7709120 | 7713522 | 7709120 | ID=MS.gene09573.t1;Parent=MS.gene09573 |
| chr5.2 | exon | 7709120 | 7709904 | 7709120 | ID=MS.gene09573.t1.exon1;Parent=MS.gene09573.t1 |
| chr5.2 | CDS | 7709120 | 7709904 | 7709120 | ID=cds.MS.gene09573.t1;Parent=MS.gene09573.t1 |
| chr5.2 | exon | 7710777 | 7710978 | 7710777 | ID=MS.gene09573.t1.exon2;Parent=MS.gene09573.t1 |
| chr5.2 | CDS | 7710777 | 7710978 | 7710777 | ID=cds.MS.gene09573.t1;Parent=MS.gene09573.t1 |
| chr5.2 | exon | 7711216 | 7711416 | 7711216 | ID=MS.gene09573.t1.exon3;Parent=MS.gene09573.t1 |
| chr5.2 | CDS | 7711216 | 7711416 | 7711216 | ID=cds.MS.gene09573.t1;Parent=MS.gene09573.t1 |
| chr5.2 | exon | 7712126 | 7712212 | 7712126 | ID=MS.gene09573.t1.exon4;Parent=MS.gene09573.t1 |
| chr5.2 | CDS | 7712126 | 7712212 | 7712126 | ID=cds.MS.gene09573.t1;Parent=MS.gene09573.t1 |
| chr5.2 | exon | 7713205 | 7713522 | 7713205 | ID=MS.gene09573.t1.exon5;Parent=MS.gene09573.t1 |
| chr5.2 | CDS | 7713205 | 7713522 | 7713205 | ID=cds.MS.gene09573.t1;Parent=MS.gene09573.t1 |
| Gene Sequence |
| Protein sequence |
