Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09767.t1 | XP_003611327.1 | 85.5 | 352 | 50 | 1 | 1 | 352 | 11 | 361 | 7.30E-127 | 463.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09767.t1 | G7JXC7 | 85.5 | 352 | 50 | 1 | 1 | 352 | 11 | 361 | 5.2e-127 | 463.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049166 | MS.gene09767 | 0.831264 | 1.84E-55 | -1.69E-46 |
| MS.gene050085 | MS.gene09767 | 0.817204 | 3.72E-52 | -1.69E-46 |
| MS.gene050317 | MS.gene09767 | 0.821021 | 5.04E-53 | -1.69E-46 |
| MS.gene050654 | MS.gene09767 | 0.800939 | 1.14E-48 | -1.69E-46 |
| MS.gene05188 | MS.gene09767 | 0.814176 | 1.76E-51 | -1.69E-46 |
| MS.gene052434 | MS.gene09767 | 0.803391 | 3.56E-49 | -1.69E-46 |
| MS.gene053381 | MS.gene09767 | 0.840442 | 8.67E-58 | -1.69E-46 |
| MS.gene056831 | MS.gene09767 | 0.819214 | 1.31E-52 | -1.69E-46 |
| MS.gene06010 | MS.gene09767 | 0.81913 | 1.36E-52 | -1.69E-46 |
| MS.gene06011 | MS.gene09767 | 0.818482 | 1.92E-52 | -1.69E-46 |
| MS.gene060296 | MS.gene09767 | 0.809957 | 1.46E-50 | -1.69E-46 |
| MS.gene060637 | MS.gene09767 | 0.818347 | 2.06E-52 | -1.69E-46 |
| MS.gene060763 | MS.gene09767 | 0.814526 | 1.47E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09767.t1 | MTR_5g012820 | 96.591 | 352 | 11 | 1 | 1 | 352 | 11 | 361 | 0.0 | 667 |
| MS.gene09767.t1 | MTR_5g012820 | 96.591 | 352 | 11 | 1 | 1 | 352 | 1 | 351 | 0.0 | 667 |
| MS.gene09767.t1 | MTR_2g079000 | 70.345 | 145 | 38 | 2 | 171 | 311 | 77 | 220 | 1.79e-52 | 173 |
| MS.gene09767.t1 | MTR_2g079000 | 68.889 | 90 | 24 | 3 | 4 | 90 | 5 | 93 | 6.83e-28 | 109 |
| MS.gene09767.t1 | MTR_2g079040 | 78.846 | 52 | 11 | 0 | 260 | 311 | 1 | 52 | 2.29e-19 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09767.t1 | AT5G05210 | 49.189 | 370 | 133 | 8 | 23 | 348 | 24 | 382 | 4.39e-92 | 280 |
| MS.gene09767.t1 | AT5G05210 | 49.189 | 370 | 133 | 8 | 23 | 348 | 16 | 374 | 1.26e-91 | 279 |
| MS.gene09767.t1 | AT2G27750 | 51.667 | 180 | 66 | 4 | 164 | 339 | 19 | 181 | 2.75e-45 | 153 |
Find 77 sgRNAs with CRISPR-Local
Find 93 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAACGAGAAACCGTGGTTTC+AGG | 0.232330 | 5.1:-5978534 | MS.gene09767:CDS |
| TGAACTTCTCAAGAAGAGTT+TGG | 0.258601 | 5.1:-5978408 | MS.gene09767:CDS |
| AGAAGTTCAAGTGTGGTTAC+AGG | 0.290349 | 5.1:+5978422 | None:intergenic |
| GCAGCAATGGACAGAGCTTC+AGG | 0.337717 | 5.1:-5977903 | MS.gene09767:CDS |
| AGTGTGGTTACAGGCTTCTC+AGG | 0.342543 | 5.1:+5978431 | None:intergenic |
| GTTTGGTCACGTTAAACTTC+AGG | 0.346929 | 5.1:-5978057 | MS.gene09767:CDS |
| GAACTTCTCAAGAAGAGTTT+GGG | 0.346980 | 5.1:-5978407 | MS.gene09767:CDS |
| CAAGCTTGCGATGAAGCCTT+TGG | 0.361638 | 5.1:+5978282 | None:intergenic |
| TGTTGATGCTGGTCAGGATT+TGG | 0.363037 | 5.1:-5978639 | MS.gene09767:CDS |
| ACAGAATATCAAGAAGTCTA+AGG | 0.367209 | 5.1:-5978468 | MS.gene09767:CDS |
| CTATTGCGGCCGGGCTTTGA+AGG | 0.371671 | 5.1:-5977675 | MS.gene09767:CDS |
| AGGTGCAGGCTTACTTTCAT+TGG | 0.379875 | 5.1:+5978139 | None:intergenic |
| TTCTCTTGTAGCTTCTCATC+AGG | 0.381853 | 5.1:+5978119 | None:intergenic |
| CAAGAGAGGATATCATTATC+AGG | 0.385515 | 5.1:-5978189 | MS.gene09767:CDS |
| GGACAGAGCTTCAGGAATTA+AGG | 0.391083 | 5.1:-5977895 | MS.gene09767:CDS |
| GATAAAGAAAAGCATACATA+AGG | 0.405087 | 5.1:-5977853 | MS.gene09767:CDS |
| AGAGTTTGTTGATGCTGGTC+AGG | 0.419926 | 5.1:-5978645 | MS.gene09767:CDS |
| GCTTCAAAGGAGCTTGTGTT+TGG | 0.427667 | 5.1:-5978074 | MS.gene09767:CDS |
| GCAATAGCTTCACCCTTCTC+AGG | 0.428203 | 5.1:+5977945 | None:intergenic |
| AACTCGTAACTGTGCAGATC+CGG | 0.428390 | 5.1:-5978246 | MS.gene09767:CDS |
| GGCCGGGCTTTGAAGGTCAC+AGG | 0.430067 | 5.1:-5977668 | MS.gene09767:CDS |
| CCTTTGGCGAAGCTCTTCAT+AGG | 0.445722 | 5.1:+5978298 | None:intergenic |
| AACGAGAAACCGTGGTTTCA+GGG | 0.456991 | 5.1:-5978533 | MS.gene09767:CDS |
| ATAAAGAAAAGCATACATAA+GGG | 0.460274 | 5.1:-5977852 | MS.gene09767:CDS |
| GATGAAGATGAGGAAGCAAA+AGG | 0.460578 | 5.1:-5978675 | MS.gene09767:CDS |
| GGGTGAAGCTATTGCTAAGA+AGG | 0.461254 | 5.1:-5977937 | MS.gene09767:CDS |
| TGTAGCTTCTCATCAGGTGC+AGG | 0.468170 | 5.1:+5978125 | None:intergenic |
| GTCGCAGAGTTTGTTGATGC+TGG | 0.468857 | 5.1:-5978650 | MS.gene09767:CDS |
| GGATGCCGCGGAGGCTTCAA+AGG | 0.475053 | 5.1:-5978087 | MS.gene09767:CDS |
| GTTGGCAGATAAAACTTAGC+TGG | 0.478956 | 5.1:+5978563 | None:intergenic |
| AGGCTTCATCGCAAGCTTGA+AGG | 0.479052 | 5.1:-5978278 | MS.gene09767:CDS |
| CTGATAATGATATCCTCTCT+TGG | 0.486659 | 5.1:+5978190 | None:intergenic |
| GGGAAGAGAGAGTTCAATCA+AGG | 0.493714 | 5.1:-5977797 | MS.gene09767:CDS |
| AGGTGAGGAAGAAGAGGATG+TGG | 0.498717 | 5.1:-5978366 | MS.gene09767:CDS |
| GCTACAAGAGAAGGTGAAGA+AGG | 0.500602 | 5.1:-5978108 | MS.gene09767:CDS |
| ACTTGAAAGGGCTAAGAAGT+TGG | 0.501671 | 5.1:-5977988 | MS.gene09767:CDS |
| CCGTCCAGCTCCGACACAAA+AGG | 0.502260 | 5.1:+5978338 | None:intergenic |
| CGGAAAAGGCTGCTAAGAAG+AGG | 0.504510 | 5.1:-5978226 | MS.gene09767:CDS |
| AAAGCACAAGGAACTTGAAA+GGG | 0.512350 | 5.1:-5978000 | MS.gene09767:CDS |
| TAACTGTGCAGATCCGGAAA+AGG | 0.514146 | 5.1:-5978240 | MS.gene09767:CDS |
| CAAGAAGAAACAGAAAGAAA+AGG | 0.517892 | 5.1:-5978507 | MS.gene09767:CDS |
| TCAATCAAGGGATCAGTTGA+AGG | 0.518168 | 5.1:-5977784 | MS.gene09767:CDS |
| GGCTTTGAAGGTCACAGGGA+AGG | 0.530107 | 5.1:-5977663 | MS.gene09767:CDS |
| AGGCAGAGAAGCAAAAGAAA+AGG | 0.532776 | 5.1:-5977764 | MS.gene09767:CDS |
| TTCTTGAGACCCTGAAACCA+CGG | 0.535018 | 5.1:+5978524 | None:intergenic |
| ATGAAGATGAGGAAGCAAAA+GGG | 0.538585 | 5.1:-5978674 | MS.gene09767:CDS |
| ACTTTGGAGTGATGAAGATG+AGG | 0.541362 | 5.1:-5978685 | None:intergenic |
| CAAAGCACAAGGAACTTGAA+AGG | 0.542564 | 5.1:-5978001 | MS.gene09767:CDS |
| TCACGTTAAACTTCAGGATG+AGG | 0.542978 | 5.1:-5978051 | MS.gene09767:CDS |
| GAATGAAGGTGAGGAAGAAG+AGG | 0.544065 | 5.1:-5978372 | MS.gene09767:CDS |
| GGAAGCATGGAAAGCAGCAA+TGG | 0.549880 | 5.1:-5977916 | MS.gene09767:CDS |
| TTATCAATTTGGGATCGTCA+TGG | 0.557381 | 5.1:+5977871 | None:intergenic |
| GGATTAATGATAAGAAAATG+AGG | 0.557444 | 5.1:-5977722 | MS.gene09767:CDS |
| GGTTTCTCGTTATCATCAGT+TGG | 0.560730 | 5.1:+5978545 | None:intergenic |
| GAAGAAGAATGATCCTGAGA+AGG | 0.567162 | 5.1:-5977958 | MS.gene09767:CDS |
| CTTCAGGATGAGGAAATGCT+AGG | 0.569079 | 5.1:-5978041 | MS.gene09767:CDS |
| TCCCTGTGACCTTCAAAGCC+CGG | 0.571851 | 5.1:+5977666 | None:intergenic |
| TGAAAGGGCTAAGAAGTTGG+AGG | 0.572734 | 5.1:-5977985 | MS.gene09767:CDS |
| TGATGAGAAGCTACAAGAGA+AGG | 0.587083 | 5.1:-5978117 | MS.gene09767:CDS |
| GTGTGGTTACAGGCTTCTCA+GGG | 0.588570 | 5.1:+5978432 | None:intergenic |
| CGGAGCTGGACGGAGATGAT+CGG | 0.591449 | 5.1:-5978328 | MS.gene09767:CDS |
| ATCAGGATAATAAACGCAAG+AGG | 0.601271 | 5.1:-5978172 | MS.gene09767:CDS |
| AAGAAGAATGATCCTGAGAA+GGG | 0.603235 | 5.1:-5977957 | MS.gene09767:CDS |
| CTATTGCTAAGAAGGAAGCA+TGG | 0.605991 | 5.1:-5977929 | MS.gene09767:CDS |
| GAAGGTGAAGAAGGATGCCG+CGG | 0.613578 | 5.1:-5978099 | MS.gene09767:CDS |
| CTTCTTGAGAAGTTCAAGTG+TGG | 0.616015 | 5.1:+5978415 | None:intergenic |
| TAAAGAAAAGCATACATAAG+GGG | 0.624269 | 5.1:-5977851 | MS.gene09767:CDS |
| TCAGGATAATAAACGCAAGA+GGG | 0.627512 | 5.1:-5978171 | MS.gene09767:CDS |
| GGAAGAGAGAGTTCAATCAA+GGG | 0.629511 | 5.1:-5977796 | MS.gene09767:CDS |
| GGAAAAGGCTGCTAAGAAGA+GGG | 0.647760 | 5.1:-5978225 | MS.gene09767:CDS |
| GCCGGGCTTTGAAGGTCACA+GGG | 0.648501 | 5.1:-5977667 | MS.gene09767:CDS |
| GGTGAAGAAGGATGCCGCGG+AGG | 0.652339 | 5.1:-5978096 | MS.gene09767:CDS |
| CCTATGAAGAGCTTCGCCAA+AGG | 0.661576 | 5.1:-5978298 | MS.gene09767:CDS |
| GAAGATAGAGACACCAAGAG+AGG | 0.685788 | 5.1:-5978203 | MS.gene09767:CDS |
| AAGCTCCTTTGAAGCCTCCG+CGG | 0.690454 | 5.1:+5978082 | None:intergenic |
| GGTCAGATAATATAGCTGAG+AGG | 0.714827 | 5.1:-5977743 | MS.gene09767:CDS |
| CTGATGATAACGAGAAACCG+TGG | 0.715203 | 5.1:-5978541 | MS.gene09767:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAAGAAAAGCATACATAA+GGG | - | chr5.1:5978460-5978479 | MS.gene09767:CDS | 20.0% |
| !!! | ATGCTTTTCTTTATCAATTT+GGG | + | chr5.1:5978454-5978473 | None:intergenic | 20.0% |
| !!! | TATGCTTTTCTTTATCAATT+TGG | + | chr5.1:5978455-5978474 | None:intergenic | 20.0% |
| ! | AACCAATTTGTCAAAAAAAC+TGG | + | chr5.1:5977720-5977739 | None:intergenic | 25.0% |
| ! | AAGAAAAAAATGCAGAGAAA+TGG | - | chr5.1:5978494-5978513 | MS.gene09767:CDS | 25.0% |
| ! | AGAAAAAAATGCAGAGAAAT+GGG | - | chr5.1:5978495-5978514 | MS.gene09767:CDS | 25.0% |
| ! | GGATTAATGATAAGAAAATG+AGG | - | chr5.1:5978590-5978609 | MS.gene09767:CDS | 25.0% |
| !! | GATAAAGAAAAGCATACATA+AGG | - | chr5.1:5978459-5978478 | MS.gene09767:CDS | 25.0% |
| !! | TAAAGAAAAGCATACATAAG+GGG | - | chr5.1:5978461-5978480 | MS.gene09767:CDS | 25.0% |
| ACAGAATATCAAGAAGTCTA+AGG | - | chr5.1:5977844-5977863 | MS.gene09767:CDS | 30.0% | |
| CAAGAAGAAACAGAAAGAAA+AGG | - | chr5.1:5977805-5977824 | MS.gene09767:CDS | 30.0% | |
| GAGAAAAATTTCAAAGCACA+AGG | - | chr5.1:5978300-5978319 | MS.gene09767:CDS | 30.0% | |
| !!! | GGTTTTATTAATAGCAGTTC+TGG | - | chr5.1:5978670-5978689 | MS.gene09767:CDS | 30.0% |
| !!! | TGCCAGTTTTTTTGACAAAT+TGG | - | chr5.1:5977715-5977734 | MS.gene09767:CDS | 30.0% |
| AAAGCACAAGGAACTTGAAA+GGG | - | chr5.1:5978312-5978331 | MS.gene09767:CDS | 35.0% | |
| AAGAAGAATGATCCTGAGAA+GGG | - | chr5.1:5978355-5978374 | MS.gene09767:CDS | 35.0% | |
| AGAGAGAGAAAAAGCTATTG+CGG | - | chr5.1:5978623-5978642 | MS.gene09767:CDS | 35.0% | |
| ATCAGGATAATAAACGCAAG+AGG | - | chr5.1:5978140-5978159 | MS.gene09767:CDS | 35.0% | |
| ATGAAGATGAGGAAGCAAAA+GGG | - | chr5.1:5977638-5977657 | MS.gene09767:CDS | 35.0% | |
| CAAGAGAGGATATCATTATC+AGG | - | chr5.1:5978123-5978142 | MS.gene09767:CDS | 35.0% | |
| GAACTTCTCAAGAAGAGTTT+GGG | - | chr5.1:5977905-5977924 | MS.gene09767:CDS | 35.0% | |
| GGAAAAGAAAAAGCGAATGA+AGG | - | chr5.1:5977926-5977945 | MS.gene09767:CDS | 35.0% | |
| TCAGGATAATAAACGCAAGA+GGG | - | chr5.1:5978141-5978160 | MS.gene09767:CDS | 35.0% | |
| TGAACTTCTCAAGAAGAGTT+TGG | - | chr5.1:5977904-5977923 | MS.gene09767:CDS | 35.0% | |
| ! | CTGATAATGATATCCTCTCT+TGG | + | chr5.1:5978125-5978144 | None:intergenic | 35.0% |
| ! | TTATCAATTTGGGATCGTCA+TGG | + | chr5.1:5978444-5978463 | None:intergenic | 35.0% |
| ACTTGAAAGGGCTAAGAAGT+TGG | - | chr5.1:5978324-5978343 | MS.gene09767:CDS | 40.0% | |
| AGAAAAAGCGAATGAAGGTG+AGG | - | chr5.1:5977931-5977950 | MS.gene09767:CDS | 40.0% | |
| AGAAGTTCAAGTGTGGTTAC+AGG | + | chr5.1:5977893-5977912 | None:intergenic | 40.0% | |
| AGGCAGAGAAGCAAAAGAAA+AGG | - | chr5.1:5978548-5978567 | MS.gene09767:CDS | 40.0% | |
| CAAAGCACAAGGAACTTGAA+AGG | - | chr5.1:5978311-5978330 | MS.gene09767:CDS | 40.0% | |
| CTATTGCTAAGAAGGAAGCA+TGG | - | chr5.1:5978383-5978402 | MS.gene09767:CDS | 40.0% | |
| CTTCTTGAGAAGTTCAAGTG+TGG | + | chr5.1:5977900-5977919 | None:intergenic | 40.0% | |
| GAAGAAGAATGATCCTGAGA+AGG | - | chr5.1:5978354-5978373 | MS.gene09767:CDS | 40.0% | |
| GGAAGAGAGAGTTCAATCAA+GGG | - | chr5.1:5978516-5978535 | MS.gene09767:CDS | 40.0% | |
| GGTCAGATAATATAGCTGAG+AGG | - | chr5.1:5978569-5978588 | MS.gene09767:CDS | 40.0% | |
| GGTTTCTCGTTATCATCAGT+TGG | + | chr5.1:5977770-5977789 | None:intergenic | 40.0% | |
| GTTGGCAGATAAAACTTAGC+TGG | + | chr5.1:5977752-5977771 | None:intergenic | 40.0% | |
| GTTTGGTCACGTTAAACTTC+AGG | - | chr5.1:5978255-5978274 | MS.gene09767:CDS | 40.0% | |
| TCAATCAAGGGATCAGTTGA+AGG | - | chr5.1:5978528-5978547 | MS.gene09767:CDS | 40.0% | |
| TCACGTTAAACTTCAGGATG+AGG | - | chr5.1:5978261-5978280 | MS.gene09767:CDS | 40.0% | |
| TGATGAGAAGCTACAAGAGA+AGG | - | chr5.1:5978195-5978214 | MS.gene09767:CDS | 40.0% | |
| TTCTCTTGTAGCTTCTCATC+AGG | + | chr5.1:5978196-5978215 | None:intergenic | 40.0% | |
| ! | ATCGCAAGCTTGAAGGTTTT+CGG | - | chr5.1:5978041-5978060 | MS.gene09767:CDS | 40.0% |
| ! | TGTGGTTAAGCCTTTTGTGT+CGG | - | chr5.1:5977964-5977983 | MS.gene09767:CDS | 40.0% |
| AACGAGAAACCGTGGTTTCA+GGG | - | chr5.1:5977779-5977798 | MS.gene09767:CDS | 45.0% | |
| AACTCGTAACTGTGCAGATC+CGG | - | chr5.1:5978066-5978085 | MS.gene09767:CDS | 45.0% | |
| AGAGAAAAAGCTATTGCGGC+CGG | - | chr5.1:5978627-5978646 | MS.gene09767:CDS | 45.0% | |
| AGGTGCAGGCTTACTTTCAT+TGG | + | chr5.1:5978176-5978195 | None:intergenic | 45.0% | |
| CTTCAGGATGAGGAAATGCT+AGG | - | chr5.1:5978271-5978290 | MS.gene09767:CDS | 45.0% | |
| GAAGATAGAGACACCAAGAG+AGG | - | chr5.1:5978109-5978128 | MS.gene09767:CDS | 45.0% | |
| GAATGAAGGTGAGGAAGAAG+AGG | - | chr5.1:5977940-5977959 | MS.gene09767:CDS | 45.0% | |
| GCTACAAGAGAAGGTGAAGA+AGG | - | chr5.1:5978204-5978223 | MS.gene09767:CDS | 45.0% | |
| GCTTCAAAGGAGCTTGTGTT+TGG | - | chr5.1:5978238-5978257 | MS.gene09767:CDS | 45.0% | |
| GGAAAAGGCTGCTAAGAAGA+GGG | - | chr5.1:5978087-5978106 | MS.gene09767:CDS | 45.0% | |
| GGACAGAGCTTCAGGAATTA+AGG | - | chr5.1:5978417-5978436 | MS.gene09767:CDS | 45.0% | |
| GGGAAGAGAGAGTTCAATCA+AGG | - | chr5.1:5978515-5978534 | MS.gene09767:CDS | 45.0% | |
| GGGTGAAGCTATTGCTAAGA+AGG | - | chr5.1:5978375-5978394 | MS.gene09767:CDS | 45.0% | |
| TAACGAGAAACCGTGGTTTC+AGG | - | chr5.1:5977778-5977797 | MS.gene09767:CDS | 45.0% | |
| TAACTGTGCAGATCCGGAAA+AGG | - | chr5.1:5978072-5978091 | MS.gene09767:CDS | 45.0% | |
| TGAAAGGGCTAAGAAGTTGG+AGG | - | chr5.1:5978327-5978346 | MS.gene09767:CDS | 45.0% | |
| TGTTGATGCTGGTCAGGATT+TGG | - | chr5.1:5977673-5977692 | MS.gene09767:CDS | 45.0% | |
| TTCTTGAGACCCTGAAACCA+CGG | + | chr5.1:5977791-5977810 | None:intergenic | 45.0% | |
| ! | CTCTTCTTAGCAGCCTTTTC+CGG | + | chr5.1:5978088-5978107 | None:intergenic | 45.0% |
| ! | CTGATGATAACGAGAAACCG+TGG | - | chr5.1:5977771-5977790 | MS.gene09767:CDS | 45.0% |
| !! | AGAGTTTGTTGATGCTGGTC+AGG | - | chr5.1:5977667-5977686 | MS.gene09767:CDS | 45.0% |
| AGGCTTCATCGCAAGCTTGA+AGG | - | chr5.1:5978034-5978053 | MS.gene09767:CDS | 50.0% | |
| AGGTGAGGAAGAAGAGGATG+TGG | - | chr5.1:5977946-5977965 | MS.gene09767:CDS | 50.0% | |
| AGTGTGGTTACAGGCTTCTC+AGG | + | chr5.1:5977884-5977903 | None:intergenic | 50.0% | |
| CAAGCTTGCGATGAAGCCTT+TGG | + | chr5.1:5978033-5978052 | None:intergenic | 50.0% | |
| CCTATGAAGAGCTTCGCCAA+AGG | - | chr5.1:5978014-5978033 | MS.gene09767:CDS | 50.0% | |
| CCTTTGGCGAAGCTCTTCAT+AGG | + | chr5.1:5978017-5978036 | None:intergenic | 50.0% | |
| CGGAAAAGGCTGCTAAGAAG+AGG | - | chr5.1:5978086-5978105 | MS.gene09767:CDS | 50.0% | |
| GAGAAAAAGCTATTGCGGCC+GGG | - | chr5.1:5978628-5978647 | MS.gene09767:CDS | 50.0% | |
| GCAATAGCTTCACCCTTCTC+AGG | + | chr5.1:5978370-5978389 | None:intergenic | 50.0% | |
| GTGTGGTTACAGGCTTCTCA+GGG | + | chr5.1:5977883-5977902 | None:intergenic | 50.0% | |
| TGTAGCTTCTCATCAGGTGC+AGG | + | chr5.1:5978190-5978209 | None:intergenic | 50.0% | |
| ! | GGAAGCATGGAAAGCAGCAA+TGG | - | chr5.1:5978396-5978415 | MS.gene09767:CDS | 50.0% |
| ! | TAAGCCTTTTGTGTCGGAGC+TGG | - | chr5.1:5977970-5977989 | MS.gene09767:CDS | 50.0% |
| !! | GTCGCAGAGTTTGTTGATGC+TGG | - | chr5.1:5977662-5977681 | MS.gene09767:CDS | 50.0% |
| GAAGGTGAAGAAGGATGCCG+CGG | - | chr5.1:5978213-5978232 | MS.gene09767:CDS | 55.0% | |
| GCAGCAATGGACAGAGCTTC+AGG | - | chr5.1:5978409-5978428 | MS.gene09767:CDS | 55.0% | |
| TCCCTGTGACCTTCAAAGCC+CGG | + | chr5.1:5978649-5978668 | None:intergenic | 55.0% | |
| ! | CCTTTTGTGTCGGAGCTGGA+CGG | - | chr5.1:5977974-5977993 | MS.gene09767:CDS | 55.0% |
| !! | AAGCTCCTTTGAAGCCTCCG+CGG | + | chr5.1:5978233-5978252 | None:intergenic | 55.0% |
| !! | GGCTTTGAAGGTCACAGGGA+AGG | - | chr5.1:5978649-5978668 | MS.gene09767:CDS | 55.0% |
| CCGTCCAGCTCCGACACAAA+AGG | + | chr5.1:5977977-5977996 | None:intergenic | 60.0% | |
| CGGAGCTGGACGGAGATGAT+CGG | - | chr5.1:5977984-5978003 | MS.gene09767:CDS | 60.0% | |
| ! | CTATTGCGGCCGGGCTTTGA+AGG | - | chr5.1:5978637-5978656 | MS.gene09767:CDS | 60.0% |
| !! | GCCGGGCTTTGAAGGTCACA+GGG | - | chr5.1:5978645-5978664 | MS.gene09767:CDS | 60.0% |
| GGATGCCGCGGAGGCTTCAA+AGG | - | chr5.1:5978225-5978244 | MS.gene09767:CDS | 65.0% | |
| GGTGAAGAAGGATGCCGCGG+AGG | - | chr5.1:5978216-5978235 | MS.gene09767:CDS | 65.0% | |
| !! | GGCCGGGCTTTGAAGGTCAC+AGG | - | chr5.1:5978644-5978663 | MS.gene09767:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 5977638 | 5978696 | 5977638 | ID=MS.gene09767 |
| chr5.1 | mRNA | 5977638 | 5978696 | 5977638 | ID=MS.gene09767.t1;Parent=MS.gene09767 |
| chr5.1 | exon | 5977638 | 5978696 | 5977638 | ID=MS.gene09767.t1.exon1;Parent=MS.gene09767.t1 |
| chr5.1 | CDS | 5977638 | 5978696 | 5977638 | ID=cds.MS.gene09767.t1;Parent=MS.gene09767.t1 |
| Gene Sequence |
| Protein sequence |
