Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20014.t1 | XP_003591748.3 | 99.3 | 843 | 6 | 0 | 1 | 843 | 1 | 843 | 0.00E+00 | 1687.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20014.t1 | F4J3T8 | 67.0 | 839 | 257 | 7 | 14 | 843 | 13 | 840 | 0.0e+00 | 1111.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20014.t1 | A0A396JSR1 | 99.3 | 843 | 6 | 0 | 1 | 843 | 1 | 843 | 0.0e+00 | 1687.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene20014 | MS.gene52620 | PPI |
| MS.gene20014 | MS.gene064542 | PPI |
| MS.gene035805 | MS.gene20014 | PPI |
| MS.gene005189 | MS.gene20014 | PPI |
| MS.gene20014 | MS.gene91547 | PPI |
| MS.gene20014 | MS.gene73119 | PPI |
| MS.gene44056 | MS.gene20014 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20014.t1 | MTR_1g492590 | 99.440 | 536 | 3 | 0 | 308 | 843 | 7 | 542 | 0.0 | 1113 |
| MS.gene20014.t1 | MTR_1g092570 | 98.710 | 310 | 4 | 0 | 1 | 310 | 1 | 310 | 0.0 | 633 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20014.t1 | AT3G10550 | 67.104 | 839 | 256 | 7 | 14 | 843 | 13 | 840 | 0.0 | 1137 |
| MS.gene20014.t1 | AT5G04540 | 63.822 | 832 | 282 | 5 | 14 | 840 | 13 | 830 | 0.0 | 1044 |
Find 201 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTCCAATGGTGCGATTAT+TGG | 0.179147 | 1.4:+72609054 | MS.gene20014:CDS |
| TCGGACATTCAGAGGGTTTC+AGG | 0.180121 | 1.4:+72612620 | MS.gene20014:CDS |
| TCCCCACTATGTGCTTCTTC+TGG | 0.182525 | 1.4:-72615180 | None:intergenic |
| TTGGAAACTTCTTCTTTAAT+AGG | 0.208642 | 1.4:+72614098 | MS.gene20014:CDS |
| GTACTTCAGTGGATCATAAA+AGG | 0.224393 | 1.4:-72615082 | None:intergenic |
| TGAAAAGGGAACCTCAATTT+TGG | 0.235304 | 1.4:-72603620 | None:intergenic |
| GATATGAGAATTATAGTCTT+TGG | 0.249660 | 1.4:+72608348 | MS.gene20014:CDS |
| GTACAAAGCCCACAATATTA+TGG | 0.253124 | 1.4:+72608987 | MS.gene20014:CDS |
| ATGAATTACCTAATGCTCTT+TGG | 0.263678 | 1.4:-72609232 | None:intergenic |
| CTTCTGTTCTTGTTCATTGC+AGG | 0.263762 | 1.4:+72612431 | MS.gene20014:CDS |
| AAGCCCAACGAAGGTGAAAT+TGG | 0.268121 | 1.4:-72615155 | None:intergenic |
| CCTCTGAATGTCCGATAATA+TGG | 0.271777 | 1.4:-72612612 | None:intergenic |
| GATCTTTATGCTTATTCGTC+TGG | 0.282063 | 1.4:+72609010 | MS.gene20014:CDS |
| GTCGGGGCTAACGCTGCTGC+TGG | 0.282113 | 1.4:-72615123 | None:intergenic |
| ACTTTGGCACATTGTATAAC+TGG | 0.299034 | 1.4:-72609188 | None:intergenic |
| GCCGTCTGCCTGTAATTTCT+TGG | 0.302001 | 1.4:+72609396 | MS.gene20014:CDS |
| TTTCATTATTAAGGCTTTCC+TGG | 0.313939 | 1.4:+72614042 | MS.gene20014:intron |
| CAGCGTTAGCCCCGACTATA+TGG | 0.337540 | 1.4:+72615130 | MS.gene20014:CDS |
| AGAGACATGGTGGGTCGATA+TGG | 0.337896 | 1.4:+72612281 | MS.gene20014:intron |
| TGGATGTTTGTGGGCATACT+TGG | 0.348237 | 1.4:+72615014 | MS.gene20014:CDS |
| TGTTGCTTGATCCATATTAT+CGG | 0.355341 | 1.4:+72612601 | MS.gene20014:CDS |
| TGGTTGTTCCAAAGAGCATT+AGG | 0.357442 | 1.4:+72609224 | MS.gene20014:CDS |
| TCGGGGCTAACGCTGCTGCT+GGG | 0.359394 | 1.4:-72615122 | None:intergenic |
| AAGCGTGCAATTCAGTCAAT+TGG | 0.363650 | 1.4:+72615622 | MS.gene20014:CDS |
| CCCCACTATGTGCTTCTTCT+GGG | 0.364165 | 1.4:-72615179 | None:intergenic |
| GGAGAGACAAAACGCGAAAT+TGG | 0.366962 | 1.4:-72603713 | None:intergenic |
| TGCATGCTTTCTTCTCGCTT+TGG | 0.368459 | 1.4:+72614079 | MS.gene20014:CDS |
| ATTTAGGAACTCAATTTACT+TGG | 0.383255 | 1.4:-72615986 | None:intergenic |
| CTGACTCCTCCACCGGTAGC+TGG | 0.384134 | 1.4:+72603581 | MS.gene20014:CDS |
| AGCCCAACGAAGGTGAAATT+GGG | 0.384756 | 1.4:-72615154 | None:intergenic |
| GATGATGGAAACGATGTTAT+TGG | 0.384760 | 1.4:+72615808 | MS.gene20014:CDS |
| TCACCAATGCGCCAGCCATC+AGG | 0.388168 | 1.4:+72612936 | MS.gene20014:CDS |
| TGTGGGCATACTTGGCTGAT+AGG | 0.391042 | 1.4:+72615022 | MS.gene20014:CDS |
| CGGGGCTAACGCTGCTGCTG+GGG | 0.391769 | 1.4:-72615121 | None:intergenic |
| CATGAGTGTCTATGAATTCT+CGG | 0.393322 | 1.4:-72611735 | None:intergenic |
| TGCTGTGATTAACGACAAAA+AGG | 0.394698 | 1.4:+72615753 | MS.gene20014:CDS |
| ACGTGTCTTTCGAGTTATCT+AGG | 0.396410 | 1.4:+72612889 | MS.gene20014:CDS |
| CTCCATCTTTCGTACGAAAC+GGG | 0.397679 | 1.4:-72615852 | None:intergenic |
| CAACTAGGTAGCCAGTTTGT+TGG | 0.399476 | 1.4:+72615904 | MS.gene20014:CDS |
| GGCTGGCGCATTGGTGATGA+TGG | 0.401459 | 1.4:-72612930 | None:intergenic |
| ATCTTTATGCTTATTCGTCT+GGG | 0.406653 | 1.4:+72609011 | MS.gene20014:CDS |
| AAGTTTGGATGTGCTCCCGC+TGG | 0.409201 | 1.4:-72615700 | None:intergenic |
| GGCCCCAATTTCACCTTCGT+TGG | 0.409598 | 1.4:+72615151 | MS.gene20014:CDS |
| CTAGAGGAACAATACAAGTT+TGG | 0.409967 | 1.4:-72615715 | None:intergenic |
| CTGCTTCAGTATCAACCCTT+GGG | 0.412831 | 1.4:+72612329 | MS.gene20014:CDS |
| GAGACATGGTGGGTCGATAT+GGG | 0.413049 | 1.4:+72612282 | MS.gene20014:intron |
| GAAATTGGGGCCATATAGTC+GGG | 0.423097 | 1.4:-72615140 | None:intergenic |
| AATTAGCAAGTGAAACTAAC+TGG | 0.423507 | 1.4:-72612578 | None:intergenic |
| CCATCTCATGCACATAGTTC+AGG | 0.427292 | 1.4:+72612975 | MS.gene20014:CDS |
| TGCCCGTTTCGTACGAAAGA+TGG | 0.429206 | 1.4:+72615850 | MS.gene20014:CDS |
| CCAAAGTTATCCATTTGCTT+TGG | 0.430574 | 1.4:+72609204 | MS.gene20014:CDS |
| TTGAAAGTTGTGGATGTTTG+TGG | 0.432364 | 1.4:+72615004 | MS.gene20014:CDS |
| CGTTCTTCCCAACCTTTAGT+TGG | 0.432900 | 1.4:+72609539 | MS.gene20014:CDS |
| AAACTTGTGGCCGCACTTTG+TGG | 0.438003 | 1.4:+72610013 | MS.gene20014:CDS |
| GTGGGAACACCGTCTATCTC+TGG | 0.440063 | 1.4:+72612858 | MS.gene20014:CDS |
| GCCCCAATTTCACCTTCGTT+GGG | 0.446668 | 1.4:+72615152 | MS.gene20014:CDS |
| TACAAAGCCCACAATATTAT+GGG | 0.447087 | 1.4:+72608988 | MS.gene20014:CDS |
| AGCTTCTCATCATGCTTCAA+TGG | 0.447240 | 1.4:+72609102 | MS.gene20014:CDS |
| TCGCTTTCAAACCAACAAAC+TGG | 0.447453 | 1.4:-72615915 | None:intergenic |
| TTCTCCACAAGTCATTTGAC+AGG | 0.447739 | 1.4:-72609150 | None:intergenic |
| TTATCTAGGCAGTCTTCAAC+TGG | 0.448887 | 1.4:+72612903 | MS.gene20014:CDS |
| AGTTGAGCACAACCACCATT+TGG | 0.453492 | 1.4:-72615886 | None:intergenic |
| CAAAGACTGCTGCAGGTGAT+TGG | 0.455555 | 1.4:+72607932 | MS.gene20014:CDS |
| TTGCACGGAATTTGCAAGCC+TGG | 0.457643 | 1.4:-72609370 | None:intergenic |
| GGATGACACCAAGAAATTAC+AGG | 0.458798 | 1.4:-72609404 | None:intergenic |
| TTTCTTTGGTAGTGATGGAT+GGG | 0.460490 | 1.4:+72612545 | MS.gene20014:intron |
| GTATCAACCCTTGGGGATAG+TGG | 0.461368 | 1.4:+72612337 | MS.gene20014:CDS |
| GAGGTAATGTCCCTGATGGC+TGG | 0.463496 | 1.4:-72612947 | None:intergenic |
| ACTAGAAAAGTTATTGCCCT+TGG | 0.465404 | 1.4:+72607201 | MS.gene20014:CDS |
| TGGAGAGGTGTTCTTAAAAG+TGG | 0.466314 | 1.4:-72609038 | None:intergenic |
| TGTCTTGTTAAACTTCTCAA+TGG | 0.471583 | 1.4:-72607241 | None:intergenic |
| TGCTCGTGTTGCTATGGAAA+AGG | 0.473459 | 1.4:+72612408 | MS.gene20014:CDS |
| TGAAAGTTGTGGATGTTTGT+GGG | 0.475142 | 1.4:+72615005 | MS.gene20014:CDS |
| GAGGATAACCAAAGAAAATA+CGG | 0.475246 | 1.4:+72615594 | MS.gene20014:CDS |
| GGCATCCCAGCTACCGGTGG+AGG | 0.478455 | 1.4:-72603587 | None:intergenic |
| AACTGTCATCAATTGAAAGT+TGG | 0.478726 | 1.4:-72615954 | None:intergenic |
| CAAACTTGTATTGTTCCTCT+AGG | 0.478848 | 1.4:+72615716 | MS.gene20014:CDS |
| CATGAGACCAACTAAAGGTT+GGG | 0.480942 | 1.4:-72609546 | None:intergenic |
| GATTGCTGCTCGTGTTGCTA+TGG | 0.482381 | 1.4:+72612402 | MS.gene20014:CDS |
| GGCATACTTGGCTGATAGGC+GGG | 0.484201 | 1.4:+72615026 | MS.gene20014:CDS |
| GTAATTTCTTGGTGTCATCC+TGG | 0.484344 | 1.4:+72609407 | MS.gene20014:CDS |
| TTTGGAACAACCAAAGCAAA+TGG | 0.486763 | 1.4:-72609214 | None:intergenic |
| ATGGGTTCTGTTTAGAGACA+TGG | 0.490337 | 1.4:+72612268 | MS.gene20014:intron |
| CCTTGAATGGACCAAAATTG+AGG | 0.495563 | 1.4:+72603609 | MS.gene20014:CDS |
| GTAGCTGGGATGCCCTTGAA+TGG | 0.505594 | 1.4:+72603596 | MS.gene20014:CDS |
| GTCCCTGATGGCTGGCGCAT+TGG | 0.505641 | 1.4:-72612939 | None:intergenic |
| TGACTCCTCCACCGGTAGCT+GGG | 0.505756 | 1.4:+72603582 | MS.gene20014:CDS |
| GGGGCTAACGCTGCTGCTGG+GGG | 0.506577 | 1.4:-72615120 | None:intergenic |
| TCTGCTTCAGTATCAACCCT+TGG | 0.507545 | 1.4:+72612328 | MS.gene20014:CDS |
| GCTAATGGAGCCATGGGAGG+TGG | 0.510157 | 1.4:+72611526 | MS.gene20014:CDS |
| TGCAATGTGTTTGAAAGTTG+TGG | 0.511797 | 1.4:+72614994 | MS.gene20014:CDS |
| CCTCCATCTTTCGTACGAAA+CGG | 0.512251 | 1.4:-72615853 | None:intergenic |
| TACTTCAGTGGATCATAAAA+GGG | 0.512507 | 1.4:-72615081 | None:intergenic |
| GGCTGCAGGTGGCCAAATGG+TGG | 0.513018 | 1.4:+72615874 | MS.gene20014:CDS |
| TCATCCAATAATCGCACCAT+TGG | 0.515465 | 1.4:-72609058 | None:intergenic |
| AGCGTGCAATTCAGTCAATT+GGG | 0.518763 | 1.4:+72615623 | MS.gene20014:CDS |
| TGCATTAGCTAATGGAGCCA+TGG | 0.520047 | 1.4:+72611519 | MS.gene20014:CDS |
| TTTAGGAACTCAATTTACTT+GGG | 0.520091 | 1.4:-72615985 | None:intergenic |
| TGAAATTGGGGCCATATAGT+CGG | 0.520224 | 1.4:-72615141 | None:intergenic |
| GGAGGCTGCAGGTGGCCAAA+TGG | 0.523171 | 1.4:+72615871 | MS.gene20014:CDS |
| CCAAAGCAAATGGATAACTT+TGG | 0.523432 | 1.4:-72609204 | None:intergenic |
| GCAGAAAACTCAAACGCAAA+AGG | 0.523563 | 1.4:-72613942 | None:intergenic |
| GTACGAAAGATGGAGGCTGC+AGG | 0.523660 | 1.4:+72615860 | MS.gene20014:CDS |
| CCATATTATCGGACATTCAG+AGG | 0.523878 | 1.4:+72612612 | MS.gene20014:CDS |
| TCATGAGACCAACTAAAGGT+TGG | 0.524291 | 1.4:-72609547 | None:intergenic |
| TGCTAGTGGTATTGTTCCAA+GGG | 0.525165 | 1.4:-72607217 | None:intergenic |
| TAAAGATCCCATAATATTGT+GGG | 0.526056 | 1.4:-72608995 | None:intergenic |
| ACCAACACAAAGACTGCTGC+AGG | 0.527140 | 1.4:+72607925 | MS.gene20014:CDS |
| GGTGTGGCACGGTGGTGTCT+CGG | 0.527582 | 1.4:-72603535 | None:intergenic |
| TTCAAGGGCATCCCAGCTAC+CGG | 0.528328 | 1.4:-72603593 | None:intergenic |
| TTGCTAGTGGTATTGTTCCA+AGG | 0.536488 | 1.4:-72607218 | None:intergenic |
| TCACCCTGTCAAATGACTTG+TGG | 0.539321 | 1.4:+72609146 | MS.gene20014:CDS |
| CACCAATGCGCCAGCCATCA+GGG | 0.539335 | 1.4:+72612937 | MS.gene20014:CDS |
| TGCCCAGAAGAAGCACATAG+TGG | 0.542796 | 1.4:+72615177 | MS.gene20014:CDS |
| ACAGAAGATGACGGTGATGA+TGG | 0.543703 | 1.4:+72615793 | MS.gene20014:CDS |
| ATAAAGATCCCATAATATTG+TGG | 0.545906 | 1.4:-72608996 | None:intergenic |
| ACACCGTCTATCTCTGGAAG+TGG | 0.547187 | 1.4:+72612864 | MS.gene20014:CDS |
| AGCAAGAAATCAAGATTCGC+GGG | 0.549836 | 1.4:-72603734 | None:intergenic |
| TTCAGCATGCAATGATTGCA+TGG | 0.551343 | 1.4:-72615524 | None:intergenic |
| AAGATTCACATTTCTAGTAG+TGG | 0.553387 | 1.4:+72615649 | MS.gene20014:CDS |
| GCATTAGCTAATGGAGCCAT+GGG | 0.557242 | 1.4:+72611520 | MS.gene20014:CDS |
| GTTCCCACACGATCAGAAAA+CGG | 0.557307 | 1.4:-72612843 | None:intergenic |
| AATGACTTGTGGAGAATAAG+TGG | 0.557540 | 1.4:+72609157 | MS.gene20014:CDS |
| CTATGTGCATGAGATGGAGC+TGG | 0.559073 | 1.4:-72612969 | None:intergenic |
| GTGTCTCTTAGAGAGGTTGT+TGG | 0.559932 | 1.4:-72603556 | None:intergenic |
| AGGCTAAAGAAGTGGCAGAA+AGG | 0.561343 | 1.4:+72615479 | MS.gene20014:intron |
| CACTCATGGCAGAACATCAT+CGG | 0.561431 | 1.4:+72611750 | MS.gene20014:CDS |
| GCCCAGAAGAAGCACATAGT+GGG | 0.563525 | 1.4:+72615178 | MS.gene20014:CDS |
| GCTGATAGGCGGGCATCAGA+AGG | 0.564887 | 1.4:+72615036 | MS.gene20014:CDS |
| CTTGTCAATACAGATGATGC+AGG | 0.565899 | 1.4:+72606407 | MS.gene20014:CDS |
| GGGAGATTGAAGCACAATGT+AGG | 0.566070 | 1.4:+72615199 | MS.gene20014:CDS |
| GGTGGGTCGATATGGGGTGG+CGG | 0.570020 | 1.4:+72612289 | MS.gene20014:CDS |
| GCTCGATGACGAACAAGTTG+TGG | 0.571654 | 1.4:+72603754 | MS.gene20014:CDS |
| AATGGTGGTTGTGCTCAACT+AGG | 0.572409 | 1.4:+72615889 | MS.gene20014:CDS |
| CAACCCTTGGGGATAGTGGA+TGG | 0.573284 | 1.4:+72612341 | MS.gene20014:CDS |
| GGTGTTTACTTTCAGGGACA+CGG | 0.575985 | 1.4:+72606377 | MS.gene20014:intron |
| TGATTCTGAACCACCTCCCA+TGG | 0.576170 | 1.4:-72611536 | None:intergenic |
| ACCTGCAGCAGTCTTTGTGT+TGG | 0.577544 | 1.4:-72607926 | None:intergenic |
| TTGTATTGTTCCTCTAGGCA+AGG | 0.577976 | 1.4:+72615721 | MS.gene20014:CDS |
| TTGGTAGTGATGGATGGGAT+AGG | 0.578391 | 1.4:+72612550 | MS.gene20014:intron |
| AAGTGATGATGAAGTGCTCC+AGG | 0.578623 | 1.4:+72609352 | MS.gene20014:intron |
| AACTTCTCAATGGTTGCTAG+TGG | 0.579962 | 1.4:-72607231 | None:intergenic |
| GACATTGAAAACAACCCAGC+GGG | 0.581375 | 1.4:+72615685 | MS.gene20014:CDS |
| GGGCATACTTGGCTGATAGG+CGG | 0.581465 | 1.4:+72615025 | MS.gene20014:CDS |
| TTGGTCTCATGATGAATATG+AGG | 0.582357 | 1.4:+72609558 | MS.gene20014:CDS |
| ACCTCTTTGAGCCATCGTCA+AGG | 0.583283 | 1.4:-72610039 | None:intergenic |
| CAGGCAGACGGCATCTTGCA+CGG | 0.585052 | 1.4:-72609385 | None:intergenic |
| CTTTGTGGCAACCTTGACGA+TGG | 0.587381 | 1.4:+72610028 | MS.gene20014:CDS |
| CAAGTCATTTGACAGGGTGA+AGG | 0.587579 | 1.4:-72609143 | None:intergenic |
| GAGAGGTTGTTGGTGTGGCA+CGG | 0.588469 | 1.4:-72603546 | None:intergenic |
| GGTTCTGTTTAGAGACATGG+TGG | 0.592082 | 1.4:+72612271 | MS.gene20014:intron |
| AGTTTGGATGTGCTCCCGCT+GGG | 0.595582 | 1.4:-72615699 | None:intergenic |
| GAGCAAGAAATCAAGATTCG+CGG | 0.598188 | 1.4:-72603735 | None:intergenic |
| CATATTATCGGACATTCAGA+GGG | 0.598656 | 1.4:+72612613 | MS.gene20014:CDS |
| CGAGAATTCATAGACACTCA+TGG | 0.599136 | 1.4:+72611736 | MS.gene20014:CDS |
| TCTTAGAGAGGTTGTTGGTG+TGG | 0.603090 | 1.4:-72603551 | None:intergenic |
| TTCATCATGAGACCAACTAA+AGG | 0.603931 | 1.4:-72609551 | None:intergenic |
| GTCAGATGTGTCTCTTAGAG+AGG | 0.605249 | 1.4:-72603563 | None:intergenic |
| AGAGGACCACTGTACTTCAG+TGG | 0.607252 | 1.4:-72615093 | None:intergenic |
| GAGGTGTTCTTAAAAGTGGA+AGG | 0.610307 | 1.4:-72609034 | None:intergenic |
| CCTGAACTATGTGCATGAGA+TGG | 0.611367 | 1.4:-72612975 | None:intergenic |
| CGAAAGATGGAGGCTGCAGG+TGG | 0.612620 | 1.4:+72615863 | MS.gene20014:CDS |
| ACCAAGAAATTACAGGCAGA+CGG | 0.615128 | 1.4:-72609397 | None:intergenic |
| CATTATTAAGGCTTTCCTGG+TGG | 0.615141 | 1.4:+72614045 | MS.gene20014:intron |
| ATGGTAACAGGCTAAAGAAG+TGG | 0.615148 | 1.4:+72615471 | MS.gene20014:intron |
| GTCAAGGTTGCCACAAAGTG+CGG | 0.618707 | 1.4:-72610023 | None:intergenic |
| GCTGGAGGTAATGTCCCTGA+TGG | 0.619293 | 1.4:-72612951 | None:intergenic |
| AAGGGCATCCCAGCTACCGG+TGG | 0.625691 | 1.4:-72603590 | None:intergenic |
| CATGGCAGAACATCATCGGA+TGG | 0.626026 | 1.4:+72611754 | MS.gene20014:CDS |
| AGACATGGTGGGTCGATATG+GGG | 0.626724 | 1.4:+72612283 | MS.gene20014:CDS |
| GACACATCTGACTCCTCCAC+CGG | 0.627294 | 1.4:+72603574 | MS.gene20014:CDS |
| TGCAGTCTAAGAAGTCCACC+AGG | 0.629081 | 1.4:-72614060 | None:intergenic |
| ATAACCATCCACTATCCCCA+AGG | 0.631610 | 1.4:-72612345 | None:intergenic |
| GCTGGCGCATTGGTGATGAT+GGG | 0.632732 | 1.4:-72612929 | None:intergenic |
| TCAATGGACATGATTGAAAG+TGG | 0.636766 | 1.4:+72609118 | MS.gene20014:CDS |
| CATGGTGGGTCGATATGGGG+TGG | 0.639162 | 1.4:+72612286 | MS.gene20014:CDS |
| CAATAATCGCACCATTGGAG+AGG | 0.640586 | 1.4:-72609053 | None:intergenic |
| ATATCGCTGATGCGAGACCA+AGG | 0.640867 | 1.4:+72611491 | MS.gene20014:CDS |
| TCTCCACAAGTCATTTGACA+GGG | 0.643859 | 1.4:-72609149 | None:intergenic |
| GTCTCATGATGAATATGAGG+AGG | 0.645065 | 1.4:+72609561 | MS.gene20014:CDS |
| CCGTTTCGTACGAAAGATGG+AGG | 0.645973 | 1.4:+72615853 | MS.gene20014:CDS |
| CTTCTGGGCAAGCCCAACGA+AGG | 0.647320 | 1.4:-72615164 | None:intergenic |
| CAGCTATGAACACGGCAAAG+AGG | 0.651365 | 1.4:+72615575 | MS.gene20014:CDS |
| GATAGGCGGGCATCAGAAGG+AGG | 0.651664 | 1.4:+72615039 | MS.gene20014:CDS |
| CCCAGAAGAAGCACATAGTG+GGG | 0.655565 | 1.4:+72615179 | MS.gene20014:CDS |
| GCCCAACGAAGGTGAAATTG+GGG | 0.657364 | 1.4:-72615153 | None:intergenic |
| TTTCCACTTCCAGAGATAGA+CGG | 0.662759 | 1.4:-72612867 | None:intergenic |
| ACCTTGACGATGGCTCAAAG+AGG | 0.665568 | 1.4:+72610038 | MS.gene20014:CDS |
| TGCTTCAGTATCAACCCTTG+GGG | 0.671712 | 1.4:+72612330 | MS.gene20014:CDS |
| TTAGCTAATGGAGCCATGGG+AGG | 0.673806 | 1.4:+72611523 | MS.gene20014:CDS |
| TATGATCCACTGAAGTACAG+TGG | 0.674605 | 1.4:+72615087 | MS.gene20014:CDS |
| GAATATCTCAGCTATGAACA+CGG | 0.684929 | 1.4:+72615567 | MS.gene20014:CDS |
| ACTACTTGATCCTTGCCTAG+AGG | 0.684942 | 1.4:-72615731 | None:intergenic |
| TAACCATCCACTATCCCCAA+GGG | 0.687207 | 1.4:-72612344 | None:intergenic |
| ATGTCTGTAACAGAAGATGA+CGG | 0.688061 | 1.4:+72615784 | MS.gene20014:CDS |
| GTTCTGTTTAGAGACATGGT+GGG | 0.696169 | 1.4:+72612272 | MS.gene20014:intron |
| AAATTGGGGCCATATAGTCG+GGG | 0.720716 | 1.4:-72615139 | None:intergenic |
| TGTGCATGAGATGGAGCTGG+AGG | 0.734337 | 1.4:-72612966 | None:intergenic |
| AGGTTGTTGGTGTGGCACGG+TGG | 0.761595 | 1.4:-72603543 | None:intergenic |
| ATTGTGTGTCACAACTACTG+CGG | 0.765787 | 1.4:+72613913 | MS.gene20014:CDS |
| TGACATTGAAAACAACCCAG+CGG | 0.773121 | 1.4:+72615684 | MS.gene20014:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 72603526 | 72615993 | 72603526 | ID=MS.gene20014 |
| chr1.4 | mRNA | 72603526 | 72615993 | 72603526 | ID=MS.gene20014.t1;Parent=MS.gene20014 |
| chr1.4 | exon | 72603526 | 72603630 | 72603526 | ID=MS.gene20014.t1.exon1;Parent=MS.gene20014.t1 |
| chr1.4 | CDS | 72603526 | 72603630 | 72603526 | ID=cds.MS.gene20014.t1;Parent=MS.gene20014.t1 |
| chr1.4 | exon | 72603713 | 72603781 | 72603713 | ID=MS.gene20014.t1.exon2;Parent=MS.gene20014.t1 |
| chr1.4 | CDS | 72603713 | 72603781 | 72603713 | ID=cds.MS.gene20014.t1;Parent=MS.gene20014.t1 |
| chr1.4 | exon | 72606392 | 72606466 | 72606392 | ID=MS.gene20014.t1.exon3;Parent=MS.gene20014.t1 |
| chr1.4 | CDS | 72606392 | 72606466 | 72606392 | ID=cds.MS.gene20014.t1;Parent=MS.gene20014.t1 |
| chr1.4 | exon | 72607192 | 72607263 | 72607192 | ID=MS.gene20014.t1.exon4;Parent=MS.gene20014.t1 |
| chr1.4 | CDS | 72607192 | 72607263 | 72607192 | ID=cds.MS.gene20014.t1;Parent=MS.gene20014.t1 |
| chr1.4 | exon | 72607884 | 72607953 | 72607884 | ID=MS.gene20014.t1.exon5;Parent=MS.gene20014.t1 |
| chr1.4 | CDS | 72607884 | 72607953 | 72607884 | ID=cds.MS.gene20014.t1;Parent=MS.gene20014.t1 |
| chr1.4 | exon | 72608343 | 72608392 | 72608343 | ID=MS.gene20014.t1.exon6;Parent=MS.gene20014.t1 |
| chr1.4 | CDS | 72608343 | 72608392 | 72608343 | ID=cds.MS.gene20014.t1;Parent=MS.gene20014.t1 |
| chr1.4 | exon | 72608956 | 72609245 | 72608956 | ID=MS.gene20014.t1.exon7;Parent=MS.gene20014.t1 |
| chr1.4 | CDS | 72608956 | 72609245 | 72608956 | ID=cds.MS.gene20014.t1;Parent=MS.gene20014.t1 |
| chr1.4 | exon | 72609355 | 72609428 | 72609355 | ID=MS.gene20014.t1.exon8;Parent=MS.gene20014.t1 |
| chr1.4 | CDS | 72609355 | 72609428 | 72609355 | ID=cds.MS.gene20014.t1;Parent=MS.gene20014.t1 |
| chr1.4 | exon | 72609519 | 72609582 | 72609519 | ID=MS.gene20014.t1.exon9;Parent=MS.gene20014.t1 |
| chr1.4 | CDS | 72609519 | 72609582 | 72609519 | ID=cds.MS.gene20014.t1;Parent=MS.gene20014.t1 |
| chr1.4 | exon | 72610000 | 72610059 | 72610000 | ID=MS.gene20014.t1.exon10;Parent=MS.gene20014.t1 |
| chr1.4 | CDS | 72610000 | 72610059 | 72610000 | ID=cds.MS.gene20014.t1;Parent=MS.gene20014.t1 |
| chr1.4 | exon | 72611483 | 72611582 | 72611483 | ID=MS.gene20014.t1.exon11;Parent=MS.gene20014.t1 |
| chr1.4 | CDS | 72611483 | 72611582 | 72611483 | ID=cds.MS.gene20014.t1;Parent=MS.gene20014.t1 |
| chr1.4 | exon | 72611679 | 72611792 | 72611679 | ID=MS.gene20014.t1.exon12;Parent=MS.gene20014.t1 |
| chr1.4 | CDS | 72611679 | 72611792 | 72611679 | ID=cds.MS.gene20014.t1;Parent=MS.gene20014.t1 |
| chr1.4 | exon | 72612283 | 72612452 | 72612283 | ID=MS.gene20014.t1.exon13;Parent=MS.gene20014.t1 |
| chr1.4 | CDS | 72612283 | 72612452 | 72612283 | ID=cds.MS.gene20014.t1;Parent=MS.gene20014.t1 |
| chr1.4 | exon | 72612557 | 72612641 | 72612557 | ID=MS.gene20014.t1.exon14;Parent=MS.gene20014.t1 |
| chr1.4 | CDS | 72612557 | 72612641 | 72612557 | ID=cds.MS.gene20014.t1;Parent=MS.gene20014.t1 |
| chr1.4 | exon | 72612807 | 72613022 | 72612807 | ID=MS.gene20014.t1.exon15;Parent=MS.gene20014.t1 |
| chr1.4 | CDS | 72612807 | 72613022 | 72612807 | ID=cds.MS.gene20014.t1;Parent=MS.gene20014.t1 |
| chr1.4 | exon | 72613906 | 72613965 | 72613906 | ID=MS.gene20014.t1.exon16;Parent=MS.gene20014.t1 |
| chr1.4 | CDS | 72613906 | 72613965 | 72613906 | ID=cds.MS.gene20014.t1;Parent=MS.gene20014.t1 |
| chr1.4 | exon | 72614055 | 72614119 | 72614055 | ID=MS.gene20014.t1.exon17;Parent=MS.gene20014.t1 |
| chr1.4 | CDS | 72614055 | 72614119 | 72614055 | ID=cds.MS.gene20014.t1;Parent=MS.gene20014.t1 |
| chr1.4 | exon | 72614975 | 72615254 | 72614975 | ID=MS.gene20014.t1.exon18;Parent=MS.gene20014.t1 |
| chr1.4 | CDS | 72614975 | 72615254 | 72614975 | ID=cds.MS.gene20014.t1;Parent=MS.gene20014.t1 |
| chr1.4 | exon | 72615481 | 72615993 | 72615481 | ID=MS.gene20014.t1.exon19;Parent=MS.gene20014.t1 |
| chr1.4 | CDS | 72615481 | 72615993 | 72615481 | ID=cds.MS.gene20014.t1;Parent=MS.gene20014.t1 |
| Gene Sequence |
| Protein sequence |
