Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20788.t1 | RHN81055.1 | 91.6 | 701 | 54 | 2 | 1 | 698 | 1 | 699 | 0.00E+00 | 1207.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20788.t1 | F4HXL0 | 54.1 | 741 | 269 | 14 | 1 | 698 | 1 | 713 | 4.2e-199 | 696.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20788.t1 | A0A396JY70 | 91.6 | 701 | 54 | 2 | 1 | 698 | 1 | 699 | 0.0e+00 | 1207.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049283 | MS.gene20788 | 0.813533 | 2.44E-51 | -1.69E-46 |
| MS.gene04998 | MS.gene20788 | 0.812332 | 4.47E-51 | -1.69E-46 |
| MS.gene051226 | MS.gene20788 | 0.868783 | 5.05E-66 | -1.69E-46 |
| MS.gene054892 | MS.gene20788 | 0.825253 | 5.19E-54 | -1.69E-46 |
| MS.gene054893 | MS.gene20788 | 0.832524 | 9.00E-56 | -1.69E-46 |
| MS.gene05615 | MS.gene20788 | 0.81755 | 3.11E-52 | -1.69E-46 |
| MS.gene057093 | MS.gene20788 | 0.823293 | 1.50E-53 | -1.69E-46 |
| MS.gene057622 | MS.gene20788 | 0.803362 | 3.61E-49 | -1.69E-46 |
| MS.gene058095 | MS.gene20788 | 0.810691 | 1.02E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20788.t1 | MTR_1g087330 | 95.833 | 528 | 17 | 2 | 1 | 525 | 1 | 526 | 0.0 | 996 |
| MS.gene20788.t1 | MTR_7g109350 | 63.142 | 662 | 187 | 13 | 30 | 683 | 39 | 651 | 0.0 | 770 |
| MS.gene20788.t1 | MTR_7g117280 | 45.946 | 555 | 260 | 10 | 97 | 624 | 126 | 667 | 3.90e-150 | 452 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20788.t1 | AT1G02660 | 57.143 | 728 | 267 | 13 | 1 | 698 | 1 | 713 | 0.0 | 746 |
| MS.gene20788.t1 | AT3G62590 | 50.840 | 714 | 255 | 15 | 1 | 695 | 1 | 637 | 0.0 | 605 |
| MS.gene20788.t1 | AT3G61680 | 47.858 | 537 | 239 | 7 | 94 | 620 | 120 | 625 | 1.26e-150 | 452 |
| MS.gene20788.t1 | AT3G61680 | 47.858 | 537 | 239 | 7 | 94 | 620 | 120 | 625 | 1.26e-150 | 452 |
| MS.gene20788.t1 | AT3G61680 | 47.858 | 537 | 239 | 7 | 94 | 620 | 120 | 625 | 1.26e-150 | 452 |
Find 154 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACAAATTACCTTGATATT+TGG | 0.154361 | 1.2:+65625287 | None:intergenic |
| AGAAACCCTCCTTAGCATTT+TGG | 0.155210 | 1.2:+65625370 | None:intergenic |
| ATCCTATATCCACCATTATT+TGG | 0.160237 | 1.2:+65624383 | None:intergenic |
| GCAATTACCTCAAATTTAAT+TGG | 0.213954 | 1.2:+65623896 | None:intergenic |
| CCCTGCTAGGATGTTAATAT+TGG | 0.229996 | 1.2:-65622665 | MS.gene20788:CDS |
| TACGGATCTGGTTAAGTTCT+TGG | 0.252856 | 1.2:+65622905 | None:intergenic |
| GTCTCTCGACGACGCCGTTT+TGG | 0.268578 | 1.2:-65625645 | MS.gene20788:CDS |
| AATGCTAAGGAGGGTTTCTT+TGG | 0.270200 | 1.2:-65625366 | MS.gene20788:CDS |
| GATGTCACACTTGGGGAGTT+TGG | 0.270494 | 1.2:-65625321 | MS.gene20788:CDS |
| CCTGCTAGGATGTTAATATT+GGG | 0.281713 | 1.2:-65622664 | MS.gene20788:CDS |
| CTACTTCCTGTGATAACATT+TGG | 0.282356 | 1.2:-65623553 | MS.gene20788:CDS |
| TGCCTTGCGGCAGAAGATTA+TGG | 0.283373 | 1.2:+65623127 | None:intergenic |
| CAGGAAGAGAGTCCTTAAAA+AGG | 0.312198 | 1.2:-65622741 | MS.gene20788:CDS |
| TCCACCATTATTTGGCTCCT+TGG | 0.317715 | 1.2:+65624391 | None:intergenic |
| TTTAGGTGAGCATGAACTTC+TGG | 0.322356 | 1.2:+65623688 | None:intergenic |
| TTAAGTGACCGATCTGCTTA+TGG | 0.329267 | 1.2:-65622997 | MS.gene20788:CDS |
| CATTTCATATCATTCATCTA+AGG | 0.331288 | 1.2:+65622623 | None:intergenic |
| CTTGGTGAAAATTTCTCATC+TGG | 0.344080 | 1.2:+65623150 | None:intergenic |
| CTTGATATTTGGTATAGAAT+AGG | 0.352328 | 1.2:+65625298 | None:intergenic |
| GATACCCATTGGAATCTCTA+TGG | 0.358600 | 1.2:-65625700 | MS.gene20788:CDS |
| CATGTCATGATCTCTTTGTA+TGG | 0.368198 | 1.2:+65622963 | None:intergenic |
| AGGATGGGCAGAGAGAGAAT+TGG | 0.368257 | 1.2:-65625577 | MS.gene20788:CDS |
| AGCTTCTTGTCCGTGTCATT+AGG | 0.369839 | 1.2:+65623069 | None:intergenic |
| GGATGGGCAGAGAGAGAATT+GGG | 0.390719 | 1.2:-65625576 | MS.gene20788:CDS |
| CTCGCATCGATTTACGGATC+TGG | 0.403958 | 1.2:+65622893 | None:intergenic |
| CGCAGAAGTGGCATCTTTGA+TGG | 0.405975 | 1.2:-65624225 | MS.gene20788:CDS |
| CGTGCAACTTTCCGTTTCAC+TGG | 0.411226 | 1.2:-65623652 | MS.gene20788:CDS |
| CGTTTCACTGGACATTCCCT+TGG | 0.413018 | 1.2:-65623640 | MS.gene20788:CDS |
| CAACGCCAGTCACCGTTCTC+TGG | 0.414357 | 1.2:-65622775 | MS.gene20788:CDS |
| GACCGATCTGCTTATGGATC+TGG | 0.419315 | 1.2:-65622991 | MS.gene20788:CDS |
| CCCAATATTAACATCCTAGC+AGG | 0.442858 | 1.2:+65622664 | None:intergenic |
| TTGATACCAGCATTGTTGTT+GGG | 0.446372 | 1.2:-65622825 | MS.gene20788:CDS |
| TTCACGACCCACCGCACTTA+CGG | 0.447728 | 1.2:+65625763 | None:intergenic |
| ACATTCCCTTGGTGGAAGCT+TGG | 0.448070 | 1.2:-65623629 | MS.gene20788:CDS |
| GACAGCAGTGGTTGCGGCAA+AGG | 0.448188 | 1.2:-65624186 | MS.gene20788:CDS |
| ATTGTTCCTTCGATCTCCAT+TGG | 0.450078 | 1.2:-65625827 | MS.gene20788:CDS |
| TTCACTGGACATTCCCTTGG+TGG | 0.452430 | 1.2:-65623637 | MS.gene20788:CDS |
| GAAACCAAGGAGCCAAATAA+TGG | 0.453919 | 1.2:-65624395 | MS.gene20788:CDS |
| GGGAAACTCTTAAAACATTA+CGG | 0.455788 | 1.2:-65624512 | MS.gene20788:CDS |
| GTTCGGAGTCATTAGCATCT+TGG | 0.455806 | 1.2:-65623940 | MS.gene20788:CDS |
| GTTCAAGAACGTCAACTTTG+CGG | 0.456069 | 1.2:+65623041 | None:intergenic |
| CCTGCACGTGGCTTCGCGGC+AGG | 0.457427 | 1.2:+65623482 | None:intergenic |
| TTCTCTATTATCTTCCAAAA+CGG | 0.458755 | 1.2:+65625631 | None:intergenic |
| GTTCCTTCGATCTCCATTGG+TGG | 0.483103 | 1.2:-65625824 | MS.gene20788:CDS |
| ACACAAATAAATGCATGTGT+TGG | 0.484143 | 1.2:+65622698 | None:intergenic |
| CGCATCTACCGTAAGTGCGG+TGG | 0.485121 | 1.2:-65625771 | MS.gene20788:CDS |
| TGTTGGGAGGTCCATGGTAT+CGG | 0.485167 | 1.2:-65622809 | MS.gene20788:CDS |
| GTTATAGATGACGGTGAGGA+TGG | 0.490623 | 1.2:-65625593 | MS.gene20788:CDS |
| ACTTCTTCAAATGCAGCGGC+TGG | 0.497103 | 1.2:-65624281 | MS.gene20788:CDS |
| AGCCAAATAATGGTGGATAT+AGG | 0.497389 | 1.2:-65624385 | MS.gene20788:CDS |
| CTTAATATCTCAAGTGGATG+AGG | 0.501462 | 1.2:+65623015 | None:intergenic |
| GTTGATACCAGCATTGTTGT+TGG | 0.504284 | 1.2:-65622826 | MS.gene20788:CDS |
| ATTGCCTGCACGTGGCTTCG+CGG | 0.504752 | 1.2:+65623478 | None:intergenic |
| CCTGCCGCGAAGCCACGTGC+AGG | 0.508181 | 1.2:-65623482 | MS.gene20788:CDS |
| GTATATATGAGGCTGCTAAA+GGG | 0.510063 | 1.2:-65623729 | MS.gene20788:CDS |
| CACAAATAAATGCATGTGTT+GGG | 0.510490 | 1.2:+65622699 | None:intergenic |
| TTCAGTGACAGCAGTGGTTG+CGG | 0.512338 | 1.2:-65624192 | MS.gene20788:CDS |
| CTCGTTCGTCACCTTGCGAA+TGG | 0.517823 | 1.2:-65624124 | MS.gene20788:CDS |
| GGTATATATGAGGCTGCTAA+AGG | 0.517913 | 1.2:-65623730 | MS.gene20788:CDS |
| CATTGTTGTTGGGAGGTCCA+TGG | 0.518484 | 1.2:-65622815 | MS.gene20788:CDS |
| CAAGGGAATGTCCAGTGAAA+CGG | 0.522758 | 1.2:+65623641 | None:intergenic |
| CTATTCTATACCAAATATCA+AGG | 0.525327 | 1.2:-65625297 | MS.gene20788:intron |
| AATGTTTGGAAAGGGGAACA+AGG | 0.528089 | 1.2:-65625530 | MS.gene20788:CDS |
| ATCCTCACCGTCATCTATAA+CGG | 0.528135 | 1.2:+65625595 | None:intergenic |
| AAAATCTGAGAAAATTCCTC+AGG | 0.530787 | 1.2:-65624444 | MS.gene20788:CDS |
| AATCTTCTGCCGCAAGGCAG+TGG | 0.532114 | 1.2:-65623123 | MS.gene20788:CDS |
| AAGCTACTATACACACCAAT+GGG | 0.534284 | 1.2:-65623192 | MS.gene20788:CDS |
| CATATATACCTCTGTGCACA+AGG | 0.536219 | 1.2:+65623743 | None:intergenic |
| TTATGCCAGAGAACGGTGAC+TGG | 0.536435 | 1.2:+65622770 | None:intergenic |
| TCAAATGCAGCGGCTGGTGA+AGG | 0.538184 | 1.2:-65624275 | MS.gene20788:CDS |
| CTTCTGCGTTCATCATGTCA+AGG | 0.540763 | 1.2:+65624240 | None:intergenic |
| TTCTCTGGCATAATGAAGAC+AGG | 0.544083 | 1.2:-65622760 | MS.gene20788:CDS |
| AGAACGTCAACTTTGCGGCT+CGG | 0.546820 | 1.2:+65623046 | None:intergenic |
| AGAATCAGCAATTCACCCAT+TGG | 0.548209 | 1.2:+65623177 | None:intergenic |
| CTGCTAGGATGTTAATATTG+GGG | 0.549191 | 1.2:-65622663 | MS.gene20788:CDS |
| GGTTCCCCTTCCATCATGTG+TGG | 0.551578 | 1.2:-65623532 | MS.gene20788:CDS |
| CGCCTCCACACATGATGGAA+GGG | 0.552230 | 1.2:+65623527 | None:intergenic |
| ATGTGAAGAATGTTTGGAAA+GGG | 0.553617 | 1.2:-65625538 | MS.gene20788:CDS |
| TGCGGCAGAAGATTATGGCT+TGG | 0.555573 | 1.2:+65623132 | None:intergenic |
| CGGTCACTTAATATCTCAAG+TGG | 0.555750 | 1.2:+65623009 | None:intergenic |
| AGCAGTGGTTGCGGCAAAGG+AGG | 0.558429 | 1.2:-65624183 | MS.gene20788:CDS |
| GGCAAAGGAGGAAGTAAAGC+AGG | 0.560431 | 1.2:-65624171 | MS.gene20788:CDS |
| GGACCTCCCAACAACAATGC+TGG | 0.562296 | 1.2:+65622819 | None:intergenic |
| GCTGCATTTGAAGAAGTGAA+TGG | 0.563038 | 1.2:+65624287 | None:intergenic |
| CATGTGAAGAATGTTTGGAA+AGG | 0.563671 | 1.2:-65625539 | MS.gene20788:CDS |
| ATACCAGCATTGTTGTTGGG+AGG | 0.566961 | 1.2:-65622822 | MS.gene20788:CDS |
| GTATGCTCAGATGTCACACT+TGG | 0.567630 | 1.2:-65625330 | MS.gene20788:CDS |
| CAGAGAACGGTGACTGGCGT+TGG | 0.568268 | 1.2:+65622776 | None:intergenic |
| TGACATGATGAACGCAGAAG+TGG | 0.568983 | 1.2:-65624237 | MS.gene20788:CDS |
| CGATCTGCTTATGGATCTGG+AGG | 0.572142 | 1.2:-65622988 | MS.gene20788:CDS |
| TTTACTTGGTTATTGAGACA+TGG | 0.572898 | 1.2:+65623355 | None:intergenic |
| TTACTTGGTTATTGAGACAT+GGG | 0.574179 | 1.2:+65623356 | None:intergenic |
| TCTTTACTTTCGACTTCCTG+AGG | 0.574252 | 1.2:+65624428 | None:intergenic |
| CAAGGGAATCATGAAAGAGA+AGG | 0.574584 | 1.2:-65625512 | MS.gene20788:CDS |
| CTCACCGTCATCTATAACGG+TGG | 0.576554 | 1.2:+65625598 | None:intergenic |
| TTATAGATGACGGTGAGGAT+GGG | 0.579980 | 1.2:-65625592 | MS.gene20788:CDS |
| CGACGGAACAGAACGTTCAG+TGG | 0.580188 | 1.2:-65625671 | MS.gene20788:CDS |
| AGAGAAGCAAGAAGAAACCA+AGG | 0.581266 | 1.2:-65624408 | MS.gene20788:CDS |
| TCGCCTCCACACATGATGGA+AGG | 0.582366 | 1.2:+65623526 | None:intergenic |
| TCCATGGTATCGGTCAGTAT+CGG | 0.583827 | 1.2:-65622799 | MS.gene20788:CDS |
| GGGGAACCAAATGTTATCAC+AGG | 0.584190 | 1.2:+65623547 | None:intergenic |
| GCCGATACTGACCGATACCA+TGG | 0.588719 | 1.2:+65622798 | None:intergenic |
| GAGAGAAAAGACGCAAGGTA+TGG | 0.588772 | 1.2:-65622873 | MS.gene20788:CDS |
| GCATTATAATTGCCTGCACG+TGG | 0.590797 | 1.2:+65623470 | None:intergenic |
| GAAGCTACTATACACACCAA+TGG | 0.592530 | 1.2:-65623193 | MS.gene20788:CDS |
| TAGTGCCAAGCTTCCACCAA+GGG | 0.594028 | 1.2:+65623624 | None:intergenic |
| TGTGCACAGAGGTATATATG+AGG | 0.594337 | 1.2:-65623740 | MS.gene20788:CDS |
| GACACTCTACTTGAAAAGCT+TGG | 0.594758 | 1.2:-65623505 | MS.gene20788:CDS |
| CTCCAGATCCATAAGCAGAT+CGG | 0.594796 | 1.2:+65622989 | None:intergenic |
| AGCCATAATCTTCTGCCGCA+AGG | 0.595034 | 1.2:-65623129 | MS.gene20788:CDS |
| AACGTTCTGTTCCGTCGTTG+TGG | 0.595293 | 1.2:+65625677 | None:intergenic |
| ATGTTTGGAAAGGGGAACAA+GGG | 0.596462 | 1.2:-65625529 | MS.gene20788:CDS |
| TATGCTCAGATGTCACACTT+GGG | 0.597591 | 1.2:-65625329 | MS.gene20788:CDS |
| ACAGGAAGTAGAGAGGTGAT+TGG | 0.597627 | 1.2:+65623565 | None:intergenic |
| AGTGTCGCCTCCACACATGA+TGG | 0.598823 | 1.2:+65623522 | None:intergenic |
| AGAAAAGACGCAAGGTATGG+TGG | 0.599163 | 1.2:-65622870 | MS.gene20788:CDS |
| GCCTCCACACATGATGGAAG+GGG | 0.599219 | 1.2:+65623528 | None:intergenic |
| GTGGCCATAGAGATTCCAAT+GGG | 0.600305 | 1.2:+65625696 | None:intergenic |
| TCCCCTTCCATCATGTGTGG+AGG | 0.601542 | 1.2:-65623529 | MS.gene20788:CDS |
| GTCTTCATTATGCCAGAGAA+CGG | 0.604223 | 1.2:+65622763 | None:intergenic |
| CGCACTTACGGTAGATGCGG+TGG | 0.605825 | 1.2:+65625775 | None:intergenic |
| TGCTAGGATGTTAATATTGG+GGG | 0.605936 | 1.2:-65622662 | MS.gene20788:CDS |
| ACCAAGGAGCCAAATAATGG+TGG | 0.606415 | 1.2:-65624392 | MS.gene20788:CDS |
| ATTCACTTCTTCAAATGCAG+CGG | 0.610395 | 1.2:-65624285 | MS.gene20788:CDS |
| GCATCTACCGTAAGTGCGGT+GGG | 0.614606 | 1.2:-65625770 | MS.gene20788:CDS |
| GTGCAGATAAGATGCAGCAG+AGG | 0.621656 | 1.2:+65624331 | None:intergenic |
| GATCCACCAATGGAGATCGA+AGG | 0.628096 | 1.2:+65625821 | None:intergenic |
| ACTCGTCGCGGTAGTACAAG+AGG | 0.630459 | 1.2:+65622847 | None:intergenic |
| AATCTCTATGGCCACAACGA+CGG | 0.633455 | 1.2:-65625688 | MS.gene20788:CDS |
| TGTGGCCATAGAGATTCCAA+TGG | 0.646166 | 1.2:+65625695 | None:intergenic |
| TCGCAGATGAACCATTCGCA+AGG | 0.648265 | 1.2:+65624113 | None:intergenic |
| CACCGCATCTACCGTAAGTG+CGG | 0.649836 | 1.2:-65625774 | MS.gene20788:CDS |
| TGTATCTAAAGATCCACCAA+TGG | 0.652056 | 1.2:+65625811 | None:intergenic |
| ATGCTCAGATGTCACACTTG+GGG | 0.652908 | 1.2:-65625328 | MS.gene20788:CDS |
| AAAACCACCGTTATAGATGA+CGG | 0.656587 | 1.2:-65625602 | MS.gene20788:CDS |
| TGGATATAGGATAAGTGCAA+CGG | 0.659737 | 1.2:-65624372 | MS.gene20788:CDS |
| CACCGCACTTACGGTAGATG+CGG | 0.662356 | 1.2:+65625772 | None:intergenic |
| TTGGATGTCCTTGTGCACAG+AGG | 0.663273 | 1.2:-65623751 | MS.gene20788:CDS |
| AGATATAGACCACTGCCTTG+CGG | 0.663361 | 1.2:+65623114 | None:intergenic |
| CCAATATTAACATCCTAGCA+GGG | 0.667471 | 1.2:+65622665 | None:intergenic |
| GTGTCATTAGGTTCTGACAA+AGG | 0.671563 | 1.2:+65623081 | None:intergenic |
| CATGCTCACCTAAAATCTCG+AGG | 0.672833 | 1.2:-65623679 | MS.gene20788:CDS |
| TACTGATTCAGTGACAGCAG+TGG | 0.675088 | 1.2:-65624198 | MS.gene20788:CDS |
| GATGCGAGAGAAAAGACGCA+AGG | 0.678863 | 1.2:-65622878 | MS.gene20788:CDS |
| TGTTATCACAGGAAGTAGAG+AGG | 0.682469 | 1.2:+65623558 | None:intergenic |
| CACCGTTATAGATGACGGTG+AGG | 0.686310 | 1.2:-65625597 | MS.gene20788:CDS |
| TTTGTCAGAACCTAATGACA+CGG | 0.688799 | 1.2:-65623079 | MS.gene20788:CDS |
| TGTGAAGAATGTTTGGAAAG+GGG | 0.703391 | 1.2:-65625537 | MS.gene20788:CDS |
| GTAGTGCCAAGCTTCCACCA+AGG | 0.715098 | 1.2:+65623623 | None:intergenic |
| TCAAGTTTGTGATACTTGCG+CGG | 0.721242 | 1.2:-65625450 | MS.gene20788:CDS |
| ATCTGCGATGATAACCAGAG+TGG | 0.733794 | 1.2:-65624098 | MS.gene20788:CDS |
| TAATTGCAAGAAAATGCTCG+CGG | 0.749108 | 1.2:+65623433 | None:intergenic |
| ATGCTGGTATCAACTCGTCG+CGG | 0.755961 | 1.2:+65622835 | None:intergenic |
| GCTGAGAATGATGAAAACAA+CGG | 0.787436 | 1.2:-65625482 | MS.gene20788:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATTAAAAGACAAACTT+TGG | + | chr1.2:65623485-65623504 | None:intergenic | 15.0% |
| !!! | AAGAAAAAACATAAACTTTT+TGG | + | chr1.2:65625180-65625199 | None:intergenic | 15.0% |
| !!! | TATGTTTTTTCTTTATTGAT+AGG | - | chr1.2:65625187-65625206 | MS.gene20788:intron | 15.0% |
| !!! | TTTTTAAATTTTGGATCATT+CGG | - | chr1.2:65623270-65623289 | MS.gene20788:intron | 15.0% |
| !! | AAACAAATTACCTTGATATT+TGG | + | chr1.2:65623206-65623225 | None:intergenic | 20.0% |
| !! | AAACTATGTGTTTAAAAACT+GGG | - | chr1.2:65622640-65622659 | MS.gene20788:CDS | 20.0% |
| !!! | GCTTTATGGTTTTTAAATTT+TGG | - | chr1.2:65623261-65623280 | MS.gene20788:intron | 20.0% |
| !!! | TACAAGATTTTTTGTTATTC+AGG | - | chr1.2:65624415-65624434 | MS.gene20788:CDS | 20.0% |
| !!! | TATTTTGTTTTTATGTGATC+TGG | - | chr1.2:65623376-65623395 | MS.gene20788:CDS | 20.0% |
| !!! | TTTGTCTTTTAATTTTAGCA+TGG | - | chr1.2:65623488-65623507 | MS.gene20788:CDS | 20.0% |
| ! | AGAAAGAAAGAAACAAATCA+AGG | + | chr1.2:65623436-65623455 | None:intergenic | 25.0% |
| ! | ATCTTCAACTAATCAATGTT+TGG | + | chr1.2:65623412-65623431 | None:intergenic | 25.0% |
| ! | CTATTCTATACCAAATATCA+AGG | - | chr1.2:65623193-65623212 | MS.gene20788:CDS | 25.0% |
| ! | CTTGATATTTGGTATAGAAT+AGG | + | chr1.2:65623195-65623214 | None:intergenic | 25.0% |
| ! | GAAACTATGTGTTTAAAAAC+TGG | - | chr1.2:65622639-65622658 | MS.gene20788:CDS | 25.0% |
| ! | GAAATTTGATTATTTAGCCA+GGG | - | chr1.2:65623958-65623977 | MS.gene20788:intron | 25.0% |
| ! | GCAATTACCTCAAATTTAAT+TGG | + | chr1.2:65624597-65624616 | None:intergenic | 25.0% |
| ! | GTTTGTAAATTGTTCATTCA+TGG | - | chr1.2:65623335-65623354 | MS.gene20788:intron | 25.0% |
| ! | TGAAATTTGATTATTTAGCC+AGG | - | chr1.2:65623957-65623976 | MS.gene20788:intron | 25.0% |
| ! | TGGAAATCAGAACATATAAT+AGG | + | chr1.2:65623908-65623927 | None:intergenic | 25.0% |
| ! | TTCTCTATTATCTTCCAAAA+CGG | + | chr1.2:65622862-65622881 | None:intergenic | 25.0% |
| !! | ATTTAATTGGCTCAAAAAGT+AGG | + | chr1.2:65624584-65624603 | None:intergenic | 25.0% |
| !! | ATTTTCATTTAGATACCCAT+TGG | - | chr1.2:65622779-65622798 | MS.gene20788:CDS | 25.0% |
| !! | CTATAATCTGAATCTTTTGT+TGG | - | chr1.2:65623676-65623695 | MS.gene20788:CDS | 25.0% |
| !! | GAAAACAATGATTTTTGTGA+AGG | + | chr1.2:65622756-65622775 | None:intergenic | 25.0% |
| !! | TGATAAAGCGTTATTATGTA+GGG | - | chr1.2:65624528-65624547 | MS.gene20788:intron | 25.0% |
| !! | TTAGTTTCATATGCATTTTG+TGG | + | chr1.2:65623928-65623947 | None:intergenic | 25.0% |
| !! | TTGATAAAGCGTTATTATGT+AGG | - | chr1.2:65624527-65624546 | MS.gene20788:intron | 25.0% |
| !! | TTTTGAGCCAATTAAATTTG+AGG | - | chr1.2:65624587-65624606 | MS.gene20788:intron | 25.0% |
| !!! | AGATTTTTTGTTATTCAGGT+AGG | - | chr1.2:65624419-65624438 | MS.gene20788:CDS | 25.0% |
| !!! | AGTGTGATTTTTTACAACTA+TGG | - | chr1.2:65623780-65623799 | MS.gene20788:intron | 25.0% |
| !!! | ATTTTTTGTTATTCAGGTAG+GGG | - | chr1.2:65624421-65624440 | MS.gene20788:CDS | 25.0% |
| !!! | GATTTTTTGTTATTCAGGTA+GGG | - | chr1.2:65624420-65624439 | MS.gene20788:CDS | 25.0% |
| !!! | TACACATTTTTTTTTACCCA+GGG | - | chr1.2:65624715-65624734 | MS.gene20788:intron | 25.0% |
| !!! | TATGGATTGGTGTATTTATA+AGG | - | chr1.2:65623599-65623618 | MS.gene20788:CDS | 25.0% |
| !!! | TGATTTGTTTCTTTCTTTCT+TGG | - | chr1.2:65623436-65623455 | MS.gene20788:CDS | 25.0% |
| !!! | TTGTTTTTACTTGTGCTTTA+TGG | - | chr1.2:65623247-65623266 | MS.gene20788:intron | 25.0% |
| !!! | TTTTAGTTGATTCTTAGAGA+TGG | - | chr1.2:65623309-65623328 | MS.gene20788:intron | 25.0% |
| AAAATCTGAGAAAATTCCTC+AGG | - | chr1.2:65624046-65624065 | MS.gene20788:intron | 30.0% | |
| ACACAAATAAATGCATGTGT+TGG | + | chr1.2:65625795-65625814 | None:intergenic | 30.0% | |
| ATCCTATATCCACCATTATT+TGG | + | chr1.2:65624110-65624129 | None:intergenic | 30.0% | |
| ATCGCTAGAGAAAAAAGAAT+TGG | - | chr1.2:65624019-65624038 | MS.gene20788:intron | 30.0% | |
| ATGTGAAGAATGTTTGGAAA+GGG | - | chr1.2:65622952-65622971 | MS.gene20788:CDS | 30.0% | |
| ATTTACCATGTGTTGGATTA+TGG | - | chr1.2:65623581-65623600 | MS.gene20788:CDS | 30.0% | |
| CACAAATAAATGCATGTGTT+GGG | + | chr1.2:65625794-65625813 | None:intergenic | 30.0% | |
| CCATGTTGCAAAAATCTTAA+AGG | - | chr1.2:65625086-65625105 | MS.gene20788:intron | 30.0% | |
| GGGAAACTCTTAAAACATTA+CGG | - | chr1.2:65623978-65623997 | MS.gene20788:intron | 30.0% | |
| TATGTTAGGTGATTGATCTT+TGG | - | chr1.2:65623816-65623835 | MS.gene20788:intron | 30.0% | |
| TTACTTGGTTATTGAGACAT+GGG | + | chr1.2:65625137-65625156 | None:intergenic | 30.0% | |
| TTTACTTGGTTATTGAGACA+TGG | + | chr1.2:65625138-65625157 | None:intergenic | 30.0% | |
| ! | ACTCATTTTCCAAAATGCTA+AGG | - | chr1.2:65623111-65623130 | MS.gene20788:CDS | 30.0% |
| ! | ATTTTCCAAAATGCTAAGGA+GGG | - | chr1.2:65623115-65623134 | MS.gene20788:CDS | 30.0% |
| ! | CATAAACTTTTTGGATAAGC+AGG | + | chr1.2:65625171-65625190 | None:intergenic | 30.0% |
| ! | GCATTTTTGCGATTGAAATT+TGG | - | chr1.2:65623853-65623872 | MS.gene20788:intron | 30.0% |
| ! | TTGTTCATTCATGGTTTTTG+AGG | - | chr1.2:65623344-65623363 | MS.gene20788:intron | 30.0% |
| ! | TTTTGCATGTGAAGAATGTT+TGG | - | chr1.2:65622946-65622965 | MS.gene20788:CDS | 30.0% |
| !!! | AAGGTTTTAATTCATAACCC+TGG | - | chr1.2:65623618-65623637 | MS.gene20788:CDS | 30.0% |
| !!! | AGGTTTTAATTCATAACCCT+GGG | - | chr1.2:65623619-65623638 | MS.gene20788:CDS | 30.0% |
| !!! | ATTTTTTTTTACCCAGGGTT+TGG | - | chr1.2:65624720-65624739 | MS.gene20788:intron | 30.0% |
| !!! | CCTTTAAGATTTTTGCAACA+TGG | + | chr1.2:65625089-65625108 | None:intergenic | 30.0% |
| !!! | GTACACATTTTTTTTTACCC+AGG | - | chr1.2:65624714-65624733 | MS.gene20788:intron | 30.0% |
| !!! | TAATGTTTTAAGAGTTTCCC+TGG | + | chr1.2:65623978-65623997 | None:intergenic | 30.0% |
| AAAACCACCGTTATAGATGA+CGG | - | chr1.2:65622888-65622907 | MS.gene20788:CDS | 35.0% | |
| AAGCGTTATTATGTAGGGTT+CGG | - | chr1.2:65624533-65624552 | MS.gene20788:intron | 35.0% | |
| AAGCTACTATACACACCAAT+GGG | - | chr1.2:65625298-65625317 | MS.gene20788:CDS | 35.0% | |
| ACCGCAAACCTTTGATATAA+CGG | + | chr1.2:65623555-65623574 | None:intergenic | 35.0% | |
| AGTCCTTAAAAAGGTTTAGC+AGG | - | chr1.2:65625758-65625777 | MS.gene20788:CDS | 35.0% | |
| ATTCACTTCTTCAAATGCAG+CGG | - | chr1.2:65624205-65624224 | MS.gene20788:CDS | 35.0% | |
| CAAAAAATCTTGTACCACTC+TGG | + | chr1.2:65624409-65624428 | None:intergenic | 35.0% | |
| CATGTCATGATCTCTTTGTA+TGG | + | chr1.2:65625530-65625549 | None:intergenic | 35.0% | |
| CATGTGAAGAATGTTTGGAA+AGG | - | chr1.2:65622951-65622970 | MS.gene20788:CDS | 35.0% | |
| CCAATATTAACATCCTAGCA+GGG | + | chr1.2:65625828-65625847 | None:intergenic | 35.0% | |
| CCTGCTAGGATGTTAATATT+GGG | - | chr1.2:65625826-65625845 | MS.gene20788:CDS | 35.0% | |
| CTACTTCCTGTGATAACATT+TGG | - | chr1.2:65624937-65624956 | MS.gene20788:intron | 35.0% | |
| CTGCTAGGATGTTAATATTG+GGG | - | chr1.2:65625827-65625846 | MS.gene20788:CDS | 35.0% | |
| CTTAAACTTGTCGAGACAAT+GGG | - | chr1.2:65623652-65623671 | MS.gene20788:CDS | 35.0% | |
| CTTAATATCTCAAGTGGATG+AGG | + | chr1.2:65625478-65625497 | None:intergenic | 35.0% | |
| CTTGGTGAAAATTTCTCATC+TGG | + | chr1.2:65625343-65625362 | None:intergenic | 35.0% | |
| GAATGCTCATTGCTTATGTT+AGG | - | chr1.2:65623802-65623821 | MS.gene20788:intron | 35.0% | |
| GCTGAGAATGATGAAAACAA+CGG | - | chr1.2:65623008-65623027 | MS.gene20788:CDS | 35.0% | |
| GTATATATGAGGCTGCTAAA+GGG | - | chr1.2:65624761-65624780 | MS.gene20788:intron | 35.0% | |
| TAATTGCAAGAAAATGCTCG+CGG | + | chr1.2:65625060-65625079 | None:intergenic | 35.0% | |
| TGCTAGGATGTTAATATTGG+GGG | - | chr1.2:65625828-65625847 | MS.gene20788:CDS | 35.0% | |
| TGGATATAGGATAAGTGCAA+CGG | - | chr1.2:65624118-65624137 | MS.gene20788:CDS | 35.0% | |
| TGTATCTAAAGATCCACCAA+TGG | + | chr1.2:65622682-65622701 | None:intergenic | 35.0% | |
| TGTGAAGAATGTTTGGAAAG+GGG | - | chr1.2:65622953-65622972 | MS.gene20788:CDS | 35.0% | |
| TTAAACTTGTCGAGACAATG+GGG | - | chr1.2:65623653-65623672 | MS.gene20788:CDS | 35.0% | |
| TTAATTCATAACCCTGGGTA+GGG | - | chr1.2:65623624-65623643 | MS.gene20788:CDS | 35.0% | |
| TTGCTGATATTGCAGACTAT+AGG | - | chr1.2:65624613-65624632 | MS.gene20788:intron | 35.0% | |
| TTTAATTCATAACCCTGGGT+AGG | - | chr1.2:65623623-65623642 | MS.gene20788:CDS | 35.0% | |
| TTTGTCAGAACCTAATGACA+CGG | - | chr1.2:65625411-65625430 | MS.gene20788:CDS | 35.0% | |
| ! | AAGATTTTTGCAACATGGTC+AGG | + | chr1.2:65625084-65625103 | None:intergenic | 35.0% |
| ! | AAGCCTGCTAAACCTTTTTA+AGG | + | chr1.2:65625764-65625783 | None:intergenic | 35.0% |
| ! | AGATTTTTGCAACATGGTCA+GGG | + | chr1.2:65625083-65625102 | None:intergenic | 35.0% |
| ! | CATTTTCCAAAATGCTAAGG+AGG | - | chr1.2:65623114-65623133 | MS.gene20788:CDS | 35.0% |
| ! | CTTTCTTTCTTGGCTTGAAT+GGG | - | chr1.2:65623446-65623465 | MS.gene20788:CDS | 35.0% |
| ! | GCATTTTGCCGTTATATCAA+AGG | - | chr1.2:65623544-65623563 | MS.gene20788:CDS | 35.0% |
| ! | GTTTTATCCAAAGCTAAACG+AGG | + | chr1.2:65623740-65623759 | None:intergenic | 35.0% |
| ! | TCTTTCTTTCTTGGCTTGAA+TGG | - | chr1.2:65623445-65623464 | MS.gene20788:CDS | 35.0% |
| ! | TTGATACCAGCATTGTTGTT+GGG | - | chr1.2:65625665-65625684 | MS.gene20788:CDS | 35.0% |
| ! | TTTCTTTCTTGGCTTGAATG+GGG | - | chr1.2:65623447-65623466 | MS.gene20788:CDS | 35.0% |
| ! | TTTTCGTCACTATTGTCGAA+GGG | - | chr1.2:65624638-65624657 | MS.gene20788:intron | 35.0% |
| ! | TTTTTCGTCACTATTGTCGA+AGG | - | chr1.2:65624637-65624656 | MS.gene20788:intron | 35.0% |
| !! | AGCCAAATAATGGTGGATAT+AGG | - | chr1.2:65624105-65624124 | MS.gene20788:CDS | 35.0% |
| !!! | TTTTCTCTCGCATCGATTTA+CGG | + | chr1.2:65625606-65625625 | None:intergenic | 35.0% |
| AATGCTAAGGAGGGTTTCTT+TGG | - | chr1.2:65623124-65623143 | MS.gene20788:CDS | 40.0% | |
| AATGTTTGGAAAGGGGAACA+AGG | - | chr1.2:65622960-65622979 | MS.gene20788:CDS | 40.0% | |
| AGAATCAGCAATTCACCCAT+TGG | + | chr1.2:65625316-65625335 | None:intergenic | 40.0% | |
| AGAGAAGCAAGAAGAAACCA+AGG | - | chr1.2:65624082-65624101 | MS.gene20788:CDS | 40.0% | |
| ATCCTCACCGTCATCTATAA+CGG | + | chr1.2:65622898-65622917 | None:intergenic | 40.0% | |
| ATGTTTGGAAAGGGGAACAA+GGG | - | chr1.2:65622961-65622980 | MS.gene20788:CDS | 40.0% | |
| ATTGTTCCTTCGATCTCCAT+TGG | - | chr1.2:65622663-65622682 | MS.gene20788:CDS | 40.0% | |
| CAAGGGAATCATGAAAGAGA+AGG | - | chr1.2:65622978-65622997 | MS.gene20788:CDS | 40.0% | |
| CAGGAAGAGAGTCCTTAAAA+AGG | - | chr1.2:65625749-65625768 | MS.gene20788:CDS | 40.0% | |
| CATATATACCTCTGTGCACA+AGG | + | chr1.2:65624750-65624769 | None:intergenic | 40.0% | |
| CCAATCCATAATCCAACACA+TGG | + | chr1.2:65623589-65623608 | None:intergenic | 40.0% | |
| CCATGTGTTGGATTATGGAT+TGG | - | chr1.2:65623586-65623605 | MS.gene20788:CDS | 40.0% | |
| CCCAATATTAACATCCTAGC+AGG | + | chr1.2:65625829-65625848 | None:intergenic | 40.0% | |
| CCCTGCTAGGATGTTAATAT+TGG | - | chr1.2:65625825-65625844 | MS.gene20788:CDS | 40.0% | |
| CGGTCACTTAATATCTCAAG+TGG | + | chr1.2:65625484-65625503 | None:intergenic | 40.0% | |
| GAAACCAAGGAGCCAAATAA+TGG | - | chr1.2:65624095-65624114 | MS.gene20788:CDS | 40.0% | |
| GAAGCTACTATACACACCAA+TGG | - | chr1.2:65625297-65625316 | MS.gene20788:intron | 40.0% | |
| GACACTCTACTTGAAAAGCT+TGG | - | chr1.2:65624985-65625004 | MS.gene20788:intron | 40.0% | |
| GATACCCATTGGAATCTCTA+TGG | - | chr1.2:65622790-65622809 | MS.gene20788:CDS | 40.0% | |
| GCCGTTATATCAAAGGTTTG+CGG | - | chr1.2:65623551-65623570 | MS.gene20788:CDS | 40.0% | |
| GCTGCATTTGAAGAAGTGAA+TGG | + | chr1.2:65624206-65624225 | None:intergenic | 40.0% | |
| GCTTAAACTTGTCGAGACAA+TGG | - | chr1.2:65623651-65623670 | MS.gene20788:CDS | 40.0% | |
| GGTATATATGAGGCTGCTAA+AGG | - | chr1.2:65624760-65624779 | MS.gene20788:intron | 40.0% | |
| GTCTTCATTATGCCAGAGAA+CGG | + | chr1.2:65625730-65625749 | None:intergenic | 40.0% | |
| GTTCAAGAACGTCAACTTTG+CGG | + | chr1.2:65625452-65625471 | None:intergenic | 40.0% | |
| GTTGATACCAGCATTGTTGT+TGG | - | chr1.2:65625664-65625683 | MS.gene20788:CDS | 40.0% | |
| TACGGATCTGGTTAAGTTCT+TGG | + | chr1.2:65625588-65625607 | None:intergenic | 40.0% | |
| TAGGTGATTGATCTTTGGCT+TGG | - | chr1.2:65623821-65623840 | MS.gene20788:intron | 40.0% | |
| TATGCTCAGATGTCACACTT+GGG | - | chr1.2:65623161-65623180 | MS.gene20788:CDS | 40.0% | |
| TCAAGTTTGTGATACTTGCG+CGG | - | chr1.2:65623040-65623059 | MS.gene20788:CDS | 40.0% | |
| TCTTTACTTTCGACTTCCTG+AGG | + | chr1.2:65624065-65624084 | None:intergenic | 40.0% | |
| TGTTATCACAGGAAGTAGAG+AGG | + | chr1.2:65624935-65624954 | None:intergenic | 40.0% | |
| TTAAGTGACCGATCTGCTTA+TGG | - | chr1.2:65625493-65625512 | MS.gene20788:CDS | 40.0% | |
| TTCTCTGGCATAATGAAGAC+AGG | - | chr1.2:65625730-65625749 | MS.gene20788:CDS | 40.0% | |
| TTGCGCAATTTACCATGTGT+TGG | - | chr1.2:65623574-65623593 | MS.gene20788:CDS | 40.0% | |
| TTTAGGTGAGCATGAACTTC+TGG | + | chr1.2:65624805-65624824 | None:intergenic | 40.0% | |
| TTTCGTCACTATTGTCGAAG+GGG | - | chr1.2:65624639-65624658 | MS.gene20788:intron | 40.0% | |
| ! | AGAAACCCTCCTTAGCATTT+TGG | + | chr1.2:65623123-65623142 | None:intergenic | 40.0% |
| ! | AGGTGATTGATCTTTGGCTT+GGG | - | chr1.2:65623822-65623841 | MS.gene20788:intron | 40.0% |
| ! | GTGTCATTAGGTTCTGACAA+AGG | + | chr1.2:65625412-65625431 | None:intergenic | 40.0% |
| ! | TCTTAGTCCTCGTTTAGCTT+TGG | - | chr1.2:65623730-65623749 | MS.gene20788:CDS | 40.0% |
| ! | TGTGCACAGAGGTATATATG+AGG | - | chr1.2:65624750-65624769 | MS.gene20788:intron | 40.0% |
| ! | TTATAGATGACGGTGAGGAT+GGG | - | chr1.2:65622898-65622917 | MS.gene20788:CDS | 40.0% |
| ! | TTTTTGGATAAGCAGGAGTG+CGG | + | chr1.2:65625164-65625183 | None:intergenic | 40.0% |
| !! | TTGATCTTTGGCTTGGGATT+CGG | - | chr1.2:65623828-65623847 | MS.gene20788:intron | 40.0% |
| !!! | TGTTGCTTTTTTTCCCTGCT+AGG | - | chr1.2:65625812-65625831 | MS.gene20788:CDS | 40.0% |
| AATCTCTATGGCCACAACGA+CGG | - | chr1.2:65622802-65622821 | MS.gene20788:CDS | 45.0% | |
| ACAGGAAGTAGAGAGGTGAT+TGG | + | chr1.2:65624928-65624947 | None:intergenic | 45.0% | |
| ACCAAGGAGCCAAATAATGG+TGG | - | chr1.2:65624098-65624117 | MS.gene20788:CDS | 45.0% | |
| AGAAAAGACGCAAGGTATGG+TGG | - | chr1.2:65625620-65625639 | MS.gene20788:CDS | 45.0% | |
| AGATATAGACCACTGCCTTG+CGG | + | chr1.2:65625379-65625398 | None:intergenic | 45.0% | |
| ATCTGCGATGATAACCAGAG+TGG | - | chr1.2:65624392-65624411 | MS.gene20788:CDS | 45.0% | |
| ATGCTCAGATGTCACACTTG+GGG | - | chr1.2:65623162-65623181 | MS.gene20788:CDS | 45.0% | |
| CAAGGGAATGTCCAGTGAAA+CGG | + | chr1.2:65624852-65624871 | None:intergenic | 45.0% | |
| CATGCTCACCTAAAATCTCG+AGG | - | chr1.2:65624811-65624830 | MS.gene20788:intron | 45.0% | |
| CTCCAGATCCATAAGCAGAT+CGG | + | chr1.2:65625504-65625523 | None:intergenic | 45.0% | |
| CTTCTGCGTTCATCATGTCA+AGG | + | chr1.2:65624253-65624272 | None:intergenic | 45.0% | |
| GAGAGAAAAGACGCAAGGTA+TGG | - | chr1.2:65625617-65625636 | MS.gene20788:CDS | 45.0% | |
| GCATTATAATTGCCTGCACG+TGG | + | chr1.2:65625023-65625042 | None:intergenic | 45.0% | |
| GGGGAACCAAATGTTATCAC+AGG | + | chr1.2:65624946-65624965 | None:intergenic | 45.0% | |
| GTATGCTCAGATGTCACACT+TGG | - | chr1.2:65623160-65623179 | MS.gene20788:CDS | 45.0% | |
| GTGGCCATAGAGATTCCAAT+GGG | + | chr1.2:65622797-65622816 | None:intergenic | 45.0% | |
| GTTCGGAGTCATTAGCATCT+TGG | - | chr1.2:65624550-65624569 | MS.gene20788:intron | 45.0% | |
| TGACATGATGAACGCAGAAG+TGG | - | chr1.2:65624253-65624272 | MS.gene20788:CDS | 45.0% | |
| TGTGGCCATAGAGATTCCAA+TGG | + | chr1.2:65622798-65622817 | None:intergenic | 45.0% | |
| TTCGTCACTATTGTCGAAGG+GGG | - | chr1.2:65624640-65624659 | MS.gene20788:intron | 45.0% | |
| TTTAAGCGAAACCCTACCCA+GGG | + | chr1.2:65623638-65623657 | None:intergenic | 45.0% | |
| ! | AGCTTCTTGTCCGTGTCATT+AGG | + | chr1.2:65625424-65625443 | None:intergenic | 45.0% |
| ! | ATACCAGCATTGTTGTTGGG+AGG | - | chr1.2:65625668-65625687 | MS.gene20788:CDS | 45.0% |
| ! | CACGAGAACCTCGAGATTTT+AGG | + | chr1.2:65624822-65624841 | None:intergenic | 45.0% |
| ! | GTTATAGATGACGGTGAGGA+TGG | - | chr1.2:65622897-65622916 | MS.gene20788:CDS | 45.0% |
| ! | TCCACCATTATTTGGCTCCT+TGG | + | chr1.2:65624102-65624121 | None:intergenic | 45.0% |
| !! | TACTGATTCAGTGACAGCAG+TGG | - | chr1.2:65624292-65624311 | MS.gene20788:CDS | 45.0% |
| !! | TCCATGGTATCGGTCAGTAT+CGG | - | chr1.2:65625691-65625710 | MS.gene20788:CDS | 45.0% |
| !! | TTTTGGATAAGCAGGAGTGC+GGG | + | chr1.2:65625163-65625182 | None:intergenic | 45.0% |
| !! | GATATATAAATTATATTATT+TGG | - | chr1.2:65624464-65624483 | MS.gene20788:CDS | 5.0% |
| AACGTTCTGTTCCGTCGTTG+TGG | + | chr1.2:65622816-65622835 | None:intergenic | 50.0% | |
| ACATTCCCTTGGTGGAAGCT+TGG | - | chr1.2:65624861-65624880 | MS.gene20788:intron | 50.0% | |
| ACTTCTTCAAATGCAGCGGC+TGG | - | chr1.2:65624209-65624228 | MS.gene20788:CDS | 50.0% | |
| AGAACGTCAACTTTGCGGCT+CGG | + | chr1.2:65625447-65625466 | None:intergenic | 50.0% | |
| AGCCATAATCTTCTGCCGCA+AGG | - | chr1.2:65625361-65625380 | MS.gene20788:CDS | 50.0% | |
| AGGATGGGCAGAGAGAGAAT+TGG | - | chr1.2:65622913-65622932 | MS.gene20788:CDS | 50.0% | |
| ATGCTGGTATCAACTCGTCG+CGG | + | chr1.2:65625658-65625677 | None:intergenic | 50.0% | |
| CACAAGGACATCCAAACCCT+GGG | + | chr1.2:65624734-65624753 | None:intergenic | 50.0% | |
| CGATCTGCTTATGGATCTGG+AGG | - | chr1.2:65625502-65625521 | MS.gene20788:CDS | 50.0% | |
| CGCAGAAGTGGCATCTTTGA+TGG | - | chr1.2:65624265-65624284 | MS.gene20788:CDS | 50.0% | |
| CGTGCAACTTTCCGTTTCAC+TGG | - | chr1.2:65624838-65624857 | MS.gene20788:intron | 50.0% | |
| CGTTTCACTGGACATTCCCT+TGG | - | chr1.2:65624850-65624869 | MS.gene20788:intron | 50.0% | |
| CTCACCGTCATCTATAACGG+TGG | + | chr1.2:65622895-65622914 | None:intergenic | 50.0% | |
| GACCGATCTGCTTATGGATC+TGG | - | chr1.2:65625499-65625518 | MS.gene20788:CDS | 50.0% | |
| GATCCACCAATGGAGATCGA+AGG | + | chr1.2:65622672-65622691 | None:intergenic | 50.0% | |
| GATGCGAGAGAAAAGACGCA+AGG | - | chr1.2:65625612-65625631 | MS.gene20788:CDS | 50.0% | |
| GATGTCACACTTGGGGAGTT+TGG | - | chr1.2:65623169-65623188 | MS.gene20788:CDS | 50.0% | |
| GGATGGGCAGAGAGAGAATT+GGG | - | chr1.2:65622914-65622933 | MS.gene20788:CDS | 50.0% | |
| GGCAAAGGAGGAAGTAAAGC+AGG | - | chr1.2:65624319-65624338 | MS.gene20788:CDS | 50.0% | |
| GTGCAGATAAGATGCAGCAG+AGG | + | chr1.2:65624162-65624181 | None:intergenic | 50.0% | |
| GTTCCTTCGATCTCCATTGG+TGG | - | chr1.2:65622666-65622685 | MS.gene20788:CDS | 50.0% | |
| GTTTAAGCGAAACCCTACCC+AGG | + | chr1.2:65623639-65623658 | None:intergenic | 50.0% | |
| TAGTGCCAAGCTTCCACCAA+GGG | + | chr1.2:65624869-65624888 | None:intergenic | 50.0% | |
| TCGCAGATGAACCATTCGCA+AGG | + | chr1.2:65624380-65624399 | None:intergenic | 50.0% | |
| TCGTCACTATTGTCGAAGGG+GGG | - | chr1.2:65624641-65624660 | MS.gene20788:intron | 50.0% | |
| TGCCTTGCGGCAGAAGATTA+TGG | + | chr1.2:65625366-65625385 | None:intergenic | 50.0% | |
| TGCGGCAGAAGATTATGGCT+TGG | + | chr1.2:65625361-65625380 | None:intergenic | 50.0% | |
| TGTTGGGAGGTCCATGGTAT+CGG | - | chr1.2:65625681-65625700 | MS.gene20788:CDS | 50.0% | |
| TTATGCCAGAGAACGGTGAC+TGG | + | chr1.2:65625723-65625742 | None:intergenic | 50.0% | |
| TTCACTGGACATTCCCTTGG+TGG | - | chr1.2:65624853-65624872 | MS.gene20788:intron | 50.0% | |
| TTCAGTGACAGCAGTGGTTG+CGG | - | chr1.2:65624298-65624317 | MS.gene20788:CDS | 50.0% | |
| TTGGATGTCCTTGTGCACAG+AGG | - | chr1.2:65624739-65624758 | MS.gene20788:intron | 50.0% | |
| ! | CACCGTTATAGATGACGGTG+AGG | - | chr1.2:65622893-65622912 | MS.gene20788:CDS | 50.0% |
| ! | CATTGTTGTTGGGAGGTCCA+TGG | - | chr1.2:65625675-65625694 | MS.gene20788:CDS | 50.0% |
| ! | CTTTCTTGGCTTGAATGGGG+TGG | - | chr1.2:65623450-65623469 | MS.gene20788:CDS | 50.0% |
| !! | CTCGCATCGATTTACGGATC+TGG | + | chr1.2:65625600-65625619 | None:intergenic | 50.0% |
| AATCTTCTGCCGCAAGGCAG+TGG | - | chr1.2:65625367-65625386 | MS.gene20788:CDS | 55.0% | |
| ACTCGTCGCGGTAGTACAAG+AGG | + | chr1.2:65625646-65625665 | None:intergenic | 55.0% | |
| AGTGTCGCCTCCACACATGA+TGG | + | chr1.2:65624971-65624990 | None:intergenic | 55.0% | |
| CACCGCACTTACGGTAGATG+CGG | + | chr1.2:65622721-65622740 | None:intergenic | 55.0% | |
| CACCGCATCTACCGTAAGTG+CGG | - | chr1.2:65622716-65622735 | MS.gene20788:CDS | 55.0% | |
| CGACGGAACAGAACGTTCAG+TGG | - | chr1.2:65622819-65622838 | MS.gene20788:CDS | 55.0% | |
| CTCGTTCGTCACCTTGCGAA+TGG | - | chr1.2:65624366-65624385 | MS.gene20788:CDS | 55.0% | |
| GCACAAGGACATCCAAACCC+TGG | + | chr1.2:65624735-65624754 | None:intergenic | 55.0% | |
| GCATCTACCGTAAGTGCGGT+GGG | - | chr1.2:65622720-65622739 | MS.gene20788:CDS | 55.0% | |
| GCCGATACTGACCGATACCA+TGG | + | chr1.2:65625695-65625714 | None:intergenic | 55.0% | |
| GGACCTCCCAACAACAATGC+TGG | + | chr1.2:65625674-65625693 | None:intergenic | 55.0% | |
| GGTTCCCCTTCCATCATGTG+TGG | - | chr1.2:65624958-65624977 | MS.gene20788:intron | 55.0% | |
| GTAGTGCCAAGCTTCCACCA+AGG | + | chr1.2:65624870-65624889 | None:intergenic | 55.0% | |
| TCAAATGCAGCGGCTGGTGA+AGG | - | chr1.2:65624215-65624234 | MS.gene20788:CDS | 55.0% | |
| TCCCCTTCCATCATGTGTGG+AGG | - | chr1.2:65624961-65624980 | MS.gene20788:intron | 55.0% | |
| TTCACGACCCACCGCACTTA+CGG | + | chr1.2:65622730-65622749 | None:intergenic | 55.0% | |
| ! | CAGGAGTGCGGGACTTTACT+TGG | + | chr1.2:65625152-65625171 | None:intergenic | 55.0% |
| ! | CGCCTCCACACATGATGGAA+GGG | + | chr1.2:65624966-65624985 | None:intergenic | 55.0% |
| ! | GCCTCCACACATGATGGAAG+GGG | + | chr1.2:65624965-65624984 | None:intergenic | 55.0% |
| ! | TCGCCTCCACACATGATGGA+AGG | + | chr1.2:65624967-65624986 | None:intergenic | 55.0% |
| AGCAGTGGTTGCGGCAAAGG+AGG | - | chr1.2:65624307-65624326 | MS.gene20788:CDS | 60.0% | |
| ATTGCCTGCACGTGGCTTCG+CGG | + | chr1.2:65625015-65625034 | None:intergenic | 60.0% | |
| CAACGCCAGTCACCGTTCTC+TGG | - | chr1.2:65625715-65625734 | MS.gene20788:CDS | 60.0% | |
| CAGAGAACGGTGACTGGCGT+TGG | + | chr1.2:65625717-65625736 | None:intergenic | 60.0% | |
| CGCACTTACGGTAGATGCGG+TGG | + | chr1.2:65622718-65622737 | None:intergenic | 60.0% | |
| CGCATCTACCGTAAGTGCGG+TGG | - | chr1.2:65622719-65622738 | MS.gene20788:CDS | 60.0% | |
| GACAGCAGTGGTTGCGGCAA+AGG | - | chr1.2:65624304-65624323 | MS.gene20788:CDS | 60.0% | |
| ! | GTCTCTCGACGACGCCGTTT+TGG | - | chr1.2:65622845-65622864 | MS.gene20788:CDS | 60.0% |
| CCTGCACGTGGCTTCGCGGC+AGG | + | chr1.2:65625011-65625030 | None:intergenic | 75.0% | |
| CCTGCCGCGAAGCCACGTGC+AGG | - | chr1.2:65625008-65625027 | MS.gene20788:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 65622636 | 65625876 | 65622636 | ID=MS.gene20788 |
| chr1.2 | mRNA | 65622636 | 65625876 | 65622636 | ID=MS.gene20788.t1;Parent=MS.gene20788 |
| chr1.2 | exon | 65625298 | 65625876 | 65625298 | ID=MS.gene20788.t1.exon1;Parent=MS.gene20788.t1 |
| chr1.2 | CDS | 65625298 | 65625876 | 65625298 | ID=cds.MS.gene20788.t1;Parent=MS.gene20788.t1 |
| chr1.2 | exon | 65624076 | 65624537 | 65624076 | ID=MS.gene20788.t1.exon2;Parent=MS.gene20788.t1 |
| chr1.2 | CDS | 65624076 | 65624537 | 65624076 | ID=cds.MS.gene20788.t1;Parent=MS.gene20788.t1 |
| chr1.2 | exon | 65623904 | 65623963 | 65623904 | ID=MS.gene20788.t1.exon3;Parent=MS.gene20788.t1 |
| chr1.2 | CDS | 65623904 | 65623963 | 65623904 | ID=cds.MS.gene20788.t1;Parent=MS.gene20788.t1 |
| chr1.2 | exon | 65623360 | 65623776 | 65623360 | ID=MS.gene20788.t1.exon4;Parent=MS.gene20788.t1 |
| chr1.2 | CDS | 65623360 | 65623776 | 65623360 | ID=cds.MS.gene20788.t1;Parent=MS.gene20788.t1 |
| chr1.2 | exon | 65622636 | 65623214 | 65622636 | ID=MS.gene20788.t1.exon5;Parent=MS.gene20788.t1 |
| chr1.2 | CDS | 65622636 | 65623214 | 65622636 | ID=cds.MS.gene20788.t1;Parent=MS.gene20788.t1 |
| Gene Sequence |
| Protein sequence |
