AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene22024

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene22024.t1 MTR_3g048950 97.441 508 13 0 1 508 1 508 0.0 1010
MS.gene22024.t1 MTR_2g010180 33.333 450 253 10 90 529 179 591 1.33e-46 172
MS.gene22024.t1 MTR_2g010180 33.630 449 250 12 90 527 193 604 8.28e-46 170
MS.gene22024.t1 MTR_2g010180 33.630 449 250 12 90 527 179 590 1.15e-45 169
MS.gene22024.t1 MTR_3g096980 31.360 456 254 13 78 515 174 588 3.23e-45 168
MS.gene22024.t1 MTR_8g094740 30.717 446 257 12 85 515 181 589 2.63e-40 154
MS.gene22024.t1 MTR_8g080890 33.935 277 174 5 46 316 45 318 1.01e-35 140
MS.gene22024.t1 MTR_8g080870 34.444 270 166 5 46 308 15 280 1.16e-33 134
MS.gene22024.t1 MTR_8g094740 30.077 389 237 8 85 472 181 535 2.10e-33 134
MS.gene22024.t1 MTR_8g080840 29.851 335 216 6 46 364 44 375 3.23e-33 133
MS.gene22024.t1 MTR_8g080880 33.094 278 175 5 46 316 44 317 2.64e-32 130
MS.gene22024.t1 MTR_8g097220 30.719 306 194 6 17 316 21 314 5.20e-32 129
MS.gene22024.t1 MTR_4g074030 33.453 278 176 5 37 308 29 303 8.26e-32 129
MS.gene22024.t1 MTR_8g095600 30.612 245 154 4 43 282 163 396 4.97e-29 120
MS.gene22024.t1 MTR_8g095600 30.612 245 154 4 43 282 163 396 1.67e-28 120
MS.gene22024.t1 MTR_8g095600 30.612 245 154 4 43 282 163 396 2.04e-28 119
MS.gene22024.t1 MTR_8g095600 30.612 245 154 4 43 282 179 412 2.06e-28 119
MS.gene22024.t1 MTR_1g082750 46.429 112 60 0 141 252 63 174 7.60e-23 101
MS.gene22024.t1 MTR_4g094205 46.078 102 55 0 151 252 119 220 2.95e-19 91.7
MS.gene22024.t1 MTR_8g107280 41.818 110 64 0 143 252 101 210 6.44e-12 68.2
MS.gene22024.t1 MTR_8g107280 41.441 111 65 0 143 253 101 211 8.00e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene22024.t1 AT3G25660 73.581 511 128 3 3 508 1 509 0.0 734
MS.gene22024.t1 AT5G64440 28.842 475 288 11 48 508 139 577 1.84e-44 166
MS.gene22024.t1 AT4G34880 27.366 486 291 14 43 508 45 488 6.94e-27 114
MS.gene22024.t1 AT5G07360 29.461 241 156 3 43 278 205 436 2.76e-26 113
MS.gene22024.t1 AT5G07360 29.461 241 156 3 43 278 205 436 2.76e-26 113
MS.gene22024.t1 AT5G07360 29.461 241 149 4 43 278 205 429 1.22e-24 108
MS.gene22024.t1 AT1G08980 45.299 117 64 0 141 257 64 180 3.91e-22 99.4
MS.gene22024.t1 AT5G09420 36.196 163 98 3 151 313 117 273 2.61e-19 92.0
MS.gene22024.t1 AT4G34880 23.750 480 270 15 43 508 45 442 7.27e-17 83.6
MS.gene22024.t1 AT3G17970 41.905 105 61 0 149 253 102 206 8.83e-16 80.5
MS.gene22024.t1 AT3G17970 42.308 104 60 0 149 252 102 205 1.11e-15 80.5

Find 188 sgRNAs with CRISPR-Local

Find 404 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTGAAGCTTCTGCATTTC+AGG 0.094048 3.3:-40518423 MS.gene22024:intron
CCAACCCGTGGGATGTTAAT+AGG 0.184295 3.3:-40516724 MS.gene22024:CDS
CCTTCAGCTGCTTATAAAAT+TGG 0.189323 3.3:-40514987 MS.gene22024:intron
GTCAAAATGAGATAGAAAAT+TGG 0.232450 3.3:+40516192 None:intergenic
CTTGATGCCATTGGCTGCTT+TGG 0.241283 3.3:-40516521 MS.gene22024:CDS
GAGGAAGTTGGTCCTCTTGC+TGG 0.242177 3.3:-40518623 MS.gene22024:CDS
CTTGAAGCTATTCCTTATAA+TGG 0.275796 3.3:+40515052 None:intergenic
GGTTCATCTGTCGCTGATGC+TGG 0.285798 3.3:-40516500 MS.gene22024:CDS
TGTTGTTGGGAAGACGAATA+TGG 0.330954 3.3:-40518468 MS.gene22024:CDS
CCATGTGGATTTATTGAGAA+TGG 0.335224 3.3:-40513998 MS.gene22024:CDS
TGTCTCGCTATGATGGTATT+AGG 0.343270 3.3:-40515822 MS.gene22024:intron
TGGTGTTCTTGTTGCTGTTA+AGG 0.344765 3.3:-40518603 MS.gene22024:CDS
TATGGGCGCGTCTCAAGATT+TGG 0.346456 3.3:-40516566 MS.gene22024:CDS
CCCTTGAAAGGACTGAGAAT+TGG 0.350069 3.3:-40516145 MS.gene22024:CDS
CCTGTTGGCCTGCAAATGAT+TGG 0.354266 3.3:-40513962 MS.gene22024:CDS
TGGTGAGAAGGGAGTGGCGG+AGG 0.367615 3.3:+40518792 None:intergenic
ATTCTCCTCCATGCAATTGC+TGG 0.372958 3.3:-40516476 MS.gene22024:CDS
GAAGGGAGTGGCGGAGGGTG+AGG 0.374672 3.3:+40518798 None:intergenic
ATTGGTCGGAAGGGAGGTGG+AGG 0.381354 3.3:+40518693 None:intergenic
GGTGGAGGAAGGAACGGAGG+TGG 0.388259 3.3:+40518708 None:intergenic
ATGCTGCACCAATCATTTGC+AGG 0.388800 3.3:+40513954 None:intergenic
AAGACGAATATGGATGAGTT+TGG 0.396095 3.3:-40518458 MS.gene22024:CDS
GGGGTGCGGTTGTAGGTTGG+GGG 0.400004 3.3:+40518831 None:intergenic
CGGTGAGACGGAGGCGGGTG+AGG 0.400218 3.3:+40518735 None:intergenic
GGGATTGGTCGGAAGGGAGG+TGG 0.402642 3.3:+40518690 None:intergenic
GAGTTGGGTGGGATTGTTGT+TGG 0.403136 3.3:-40518482 MS.gene22024:CDS
AACAGGTGAGAACCATTATA+AGG 0.404504 3.3:-40515064 MS.gene22024:intron
CGGAGAGGGTGTTGGTGAGA+AGG 0.409143 3.3:+40518780 None:intergenic
TCAAAATGAGATAGAAAATT+GGG 0.409705 3.3:+40516193 None:intergenic
GAGGGTGAGGATTTGAGAGG+GGG 0.409941 3.3:+40518811 None:intergenic
ACCAATTCTCAGTCCTTTCA+AGG 0.410994 3.3:+40516144 None:intergenic
AGAGAGTGGAACGTGGGGTT+TGG 0.412341 3.3:+40518906 None:intergenic
GGAGAGGGTGTTGGTGAGAA+GGG 0.413113 3.3:+40518781 None:intergenic
GAAGGAACGGAGGTGGGGTT+CGG 0.415482 3.3:+40518715 None:intergenic
CAACCCGTGGGATGTTAATA+GGG 0.416432 3.3:-40516723 MS.gene22024:CDS
GTAGGTTTGAAGCCAACATA+TGG 0.418336 3.3:-40516584 MS.gene22024:CDS
GGGGTTCGGTGAGACGGAGG+CGG 0.420001 3.3:+40518729 None:intergenic
AACTGCAGCTGCCGATCCTC+CGG 0.421581 3.3:+40516685 None:intergenic
AGTTGGGTGGGATTGTTGTT+GGG 0.424283 3.3:-40518481 MS.gene22024:CDS
CCAATCATTTGCAGGCCAAC+AGG 0.424765 3.3:+40513962 None:intergenic
GTGGAGGAAGGAACGGAGGT+GGG 0.435354 3.3:+40518709 None:intergenic
GAATCCCGAGCCAAAGGGTT+AGG 0.438985 3.3:-40515615 MS.gene22024:CDS
GATCCTCCGGATGATCCTCC+TGG 0.440465 3.3:+40516698 None:intergenic
TACACTAAACTTCGTGTTGA+CGG 0.440960 3.3:-40513902 MS.gene22024:CDS
ACACTAAACTTCGTGTTGAC+GGG 0.441732 3.3:-40513901 MS.gene22024:CDS
GGAGGTGGAGGAAGGAACGG+AGG 0.445202 3.3:+40518705 None:intergenic
GGGGTGTGTGAGAGTAGCTT+GGG 0.445406 3.3:+40518850 None:intergenic
CGAGGATACTTGAGGGTTAT+CGG 0.452203 3.3:-40518541 MS.gene22024:CDS
GACGAGCTAGACTCTCTCTA+TGG 0.455499 3.3:-40515639 MS.gene22024:CDS
TGAGACGGAGGCGGGTGAGG+TGG 0.460578 3.3:+40518738 None:intergenic
GTTCATCTGTCGCTGATGCT+GGG 0.461237 3.3:-40516499 MS.gene22024:CDS
CTAGCTCGTCAGCATAAACT+TGG 0.463059 3.3:+40515652 None:intergenic
GGGACATATGCCCTTTCAGC+TGG 0.466577 3.3:-40515417 MS.gene22024:CDS
TAGGTAAATGTCAACCTAGC+TGG 0.467203 3.3:-40514040 MS.gene22024:CDS
AGAACCTAACCCTTTGGCTC+GGG 0.470303 3.3:+40515611 None:intergenic
AGTAGCTTGGGTGGTGATGG+TGG 0.470306 3.3:+40518862 None:intergenic
GTGAGGAGAGTTAAGGAGTT+GGG 0.470550 3.3:-40518497 MS.gene22024:CDS
TACCTCAGAACCTAACCCTT+TGG 0.473794 3.3:+40515605 None:intergenic
CTCGACCGCAGAATCGCTGC+GGG 0.473891 3.3:-40518647 MS.gene22024:CDS
GTATCGTTGGGAAGTGATAC+TGG 0.476953 3.3:-40516644 MS.gene22024:CDS
GAGAGTAGCTTGGGTGGTGA+TGG 0.480412 3.3:+40518859 None:intergenic
GTCGGTGGCGGAGAGGGTGT+TGG 0.480489 3.3:+40518772 None:intergenic
TCCAACTTGTCTCGCTATGA+TGG 0.480589 3.3:-40515829 MS.gene22024:CDS
GGAGGGTGAGGATTTGAGAG+GGG 0.482570 3.3:+40518810 None:intergenic
CGGCAGCTGCAGTTTCTGCC+AGG 0.482964 3.3:-40516676 MS.gene22024:CDS
CTCACCGCCGTCGCATCAAA+CGG 0.483630 3.3:+40518515 None:intergenic
GGGTTCGGTGAGACGGAGGC+GGG 0.484229 3.3:+40518730 None:intergenic
TGGGTGGTGATGGTGGATGA+TGG 0.484855 3.3:+40518869 None:intergenic
GAGACGGAGGCGGGTGAGGT+GGG 0.484958 3.3:+40518739 None:intergenic
GGAACGTGGGGTTTGGAGTG+TGG 0.485069 3.3:+40518913 None:intergenic
CGACCAATCCCTCATCGCTC+AGG 0.485938 3.3:-40518678 MS.gene22024:CDS
TGGTGATGGTGGATGATGGA+AGG 0.487720 3.3:+40518873 None:intergenic
TGCTGGCAACCCAAGTGAAA+AGG 0.489336 3.3:+40515882 None:intergenic
GAATATGGATGAGTTTGGTA+TGG 0.494732 3.3:-40518453 MS.gene22024:CDS
ATTGAAGATGGTGTTGATGC+TGG 0.494844 3.3:-40516106 MS.gene22024:CDS
CAACGATACAACACATTGCC+TGG 0.499311 3.3:+40516658 None:intergenic
TGGGATGTTAATAGGGTGCC+AGG 0.501326 3.3:-40516716 MS.gene22024:CDS
TAAGCAGCTGAAGGAGCTGC+AGG 0.503173 3.3:+40514996 None:intergenic
CCGCAGCGATTCTGCGGTCG+AGG 0.503214 3.3:+40518648 None:intergenic
GGAGGTGGGGTTCGGTGAGA+CGG 0.506358 3.3:+40518723 None:intergenic
GGGTGTTGGTGAGAAGGGAG+TGG 0.507696 3.3:+40518786 None:intergenic
AGGGTGCCAGGAGGATCATC+CGG 0.508700 3.3:-40516704 MS.gene22024:CDS
GGTGGGGTTCGGTGAGACGG+AGG 0.508984 3.3:+40518726 None:intergenic
TCGGCCGCCGTTTGATGCGA+CGG 0.509581 3.3:-40518522 MS.gene22024:CDS
CATTATAAGGAATAGCTTCA+AGG 0.510073 3.3:-40515051 MS.gene22024:CDS
GGTGAGAAGGGAGTGGCGGA+GGG 0.510097 3.3:+40518793 None:intergenic
GCGGAGGGTGAGGATTTGAG+AGG 0.510822 3.3:+40518808 None:intergenic
CCTAGCTGGACTACCTGCCT+TGG 0.511239 3.3:-40514026 MS.gene22024:CDS
GTGCCTGAGCGATGAGGGAT+TGG 0.513135 3.3:+40518675 None:intergenic
ATCATAGTAACCAGCTGAAA+GGG 0.518202 3.3:+40515407 None:intergenic
ATTCGTGAAACTATTGAAGA+TGG 0.519456 3.3:-40516118 MS.gene22024:CDS
GAATAGCTTCAAGGAAGCGC+TGG 0.521105 3.3:-40515042 MS.gene22024:CDS
TTGGAAAGTAAGCCCTTGAA+AGG 0.521290 3.3:-40516157 MS.gene22024:CDS
GTGTGTGAGAGTAGCTTGGG+TGG 0.521382 3.3:+40518853 None:intergenic
AATGAGGTCGGTGGCGGAGA+GGG 0.521708 3.3:+40518766 None:intergenic
TGGAGGAAGGAACGGAGGTG+GGG 0.527467 3.3:+40518710 None:intergenic
CCAATTCTCAGTCCTTTCAA+GGG 0.528903 3.3:+40516145 None:intergenic
AGGAGGATCATCCGGAGGAT+CGG 0.529125 3.3:-40516696 MS.gene22024:CDS
ATATTACAAACGAGCGCAGC+AGG 0.530821 3.3:-40515382 MS.gene22024:intron
GCTGACATGCCGTCGACTGG+TGG 0.531775 3.3:-40518566 MS.gene22024:CDS
CTTGAGACGCGCCCATATGT+TGG 0.532165 3.3:+40516572 None:intergenic
GTCATGTGCCTGAGCGATGA+GGG 0.532809 3.3:+40518670 None:intergenic
CGTCTCAAGATTTGGACTCA+TGG 0.533310 3.3:-40516558 MS.gene22024:CDS
GGGAAATCAAGATATCATAT+TGG 0.533729 3.3:+40515018 None:intergenic
CGGAGGGTGAGGATTTGAGA+GGG 0.535379 3.3:+40518809 None:intergenic
CACTAAACTTCGTGTTGACG+GGG 0.536615 3.3:-40513900 MS.gene22024:CDS
GGATCGACTGGCCTTCCTGT+TGG 0.537162 3.3:-40513977 MS.gene22024:CDS
AAGGGAGAAGCGTGAGAGAG+TGG 0.537183 3.3:+40518892 None:intergenic
ACCATCATAGCGAGACAAGT+TGG 0.538119 3.3:+40515828 None:intergenic
TGCCGTCGACTGGTGGGTCG+AGG 0.539238 3.3:-40518559 MS.gene22024:CDS
CATCATAGTAACCAGCTGAA+AGG 0.540452 3.3:+40515406 None:intergenic
GGATTGAATGAGGTCGGTGG+CGG 0.541744 3.3:+40518760 None:intergenic
TATCATGACCAGCAATTGCA+TGG 0.543365 3.3:+40516468 None:intergenic
TGTTGGTGAGAAGGGAGTGG+CGG 0.543948 3.3:+40518789 None:intergenic
TAGGTTTGAAGCCAACATAT+GGG 0.545372 3.3:-40516583 MS.gene22024:CDS
GGAGAGTTAAGGAGTTGGGT+GGG 0.545543 3.3:-40518493 MS.gene22024:CDS
CAGAACCTAACCCTTTGGCT+CGG 0.546221 3.3:+40515610 None:intergenic
TGGTGGAAGTGTGAGGCAGC+CGG 0.546383 3.3:-40516624 MS.gene22024:CDS
CGATGAGGGATTGGTCGGAA+GGG 0.546485 3.3:+40518684 None:intergenic
GATCCTTTGGCTATGTATGC+TGG 0.549623 3.3:-40514867 MS.gene22024:CDS
AATATGGATGAGTTTGGTAT+GGG 0.549939 3.3:-40518452 MS.gene22024:CDS
GGCACCCTATTAACATCCCA+CGG 0.550526 3.3:+40516719 None:intergenic
AAGGGAGGTGGAGGAAGGAA+CGG 0.550801 3.3:+40518702 None:intergenic
TGATGCCACATCAAGTAAGC+AGG 0.552918 3.3:-40516441 MS.gene22024:intron
ACGGCTGACATGCCGTCGAC+TGG 0.553025 3.3:-40518569 MS.gene22024:CDS
CAGGCAATGTGTTGTATCGT+TGG 0.553276 3.3:-40516657 MS.gene22024:CDS
CCACATGGTAAAACCAAGGC+AGG 0.555507 3.3:+40514013 None:intergenic
GTCGGAAGGGAGGTGGAGGA+AGG 0.557260 3.3:+40518697 None:intergenic
TATGGTGAATCCCGAGCCAA+AGG 0.561140 3.3:-40515621 MS.gene22024:CDS
AGGAGAGTTAAGGAGTTGGG+TGG 0.561444 3.3:-40518494 MS.gene22024:CDS
GCGATGAGGGATTGGTCGGA+AGG 0.563493 3.3:+40518683 None:intergenic
GATTGGTGCAGCATTTAATG+AGG 0.564316 3.3:-40513945 MS.gene22024:CDS
TTTATTGAGAATGGATCGAC+TGG 0.565848 3.3:-40513989 MS.gene22024:CDS
GACGGCGGTGAGGAGAGTTA+AGG 0.567286 3.3:-40518504 MS.gene22024:CDS
CCAAGGCAGGTAGTCCAGCT+AGG 0.568026 3.3:+40514026 None:intergenic
GAGGTGGGATTGAATGAGGT+CGG 0.569920 3.3:+40518754 None:intergenic
AGCCAAAGGGTTAGGTTCTG+AGG 0.574572 3.3:-40515607 MS.gene22024:intron
TGGTGGGTCGAGGATACTTG+AGG 0.574780 3.3:-40518549 MS.gene22024:CDS
GGTGATGGTGGATGATGGAA+GGG 0.575534 3.3:+40518874 None:intergenic
TCATACCTGCTTACTTGATG+TGG 0.577058 3.3:+40516436 None:intergenic
AGGGTGAGGATTTGAGAGGG+GGG 0.579792 3.3:+40518812 None:intergenic
TGAGGGATTGGTCGGAAGGG+AGG 0.584231 3.3:+40518687 None:intergenic
AGGCAATGTGTTGTATCGTT+GGG 0.585368 3.3:-40516656 MS.gene22024:CDS
AGCAGCTGAAGGAGCTGCAG+GGG 0.585773 3.3:+40514998 None:intergenic
CGACCGCAGAATCGCTGCGG+GGG 0.585812 3.3:-40518645 MS.gene22024:CDS
CTGAAATGCAGAAGCTTCAG+TGG 0.585857 3.3:+40518424 None:intergenic
ACAACACCGCAAAATGATGC+CGG 0.586556 3.3:+40516605 None:intergenic
TGTTAAGGATAATATATGTA+CGG 0.587925 3.3:-40518588 MS.gene22024:CDS
AGCGTGAGAGAGTGGAACGT+GGG 0.590701 3.3:+40518900 None:intergenic
GGGTGAGGTGGGATTGAATG+AGG 0.593659 3.3:+40518750 None:intergenic
GCGTCATCACTTGATGCCAT+TGG 0.595721 3.3:-40516530 MS.gene22024:CDS
GGTGGGTCGAGGATACTTGA+GGG 0.597676 3.3:-40518548 MS.gene22024:CDS
AATAGGTGACTGCCAACCCG+TGG 0.597933 3.3:-40516736 MS.gene22024:intron
CCTATTAACATCCCACGGGT+TGG 0.601481 3.3:+40516724 None:intergenic
ATCCTCGACCCACCAGTCGA+CGG 0.609093 3.3:+40518557 None:intergenic
CTGAGCGATGAGGGATTGGT+CGG 0.609395 3.3:+40518679 None:intergenic
TCATTTGCAGGCCAACAGGA+AGG 0.610270 3.3:+40513966 None:intergenic
GCAACAAGAACACCAGCAAG+AGG 0.610406 3.3:+40518611 None:intergenic
AAAGCGAGGACATAGTATGC+TGG 0.610724 3.3:+40515865 None:intergenic
GGTGAGGAGAGTTAAGGAGT+TGG 0.611163 3.3:-40518498 MS.gene22024:CDS
AGATGAACCAAAGCAGCCAA+TGG 0.614909 3.3:+40516514 None:intergenic
AAGCAGCTGAAGGAGCTGCA+GGG 0.619430 3.3:+40514997 None:intergenic
GCACCCTATTAACATCCCAC+GGG 0.621175 3.3:+40516720 None:intergenic
CGTTTGATGCGACGGCGGTG+AGG 0.624256 3.3:-40518514 MS.gene22024:CDS
ATGGTGAATCCCGAGCCAAA+GGG 0.624972 3.3:-40515620 MS.gene22024:CDS
AAGCGTGAGAGAGTGGAACG+TGG 0.633684 3.3:+40518899 None:intergenic
CTGACATGCCGTCGACTGGT+GGG 0.633780 3.3:-40518565 MS.gene22024:CDS
GTGGGATTGAATGAGGTCGG+TGG 0.637339 3.3:+40518757 None:intergenic
ATATGGATGAGTTTGGTATG+GGG 0.639425 3.3:-40518451 MS.gene22024:CDS
GGTCATGTGCCTGAGCGATG+AGG 0.642145 3.3:+40518669 None:intergenic
GGCAACCCAAGTGAAAAGGA+TGG 0.642277 3.3:+40515886 None:intergenic
CCTCGACCGCAGAATCGCTG+CGG 0.643144 3.3:-40518648 MS.gene22024:CDS
ACCGCCGTCGCATCAAACGG+CGG 0.647453 3.3:+40518518 None:intergenic
ATTAGGATGCTCTGTGAACG+AGG 0.648039 3.3:-40516041 MS.gene22024:intron
CCATTCTCAATAAATCCACA+TGG 0.649598 3.3:+40513998 None:intergenic
TCACCAGCATACATAGCCAA+AGG 0.651194 3.3:+40514864 None:intergenic
GAATGAGGTCGGTGGCGGAG+AGG 0.652364 3.3:+40518765 None:intergenic
GCCGCCGTTTGATGCGACGG+CGG 0.654353 3.3:-40518519 MS.gene22024:CDS
ATAGGTGACTGCCAACCCGT+GGG 0.663939 3.3:-40516735 MS.gene22024:intron
AAGATGATTCAGACAAAGCG+AGG 0.664996 3.3:+40515851 None:intergenic
AAATCCACATGGTAAAACCA+AGG 0.672604 3.3:+40514009 None:intergenic
GCGTGAGAGAGTGGAACGTG+GGG 0.681489 3.3:+40518901 None:intergenic
GTGATACTGGTGGAAGTGTG+AGG 0.689164 3.3:-40516631 MS.gene22024:CDS
GTGCCAGGAGGATCATCCGG+AGG 0.699333 3.3:-40516701 MS.gene22024:CDS
TCGACCGCAGAATCGCTGCG+GGG 0.713706 3.3:-40518646 MS.gene22024:CDS
CATGACCAGCAATTGCATGG+AGG 0.725633 3.3:+40516471 None:intergenic
GATGTTAATAGGGTGCCAGG+AGG 0.756629 3.3:-40516713 MS.gene22024:CDS
TCGTTGGGAAGTGATACTGG+TGG 0.795744 3.3:-40516641 MS.gene22024:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAATACAACATAAATAT+TGG - chr3.3:40518507-40518526 MS.gene22024:CDS 10.0%
!!! TCACTTTAAAATTTAAATTA+TGG + chr3.3:40514491-40514510 None:intergenic 10.0%
!! GAATTGAAATAAAATTAACT+AGG + chr3.3:40514841-40514860 None:intergenic 15.0%
!! TGAAAATATATATAAAGAGA+GGG + chr3.3:40514415-40514434 None:intergenic 15.0%
!! TGATTAATTAAGATATTTCT+TGG + chr3.3:40518274-40518293 None:intergenic 15.0%
!! TTCAAATATTTATAATGTCA+GGG - chr3.3:40515131-40515150 MS.gene22024:intron 15.0%
!! TTGAAAATATATATAAAGAG+AGG + chr3.3:40514416-40514435 None:intergenic 15.0%
!! TTGCAATTTCAATAAATTTA+GGG - chr3.3:40514789-40514808 MS.gene22024:intron 15.0%
!! TTTCAAATATTTATAATGTC+AGG - chr3.3:40515130-40515149 MS.gene22024:intron 15.0%
!! TTTGCAATTTCAATAAATTT+AGG - chr3.3:40514788-40514807 MS.gene22024:intron 15.0%
!!! ACTTTATTTTATGTTTTTCT+TGG - chr3.3:40517455-40517474 MS.gene22024:intron 15.0%
!!! TGGTTTTTTTTTTTTTTATC+CGG - chr3.3:40515253-40515272 MS.gene22024:intron 15.0%
!!! TTAGTTTTTTTTGTTTTGTT+TGG - chr3.3:40514555-40514574 MS.gene22024:intron 15.0%
!!! TTCATTTATTTTAGAAGTTT+GGG - chr3.3:40517688-40517707 MS.gene22024:intron 15.0%
!!! TTCTATTTTTAATACATTTC+AGG - chr3.3:40517346-40517365 MS.gene22024:intron 15.0%
!!! TTTCATTTATTTTAGAAGTT+TGG - chr3.3:40517687-40517706 MS.gene22024:intron 15.0%
!! AAACATATCTCAGTTATAAA+TGG + chr3.3:40516025-40516044 None:intergenic 20.0%
!! AACATATCTCAGTTATAAAT+GGG + chr3.3:40516024-40516043 None:intergenic 20.0%
!! AAGTATTTCATTCTTCTTAT+TGG - chr3.3:40517977-40517996 MS.gene22024:intron 20.0%
!! AATACCAATGCATATAAAAT+TGG + chr3.3:40517315-40517334 None:intergenic 20.0%
!! ACAAAATAAAACATTGTGTT+CGG + chr3.3:40517065-40517084 None:intergenic 20.0%
!! AGCAAAAAAAGAATATGAAA+TGG + chr3.3:40515211-40515230 None:intergenic 20.0%
!! ATCCTTCTTAATTTCAAATT+TGG - chr3.3:40517235-40517254 MS.gene22024:intron 20.0%
!! ATCTAAAAGTTCAAAAAACA+AGG + chr3.3:40515387-40515406 None:intergenic 20.0%
!! ATGGTAAGTTGTTAAAATAT+AGG - chr3.3:40515041-40515060 MS.gene22024:CDS 20.0%
!! ATTACAAAACATACAAAAAG+TGG - chr3.3:40515916-40515935 MS.gene22024:intron 20.0%
!! ATTGTATAGGATTATTGTTT+AGG + chr3.3:40518575-40518594 None:intergenic 20.0%
!! ATTGTTAAAAGGCAATTAAT+TGG + chr3.3:40516561-40516580 None:intergenic 20.0%
!! ATTTGAAAGTTTAATAGAGT+CGG - chr3.3:40515101-40515120 MS.gene22024:intron 20.0%
!! CTTAAAATTACTGTCAAATT+AGG - chr3.3:40514752-40514771 MS.gene22024:intron 20.0%
!! TCAAAATGAGATAGAAAATT+GGG + chr3.3:40516616-40516635 None:intergenic 20.0%
!! TCTAAAAGTTCAAAAAACAA+GGG + chr3.3:40515386-40515405 None:intergenic 20.0%
!! TGGTAAGTTGTTAAAATATA+GGG - chr3.3:40515042-40515061 MS.gene22024:CDS 20.0%
!! TGTTAAGGATAATATATGTA+CGG - chr3.3:40514218-40514237 MS.gene22024:intron 20.0%
!! TTAAAGTGAATATTAATCTC+AGG - chr3.3:40514502-40514521 MS.gene22024:intron 20.0%
!! TTAACAACATATAATGAGAT+CGG + chr3.3:40518031-40518050 None:intergenic 20.0%
!! TTACAAAACATACAAAAAGT+GGG - chr3.3:40515917-40515936 MS.gene22024:intron 20.0%
!!! AATTAATTGGCTTAATAACA+AGG + chr3.3:40516548-40516567 None:intergenic 20.0%
!!! CTAATTTGACAGTAATTTTA+AGG + chr3.3:40514754-40514773 None:intergenic 20.0%
!!! CTTTTTTTCATTATTAGCAA+TGG - chr3.3:40516430-40516449 MS.gene22024:intron 20.0%
!!! TAATGTTTGCTTTTCTTTAT+TGG - chr3.3:40518728-40518747 MS.gene22024:CDS 20.0%
!!! TATTTTATGTTTTTCTTGGT+GGG - chr3.3:40517459-40517478 MS.gene22024:intron 20.0%
!!! TCATTGATAATCATTTTGTT+TGG - chr3.3:40517096-40517115 MS.gene22024:intron 20.0%
!!! TGAATCAAGTTTAATTTCAA+TGG + chr3.3:40518148-40518167 None:intergenic 20.0%
!!! TTATTTTATGTTTTTCTTGG+TGG - chr3.3:40517458-40517477 MS.gene22024:intron 20.0%
! AAATGTAGGGAATAAATTGA+TGG - chr3.3:40515022-40515041 MS.gene22024:CDS 25.0%
! ACTAATAAAAAATGCACTTG+TGG + chr3.3:40514658-40514677 None:intergenic 25.0%
! AGCTAACAATGTAATTTATC+AGG - chr3.3:40516585-40516604 MS.gene22024:CDS 25.0%
! AGTTATAGAGAAAAATGAAG+TGG + chr3.3:40516795-40516814 None:intergenic 25.0%
! ATAGCAAGTGGTTAAATAAA+GGG - chr3.3:40515074-40515093 MS.gene22024:intron 25.0%
! ATGGTTCAAAGTTTCAAATA+AGG + chr3.3:40514472-40514491 None:intergenic 25.0%
! ATTCTTAGATACATTAGTGT+GGG - chr3.3:40515444-40515463 MS.gene22024:intron 25.0%
! CGTCTCTATATTTATTGTAT+AGG + chr3.3:40518588-40518607 None:intergenic 25.0%
! CTTAATTAATCAATAACTGC+CGG - chr3.3:40518282-40518301 MS.gene22024:intron 25.0%
! GAAGAATGAAAATTGCAAAT+CGG - chr3.3:40515739-40515758 MS.gene22024:intron 25.0%
! GATGCATATGTTAATTCAAT+AGG - chr3.3:40516053-40516072 MS.gene22024:CDS 25.0%
! GATTATGAGTGTTTGAAAAA+AGG - chr3.3:40514923-40514942 MS.gene22024:intron 25.0%
! GATTGAATATATACCATCTA+AGG + chr3.3:40518243-40518262 None:intergenic 25.0%
! GTCAAAATGAGATAGAAAAT+TGG + chr3.3:40516617-40516636 None:intergenic 25.0%
! GTTAGCTATTCATTGTTAAA+AGG + chr3.3:40516572-40516591 None:intergenic 25.0%
! TAACAATGTAATTTATCAGG+AGG - chr3.3:40516588-40516607 MS.gene22024:CDS 25.0%
! TACAAAACATACAAAAAGTG+GGG - chr3.3:40515918-40515937 MS.gene22024:intron 25.0%
! TATATACTTGACACATGTTA+AGG + chr3.3:40518327-40518346 None:intergenic 25.0%
! TATATCTTCTGAGTATGTTA+GGG - chr3.3:40514977-40514996 MS.gene22024:intron 25.0%
! TCTCTACGTCTTAAATATAA+TGG + chr3.3:40515804-40515823 None:intergenic 25.0%
! TGAAAAGAAAAATGATCCTT+TGG - chr3.3:40517926-40517945 MS.gene22024:intron 25.0%
! TGAAATTAAGAAGGATTGAA+AGG + chr3.3:40517231-40517250 None:intergenic 25.0%
! TGAATTAAATTTGTGAGCAT+GGG - chr3.3:40515688-40515707 MS.gene22024:intron 25.0%
! TGACTGAATTCATTATCATT+GGG + chr3.3:40517512-40517531 None:intergenic 25.0%
! TGTTGAATTAGAGAAAATAG+AGG - chr3.3:40518424-40518443 MS.gene22024:CDS 25.0%
! TTAATTAATCAATAACTGCC+GGG - chr3.3:40518283-40518302 MS.gene22024:intron 25.0%
! TTACTACTAACATTACAAAC+TGG + chr3.3:40515603-40515622 None:intergenic 25.0%
! TTATATCTTCTGAGTATGTT+AGG - chr3.3:40514976-40514995 MS.gene22024:intron 25.0%
! TTGAATTAAATTTGTGAGCA+TGG - chr3.3:40515687-40515706 MS.gene22024:intron 25.0%
! TTTAAGGACTAAATTAACCA+AGG + chr3.3:40514738-40514757 None:intergenic 25.0%
!! AACAACATTTTTACCAAACA+TGG + chr3.3:40516404-40516423 None:intergenic 25.0%
!! AGCCAAATTTGAAATTAAGA+AGG + chr3.3:40517240-40517259 None:intergenic 25.0%
!! TGATCCAATTTTATATGCAT+TGG - chr3.3:40517308-40517327 MS.gene22024:intron 25.0%
!! TTGGATCAATTCTTTTATAC+AGG + chr3.3:40517296-40517315 None:intergenic 25.0%
!!! ATAATCATTTTGTTTGGCTT+GGG - chr3.3:40517102-40517121 MS.gene22024:intron 25.0%
!!! GTGAAAATGAGAATTTTGAT+GGG - chr3.3:40517368-40517387 MS.gene22024:intron 25.0%
!!! TGAAAATGAGAATTTTGATG+GGG - chr3.3:40517369-40517388 MS.gene22024:intron 25.0%
!!! TTGGTGGTTTTTCTTTTTAT+AGG - chr3.3:40518747-40518766 MS.gene22024:CDS 25.0%
AAGAGAACGATTACAATTAC+AGG + chr3.3:40517889-40517908 None:intergenic 30.0%
AATATGGATGAGTTTGGTAT+GGG - chr3.3:40514354-40514373 MS.gene22024:intron 30.0%
ACAAACAAACAAACAACTAC+CGG + chr3.3:40515275-40515294 None:intergenic 30.0%
ACAACCTAAAAACAGATTTG+AGG + chr3.3:40514690-40514709 None:intergenic 30.0%
ACCTTCTCTATATCTAGATA+TGG - chr3.3:40517128-40517147 MS.gene22024:intron 30.0%
AGAAAAGCAAACATTATGCT+CGG + chr3.3:40518724-40518743 None:intergenic 30.0%
ATAGTAAGCGGTTAAATGTA+GGG - chr3.3:40515009-40515028 MS.gene22024:CDS 30.0%
ATATCTAGATATAGAGAAGG+TGG + chr3.3:40517129-40517148 None:intergenic 30.0%
ATTCGTGAAACTATTGAAGA+TGG - chr3.3:40516688-40516707 MS.gene22024:CDS 30.0%
CATTATAAGGAATAGCTTCA+AGG - chr3.3:40517755-40517774 MS.gene22024:intron 30.0%
CTTGAAGCTATTCCTTATAA+TGG + chr3.3:40517757-40517776 None:intergenic 30.0%
GATAGCAAGTGGTTAAATAA+AGG - chr3.3:40515073-40515092 MS.gene22024:intron 30.0%
GATTCTTAGATACATTAGTG+TGG - chr3.3:40515443-40515462 MS.gene22024:intron 30.0%
GGCTCTTTGTTAAATATGAA+GGG - chr3.3:40516483-40516502 MS.gene22024:CDS 30.0%
GGGAAATCAAGATATCATAT+TGG + chr3.3:40517791-40517810 None:intergenic 30.0%
GTGACTGAATTCATTATCAT+TGG + chr3.3:40517513-40517532 None:intergenic 30.0%
TAACTGAGATATGTTTACTC+AGG - chr3.3:40516029-40516048 MS.gene22024:intron 30.0%
TATAGAGAAAAATGAAGTGG+AGG + chr3.3:40516792-40516811 None:intergenic 30.0%
TCCATATCTAGATATAGAGA+AGG + chr3.3:40517132-40517151 None:intergenic 30.0%
TGTTAGTAGTAAATGTGAGA+AGG - chr3.3:40515611-40515630 MS.gene22024:CDS 30.0%
TTACATAGAACACGCATAAA+AGG + chr3.3:40517724-40517743 None:intergenic 30.0%
TTCTTAGATACATTAGTGTG+GGG - chr3.3:40515445-40515464 MS.gene22024:intron 30.0%
! AAGTTAATGGACAGATGAAA+AGG + chr3.3:40516887-40516906 None:intergenic 30.0%
! AATAGTGTTAGTTTGAGGTT+TGG - chr3.3:40518099-40518118 MS.gene22024:intron 30.0%
! AGACAAATAGTGTTAGTTTG+AGG - chr3.3:40518094-40518113 MS.gene22024:intron 30.0%
! AGTTAATGGACAGATGAAAA+GGG + chr3.3:40516886-40516905 None:intergenic 30.0%
! ATATCCTACAGTTGCTTTAT+GGG - chr3.3:40515762-40515781 MS.gene22024:intron 30.0%
! ATGATAATGAATTCAGTCAC+AGG - chr3.3:40517513-40517532 MS.gene22024:intron 30.0%
! ATGATGTTTGATGATCCATT+TGG - chr3.3:40515488-40515507 MS.gene22024:intron 30.0%
! CAGCAGAGTCAATTTTATAT+AGG - chr3.3:40518476-40518495 MS.gene22024:CDS 30.0%
! GGTGAAAATGAGAATTTTGA+TGG - chr3.3:40517367-40517386 MS.gene22024:intron 30.0%
! TATGAGTTTTTCACCATGTT+TGG - chr3.3:40516388-40516407 MS.gene22024:intron 30.0%
! TCTTTGAATGTGTTTTTCCT+TGG - chr3.3:40514718-40514737 MS.gene22024:intron 30.0%
! TTTTCTCTCCAAATAAATGC+TGG + chr3.3:40515716-40515735 None:intergenic 30.0%
!! AGTATAACTTGCTGTCATAT+TGG - chr3.3:40514602-40514621 MS.gene22024:intron 30.0%
!! GATAATCATTTTGTTTGGCT+TGG - chr3.3:40517101-40517120 MS.gene22024:intron 30.0%
!! TAGTCCTCAAATCTGTTTTT+AGG - chr3.3:40514683-40514702 MS.gene22024:intron 30.0%
!! TGTTTGCTTTTCTTTATTGG+TGG - chr3.3:40518731-40518750 MS.gene22024:CDS 30.0%
!! TTAACCACTTGCTATCAATT+AGG + chr3.3:40515069-40515088 None:intergenic 30.0%
!! TTTTGACTATGCAAGTTCTT+TGG - chr3.3:40516630-40516649 MS.gene22024:CDS 30.0%
!!! GTGTTTTTGTTTTCCAGTTT+GGG - chr3.3:40515321-40515340 MS.gene22024:intron 30.0%
!!! TGTGTTTTTGTTTTCCAGTT+TGG - chr3.3:40515320-40515339 MS.gene22024:intron 30.0%
AAACTCTTGCTTCATTTCCT+AGG - chr3.3:40517643-40517662 MS.gene22024:intron 35.0%
AAAGAATAGTGTCGTATGCT+AGG - chr3.3:40515541-40515560 MS.gene22024:intron 35.0%
AAATCCACATGGTAAAACCA+AGG + chr3.3:40518800-40518819 None:intergenic 35.0%
AACAGGTGAGAACCATTATA+AGG - chr3.3:40517742-40517761 MS.gene22024:intron 35.0%
AAGACGAATATGGATGAGTT+TGG - chr3.3:40514348-40514367 MS.gene22024:intron 35.0%
ACAATGTTTGGTATAGTCTC+GGG - chr3.3:40516462-40516481 MS.gene22024:CDS 35.0%
ACTTTCAAGGACCTAAATTG+TGG + chr3.3:40514585-40514604 None:intergenic 35.0%
ATATGGATGAGTTTGGTATG+GGG - chr3.3:40514355-40514374 MS.gene22024:intron 35.0%
ATCAAACTCTCTAAACCACT+GGG + chr3.3:40518649-40518668 None:intergenic 35.0%
ATCATAGTAACCAGCTGAAA+GGG + chr3.3:40517402-40517421 None:intergenic 35.0%
CCATGTGGATTTATTGAGAA+TGG - chr3.3:40518808-40518827 MS.gene22024:CDS 35.0%
CCATTCTCAATAAATCCACA+TGG + chr3.3:40518811-40518830 None:intergenic 35.0%
CCTTCAGCTGCTTATAAAAT+TGG - chr3.3:40517819-40517838 MS.gene22024:intron 35.0%
GAATATGGATGAGTTTGGTA+TGG - chr3.3:40514353-40514372 MS.gene22024:intron 35.0%
GACAATGTTTGGTATAGTCT+CGG - chr3.3:40516461-40516480 MS.gene22024:CDS 35.0%
GACAGCAAGTTATACTTTCA+AGG + chr3.3:40514598-40514617 None:intergenic 35.0%
GATAGTAAGCGGTTAAATGT+AGG - chr3.3:40515008-40515027 MS.gene22024:CDS 35.0%
GGGCTCTTTGTTAAATATGA+AGG - chr3.3:40516482-40516501 MS.gene22024:CDS 35.0%
TAAATGTGAGAAGGTTTGAG+TGG - chr3.3:40515620-40515639 MS.gene22024:CDS 35.0%
TACACTAAACTTCGTGTTGA+CGG - chr3.3:40518904-40518923 MS.gene22024:CDS 35.0%
TACTGTCAAATTAGGTGCTA+GGG - chr3.3:40514760-40514779 MS.gene22024:intron 35.0%
TCATCTGTCCATTAACTTAC+AGG - chr3.3:40516889-40516908 MS.gene22024:intron 35.0%
TCTCTTTCTTTGACATTTGC+AGG - chr3.3:40517903-40517922 MS.gene22024:intron 35.0%
TTACTGTCAAATTAGGTGCT+AGG - chr3.3:40514759-40514778 MS.gene22024:intron 35.0%
TTATGCGTGTTCTATGTAAC+AGG - chr3.3:40517725-40517744 MS.gene22024:intron 35.0%
TTTATTGAGAATGGATCGAC+TGG - chr3.3:40518817-40518836 MS.gene22024:CDS 35.0%
! CCAATTTTATAAGCAGCTGA+AGG + chr3.3:40517822-40517841 None:intergenic 35.0%
! CTGGACATTTGAAATTTGAG+AGG + chr3.3:40515584-40515603 None:intergenic 35.0%
! GACTTCTAGTTACTCCATAA+AGG - chr3.3:40518362-40518381 MS.gene22024:intron 35.0%
! GATATCCTACAGTTGCTTTA+TGG - chr3.3:40515761-40515780 MS.gene22024:intron 35.0%
! GGGACTAAATTGATAGTAAG+CGG - chr3.3:40514997-40515016 MS.gene22024:CDS 35.0%
! GTTGTAGTGCATTTCTGTTT+TGG - chr3.3:40515233-40515252 MS.gene22024:intron 35.0%
! TAGGTTTGAAGCCAACATAT+GGG - chr3.3:40516223-40516242 MS.gene22024:intron 35.0%
! TATCCTACAGTTGCTTTATG+GGG - chr3.3:40515763-40515782 MS.gene22024:intron 35.0%
! TTAGAAGTTTGGGATCTACA+AGG - chr3.3:40517698-40517717 MS.gene22024:intron 35.0%
!! TATGCATTGGTATTTTGAGC+TGG - chr3.3:40517321-40517340 MS.gene22024:intron 35.0%
!!! TTTTTGTTTTCCAGTTTGGG+TGG - chr3.3:40515324-40515343 MS.gene22024:intron 35.0%
AAACCAGTCTCTGACTTTGT+AGG - chr3.3:40514878-40514897 MS.gene22024:CDS 40.0%
AACCAGTCTCTGACTTTGTA+GGG - chr3.3:40514879-40514898 MS.gene22024:CDS 40.0%
AACTGATGACTTCATTCGCT+GGG + chr3.3:40518393-40518412 None:intergenic 40.0%
AAGATGATTCAGACAAAGCG+AGG + chr3.3:40516958-40516977 None:intergenic 40.0%
ACCAATTCTCAGTCCTTTCA+AGG + chr3.3:40516665-40516684 None:intergenic 40.0%
AGGCAATGTGTTGTATCGTT+GGG - chr3.3:40516150-40516169 MS.gene22024:CDS 40.0%
ATAACTAGTTATGCACCCAG+TGG - chr3.3:40518631-40518650 MS.gene22024:CDS 40.0%
ATGCAAAAGGAAAGCTACAC+AGG + chr3.3:40517851-40517870 None:intergenic 40.0%
ATTGTTGACGAATGACCTGA+TGG - chr3.3:40515854-40515873 MS.gene22024:CDS 40.0%
CAGTGACACCTGTAAGTTAA+TGG + chr3.3:40516900-40516919 None:intergenic 40.0%
CATCACATTATGCATCCATC+AGG + chr3.3:40515872-40515891 None:intergenic 40.0%
CATCATAGTAACCAGCTGAA+AGG + chr3.3:40517403-40517422 None:intergenic 40.0%
CATGGGTTCCAGCATTTATT+TGG - chr3.3:40515705-40515724 MS.gene22024:intron 40.0%
CCAATTCTCAGTCCTTTCAA+GGG + chr3.3:40516664-40516683 None:intergenic 40.0%
CTAAAAGACGCGTAAAGAAC+AGG + chr3.3:40517614-40517633 None:intergenic 40.0%
CTATGATGGTATTAGGTCAG+TGG - chr3.3:40516991-40517010 MS.gene22024:intron 40.0%
GATCAAACTCTCTAAACCAC+TGG + chr3.3:40518650-40518669 None:intergenic 40.0%
GATTGGTGCAGCATTTAATG+AGG - chr3.3:40518861-40518880 MS.gene22024:CDS 40.0%
GTTTGAGTGGTGACATTATG+TGG - chr3.3:40515633-40515652 MS.gene22024:CDS 40.0%
TAACTGATGACTTCATTCGC+TGG + chr3.3:40518394-40518413 None:intergenic 40.0%
TACTACAATATGCAACGACC+CGG + chr3.3:40518304-40518323 None:intergenic 40.0%
TAGGTAAATGTCAACCTAGC+TGG - chr3.3:40518766-40518785 MS.gene22024:CDS 40.0%
TATCATGACCAGCAATTGCA+TGG + chr3.3:40516341-40516360 None:intergenic 40.0%
TCATACCTGCTTACTTGATG+TGG + chr3.3:40516373-40516392 None:intergenic 40.0%
TGGTCATTGACGACAATGTT+TGG - chr3.3:40516450-40516469 MS.gene22024:CDS 40.0%
TGTCTCGCTATGATGGTATT+AGG - chr3.3:40516984-40517003 MS.gene22024:intron 40.0%
TGTGTTCGGTTGTGTGTATT+TGG + chr3.3:40517051-40517070 None:intergenic 40.0%
TGTTGTTGGGAAGACGAATA+TGG - chr3.3:40514338-40514357 MS.gene22024:intron 40.0%
TGTTTGGCACACCACAATTT+AGG - chr3.3:40514571-40514590 MS.gene22024:intron 40.0%
TTGGAAAGTAAGCCCTTGAA+AGG - chr3.3:40516649-40516668 MS.gene22024:CDS 40.0%
! ACACTAAACTTCGTGTTGAC+GGG - chr3.3:40518905-40518924 MS.gene22024:CDS 40.0%
! GTAGGTTTGAAGCCAACATA+TGG - chr3.3:40516222-40516241 MS.gene22024:intron 40.0%
! TACAAAGTCAGAGACTGGTT+TGG + chr3.3:40514879-40514898 None:intergenic 40.0%
! TGGTGTTCTTGTTGCTGTTA+AGG - chr3.3:40514203-40514222 MS.gene22024:intron 40.0%
!! ATTGAAGATGGTGTTGATGC+TGG - chr3.3:40516700-40516719 MS.gene22024:CDS 40.0%
!! GCTTCACATTTTCAGGCATT+AGG - chr3.3:40516748-40516767 MS.gene22024:intron 40.0%
!! TGATGCTGCTTCACATTTTC+AGG - chr3.3:40516741-40516760 MS.gene22024:intron 40.0%
AAAGCGAGGACATAGTATGC+TGG + chr3.3:40516944-40516963 None:intergenic 45.0%
AACTAGTCCCAGACTTCGTA+TGG + chr3.3:40515172-40515191 None:intergenic 45.0%
ACAACACCGCAAAATGATGC+CGG + chr3.3:40516204-40516223 None:intergenic 45.0%
ACCATCATAGCGAGACAAGT+TGG + chr3.3:40516981-40517000 None:intergenic 45.0%
AGATGAACCAAAGCAGCCAA+TGG + chr3.3:40516295-40516314 None:intergenic 45.0%
ATATTACAAACGAGCGCAGC+AGG - chr3.3:40517424-40517443 MS.gene22024:intron 45.0%
ATGCTGCACCAATCATTTGC+AGG + chr3.3:40518855-40518874 None:intergenic 45.0%
ATTAGGATGCTCTGTGAACG+AGG - chr3.3:40516765-40516784 MS.gene22024:intron 45.0%
ATTCTCCTCCATGCAATTGC+TGG - chr3.3:40516330-40516349 MS.gene22024:intron 45.0%
CAACCCGTGGGATGTTAATA+GGG - chr3.3:40516083-40516102 MS.gene22024:CDS 45.0%
CAACGATACAACACATTGCC+TGG + chr3.3:40516151-40516170 None:intergenic 45.0%
CACTGAAGCTTCTGCATTTC+AGG - chr3.3:40514383-40514402 MS.gene22024:intron 45.0%
CAGGCAATGTGTTGTATCGT+TGG - chr3.3:40516149-40516168 MS.gene22024:CDS 45.0%
CATGACTGACATCAGCCAAA+TGG + chr3.3:40515506-40515525 None:intergenic 45.0%
CCCTTGAAAGGACTGAGAAT+TGG - chr3.3:40516661-40516680 MS.gene22024:CDS 45.0%
CGAGGATACTTGAGGGTTAT+CGG - chr3.3:40514265-40514284 MS.gene22024:intron 45.0%
CGTCTCAAGATTTGGACTCA+TGG - chr3.3:40516248-40516267 MS.gene22024:intron 45.0%
CTAGCTCGTCAGCATAAACT+TGG + chr3.3:40517157-40517176 None:intergenic 45.0%
CTGAAATGCAGAAGCTTCAG+TGG + chr3.3:40514385-40514404 None:intergenic 45.0%
CTGATGTCAGTCATGTTGAG+CGG - chr3.3:40515511-40515530 MS.gene22024:intron 45.0%
GAACGCTGATAAGACAACCT+AGG + chr3.3:40517663-40517682 None:intergenic 45.0%
GATCCTTTGGCTATGTATGC+TGG - chr3.3:40517939-40517958 MS.gene22024:intron 45.0%
GCTTAAATGTCCACCCAAAC+TGG + chr3.3:40515337-40515356 None:intergenic 45.0%
GTATCGTTGGGAAGTGATAC+TGG - chr3.3:40516162-40516181 MS.gene22024:CDS 45.0%
GTGAGGAGAGTTAAGGAGTT+GGG - chr3.3:40514309-40514328 MS.gene22024:intron 45.0%
TACAAAAAGTGGGGTTGTGC+TGG - chr3.3:40515927-40515946 MS.gene22024:intron 45.0%
TACCTCAGAACCTAACCCTT+TGG + chr3.3:40517204-40517223 None:intergenic 45.0%
TCACCAGCATACATAGCCAA+AGG + chr3.3:40517945-40517964 None:intergenic 45.0%
TCCAACTTGTCTCGCTATGA+TGG - chr3.3:40516977-40516996 MS.gene22024:intron 45.0%
TCTGCTGTGTAGTTGAGACA+CGG + chr3.3:40518463-40518482 None:intergenic 45.0%
TGATGCCACATCAAGTAAGC+AGG - chr3.3:40516365-40516384 MS.gene22024:intron 45.0%
TTCGCTGGGATACTCCTTTA+TGG + chr3.3:40518379-40518398 None:intergenic 45.0%
TTCGTATGGCGCTCTCAAAT+AGG + chr3.3:40515158-40515177 None:intergenic 45.0%
TTGGGTTAAGAAGAACCGAG+AGG + chr3.3:40517494-40517513 None:intergenic 45.0%
! AGTTGGGTGGGATTGTTGTT+GGG - chr3.3:40514325-40514344 MS.gene22024:intron 45.0%
! CACTAAACTTCGTGTTGACG+GGG - chr3.3:40518906-40518925 MS.gene22024:CDS 45.0%
! CACTGCCATCCTTTTCACTT+GGG - chr3.3:40516915-40516934 MS.gene22024:intron 45.0%
! CATTAGTGTGGGGTTAGTGT+TGG - chr3.3:40515455-40515474 MS.gene22024:intron 45.0%
! GGGACCTAATTGATAGCAAG+TGG - chr3.3:40515062-40515081 MS.gene22024:CDS 45.0%
! TCACTGCCATCCTTTTCACT+TGG - chr3.3:40516914-40516933 MS.gene22024:intron 45.0%
! TTTGTAGGGCGTTCTCAGAT+AGG - chr3.3:40514893-40514912 MS.gene22024:intron 45.0%
!! AAAGTCAGAGACTGGTTTGG+TGG + chr3.3:40514876-40514895 None:intergenic 45.0%
!! CTGCTGGTTTATGCCTTAGA+TGG - chr3.3:40518227-40518246 MS.gene22024:intron 45.0%
!! TACGAAGTCTGGGACTAGTT+TGG - chr3.3:40515172-40515191 MS.gene22024:intron 45.0%
!!! GCATCATTTTGCGGTGTTGT+AGG - chr3.3:40516204-40516223 MS.gene22024:intron 45.0%
AGACGCGTAAAGAACAGGAG+TGG + chr3.3:40517609-40517628 None:intergenic 50.0%
AGCCAAAGGGTTAGGTTCTG+AGG - chr3.3:40517199-40517218 MS.gene22024:intron 50.0%
AGGAGAGTTAAGGAGTTGGG+TGG - chr3.3:40514312-40514331 MS.gene22024:intron 50.0%
ATGGTGAATCCCGAGCCAAA+GGG - chr3.3:40517186-40517205 MS.gene22024:intron 50.0%
ATTTGGACGAAGAGAGCGAG+AGG + chr3.3:40517034-40517053 None:intergenic 50.0%
CAGAACCTAACCCTTTGGCT+CGG + chr3.3:40517199-40517218 None:intergenic 50.0%
CATGACCAGCAATTGCATGG+AGG + chr3.3:40516338-40516357 None:intergenic 50.0%
CCAACCCGTGGGATGTTAAT+AGG - chr3.3:40516082-40516101 MS.gene22024:CDS 50.0%
CCAATCATTTGCAGGCCAAC+AGG + chr3.3:40518847-40518866 None:intergenic 50.0%
CCACATGGTAAAACCAAGGC+AGG + chr3.3:40518796-40518815 None:intergenic 50.0%
CCTATTAACATCCCACGGGT+TGG + chr3.3:40516085-40516104 None:intergenic 50.0%
CTGCCCCATAAAGCAACTGT+AGG + chr3.3:40515769-40515788 None:intergenic 50.0%
GACGAGCTAGACTCTCTCTA+TGG - chr3.3:40517167-40517186 MS.gene22024:intron 50.0%
GAGGTGGGATTGAATGAGGT+CGG + chr3.3:40514055-40514074 None:intergenic 50.0%
GAGTTGGGTGGGATTGTTGT+TGG - chr3.3:40514324-40514343 MS.gene22024:intron 50.0%
GCAACAAGAACACCAGCAAG+AGG + chr3.3:40514198-40514217 None:intergenic 50.0%
GCACCCTATTAACATCCCAC+GGG + chr3.3:40516089-40516108 None:intergenic 50.0%
GCGTCATCACTTGATGCCAT+TGG - chr3.3:40516276-40516295 MS.gene22024:intron 50.0%
GGAGAGTTAAGGAGTTGGGT+GGG - chr3.3:40514313-40514332 MS.gene22024:intron 50.0%
GGCAACCCAAGTGAAAAGGA+TGG + chr3.3:40516923-40516942 None:intergenic 50.0%
GGCACCCTATTAACATCCCA+CGG + chr3.3:40516090-40516109 None:intergenic 50.0%
GGCATAAACCAGCAGTACTG+TGG + chr3.3:40518222-40518241 None:intergenic 50.0%
GGTGAGGAGAGTTAAGGAGT+TGG - chr3.3:40514308-40514327 MS.gene22024:intron 50.0%
GGTGGGTCTGATATACCTCT+CGG - chr3.3:40517476-40517495 MS.gene22024:intron 50.0%
GTTCATCTGTCGCTGATGCT+GGG - chr3.3:40516307-40516326 MS.gene22024:intron 50.0%
TATGGGCGCGTCTCAAGATT+TGG - chr3.3:40516240-40516259 MS.gene22024:intron 50.0%
TATGGTGAATCCCGAGCCAA+AGG - chr3.3:40517185-40517204 MS.gene22024:intron 50.0%
TCATTTGCAGGCCAACAGGA+AGG + chr3.3:40518843-40518862 None:intergenic 50.0%
TCGTTGGGAAGTGATACTGG+TGG - chr3.3:40516165-40516184 MS.gene22024:CDS 50.0%
TGCTGGCAACCCAAGTGAAA+AGG + chr3.3:40516927-40516946 None:intergenic 50.0%
TTTGGACGAAGAGAGCGAGA+GGG + chr3.3:40517033-40517052 None:intergenic 50.0%
! AGAACCTAACCCTTTGGCTC+GGG + chr3.3:40517198-40517217 None:intergenic 50.0%
! CCTGTTGGCCTGCAAATGAT+TGG - chr3.3:40518844-40518863 MS.gene22024:CDS 50.0%
! CTTGATGCCATTGGCTGCTT+TGG - chr3.3:40516285-40516304 MS.gene22024:intron 50.0%
! GAATAGCTTCAAGGAAGCGC+TGG - chr3.3:40517764-40517783 MS.gene22024:intron 50.0%
! GATGTTAATAGGGTGCCAGG+AGG - chr3.3:40516093-40516112 MS.gene22024:CDS 50.0%
! GTGATACTGGTGGAAGTGTG+AGG - chr3.3:40516175-40516194 MS.gene22024:CDS 50.0%
! GTTTTTCTCCGTCTGTGGGT+GGG - chr3.3:40515949-40515968 MS.gene22024:intron 50.0%
! TGGGATGTTAATAGGGTGCC+AGG - chr3.3:40516090-40516109 MS.gene22024:CDS 50.0%
!! GAAGTCTGGGACTAGTTTGG+TGG - chr3.3:40515175-40515194 MS.gene22024:intron 50.0%
!! GGTGATGGTGGATGATGGAA+GGG + chr3.3:40513935-40513954 None:intergenic 50.0%
!! TGGTGATGGTGGATGATGGA+AGG + chr3.3:40513936-40513955 None:intergenic 50.0%
!!! CCTGCCTTGGTTTTACCATG+TGG - chr3.3:40518793-40518812 MS.gene22024:CDS 50.0%
!!! GCTGGTTTTTCTCCGTCTGT+GGG - chr3.3:40515945-40515964 MS.gene22024:intron 50.0%
!!! TGCTGGTTTTTCTCCGTCTG+TGG - chr3.3:40515944-40515963 MS.gene22024:intron 50.0%
AAGCAGCTGAAGGAGCTGCA+GGG + chr3.3:40517812-40517831 None:intergenic 55.0%
AAGCGTGAGAGAGTGGAACG+TGG + chr3.3:40513910-40513929 None:intergenic 55.0%
AAGGGAGGTGGAGGAAGGAA+CGG + chr3.3:40514107-40514126 None:intergenic 55.0%
AATAGGTGACTGCCAACCCG+TGG - chr3.3:40516070-40516089 MS.gene22024:CDS 55.0%
AGAGAGTGGAACGTGGGGTT+TGG + chr3.3:40513903-40513922 None:intergenic 55.0%
AGCGTGAGAGAGTGGAACGT+GGG + chr3.3:40513909-40513928 None:intergenic 55.0%
AGGAGGATCATCCGGAGGAT+CGG - chr3.3:40516110-40516129 MS.gene22024:CDS 55.0%
AGGGTGAGGATTTGAGAGGG+GGG + chr3.3:40513997-40514016 None:intergenic 55.0%
ATAGGTGACTGCCAACCCGT+GGG - chr3.3:40516071-40516090 MS.gene22024:CDS 55.0%
CAGTACTGTGGCCTGCTCAA+TGG + chr3.3:40518210-40518229 None:intergenic 55.0%
CGCCCTACAAAGTCAGAGAC+TGG + chr3.3:40514884-40514903 None:intergenic 55.0%
CGGAGGGTGAGGATTTGAGA+GGG + chr3.3:40514000-40514019 None:intergenic 55.0%
CTTGAGACGCGCCCATATGT+TGG + chr3.3:40516237-40516256 None:intergenic 55.0%
GAATCCCGAGCCAAAGGGTT+AGG - chr3.3:40517191-40517210 MS.gene22024:intron 55.0%
GAGAGTAGCTTGGGTGGTGA+TGG + chr3.3:40513950-40513969 None:intergenic 55.0%
GAGGGTGAGGATTTGAGAGG+GGG + chr3.3:40513998-40514017 None:intergenic 55.0%
GCTTTATGGGGCAGCAGCTA+TGG - chr3.3:40515775-40515794 MS.gene22024:intron 55.0%
GGAGGGTGAGGATTTGAGAG+GGG + chr3.3:40513999-40514018 None:intergenic 55.0%
GGATTGAATGAGGTCGGTGG+CGG + chr3.3:40514049-40514068 None:intergenic 55.0%
GGGACATATGCCCTTTCAGC+TGG - chr3.3:40517389-40517408 MS.gene22024:intron 55.0%
GGGGTGTGTGAGAGTAGCTT+GGG + chr3.3:40513959-40513978 None:intergenic 55.0%
GGGTGAGGTGGGATTGAATG+AGG + chr3.3:40514059-40514078 None:intergenic 55.0%
GGTGGGTCGAGGATACTTGA+GGG - chr3.3:40514258-40514277 MS.gene22024:intron 55.0%
GGTTCATCTGTCGCTGATGC+TGG - chr3.3:40516306-40516325 MS.gene22024:intron 55.0%
GTCATGTGCCTGAGCGATGA+GGG + chr3.3:40514139-40514158 None:intergenic 55.0%
GTGGGATTGAATGAGGTCGG+TGG + chr3.3:40514052-40514071 None:intergenic 55.0%
GTGTGTGAGAGTAGCTTGGG+TGG + chr3.3:40513956-40513975 None:intergenic 55.0%
TAAGCAGCTGAAGGAGCTGC+AGG + chr3.3:40517813-40517832 None:intergenic 55.0%
TTAGCCAACCCACCCACAGA+CGG + chr3.3:40515960-40515979 None:intergenic 55.0%
TTGGACGAAGAGAGCGAGAG+GGG + chr3.3:40517032-40517051 None:intergenic 55.0%
! AAGGGAGAAGCGTGAGAGAG+TGG + chr3.3:40513917-40513936 None:intergenic 55.0%
! AGGCAGCCGGCATCATTTTG+CGG - chr3.3:40516195-40516214 MS.gene22024:CDS 55.0%
! CTGAGCGATGAGGGATTGGT+CGG + chr3.3:40514130-40514149 None:intergenic 55.0%
! GAGGAAGTTGGTCCTCTTGC+TGG - chr3.3:40514183-40514202 MS.gene22024:intron 55.0%
! GGTTTTTCTCCGTCTGTGGG+TGG - chr3.3:40515948-40515967 MS.gene22024:intron 55.0%
! TGGTGGGTCGAGGATACTTG+AGG - chr3.3:40514257-40514276 MS.gene22024:intron 55.0%
! TGTTGGTGAGAAGGGAGTGG+CGG + chr3.3:40514020-40514039 None:intergenic 55.0%
!! AGAGCTCTGAGCCATTGAGC+AGG - chr3.3:40518196-40518215 MS.gene22024:intron 55.0%
!! AGTAGCTTGGGTGGTGATGG+TGG + chr3.3:40513947-40513966 None:intergenic 55.0%
!! CGATGAGGGATTGGTCGGAA+GGG + chr3.3:40514125-40514144 None:intergenic 55.0%
!! GAGAGCGCCATACGAAGTCT+GGG - chr3.3:40515162-40515181 MS.gene22024:intron 55.0%
!! GGAGAGGGTGTTGGTGAGAA+GGG + chr3.3:40514028-40514047 None:intergenic 55.0%
!! GTGTGGGGTTAGTGTTGGTG+AGG - chr3.3:40515460-40515479 MS.gene22024:intron 55.0%
!! TGAGAGCGCCATACGAAGTC+TGG - chr3.3:40515161-40515180 MS.gene22024:intron 55.0%
!! TGGGTGGTGATGGTGGATGA+TGG + chr3.3:40513940-40513959 None:intergenic 55.0%
AACTGCAGCTGCCGATCCTC+CGG + chr3.3:40516124-40516143 None:intergenic 60.0%
AGCAGCTGAAGGAGCTGCAG+GGG + chr3.3:40517811-40517830 None:intergenic 60.0%
ATCCTCGACCCACCAGTCGA+CGG + chr3.3:40514252-40514271 None:intergenic 60.0%
ATTGGTCGGAAGGGAGGTGG+AGG + chr3.3:40514116-40514135 None:intergenic 60.0%
CCAAGGCAGGTAGTCCAGCT+AGG + chr3.3:40518783-40518802 None:intergenic 60.0%
CCTAGCTGGACTACCTGCCT+TGG - chr3.3:40518780-40518799 MS.gene22024:CDS 60.0%
CGACCAATCCCTCATCGCTC+AGG - chr3.3:40514128-40514147 MS.gene22024:intron 60.0%
CTCACCGCCGTCGCATCAAA+CGG + chr3.3:40514294-40514313 None:intergenic 60.0%
GAAGGAACGGAGGTGGGGTT+CGG + chr3.3:40514094-40514113 None:intergenic 60.0%
GACGGCGGTGAGGAGAGTTA+AGG - chr3.3:40514302-40514321 MS.gene22024:intron 60.0%
GAGGATTTGAGAGGGGGGTG+CGG + chr3.3:40513992-40514011 None:intergenic 60.0%
GATCCTCCGGATGATCCTCC+TGG + chr3.3:40516111-40516130 None:intergenic 60.0%
GCGGAGGGTGAGGATTTGAG+AGG + chr3.3:40514001-40514020 None:intergenic 60.0%
GCGTGAGAGAGTGGAACGTG+GGG + chr3.3:40513908-40513927 None:intergenic 60.0%
GGTCATGTGCCTGAGCGATG+AGG + chr3.3:40514140-40514159 None:intergenic 60.0%
GTGCCTGAGCGATGAGGGAT+TGG + chr3.3:40514134-40514153 None:intergenic 60.0%
GTGGAGGAAGGAACGGAGGT+GGG + chr3.3:40514100-40514119 None:intergenic 60.0%
TGAGCAGGCCACAGTACTGC+TGG - chr3.3:40518211-40518230 MS.gene22024:intron 60.0%
TGGAGGAAGGAACGGAGGTG+GGG + chr3.3:40514099-40514118 None:intergenic 60.0%
TTCTCCGTCTGTGGGTGGGT+TGG - chr3.3:40515953-40515972 MS.gene22024:intron 60.0%
! AGGGTGCCAGGAGGATCATC+CGG - chr3.3:40516102-40516121 MS.gene22024:CDS 60.0%
! CTGACATGCCGTCGACTGGT+GGG - chr3.3:40514241-40514260 MS.gene22024:intron 60.0%
! GAGAGCGAGAGGGGTACATG+AGG + chr3.3:40517023-40517042 None:intergenic 60.0%
! GGAACGTGGGGTTTGGAGTG+TGG + chr3.3:40513896-40513915 None:intergenic 60.0%
! GGGGGTGTGTGAGAGTAGCT+TGG + chr3.3:40513960-40513979 None:intergenic 60.0%
! TGGTGGAAGTGTGAGGCAGC+CGG - chr3.3:40516182-40516201 MS.gene22024:CDS 60.0%
!! AATGAGGTCGGTGGCGGAGA+GGG + chr3.3:40514043-40514062 None:intergenic 60.0%
!! CGGAGAGGGTGTTGGTGAGA+AGG + chr3.3:40514029-40514048 None:intergenic 60.0%
!! GCGATGAGGGATTGGTCGGA+AGG + chr3.3:40514126-40514145 None:intergenic 60.0%
!! GGATCGACTGGCCTTCCTGT+TGG - chr3.3:40518829-40518848 MS.gene22024:CDS 60.0%
!! GGGTGTTGGTGAGAAGGGAG+TGG + chr3.3:40514023-40514042 None:intergenic 60.0%
!! TGAGGGATTGGTCGGAAGGG+AGG + chr3.3:40514122-40514141 None:intergenic 60.0%
ACCGCCGTCGCATCAAACGG+CGG + chr3.3:40514291-40514310 None:intergenic 65.0%
ACGGCTGACATGCCGTCGAC+TGG - chr3.3:40514237-40514256 MS.gene22024:intron 65.0%
ATCGCTGCGGGGGAGGAAGT+TGG - chr3.3:40514171-40514190 MS.gene22024:intron 65.0%
CCTCGACCGCAGAATCGCTG+CGG - chr3.3:40514158-40514177 MS.gene22024:intron 65.0%
CGGCAGCTGCAGTTTCTGCC+AGG - chr3.3:40516130-40516149 MS.gene22024:CDS 65.0%
CGTTTGATGCGACGGCGGTG+AGG - chr3.3:40514292-40514311 MS.gene22024:intron 65.0%
CTCGACCGCAGAATCGCTGC+GGG - chr3.3:40514159-40514178 MS.gene22024:intron 65.0%
GGAGGTGGAGGAAGGAACGG+AGG + chr3.3:40514104-40514123 None:intergenic 65.0%
GGTGGAGGAAGGAACGGAGG+TGG + chr3.3:40514101-40514120 None:intergenic 65.0%
GTCGGAAGGGAGGTGGAGGA+AGG + chr3.3:40514112-40514131 None:intergenic 65.0%
GTGCCAGGAGGATCATCCGG+AGG - chr3.3:40516105-40516124 MS.gene22024:CDS 65.0%
TCGACCGCAGAATCGCTGCG+GGG - chr3.3:40514160-40514179 MS.gene22024:intron 65.0%
TCGGCCGCCGTTTGATGCGA+CGG - chr3.3:40514284-40514303 MS.gene22024:intron 65.0%
TGGTGAGAAGGGAGTGGCGG+AGG + chr3.3:40514017-40514036 None:intergenic 65.0%
! AGGGGGGTGCGGTTGTAGGT+TGG + chr3.3:40513981-40514000 None:intergenic 65.0%
! GCTGACATGCCGTCGACTGG+TGG - chr3.3:40514240-40514259 MS.gene22024:intron 65.0%
! GGGGGGTGCGGTTGTAGGTT+GGG + chr3.3:40513980-40513999 None:intergenic 65.0%
! GGGGGTGCGGTTGTAGGTTG+GGG + chr3.3:40513979-40513998 None:intergenic 65.0%
! GGGGTGCGGTTGTAGGTTGG+GGG + chr3.3:40513978-40513997 None:intergenic 65.0%
! GGTGAGAAGGGAGTGGCGGA+GGG + chr3.3:40514016-40514035 None:intergenic 65.0%
! TGAGAGGGGGGTGCGGTTGT+AGG + chr3.3:40513985-40514004 None:intergenic 65.0%
!! GAATGAGGTCGGTGGCGGAG+AGG + chr3.3:40514044-40514063 None:intergenic 65.0%
!! GGAGGTGGGGTTCGGTGAGA+CGG + chr3.3:40514086-40514105 None:intergenic 65.0%
!! GGGATTGGTCGGAAGGGAGG+TGG + chr3.3:40514119-40514138 None:intergenic 65.0%
CCGCAGCGATTCTGCGGTCG+AGG + chr3.3:40514161-40514180 None:intergenic 70.0%
CCTCCCCCGCAGCGATTCTG+CGG + chr3.3:40514167-40514186 None:intergenic 70.0%
CGACCGCAGAATCGCTGCGG+GGG - chr3.3:40514161-40514180 MS.gene22024:intron 70.0%
GAGACGGAGGCGGGTGAGGT+GGG + chr3.3:40514070-40514089 None:intergenic 70.0%
GCCGCCGTTTGATGCGACGG+CGG - chr3.3:40514287-40514306 MS.gene22024:intron 70.0%
TGAGACGGAGGCGGGTGAGG+TGG + chr3.3:40514071-40514090 None:intergenic 70.0%
! GAAGGGAGTGGCGGAGGGTG+AGG + chr3.3:40514011-40514030 None:intergenic 70.0%
! TGCCGTCGACTGGTGGGTCG+AGG - chr3.3:40514247-40514266 MS.gene22024:intron 70.0%
!! GGGGTTCGGTGAGACGGAGG+CGG + chr3.3:40514080-40514099 None:intergenic 70.0%
!! GGGTTCGGTGAGACGGAGGC+GGG + chr3.3:40514079-40514098 None:intergenic 70.0%
!! GGTGGGGTTCGGTGAGACGG+AGG + chr3.3:40514083-40514102 None:intergenic 70.0%
!! GTCGGTGGCGGAGAGGGTGT+TGG + chr3.3:40514037-40514056 None:intergenic 70.0%
CCGCAGAATCGCTGCGGGGG+AGG - chr3.3:40514164-40514183 MS.gene22024:intron 75.0%
CGGTGAGACGGAGGCGGGTG+AGG + chr3.3:40514074-40514093 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 40513880 40518948 40513880 ID=MS.gene22024
chr3.3 mRNA 40513880 40518948 40513880 ID=MS.gene22024.t1;Parent=MS.gene22024
chr3.3 exon 40518424 40518948 40518424 ID=MS.gene22024.t1.exon1;Parent=MS.gene22024.t1
chr3.3 CDS 40518424 40518948 40518424 ID=cds.MS.gene22024.t1;Parent=MS.gene22024.t1
chr3.3 exon 40516442 40516753 40516442 ID=MS.gene22024.t1.exon2;Parent=MS.gene22024.t1
chr3.3 CDS 40516442 40516753 40516442 ID=cds.MS.gene22024.t1;Parent=MS.gene22024.t1
chr3.3 exon 40516042 40516221 40516042 ID=MS.gene22024.t1.exon3;Parent=MS.gene22024.t1
chr3.3 CDS 40516042 40516221 40516042 ID=cds.MS.gene22024.t1;Parent=MS.gene22024.t1
chr3.3 exon 40515823 40515917 40515823 ID=MS.gene22024.t1.exon4;Parent=MS.gene22024.t1
chr3.3 CDS 40515823 40515917 40515823 ID=cds.MS.gene22024.t1;Parent=MS.gene22024.t1
chr3.3 exon 40515608 40515683 40515608 ID=MS.gene22024.t1.exon5;Parent=MS.gene22024.t1
chr3.3 CDS 40515608 40515683 40515608 ID=cds.MS.gene22024.t1;Parent=MS.gene22024.t1
chr3.3 exon 40515383 40515460 40515383 ID=MS.gene22024.t1.exon6;Parent=MS.gene22024.t1
chr3.3 CDS 40515383 40515460 40515383 ID=cds.MS.gene22024.t1;Parent=MS.gene22024.t1
chr3.3 exon 40514988 40515081 40514988 ID=MS.gene22024.t1.exon7;Parent=MS.gene22024.t1
chr3.3 CDS 40514988 40515081 40514988 ID=cds.MS.gene22024.t1;Parent=MS.gene22024.t1
chr3.3 exon 40514854 40514903 40514854 ID=MS.gene22024.t1.exon8;Parent=MS.gene22024.t1
chr3.3 CDS 40514854 40514903 40514854 ID=cds.MS.gene22024.t1;Parent=MS.gene22024.t1
chr3.3 exon 40513880 40514059 40513880 ID=MS.gene22024.t1.exon9;Parent=MS.gene22024.t1
chr3.3 CDS 40513880 40514059 40513880 ID=cds.MS.gene22024.t1;Parent=MS.gene22024.t1
Gene Sequence

>MS.gene22024

ATGAAAATGCTATCCACACTCCAAACCCCACGTTCCACTCTCTCACGCTTCTCCCTTCCATCATCCACCATCACCACCCAAGCTACTCTCACACACCCCCAACCTACAACCGCACCCCCCTCTCAAATCCTCACCCTCCGCCACTCCCTTCTCACCAACACCCTCTCCGCCACCGACCTCATTCAATCCCACCTCACCCGCCTCCGTCTCACCGAACCCCACCTCCGTTCCTTCCTCCACCTCCCTTCCGACCAATCCCTCATCGCTCAGGCACATGACCTCGACCGCAGAATCGCTGCGGGGGAGGAAGTTGGTCCTCTTGCTGGTGTTCTTGTTGCTGTTAAGGATAATATATGTACGGCTGACATGCCGTCGACTGGTGGGTCGAGGATACTTGAGGGTTATCGGCCGCCGTTTGATGCGACGGCGGTGAGGAGAGTTAAGGAGTTGGGTGGGATTGTTGTTGGGAAGACGAATATGGATGAGTTTGGTATGGGGAGTACCACTGAAGCTTCTGCATTTCAGGTTCTTACCCTCTCTTTATATATATTTTCAATTTCAAGTTTGTTTTTTTATGTTTATTCATATACCTTATTTGAAACTTTGAACCATAATTTAAATTTTAAAGTGAATATTAATCTCAGGTTCTCTGAGTGTGTTAATGTTAATCTGAAGTTAGTTTTTTTTGTTTTGTTTGGCACACCACAATTTAGGTCCTTGAAAGTATAACTTGCTGTCATATTGGTCTCTGAATGTATTGATGTTGCAAACACATCCACAAGTGCATTTTTTATTAGTCATTTTAGTCCTCAAATCTGTTTTTAGGTTGTCAATTTAATCTTTGAATGTGTTTTTCCTTGGTTAATTTAGTCCTTAAAATTACTGTCAAATTAGGTGCTAGGGATGTGTTTGCAATTTCAATAAATTTAGGGACTATAGCTACATCGTCTCATACGTTCCTAGTTAATTTTATTTCAATTCATTTTAAGTAAACCACCAAACCAGTCTCTGACTTTGTAGGGCGTTCTCAGATAGGTCTCTGAGATTATGAGTGTTTGAAAAAAGGTTCGTGACTCTGTTAAATTTTACTCTCATATTATATCTTCTGAGTATGTTAGGGACTAAATTGATAGTAAGCGGTTAAATGTAGGGAATAAATTGATGGTAAGTTGTTAAAATATAGGGACCTAATTGATAGCAAGTGGTTAAATAAAGGGATCAATTTGAAAGTTTAATAGAGTCGGTGACTTTTTCAAATATTTATAATGTCAGGGACCTATTTGAGAGCGCCATACGAAGTCTGGGACTAGTTTGGTGGTTTATTAAATCCATTTCATATTCTTTTTTTGCTGTGTTGTAGTGCATTTCTGTTTTGGTTTTTTTTTTTTTTATCCGGTAGTTGTTTGTTTGTTTGTTTGTTTTGTTGATTTTGAAGATCAGTGTGTTTTTGTTTTCCAGTTTGGGTGGACATTTAAGCTGAATTAAAATTTAGTTTGTATGCTACCCTTGTTTTTTGAACTTTTAGATATATATTTTATAATTGTTGATGATTTTAATATGAGAGATTCTTAGATACATTAGTGTGGGGTTAGTGTTGGTGAGGAAATCATGATGTTTGATGATCCATTTGGCTGATGTCAGTCATGTTGAGCGGTGTGATAAAAGAATAGTGTCGTATGCTAGGTGCATCTAAGAATGTCTCCTCTCAAATTTCAAATGTCCAGTTTGTAATGTTAGTAGTAAATGTGAGAAGGTTTGAGTGGTGACATTATGTGGTTACTTGATTCAGATATCTTGTGTTTAACAATTGAATTAAATTTGTGAGCATGGGTTCCAGCATTTATTTGGAGAGAAAATGAGAAGAATGAAAATTGCAAATCGGATATCCTACAGTTGCTTTATGGGGCAGCAGCTATGGAGACCATTATATTTAAGACGTAGAGAGAGATTGTAGAAGATCTGAGTCAGCTGAAAATTGTTGACGAATGACCTGATGGATGCATAATGTGATGCATTGCTAAATTTGTATTTTTGTCATTACAAAACATACAAAAAGTGGGGTTGTGCTGGTTTTTCTCCGTCTGTGGGTGGGTTGGCTAAGCTTTGATAGAGTTCTGTTTGTAGCTTTATTACTTGTATCGCCCATTTATAACTGAGATATGTTTACTCAGGTGATGCATATGTTAATTCAATAGGTGACTGCCAACCCGTGGGATGTTAATAGGGTGCCAGGAGGATCATCCGGAGGATCGGCAGCTGCAGTTTCTGCCAGGCAATGTGTTGTATCGTTGGGAAGTGATACTGGTGGAAGTGTGAGGCAGCCGGCATCATTTTGCGGTGTTGTAGGTTTGAAGCCAACATATGGGCGCGTCTCAAGATTTGGACTCATGGCGTATGCGTCATCACTTGATGCCATTGGCTGCTTTGGTTCATCTGTCGCTGATGCTGGGATTCTCCTCCATGCAATTGCTGGTCATGATAGATTTGATGCCACATCAAGTAAGCAGGTATGAGTTTTTCACCATGTTTGGTAAAAATGTTGTTAGCTTTCTTTTTTTCATTATTAGCAATGGTCATTGACGACAATGTTTGGTATAGTCTCGGGCTCTTTGTTAAATATGAAGGGTAATTGCTTAAGTTGTTCTTGTGTTCATTTGTTTTGTTACCTTGTTATTAAGCCAATTAATTGCCTTTTAACAATGAATAGCTAACAATGTAATTTATCAGGAGGTGCCCAATTTTCTATCTCATTTTGACTATGCAAGTTCTTTGGAAAGTAAGCCCTTGAAAGGACTGAGAATTGGTTTGATTCGTGAAACTATTGAAGATGGTGTTGATGCTGGAGTAGTTTCTGCAATTCGTGATGCTGCTTCACATTTTCAGGCATTAGGATGCTCTGTGAACGAGGTCCTCCACTTCATTTTTCTCTATAACTCTGATCTGAATGATAATTTTTTAAGTTGCTTTACAAGCTTATGTTATTAGAATTCATTTGTTAGTTAACCCTTTTCATCTGTCCATTAACTTACAGGTGTCACTGCCATCCTTTTCACTTGGGTTGCCAGCATACTATGTCCTCGCTTTGTCTGAATCATCTTCCAACTTGTCTCGCTATGATGGTATTAGGTCAGTGGCTGACTCCTCATGTACCCCTCTCGCTCTCTTCGTCCAAATACACACAACCGAACACAATGTTTTATTTTGTGTTGTTTATTTTCATTGATAATCATTTTGTTTGGCTTGGGTCCACCTTCTCTATATCTAGATATGGAAACCAAGTTTATGCTGACGAGCTAGACTCTCTCTATGGTGAATCCCGAGCCAAAGGGTTAGGTTCTGAGGTACACACCTTTCAATCCTTCTTAATTTCAAATTTGGCTGCAAGATTTTTGATAGCATTATGTGTAAATATACCTGTATAAAAGAATTGATCCAATTTTATATGCATTGGTATTTTGAGCTGGCTTTCTATTTTTAATACATTTCAGGTGAAAATGAGAATTTTGATGGGGACATATGCCCTTTCAGCTGGTTACTATGATGCATATTACAAACGAGCGCAGCAGGTACTGCTAACTTTATTTTATGTTTTTCTTGGTGGGTCTGATATACCTCTCGGTTCTTCTTAACCCAATGATAATGAATTCAGTCACAGGACTCAGATTAATATATGTTGCTTAAAGAAATTTATAATGTTTCACGATTTCATTCATACACGATATACGTCCACTCCTGTTCTTTACGCGTCTTTTAGAATATGATTAAACTCTTGCTTCATTTCCTAGGTTGTCTTATCAGCGTTCTGAATTTCATTTATTTTAGAAGTTTGGGATCTACAAGGCCTTTTATGCGTGTTCTATGTAACAGGTGAGAACCATTATAAGGAATAGCTTCAAGGAAGCGCTGGACCAATATGATATCTTGATTTCCCCTGCAGCTCCTTCAGCTGCTTATAAAATTGGTTAGCACCTGTGTAGCTTTCCTTTTGCATTATTGCATGTTAGTGCCTGTAATTGTAATCGTTCTCTTTCTTTGACATTTGCAGGTGAAAAGAAAAATGATCCTTTGGCTATGTATGCTGGTGACATCATGACTGTAAGTATTTCATTCTTCTTATTGGCTAGATTTCTGTGTCATACTTCTGAATTCCGATCTCATTATATGTTGTTAATGTTAACTAGACAAATAATGTTAATCATATGTTAATGTTAACTAGACAAATAGTGTTAGTTTGAGGTTTGGAGTTGTACTATTGAACTTCAACTCCATTGAAATTAAACTTGATTCATACACGAGTACGAGTTACTAAAGTTTATAGAGCTCTGAGCCATTGAGCAGGCCACAGTACTGCTGGTTTATGCCTTAGATGGTATATATTCAATCTAAACAATCCAAGAAATATCTTAATTAATCAATAACTGCCGGGTCGTTGCATATTGTAGTACCTTAACATGTGTCAAGTATATATCATTGTGAGTTCTAGACTTCTAGTTACTCCATAAAGGAGTATCCCAGCGAATGAAGTCATCAGTTAGCATAAGCTGTGTTGAATTAGAGAAAATAGAGGCATGATTTTGAAACCGTGTCTCAACTACACAGCAGAGTCAATTTTATATAGGCTAAAGACAATAAATACAACATAAATATTGGAGATATTTTTCTTATTTACTTTATGTGCTATGATACAATATGCCTAAACAATAATCCTATACAATAAATATAGAGACGTGAATAATTTTTCAACAAGTTGCATAACTAGTTATGCACCCAGTGGTTTAGAGAGTTTGATCTTTATGCATTATCTGTAATTTTATTTCTAGCTACTCAGTTTACATGAAATGCCGAGCATAATGTTTGCTTTTCTTTATTGGTGGTTTTTCTTTTTATAGGTAAATGTCAACCTAGCTGGACTACCTGCCTTGGTTTTACCATGTGGATTTATTGAGAATGGATCGACTGGCCTTCCTGTTGGCCTGCAAATGATTGGTGCAGCATTTAATGAGGTATTGAGTTTTCTTATGAACTACACTAAACTTCGTGTTGACGGGGCTTCTCTATGCATCTTCTAG
Protein sequence

>MS.gene22024.t1

MKMLSTLQTPRSTLSRFSLPSSTITTQATLTHPQPTTAPPSQILTLRHSLLTNTLSATDLIQSHLTRLRLTEPHLRSFLHLPSDQSLIAQAHDLDRRIAAGEEVGPLAGVLVAVKDNICTADMPSTGGSRILEGYRPPFDATAVRRVKELGGIVVGKTNMDEFGMGSTTEASAFQVTANPWDVNRVPGGSSGGSAAAVSARQCVVSLGSDTGGSVRQPASFCGVVGLKPTYGRVSRFGLMAYASSLDAIGCFGSSVADAGILLHAIAGHDRFDATSSKQEVPNFLSHFDYASSLESKPLKGLRIGLIRETIEDGVDAGVVSAIRDAASHFQALGCSVNEVSLPSFSLGLPAYYVLALSESSSNLSRYDGIRYGNQVYADELDSLYGESRAKGLGSEVKMRILMGTYALSAGYYDAYYKRAQQVRTIIRNSFKEALDQYDILISPAAPSAAYKIGEKKNDPLAMYAGDIMTVNVNLAGLPALVLPCGFIENGSTGLPVGLQMIGAAFNEVLSFLMNYTKLRVDGASLCIF