Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22026.t1 | XP_003599916.1 | 99.2 | 518 | 4 | 0 | 1 | 518 | 1 | 518 | 2.10E-292 | 1014.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22026.t1 | P49299 | 78.9 | 516 | 105 | 2 | 5 | 518 | 3 | 516 | 1.0e-234 | 813.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22026.t1 | G7IZY5 | 99.2 | 518 | 4 | 0 | 1 | 518 | 1 | 518 | 1.5e-292 | 1014.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene22026 | MS.gene68895 | PPI |
MS.gene22026 | MS.gene57427 | PPI |
MS.gene22026 | MS.gene28100 | PPI |
MS.gene22026 | MS.gene52387 | PPI |
MS.gene22026 | MS.gene004536 | PPI |
MS.gene22026 | MS.gene95617 | PPI |
MS.gene22026 | MS.gene030781 | PPI |
MS.gene22026 | MS.gene84175 | PPI |
MS.gene22026 | MS.gene00278 | PPI |
MS.gene22026 | MS.gene94677 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22026.t1 | MTR_3g048920 | 99.228 | 518 | 4 | 0 | 1 | 518 | 1 | 518 | 0.0 | 1051 |
MS.gene22026.t1 | MTR_5g091930 | 84.369 | 499 | 73 | 2 | 18 | 516 | 15 | 508 | 0.0 | 879 |
MS.gene22026.t1 | MTR_3g051920 | 75.000 | 88 | 22 | 0 | 1 | 88 | 3 | 90 | 3.32e-38 | 140 |
MS.gene22026.t1 | MTR_2g061630 | 27.013 | 385 | 241 | 14 | 115 | 474 | 90 | 459 | 1.28e-26 | 113 |
MS.gene22026.t1 | MTR_2g061630 | 28.512 | 242 | 150 | 9 | 115 | 343 | 90 | 321 | 7.03e-16 | 79.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22026.t1 | AT2G42790 | 77.451 | 510 | 112 | 2 | 10 | 518 | 2 | 509 | 0.0 | 828 |
MS.gene22026.t1 | AT3G58750 | 77.778 | 504 | 109 | 1 | 16 | 516 | 8 | 511 | 0.0 | 826 |
MS.gene22026.t1 | AT3G58740 | 68.958 | 480 | 145 | 1 | 10 | 489 | 2 | 477 | 0.0 | 699 |
MS.gene22026.t1 | AT2G44350 | 25.445 | 393 | 255 | 14 | 115 | 484 | 91 | 468 | 5.06e-25 | 108 |
MS.gene22026.t1 | AT2G44350 | 25.445 | 393 | 255 | 14 | 115 | 484 | 91 | 468 | 5.06e-25 | 108 |
MS.gene22026.t1 | AT2G44350 | 25.445 | 393 | 255 | 14 | 115 | 484 | 90 | 467 | 5.31e-25 | 108 |
MS.gene22026.t1 | AT2G44350 | 25.445 | 393 | 255 | 14 | 115 | 484 | 90 | 467 | 5.31e-25 | 108 |
MS.gene22026.t1 | AT3G60100 | 25.635 | 394 | 252 | 16 | 115 | 483 | 87 | 464 | 1.25e-24 | 107 |
MS.gene22026.t1 | AT3G60100 | 25.635 | 394 | 247 | 17 | 115 | 483 | 87 | 459 | 4.75e-23 | 102 |
MS.gene22026.t1 | AT3G60100 | 25.291 | 344 | 223 | 12 | 115 | 436 | 87 | 418 | 2.20e-20 | 94.0 |
Find 147 sgRNAs with CRISPR-Local
Find 325 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCCACCTCTCCGCTTCTTC+TGG | 0.134535 | 3.3:+40495251 | MS.gene22026:CDS |
AAACAAATAGTGCGGATTAT+TGG | 0.256194 | 3.3:+40498157 | MS.gene22026:CDS |
AAACGAAAGCTCAGTGGTTT+TGG | 0.263084 | 3.3:+40499457 | MS.gene22026:CDS |
ACTTGATACAGGTCTTTCTT+TGG | 0.283790 | 3.3:-40500476 | None:intergenic |
GGCTGAGAAAAGCACCTTTC+CGG | 0.284786 | 3.3:+40495989 | MS.gene22026:CDS |
AGGGTGGAGGAGCGCGGCGG+AGG | 0.292483 | 3.3:-40495228 | None:intergenic |
AAGAGGCGGCTTGCTGGATC+TGG | 0.293362 | 3.3:+40500547 | MS.gene22026:CDS |
GAGCGCGGCGGAGGAGGTGG+TGG | 0.294602 | 3.3:-40495219 | None:intergenic |
GCCTCAAAGAGGCGGCTTGC+TGG | 0.300425 | 3.3:+40500541 | MS.gene22026:CDS |
CTCAAGATGCTGAGTGAAAT+TGG | 0.312014 | 3.3:+40499242 | MS.gene22026:CDS |
TTCTCAGCCAACTCCTCAAT+TGG | 0.324574 | 3.3:-40495975 | None:intergenic |
GGTCTCATAATCTTTGTATC+AGG | 0.327095 | 3.3:-40500157 | None:intergenic |
GAGGAGCGCGGCGGAGGAGG+TGG | 0.327253 | 3.3:-40495222 | None:intergenic |
AGCTTTACCACAGGGTGTTT+TGG | 0.328277 | 3.3:+40496725 | MS.gene22026:CDS |
CCAAATGTTGACTTCTACTC+TGG | 0.330372 | 3.3:+40499920 | MS.gene22026:CDS |
AATCACCTTCTTGAAATCAT+TGG | 0.330878 | 3.3:-40495375 | None:intergenic |
CTTGAAATCATTGGCTTTGA+CGG | 0.332214 | 3.3:-40495366 | None:intergenic |
TCAACAATTTCTTATATTGA+TGG | 0.338960 | 3.3:+40495921 | MS.gene22026:CDS |
TTTCTTTGGTTGGTGCATAA+TGG | 0.343621 | 3.3:-40500462 | None:intergenic |
TCCACCTCTCCGCTTCTTCT+GGG | 0.345972 | 3.3:+40495252 | MS.gene22026:CDS |
GTGGAGGAGCGCGGCGGAGG+AGG | 0.350492 | 3.3:-40495225 | None:intergenic |
TTTGCTTTGCAGATATCAAC+TGG | 0.364371 | 3.3:+40495837 | MS.gene22026:intron |
CCCTCGTATGGCTGGATACT+TGG | 0.364953 | 3.3:+40500108 | MS.gene22026:CDS |
TCTACTCTGGATTAATATAT+AGG | 0.366202 | 3.3:+40499933 | MS.gene22026:CDS |
TTGGGTATCCTCTATATCTA+AGG | 0.367156 | 3.3:-40495956 | None:intergenic |
GCCTCAAGATGCACATCCTA+TGG | 0.381113 | 3.3:+40497375 | MS.gene22026:CDS |
AAGCGGAGAGGTGGAGAGGG+TGG | 0.388248 | 3.3:-40495244 | None:intergenic |
GGCACATTGGCGGGAGTCCT+TGG | 0.394748 | 3.3:+40500129 | MS.gene22026:CDS |
TGTATACGATTTCAGGGCTA+TGG | 0.395691 | 3.3:+40500048 | MS.gene22026:intron |
TTATGTTCCAGGTATATGTT+GGG | 0.406887 | 3.3:+40500428 | MS.gene22026:intron |
CCAGAGTAGAAGTCAACATT+TGG | 0.408985 | 3.3:-40499920 | None:intergenic |
AGGTGGTGGAGGTAGGAAGC+AGG | 0.411316 | 3.3:-40495205 | None:intergenic |
GATGTATACACTGCTATTGC+TGG | 0.419929 | 3.3:+40499049 | MS.gene22026:CDS |
TGCTGCGATTAATCTTAGAT+TGG | 0.420662 | 3.3:+40498318 | MS.gene22026:CDS |
CGCGGCGGAGGAGGTGGTGG+AGG | 0.421471 | 3.3:-40495216 | None:intergenic |
TCCAAGTCAGTTACAAGAAT+GGG | 0.426433 | 3.3:+40496680 | MS.gene22026:CDS |
GCTCTGTATGGACCTCTTCA+TGG | 0.430163 | 3.3:+40499082 | MS.gene22026:CDS |
TTTGCTATCCCTCGTATGGC+TGG | 0.434207 | 3.3:+40500100 | MS.gene22026:CDS |
TCCAGCAAGCCGCCTCTTTG+AGG | 0.434684 | 3.3:-40500542 | None:intergenic |
TTTATGTTCCAGGTATATGT+TGG | 0.436390 | 3.3:+40500427 | MS.gene22026:intron |
GTGTTACTTCCACTTGATAC+AGG | 0.442978 | 3.3:-40500487 | None:intergenic |
TGCACGAGTTAGACGAGGAT+TGG | 0.445193 | 3.3:-40498777 | None:intergenic |
CGGAGAGGTGGAGAGGGTGG+AGG | 0.450743 | 3.3:-40495241 | None:intergenic |
GCACGAGTTAGACGAGGATT+GGG | 0.451948 | 3.3:-40498776 | None:intergenic |
TCTCAGCCAACTCCTCAATT+GGG | 0.452720 | 3.3:-40495974 | None:intergenic |
AGCTTGTTAGATGGAAGAAC+AGG | 0.452837 | 3.3:-40498352 | None:intergenic |
GGAGCAGTGTTTAAATATCC+AGG | 0.455528 | 3.3:-40495891 | None:intergenic |
GTGTAAGAAAGCTTGTTAGA+TGG | 0.457343 | 3.3:-40498361 | None:intergenic |
GATACAGGTCTTTCTTTGGT+TGG | 0.460073 | 3.3:-40500472 | None:intergenic |
TATGCAGGTTGCTGTTGCCT+TGG | 0.464196 | 3.3:+40499850 | MS.gene22026:intron |
AGGATACCCAATTGAGGAGT+TGG | 0.469154 | 3.3:+40495968 | MS.gene22026:CDS |
TGGATACTTGGCACATTGGC+GGG | 0.471996 | 3.3:+40500120 | MS.gene22026:CDS |
ACCGTTGTTGATGAACGTAC+TGG | 0.472528 | 3.3:+40495308 | MS.gene22026:CDS |
TTTATTTGCTATCCCTCGTA+TGG | 0.475056 | 3.3:+40500096 | MS.gene22026:CDS |
AGCGTTCCTTTGACATTGGA+CGG | 0.476214 | 3.3:-40495284 | None:intergenic |
TCTTATATTGATGGTGATGA+GGG | 0.476694 | 3.3:+40495930 | MS.gene22026:CDS |
CTCCAAGTCAGTTACAAGAA+TGG | 0.477613 | 3.3:+40496679 | MS.gene22026:CDS |
GGTGAGCGTTCCTTTGACAT+TGG | 0.478015 | 3.3:-40495288 | None:intergenic |
AAAGATTATGAGACCTCAAC+AGG | 0.478244 | 3.3:+40500165 | MS.gene22026:CDS |
TTGGCTTTGACGGTGCCATC+AGG | 0.479200 | 3.3:-40495356 | None:intergenic |
TCATTGAGGGTGTTAAAGCC+AGG | 0.481435 | 3.3:+40499288 | MS.gene22026:CDS |
CTGAGAGCAGGATTTGCATC+AGG | 0.486015 | 3.3:-40497439 | None:intergenic |
ACTGCTATTGCTGGTGGAGT+AGG | 0.488657 | 3.3:+40499058 | MS.gene22026:CDS |
CATATGAGATATGACACTTC+CGG | 0.491125 | 3.3:-40496008 | None:intergenic |
GAGCAGTGAGGGTGGATAAA+CGG | 0.494325 | 3.3:-40495181 | None:intergenic |
GCTGCGATTAATCTTAGATT+GGG | 0.498832 | 3.3:+40498319 | MS.gene22026:CDS |
CAATTTCACTCAGCATCTTG+AGG | 0.502324 | 3.3:-40499241 | None:intergenic |
GCGGAGGAGGTGGTGGAGGT+AGG | 0.502506 | 3.3:-40495212 | None:intergenic |
GTATACGATTTCAGGGCTAT+GGG | 0.507227 | 3.3:+40500049 | MS.gene22026:intron |
AAGAAGCGGAGAGGTGGAGA+GGG | 0.511382 | 3.3:-40495247 | None:intergenic |
TCCCAGAAGAAGCGGAGAGG+TGG | 0.511422 | 3.3:-40495253 | None:intergenic |
TCCCATTCTTGTAACTGACT+TGG | 0.512163 | 3.3:-40496681 | None:intergenic |
AATAGTGCGGATTATTGGAA+AGG | 0.516235 | 3.3:+40498162 | MS.gene22026:CDS |
GAGTTACTTACTCTGAGAGC+AGG | 0.517899 | 3.3:-40497451 | None:intergenic |
TTCTTATATTGATGGTGATG+AGG | 0.518608 | 3.3:+40495929 | MS.gene22026:CDS |
TCCTCGTCTAACTCGTGCAC+TGG | 0.521732 | 3.3:+40498781 | MS.gene22026:CDS |
AGGAAGCAGGTGAGCAGTGA+GGG | 0.522168 | 3.3:-40495192 | None:intergenic |
AACATTCCAGAGTTCATTGA+GGG | 0.523801 | 3.3:+40499275 | MS.gene22026:CDS |
CTGGATACTTGGCACATTGG+CGG | 0.525933 | 3.3:+40500119 | MS.gene22026:CDS |
GGTGGAGTAGGAGCTCTGTA+TGG | 0.529103 | 3.3:+40499070 | MS.gene22026:CDS |
GAGAGGGTGGAGGAGCGCGG+CGG | 0.529792 | 3.3:-40495231 | None:intergenic |
CAGAGGATCCCGGCCAACAA+TGG | 0.531358 | 3.3:-40499548 | None:intergenic |
GAGGGGATCCTTAGATATAG+AGG | 0.533890 | 3.3:+40495948 | MS.gene22026:CDS |
TTAATCTTAGATTGGGAGGA+AGG | 0.535401 | 3.3:+40498326 | MS.gene22026:CDS |
TTAACACCCTCAATGAACTC+TGG | 0.537652 | 3.3:-40499281 | None:intergenic |
TCTTCATGGTGGAGCTAATG+AGG | 0.538932 | 3.3:+40499096 | MS.gene22026:CDS |
TAAGAAATTGTTGATCGCAC+AGG | 0.539966 | 3.3:-40495912 | None:intergenic |
CTGTACGCCACCTTGCATCA+AGG | 0.543163 | 3.3:+40498855 | MS.gene22026:CDS |
CCGTTGTTGATGAACGTACT+GGG | 0.553503 | 3.3:+40495309 | MS.gene22026:CDS |
TGGCCGGGATCCTCTGATAG+AGG | 0.553714 | 3.3:+40499555 | MS.gene22026:CDS |
GGAAGTAACACCGACAAGCT+TGG | 0.554782 | 3.3:+40500499 | MS.gene22026:CDS |
ATCTAACAAGCTTTCTTACA+CGG | 0.556130 | 3.3:+40498363 | MS.gene22026:CDS |
ACAGAGAATCAAGCATGTAA+AGG | 0.560999 | 3.3:-40498393 | None:intergenic |
GTGGAGAGGGTGGAGGAGCG+CGG | 0.563453 | 3.3:-40495234 | None:intergenic |
AGAGGCGGCTTGCTGGATCT+GGG | 0.566520 | 3.3:+40500548 | MS.gene22026:CDS |
TCAACACTCAGCTTTACCAC+AGG | 0.567669 | 3.3:+40496716 | MS.gene22026:CDS |
AGATAGCTGACCAAGCTTGT+CGG | 0.568538 | 3.3:-40500509 | None:intergenic |
TGGCTGGATACTTGGCACAT+TGG | 0.571393 | 3.3:+40500116 | MS.gene22026:CDS |
AAAGAAAGACCTGTATCAAG+TGG | 0.571736 | 3.3:+40500478 | MS.gene22026:CDS |
TGGAGAGATCCCAGAAGAAG+CGG | 0.573769 | 3.3:-40495261 | None:intergenic |
CGAAGATGCACGACGCTGCA+CGG | 0.573848 | 3.3:+40495156 | MS.gene22026:CDS |
TCTTGTAACTGACTTGGAGA+AGG | 0.579517 | 3.3:-40496675 | None:intergenic |
GAAGAAGCGGAGAGGTGGAG+AGG | 0.581479 | 3.3:-40495248 | None:intergenic |
AAGCAGGTGAGCAGTGAGGG+TGG | 0.589658 | 3.3:-40495189 | None:intergenic |
CCTCAAGATGCACATCCTAT+GGG | 0.593639 | 3.3:+40497376 | MS.gene22026:CDS |
TCTCCACCGTCCAATGTCAA+AGG | 0.601407 | 3.3:+40495278 | MS.gene22026:CDS |
GCGATTAATCTTAGATTGGG+AGG | 0.603867 | 3.3:+40498322 | MS.gene22026:CDS |
CAAAGCCAATGATTTCAAGA+AGG | 0.604210 | 3.3:+40495370 | MS.gene22026:CDS |
TAACATTCCAGAGTTCATTG+AGG | 0.608264 | 3.3:+40499274 | MS.gene22026:CDS |
AAACTATGATCCTAGAGCAA+AGG | 0.608521 | 3.3:+40499495 | MS.gene22026:CDS |
GAGATATGACACTTCCGGAA+AGG | 0.610123 | 3.3:-40496003 | None:intergenic |
GGACTCAAACTTTATGACCC+TGG | 0.610890 | 3.3:+40495873 | MS.gene22026:CDS |
TCATTAGCTCCACCATGAAG+AGG | 0.611745 | 3.3:-40499094 | None:intergenic |
CCCATAGGATGTGCATCTTG+AGG | 0.613545 | 3.3:-40497376 | None:intergenic |
TATGTTCCAGGTATATGTTG+GGG | 0.614530 | 3.3:+40500429 | MS.gene22026:intron |
GCATTAACAAGTACACCCAT+AGG | 0.615591 | 3.3:-40497391 | None:intergenic |
AGTATTGAAGTCTCTCCTGA+TGG | 0.615879 | 3.3:+40495341 | MS.gene22026:CDS |
TCCAGGTATATGTTGGGGAA+TGG | 0.616440 | 3.3:+40500434 | MS.gene22026:intron |
GTATACACTGCTATTGCTGG+TGG | 0.619402 | 3.3:+40499052 | MS.gene22026:CDS |
AGAAAGGAAATAACCTGTTG+AGG | 0.620319 | 3.3:-40500178 | None:intergenic |
TGGATAAACACCTCTATCAG+AGG | 0.620328 | 3.3:-40499565 | None:intergenic |
AGACAGAGCAATCTTCTCCA+AGG | 0.621742 | 3.3:-40499867 | None:intergenic |
TTGTTAGATGGAAGAACAGG+TGG | 0.622304 | 3.3:-40498349 | None:intergenic |
GAGAGATCTACCTTGATGCA+AGG | 0.625076 | 3.3:-40498865 | None:intergenic |
ACACCTCTATCAGAGGATCC+CGG | 0.625194 | 3.3:-40499558 | None:intergenic |
CTTATATTGATGGTGATGAG+GGG | 0.628137 | 3.3:+40495931 | MS.gene22026:CDS |
CTTTGTATCAGGATCATCCA+AGG | 0.628215 | 3.3:-40500146 | None:intergenic |
GCCAAGTATCCAGCCATACG+AGG | 0.629802 | 3.3:-40500109 | None:intergenic |
ATATAGAGGATACCCAATTG+AGG | 0.629948 | 3.3:+40495962 | MS.gene22026:CDS |
GAGCAGTGTTTAAATATCCA+GGG | 0.630707 | 3.3:-40495890 | None:intergenic |
CTGTATGGACCTCTTCATGG+TGG | 0.636415 | 3.3:+40499085 | MS.gene22026:CDS |
TATCGAATGCCTCAAAGAGG+CGG | 0.642616 | 3.3:+40500533 | MS.gene22026:CDS |
CCCAGTACGTTCATCAACAA+CGG | 0.645173 | 3.3:-40495309 | None:intergenic |
TAGGAAGCAGGTGAGCAGTG+AGG | 0.653175 | 3.3:-40495193 | None:intergenic |
CAACACTCAGCTTTACCACA+GGG | 0.656304 | 3.3:+40496717 | MS.gene22026:CDS |
CCAAGTATCCAGCCATACGA+GGG | 0.661687 | 3.3:-40500108 | None:intergenic |
TTGCTTTGCAGATATCAACT+GGG | 0.666648 | 3.3:+40495838 | MS.gene22026:intron |
AGATCCCAGAAGAAGCGGAG+AGG | 0.669679 | 3.3:-40495256 | None:intergenic |
TGAGAGACAAACAAATAGTG+CGG | 0.671447 | 3.3:+40498149 | MS.gene22026:CDS |
TCTAGGAAACGAAAGCTCAG+TGG | 0.672377 | 3.3:+40499451 | MS.gene22026:intron |
CTGTATCGAATGCCTCAAAG+AGG | 0.675445 | 3.3:+40500530 | MS.gene22026:CDS |
ATCAACTGGGAAGAATGACA+AGG | 0.680165 | 3.3:+40495851 | MS.gene22026:CDS |
AGATCTACCTTGATGCAAGG+TGG | 0.694022 | 3.3:-40498862 | None:intergenic |
TCAACTGGGAAGAATGACAA+GGG | 0.700148 | 3.3:+40495852 | MS.gene22026:CDS |
TCCAGTGCACGAGTTAGACG+AGG | 0.700211 | 3.3:-40498782 | None:intergenic |
GTTCCTTTGACATTGGACGG+TGG | 0.730649 | 3.3:-40495281 | None:intergenic |
AAGCTCACCAAAACACCCTG+TGG | 0.734798 | 3.3:-40496732 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAAAAAAATGTAAC+AGG | - | chr3.3:40499616-40499635 | None:intergenic | 10.0% |
!! | AAATAAAATAGTGAAAAATT+CGG | - | chr3.3:40500083-40500102 | None:intergenic | 10.0% |
!! | AAATATAAAAGCTAATAATA+AGG | - | chr3.3:40498574-40498593 | None:intergenic | 10.0% |
!! | ATTCTATTACTTAAAATAAA+AGG | + | chr3.3:40497785-40497804 | MS.gene22026:intron | 10.0% |
!! | TTATATGAAAAGTTAAAAAA+AGG | - | chr3.3:40498091-40498110 | None:intergenic | 10.0% |
!! | TTCTATTACTTAAAATAAAA+GGG | + | chr3.3:40497786-40497805 | MS.gene22026:intron | 10.0% |
!!! | AATTATGATTAAACATTTTT+TGG | + | chr3.3:40496496-40496515 | MS.gene22026:intron | 10.0% |
!!! | ATTATGATTAAACATTTTTT+GGG | + | chr3.3:40496497-40496516 | MS.gene22026:intron | 10.0% |
!!! | GTTACATTTTTTTTTTTTTT+TGG | + | chr3.3:40499616-40499635 | MS.gene22026:intron | 10.0% |
!!! | TATTAGCTTTTATATTTATA+GGG | + | chr3.3:40498577-40498596 | MS.gene22026:intron | 10.0% |
!!! | TATTTTTATGATGAAATATT+AGG | + | chr3.3:40495584-40495603 | MS.gene22026:intron | 10.0% |
!!! | TTATTAGCTTTTATATTTAT+AGG | + | chr3.3:40498576-40498595 | MS.gene22026:intron | 10.0% |
!!! | TTTTCATATAATTTAATTCA+GGG | + | chr3.3:40498100-40498119 | MS.gene22026:intron | 10.0% |
!! | AATAAAATAGTGAAAAATTC+GGG | - | chr3.3:40500082-40500101 | None:intergenic | 15.0% |
!! | ACGATATATAATTTAAAGAA+AGG | - | chr3.3:40500197-40500216 | None:intergenic | 15.0% |
!! | ATTTGAAAAGTTAATGTATA+TGG | + | chr3.3:40496931-40496950 | MS.gene22026:intron | 15.0% |
!! | GAATGAAATATAAGTAAAAA+TGG | - | chr3.3:40496988-40497007 | None:intergenic | 15.0% |
!! | TGATTTAATTCAACAATTAA+AGG | + | chr3.3:40498605-40498624 | MS.gene22026:intron | 15.0% |
!!! | CTTTTCATATAATTTAATTC+AGG | + | chr3.3:40498099-40498118 | MS.gene22026:intron | 15.0% |
!!! | GATTTTTTATTTGATCAATT+GGG | + | chr3.3:40495487-40495506 | MS.gene22026:intron | 15.0% |
!!! | TAATTGATTTTCTTTCAATT+TGG | + | chr3.3:40495407-40495426 | MS.gene22026:intron | 15.0% |
!!! | TGATTTTTTATTTGATCAAT+TGG | + | chr3.3:40495486-40495505 | MS.gene22026:intron | 15.0% |
!!! | TTTTTACTTATATTTCATTC+TGG | + | chr3.3:40496988-40497007 | MS.gene22026:intron | 15.0% |
!! | AATACTAGCATAATCATTAT+TGG | + | chr3.3:40500240-40500259 | MS.gene22026:intron | 20.0% |
!! | AATTATGAAGCCTATAAATT+AGG | - | chr3.3:40497018-40497037 | None:intergenic | 20.0% |
!! | CAATCTAATTCAAATATTCT+CGG | - | chr3.3:40500014-40500033 | None:intergenic | 20.0% |
!! | TCAACAATTTCTTATATTGA+TGG | + | chr3.3:40495921-40495940 | MS.gene22026:CDS | 20.0% |
!! | TGACATAAAAATGTTTATCT+TGG | - | chr3.3:40497708-40497727 | None:intergenic | 20.0% |
!! | TGTATAATGATAACATAATG+TGG | + | chr3.3:40497531-40497550 | MS.gene22026:intron | 20.0% |
!! | TTTATGATGAAATATTAGGT+GGG | + | chr3.3:40495588-40495607 | MS.gene22026:intron | 20.0% |
!!! | ACTTTGTTATTTCATTTAAC+TGG | + | chr3.3:40496778-40496797 | MS.gene22026:intron | 20.0% |
!!! | ATCTAAGATACTCTAAATTT+TGG | + | chr3.3:40497952-40497971 | MS.gene22026:intron | 20.0% |
!!! | CAATTTTCAAAGAAAAGTAA+AGG | + | chr3.3:40498972-40498991 | MS.gene22026:intron | 20.0% |
!!! | GAAGAACTTTATTTTTTGTT+AGG | + | chr3.3:40498019-40498038 | MS.gene22026:intron | 20.0% |
!!! | GATAATCAAATAATTTTAGC+TGG | + | chr3.3:40496206-40496225 | MS.gene22026:intron | 20.0% |
!!! | TTTTATGATGAAATATTAGG+TGG | + | chr3.3:40495587-40495606 | MS.gene22026:intron | 20.0% |
!!! | TTTTTGCTTAAATTTCATTC+AGG | - | chr3.3:40496907-40496926 | None:intergenic | 20.0% |
!!! | TTTTTTGGGATCAAATTTTA+TGG | + | chr3.3:40496511-40496530 | MS.gene22026:intron | 20.0% |
! | AAAGGTCTTGAAAAAATTGA+CGG | + | chr3.3:40499513-40499532 | MS.gene22026:CDS | 25.0% |
! | AACAATTAAAGGATCATGAT+AGG | + | chr3.3:40498616-40498635 | MS.gene22026:intron | 25.0% |
! | AATCTATTCAAATGTTACAC+CGG | + | chr3.3:40495761-40495780 | MS.gene22026:intron | 25.0% |
! | AATGAAAATTTCCGATTGAT+TGG | + | chr3.3:40499356-40499375 | MS.gene22026:intron | 25.0% |
! | AATGTAGAAATTGGAAAAAC+AGG | - | chr3.3:40497623-40497642 | None:intergenic | 25.0% |
! | ACAATTAAAGGATCATGATA+GGG | + | chr3.3:40498617-40498636 | MS.gene22026:intron | 25.0% |
! | AGATGCTACAAATTAAATAC+AGG | - | chr3.3:40500284-40500303 | None:intergenic | 25.0% |
! | ATAATTACACTTGAGAGATT+AGG | - | chr3.3:40496468-40496487 | None:intergenic | 25.0% |
! | ATCACACTTAATGTTAGTAA+TGG | + | chr3.3:40500378-40500397 | MS.gene22026:intron | 25.0% |
! | CATTGTCAAAATGTAGAAAT+TGG | - | chr3.3:40497632-40497651 | None:intergenic | 25.0% |
! | GCTATATTATAGCAACTATT+TGG | - | chr3.3:40497232-40497251 | None:intergenic | 25.0% |
! | GTCAATCAAATGATATAACA+TGG | - | chr3.3:40498058-40498077 | None:intergenic | 25.0% |
! | TAAAAGCTAATAATAAGGAG+AGG | - | chr3.3:40498569-40498588 | None:intergenic | 25.0% |
! | TACTTAAAATAAAAGGGACT+TGG | + | chr3.3:40497792-40497811 | MS.gene22026:intron | 25.0% |
! | TACTTATATTTCATTCTGGA+GGG | + | chr3.3:40496992-40497011 | MS.gene22026:intron | 25.0% |
! | TCACACTTAATGTTAGTAAT+GGG | + | chr3.3:40500379-40500398 | MS.gene22026:intron | 25.0% |
! | TCTACTCTGGATTAATATAT+AGG | + | chr3.3:40499933-40499952 | MS.gene22026:CDS | 25.0% |
! | TGATTCTTAACTTTATTCTG+TGG | + | chr3.3:40497586-40497605 | MS.gene22026:intron | 25.0% |
! | TTACTTATATTTCATTCTGG+AGG | + | chr3.3:40496991-40497010 | MS.gene22026:intron | 25.0% |
! | TTGAATTAGATTGATCTGAT+GGG | + | chr3.3:40500021-40500040 | MS.gene22026:intron | 25.0% |
! | TTGTTAAAGCAACATATAAC+AGG | - | chr3.3:40499000-40499019 | None:intergenic | 25.0% |
! | TTTACAAAAATTGTAGCATC+TGG | + | chr3.3:40500307-40500326 | MS.gene22026:intron | 25.0% |
! | TTTACTTCTGTTTATTCTCT+AGG | + | chr3.3:40499434-40499453 | MS.gene22026:intron | 25.0% |
! | TTTGAATTAGATTGATCTGA+TGG | + | chr3.3:40500020-40500039 | MS.gene22026:intron | 25.0% |
! | TTTGTAGTAAATAGCGTATT+CGG | - | chr3.3:40497203-40497222 | None:intergenic | 25.0% |
!! | AATCGGAAATTTTCATTGTT+AGG | - | chr3.3:40499353-40499372 | None:intergenic | 25.0% |
!! | ACTAATCTATTTTATGTTCC+AGG | + | chr3.3:40500417-40500436 | MS.gene22026:intron | 25.0% |
!! | ATCGGAAATTTTCATTGTTA+GGG | - | chr3.3:40499352-40499371 | None:intergenic | 25.0% |
!! | TATTACCTTTTACTTCTTCT+GGG | + | chr3.3:40499315-40499334 | MS.gene22026:intron | 25.0% |
!!! | ATTTTAGTGTTGTCAAATAG+CGG | + | chr3.3:40497129-40497148 | MS.gene22026:intron | 25.0% |
!!! | TAATTTAAAGGAGAGTGTTT+AGG | + | chr3.3:40497075-40497094 | MS.gene22026:intron | 25.0% |
!!! | TGTTTATTTTGACTTATGTC+TGG | + | chr3.3:40497670-40497689 | MS.gene22026:intron | 25.0% |
!!! | TGTTTATTTTGACTTTTGTC+TGG | + | chr3.3:40497739-40497758 | MS.gene22026:intron | 25.0% |
!!! | TTGCATAACATTTGTTTTGT+AGG | + | chr3.3:40497336-40497355 | MS.gene22026:intron | 25.0% |
AAAATAGTGAAAAATTCGGG+TGG | - | chr3.3:40500079-40500098 | None:intergenic | 30.0% | |
AAACCTATCTTGAGAAAATG+AGG | - | chr3.3:40496880-40496899 | None:intergenic | 30.0% | |
AAACTGTATATCAAACTGAG+TGG | - | chr3.3:40499798-40499817 | None:intergenic | 30.0% | |
AATAAAAAGACTCATGCTAG+TGG | + | chr3.3:40495684-40495703 | MS.gene22026:intron | 30.0% | |
AATATAGCTCCAATTGATAG+TGG | + | chr3.3:40497244-40497263 | MS.gene22026:intron | 30.0% | |
AATCACCTTCTTGAAATCAT+TGG | - | chr3.3:40495378-40495397 | None:intergenic | 30.0% | |
AATGCAACCTTCAATTATAC+AGG | + | chr3.3:40499214-40499233 | MS.gene22026:intron | 30.0% | |
ACTGGTGTATTTATCTAACT+TGG | + | chr3.3:40497310-40497329 | MS.gene22026:intron | 30.0% | |
AGATTAGGCCTTAAAATTCA+AGG | - | chr3.3:40496453-40496472 | None:intergenic | 30.0% | |
AGCAATCATTTCCAATCAAT+CGG | - | chr3.3:40499370-40499389 | None:intergenic | 30.0% | |
AGTTACATACGTAACATATG+AGG | - | chr3.3:40496155-40496174 | None:intergenic | 30.0% | |
AGTTCTTCTCATGATATTAG+AGG | - | chr3.3:40498007-40498026 | None:intergenic | 30.0% | |
ATCTAACAAGCTTTCTTACA+CGG | + | chr3.3:40498363-40498382 | MS.gene22026:CDS | 30.0% | |
ATGCCATTATTTGATTATGC+AGG | + | chr3.3:40499835-40499854 | MS.gene22026:intron | 30.0% | |
CAACCTGCATAATCAAATAA+TGG | - | chr3.3:40499841-40499860 | None:intergenic | 30.0% | |
CAATTTCCATCACAAAAGTA+AGG | - | chr3.3:40497568-40497587 | None:intergenic | 30.0% | |
CATAGACAGGAAATACAAAA+TGG | - | chr3.3:40499588-40499607 | None:intergenic | 30.0% | |
CCTGTGTCATGATAATTTAA+AGG | + | chr3.3:40497063-40497082 | MS.gene22026:intron | 30.0% | |
CCTTTAAATTATCATGACAC+AGG | - | chr3.3:40497066-40497085 | None:intergenic | 30.0% | |
GAGAAGAAATCAAATTACAC+CGG | - | chr3.3:40495783-40495802 | None:intergenic | 30.0% | |
GATAATTGTTGTGTTAACAG+TGG | + | chr3.3:40496807-40496826 | MS.gene22026:intron | 30.0% | |
GATCCACATATCATAAACAA+AGG | - | chr3.3:40496561-40496580 | None:intergenic | 30.0% | |
GTTCAAATTCCACTATCAAT+TGG | - | chr3.3:40497256-40497275 | None:intergenic | 30.0% | |
TAAGCATGTAGTATTCAAGA+TGG | + | chr3.3:40496322-40496341 | MS.gene22026:intron | 30.0% | |
TAGATTTACACCAGTATATC+CGG | - | chr3.3:40495747-40495766 | None:intergenic | 30.0% | |
TGAATTAGATTGATCTGATG+GGG | + | chr3.3:40500022-40500041 | MS.gene22026:intron | 30.0% | |
TGAGAGGAATAATCCTAAAT+AGG | - | chr3.3:40498650-40498669 | None:intergenic | 30.0% | |
TTATGTTCCAGGTATATGTT+GGG | + | chr3.3:40500428-40500447 | MS.gene22026:intron | 30.0% | |
TTTATGTTCCAGGTATATGT+TGG | + | chr3.3:40500427-40500446 | MS.gene22026:intron | 30.0% | |
! | AAACAAATAGTGCGGATTAT+TGG | + | chr3.3:40498157-40498176 | MS.gene22026:CDS | 30.0% |
! | ACTGAGTTCCTTGAATTTTA+AGG | + | chr3.3:40496442-40496461 | MS.gene22026:intron | 30.0% |
! | ATGCATATCTTTTCAGTGTA+TGG | + | chr3.3:40496645-40496664 | MS.gene22026:intron | 30.0% |
! | GTATTACCTTTTACTTCTTC+TGG | + | chr3.3:40499314-40499333 | MS.gene22026:intron | 30.0% |
! | TATCTTGGAAAATGATTTGC+TGG | + | chr3.3:40500330-40500349 | MS.gene22026:intron | 30.0% |
!! | TCTTATATTGATGGTGATGA+GGG | + | chr3.3:40495930-40495949 | MS.gene22026:CDS | 30.0% |
!! | TGTATACCTTACTTTTGTGA+TGG | + | chr3.3:40497559-40497578 | MS.gene22026:intron | 30.0% |
!! | TTCTTATATTGATGGTGATG+AGG | + | chr3.3:40495929-40495948 | MS.gene22026:CDS | 30.0% |
AAACTATGATCCTAGAGCAA+AGG | + | chr3.3:40499495-40499514 | MS.gene22026:CDS | 35.0% | |
AAAGAAAGACCTGTATCAAG+TGG | + | chr3.3:40500478-40500497 | MS.gene22026:CDS | 35.0% | |
AAAGATTATGAGACCTCAAC+AGG | + | chr3.3:40500165-40500184 | MS.gene22026:CDS | 35.0% | |
AACATTCCAGAGTTCATTGA+GGG | + | chr3.3:40499275-40499294 | MS.gene22026:CDS | 35.0% | |
AATTGTAGCATCTGGTATCT+TGG | + | chr3.3:40500315-40500334 | MS.gene22026:intron | 35.0% | |
ACAGAGAATCAAGCATGTAA+AGG | - | chr3.3:40498396-40498415 | None:intergenic | 35.0% | |
ACTTGATACAGGTCTTTCTT+TGG | - | chr3.3:40500479-40500498 | None:intergenic | 35.0% | |
AGAAAGGAAATAACCTGTTG+AGG | - | chr3.3:40500181-40500200 | None:intergenic | 35.0% | |
AGTAAAAGGTAATACCAACC+TGG | - | chr3.3:40499309-40499328 | None:intergenic | 35.0% | |
ATAGGGTAACAGTCCTATTT+AGG | + | chr3.3:40498634-40498653 | MS.gene22026:intron | 35.0% | |
ATATAGAGGATACCCAATTG+AGG | + | chr3.3:40495962-40495981 | MS.gene22026:CDS | 35.0% | |
ATGTTACATACTCCTTAAGC+TGG | + | chr3.3:40499662-40499681 | MS.gene22026:intron | 35.0% | |
CAAAGCCAATGATTTCAAGA+AGG | + | chr3.3:40495370-40495389 | MS.gene22026:CDS | 35.0% | |
CACTGCAAAAAAATGCATAG+TGG | - | chr3.3:40498739-40498758 | None:intergenic | 35.0% | |
CATATGAGATATGACACTTC+CGG | - | chr3.3:40496011-40496030 | None:intergenic | 35.0% | |
CGAATCACTAAACAATGTTG+AGG | + | chr3.3:40496246-40496265 | MS.gene22026:intron | 35.0% | |
GAACTTTGTATAGTGATTGC+GGG | - | chr3.3:40497044-40497063 | None:intergenic | 35.0% | |
GAATTAGATTGATCTGATGG+GGG | + | chr3.3:40500023-40500042 | MS.gene22026:intron | 35.0% | |
GAGCAGTGTTTAAATATCCA+GGG | - | chr3.3:40495893-40495912 | None:intergenic | 35.0% | |
GCTGCGATTAATCTTAGATT+GGG | + | chr3.3:40498319-40498338 | MS.gene22026:CDS | 35.0% | |
GGAACTTTGTATAGTGATTG+CGG | - | chr3.3:40497045-40497064 | None:intergenic | 35.0% | |
GGAGCTAATGAGGTAATAAA+TGG | + | chr3.3:40499106-40499125 | MS.gene22026:intron | 35.0% | |
GGTCTCATAATCTTTGTATC+AGG | - | chr3.3:40500160-40500179 | None:intergenic | 35.0% | |
GGTGTATTTATCTAACTTGG+TGG | + | chr3.3:40497313-40497332 | MS.gene22026:intron | 35.0% | |
GTAGAAATTGGAAAAACAGG+AGG | - | chr3.3:40497620-40497639 | None:intergenic | 35.0% | |
GTGCATGAAACCTTTATACA+GGG | + | chr3.3:40496059-40496078 | MS.gene22026:intron | 35.0% | |
TAACATTCCAGAGTTCATTG+AGG | + | chr3.3:40499274-40499293 | MS.gene22026:CDS | 35.0% | |
TAAGAAATTGTTGATCGCAC+AGG | - | chr3.3:40495915-40495934 | None:intergenic | 35.0% | |
TATCTGCACAGAAATTCAGA+AGG | - | chr3.3:40498287-40498306 | None:intergenic | 35.0% | |
TATGTTCCAGGTATATGTTG+GGG | + | chr3.3:40500429-40500448 | MS.gene22026:intron | 35.0% | |
TCCAAGTCAGTTACAAGAAT+GGG | + | chr3.3:40496680-40496699 | MS.gene22026:CDS | 35.0% | |
TGAGAGACAAACAAATAGTG+CGG | + | chr3.3:40498149-40498168 | MS.gene22026:CDS | 35.0% | |
TGCTGCGATTAATCTTAGAT+TGG | + | chr3.3:40498318-40498337 | MS.gene22026:CDS | 35.0% | |
TGTGCATGAAACCTTTATAC+AGG | + | chr3.3:40496058-40496077 | MS.gene22026:intron | 35.0% | |
TTAATCTTAGATTGGGAGGA+AGG | + | chr3.3:40498326-40498345 | MS.gene22026:CDS | 35.0% | |
TTGCTTTGCAGATATCAACT+GGG | + | chr3.3:40495838-40495857 | MS.gene22026:intron | 35.0% | |
TTGGGTATCCTCTATATCTA+AGG | - | chr3.3:40495959-40495978 | None:intergenic | 35.0% | |
TTTGCATCTCAGTTAGTCAA+TGG | - | chr3.3:40496598-40496617 | None:intergenic | 35.0% | |
TTTGCTTTGCAGATATCAAC+TGG | + | chr3.3:40495837-40495856 | MS.gene22026:intron | 35.0% | |
! | AAAAGGGACTTGGTTAAGAA+AGG | + | chr3.3:40497802-40497821 | MS.gene22026:intron | 35.0% |
! | AAACCTTTCTTAGTCTTCCT+CGG | + | chr3.3:40498915-40498934 | MS.gene22026:intron | 35.0% |
! | AAGTTTCTCATCTTTTGAGC+TGG | + | chr3.3:40497491-40497510 | MS.gene22026:intron | 35.0% |
! | AATAGTGCGGATTATTGGAA+AGG | + | chr3.3:40498162-40498181 | MS.gene22026:CDS | 35.0% |
! | ATGCCTCATTTTCTCAAGAT+AGG | + | chr3.3:40496874-40496893 | MS.gene22026:intron | 35.0% |
! | CTGATGAGTATTTTGTCAAG+AGG | + | chr3.3:40499888-40499907 | MS.gene22026:CDS | 35.0% |
! | TCAAATTTTATGGCCTGACA+TGG | + | chr3.3:40496521-40496540 | MS.gene22026:intron | 35.0% |
! | TGGCCTTTGTTTATGATATG+TGG | + | chr3.3:40496555-40496574 | MS.gene22026:intron | 35.0% |
! | TTTCTTTGGTTGGTGCATAA+TGG | - | chr3.3:40500465-40500484 | None:intergenic | 35.0% |
!! | ATAGTACTGATCACTGATCA+GGG | - | chr3.3:40499706-40499725 | None:intergenic | 35.0% |
!! | CTTATATTGATGGTGATGAG+GGG | + | chr3.3:40495931-40495950 | MS.gene22026:CDS | 35.0% |
!! | CTTGAAATCATTGGCTTTGA+CGG | - | chr3.3:40495369-40495388 | None:intergenic | 35.0% |
!! | GTGTAAGAAAGCTTGTTAGA+TGG | - | chr3.3:40498364-40498383 | None:intergenic | 35.0% |
!! | TTGCTGGCTGTATCATTTTA+AGG | + | chr3.3:40500346-40500365 | MS.gene22026:intron | 35.0% |
!! | TTTATTTGCTATCCCTCGTA+TGG | + | chr3.3:40500096-40500115 | MS.gene22026:CDS | 35.0% |
!!! | CACTATGCATTTTTTTGCAG+TGG | + | chr3.3:40498737-40498756 | MS.gene22026:intron | 35.0% |
!!! | CATTTTTTTGCAGTGGCAAT+CGG | + | chr3.3:40498744-40498763 | MS.gene22026:intron | 35.0% |
!!! | TTTTTCAAGACCTTTGCTCT+AGG | - | chr3.3:40499508-40499527 | None:intergenic | 35.0% |
AAAAGACTCATGCTAGTGGA+CGG | + | chr3.3:40495688-40495707 | MS.gene22026:intron | 40.0% | |
AAACAAAGGCCATAACAGCA+GGG | - | chr3.3:40496547-40496566 | None:intergenic | 40.0% | |
AAATACAGGTGTATCACCAC+AGG | - | chr3.3:40500270-40500289 | None:intergenic | 40.0% | |
ACATATGTGCGACGTCTAAT+CGG | - | chr3.3:40496384-40496403 | None:intergenic | 40.0% | |
ACCACTGCAAAGTGCAAATA+AGG | - | chr3.3:40499026-40499045 | None:intergenic | 40.0% | |
AGGACAGCCTGTATAATTGA+AGG | - | chr3.3:40499224-40499243 | None:intergenic | 40.0% | |
ATCAACTGGGAAGAATGACA+AGG | + | chr3.3:40495851-40495870 | MS.gene22026:CDS | 40.0% | |
CAATTTCACTCAGCATCTTG+AGG | - | chr3.3:40499244-40499263 | None:intergenic | 40.0% | |
CCAATGACCAATTAATCAGG+GGG | - | chr3.3:40495723-40495742 | None:intergenic | 40.0% | |
CCACTGCAAAGTGCAAATAA+GGG | - | chr3.3:40499025-40499044 | None:intergenic | 40.0% | |
CCAGAGTAGAAGTCAACATT+TGG | - | chr3.3:40499923-40499942 | None:intergenic | 40.0% | |
CCCAATGACCAATTAATCAG+GGG | - | chr3.3:40495724-40495743 | None:intergenic | 40.0% | |
CCCCTGATTAATTGGTCATT+GGG | + | chr3.3:40495721-40495740 | MS.gene22026:intron | 40.0% | |
CTATACACGACCCTGTATAA+AGG | - | chr3.3:40496072-40496091 | None:intergenic | 40.0% | |
CTCAAGATGCTGAGTGAAAT+TGG | + | chr3.3:40499242-40499261 | MS.gene22026:CDS | 40.0% | |
CTCCAAGTCAGTTACAAGAA+TGG | + | chr3.3:40496679-40496698 | MS.gene22026:CDS | 40.0% | |
CTTTGTATCAGGATCATCCA+AGG | - | chr3.3:40500149-40500168 | None:intergenic | 40.0% | |
GAAATTGGAAAAACAGGAGG+AGG | - | chr3.3:40497617-40497636 | None:intergenic | 40.0% | |
GATACAGGTCTTTCTTTGGT+TGG | - | chr3.3:40500475-40500494 | None:intergenic | 40.0% | |
GATGTATACACTGCTATTGC+TGG | + | chr3.3:40499049-40499068 | MS.gene22026:CDS | 40.0% | |
GCATTAACAAGTACACCCAT+AGG | - | chr3.3:40497394-40497413 | None:intergenic | 40.0% | |
GCCCAATGACCAATTAATCA+GGG | - | chr3.3:40495725-40495744 | None:intergenic | 40.0% | |
GCGATTAATCTTAGATTGGG+AGG | + | chr3.3:40498322-40498341 | MS.gene22026:CDS | 40.0% | |
GGAGCAGTGTTTAAATATCC+AGG | - | chr3.3:40495894-40495913 | None:intergenic | 40.0% | |
GGGGTTTGTATACGATTTCA+GGG | + | chr3.3:40500042-40500061 | MS.gene22026:intron | 40.0% | |
GGTCTTGAAAAAATTGACGG+AGG | + | chr3.3:40499516-40499535 | MS.gene22026:CDS | 40.0% | |
GTAACAGGCATATCATAGAC+AGG | - | chr3.3:40499601-40499620 | None:intergenic | 40.0% | |
GTATACGATTTCAGGGCTAT+GGG | + | chr3.3:40500049-40500068 | MS.gene22026:intron | 40.0% | |
TAAACAAAGGCCATAACAGC+AGG | - | chr3.3:40496548-40496567 | None:intergenic | 40.0% | |
TCAACTGGGAAGAATGACAA+GGG | + | chr3.3:40495852-40495871 | MS.gene22026:CDS | 40.0% | |
TCCCATTCTTGTAACTGACT+TGG | - | chr3.3:40496684-40496703 | None:intergenic | 40.0% | |
TGATTAATTGGTCATTGGGC+CGG | + | chr3.3:40495725-40495744 | MS.gene22026:intron | 40.0% | |
TGATTCTCTGTACGTCTTCT+CGG | + | chr3.3:40498405-40498424 | MS.gene22026:intron | 40.0% | |
TGGATAAACACCTCTATCAG+AGG | - | chr3.3:40499568-40499587 | None:intergenic | 40.0% | |
TGTATACGATTTCAGGGCTA+TGG | + | chr3.3:40500048-40500067 | MS.gene22026:intron | 40.0% | |
TTAACACCCTCAATGAACTC+TGG | - | chr3.3:40499284-40499303 | None:intergenic | 40.0% | |
TTGTTAGATGGAAGAACAGG+TGG | - | chr3.3:40498352-40498371 | None:intergenic | 40.0% | |
! | AAACGAAAGCTCAGTGGTTT+TGG | + | chr3.3:40499457-40499476 | MS.gene22026:CDS | 40.0% |
! | AAGTGTTTTCCATTGTTGGC+CGG | + | chr3.3:40499539-40499558 | MS.gene22026:CDS | 40.0% |
! | AGTATTGAAGTCTCTCCTGA+TGG | + | chr3.3:40495341-40495360 | MS.gene22026:CDS | 40.0% |
! | CGATCTGTGATTGATAACAC+TGG | + | chr3.3:40497292-40497311 | MS.gene22026:intron | 40.0% |
! | TTCTGGAGGGCCTAATTTAT+AGG | + | chr3.3:40497005-40497024 | MS.gene22026:intron | 40.0% |
!! | AGCTTGTTAGATGGAAGAAC+AGG | - | chr3.3:40498355-40498374 | None:intergenic | 40.0% |
!! | CATAGTACTGATCACTGATC+AGG | - | chr3.3:40499707-40499726 | None:intergenic | 40.0% |
!! | CCAAATGTTGACTTCTACTC+TGG | + | chr3.3:40499920-40499939 | MS.gene22026:CDS | 40.0% |
!! | GTGTTACTTCCACTTGATAC+AGG | - | chr3.3:40500490-40500509 | None:intergenic | 40.0% |
!! | TAGTACTGATCACTGATCAG+GGG | - | chr3.3:40499705-40499724 | None:intergenic | 40.0% |
!! | TCTTGTAACTGACTTGGAGA+AGG | - | chr3.3:40496678-40496697 | None:intergenic | 40.0% |
!!! | GAGGAAGTGTTTTCCATTGT+TGG | + | chr3.3:40499535-40499554 | MS.gene22026:CDS | 40.0% |
AATCATTATTGGCCGACCTG+TGG | + | chr3.3:40500251-40500270 | MS.gene22026:intron | 45.0% | |
AGACAGAGCAATCTTCTCCA+AGG | - | chr3.3:40499870-40499889 | None:intergenic | 45.0% | |
AGATAGCTGACCAAGCTTGT+CGG | - | chr3.3:40500512-40500531 | None:intergenic | 45.0% | |
AGATCTACCTTGATGCAAGG+TGG | - | chr3.3:40498865-40498884 | None:intergenic | 45.0% | |
AGCGTTCCTTTGACATTGGA+CGG | - | chr3.3:40495287-40495306 | None:intergenic | 45.0% | |
AGGATACCCAATTGAGGAGT+TGG | + | chr3.3:40495968-40495987 | MS.gene22026:CDS | 45.0% | |
CAACACTCAGCTTTACCACA+GGG | + | chr3.3:40496717-40496736 | MS.gene22026:CDS | 45.0% | |
CACGACCCAGAAGAAGTAAA+AGG | - | chr3.3:40499323-40499342 | None:intergenic | 45.0% | |
CCCAGTACGTTCATCAACAA+CGG | - | chr3.3:40495312-40495331 | None:intergenic | 45.0% | |
CCCCCTGATTAATTGGTCAT+TGG | + | chr3.3:40495720-40495739 | MS.gene22026:intron | 45.0% | |
CCTCAAGATGCACATCCTAT+GGG | + | chr3.3:40497376-40497395 | MS.gene22026:CDS | 45.0% | |
CGAGCAGTATATCCAGCTTA+AGG | - | chr3.3:40499677-40499696 | None:intergenic | 45.0% | |
CTCTATCTCACTCTCATGAG+AGG | - | chr3.3:40498666-40498685 | None:intergenic | 45.0% | |
CTGTATCGAATGCCTCAAAG+AGG | + | chr3.3:40500530-40500549 | MS.gene22026:CDS | 45.0% | |
GAGAGATCTACCTTGATGCA+AGG | - | chr3.3:40498868-40498887 | None:intergenic | 45.0% | |
GAGATATGACACTTCCGGAA+AGG | - | chr3.3:40496006-40496025 | None:intergenic | 45.0% | |
GAGGGGATCCTTAGATATAG+AGG | + | chr3.3:40495948-40495967 | MS.gene22026:CDS | 45.0% | |
GCATCTCAGTTAGTCAATGG+TGG | - | chr3.3:40496595-40496614 | None:intergenic | 45.0% | |
GGACTCAAACTTTATGACCC+TGG | + | chr3.3:40495873-40495892 | MS.gene22026:CDS | 45.0% | |
GGCCCAATGACCAATTAATC+AGG | - | chr3.3:40495726-40495745 | None:intergenic | 45.0% | |
GGGGGTTTGTATACGATTTC+AGG | + | chr3.3:40500041-40500060 | MS.gene22026:intron | 45.0% | |
GTATACACTGCTATTGCTGG+TGG | + | chr3.3:40499052-40499071 | MS.gene22026:CDS | 45.0% | |
TATCGAATGCCTCAAAGAGG+CGG | + | chr3.3:40500533-40500552 | MS.gene22026:CDS | 45.0% | |
TCAACACTCAGCTTTACCAC+AGG | + | chr3.3:40496716-40496735 | MS.gene22026:CDS | 45.0% | |
TCATTAGCTCCACCATGAAG+AGG | - | chr3.3:40499097-40499116 | None:intergenic | 45.0% | |
TCCAGGTATATGTTGGGGAA+TGG | + | chr3.3:40500434-40500453 | MS.gene22026:intron | 45.0% | |
TCTAGGAAACGAAAGCTCAG+TGG | + | chr3.3:40499451-40499470 | MS.gene22026:intron | 45.0% | |
TCTCAGCCAACTCCTCAATT+GGG | - | chr3.3:40495977-40495996 | None:intergenic | 45.0% | |
TTCTCAGCCAACTCCTCAAT+TGG | - | chr3.3:40495978-40495997 | None:intergenic | 45.0% | |
! | ACCGTTGTTGATGAACGTAC+TGG | + | chr3.3:40495308-40495327 | MS.gene22026:CDS | 45.0% |
! | AGTGTTTTCCATTGTTGGCC+GGG | + | chr3.3:40499540-40499559 | MS.gene22026:CDS | 45.0% |
! | CCCTTATTTGCACTTTGCAG+TGG | + | chr3.3:40499022-40499041 | MS.gene22026:intron | 45.0% |
! | CCGTTGTTGATGAACGTACT+GGG | + | chr3.3:40495309-40495328 | MS.gene22026:CDS | 45.0% |
! | GAGTTACTTACTCTGAGAGC+AGG | - | chr3.3:40497454-40497473 | None:intergenic | 45.0% |
! | TCTTCATGGTGGAGCTAATG+AGG | + | chr3.3:40499096-40499115 | MS.gene22026:CDS | 45.0% |
!! | AGCTTTACCACAGGGTGTTT+TGG | + | chr3.3:40496725-40496744 | MS.gene22026:CDS | 45.0% |
!! | TCATTGAGGGTGTTAAAGCC+AGG | + | chr3.3:40499288-40499307 | MS.gene22026:CDS | 45.0% |
AAGCTCACCAAAACACCCTG+TGG | - | chr3.3:40496735-40496754 | None:intergenic | 50.0% | |
ACACCTCTATCAGAGGATCC+CGG | - | chr3.3:40499561-40499580 | None:intergenic | 50.0% | |
ACAGGTGTATCACCACAGGT+CGG | - | chr3.3:40500266-40500285 | None:intergenic | 50.0% | |
ACTGCTATTGCTGGTGGAGT+AGG | + | chr3.3:40499058-40499077 | MS.gene22026:CDS | 50.0% | |
AGCTGGATATACTGCTCGTG+AGG | + | chr3.3:40499679-40499698 | MS.gene22026:intron | 50.0% | |
CAGCCGAGGAAGACTAAGAA+AGG | - | chr3.3:40498921-40498940 | None:intergenic | 50.0% | |
CCAAGTATCCAGCCATACGA+GGG | - | chr3.3:40500111-40500130 | None:intergenic | 50.0% | |
CCCATAGGATGTGCATCTTG+AGG | - | chr3.3:40497379-40497398 | None:intergenic | 50.0% | |
CTGAGAGCAGGATTTGCATC+AGG | - | chr3.3:40497442-40497461 | None:intergenic | 50.0% | |
CTGGATACTTGGCACATTGG+CGG | + | chr3.3:40500119-40500138 | MS.gene22026:CDS | 50.0% | |
CTGTATGGACCTCTTCATGG+TGG | + | chr3.3:40499085-40499104 | MS.gene22026:CDS | 50.0% | |
GAGCAGTGAGGGTGGATAAA+CGG | - | chr3.3:40495184-40495203 | None:intergenic | 50.0% | |
GCACGAGTTAGACGAGGATT+GGG | - | chr3.3:40498779-40498798 | None:intergenic | 50.0% | |
GCCATTCCCCAACATATACC+TGG | - | chr3.3:40500438-40500457 | None:intergenic | 50.0% | |
GCCTCAAGATGCACATCCTA+TGG | + | chr3.3:40497375-40497394 | MS.gene22026:CDS | 50.0% | |
GCTCTGTATGGACCTCTTCA+TGG | + | chr3.3:40499082-40499101 | MS.gene22026:CDS | 50.0% | |
GGAAGTAACACCGACAAGCT+TGG | + | chr3.3:40500499-40500518 | MS.gene22026:CDS | 50.0% | |
GGTGAGCGTTCCTTTGACAT+TGG | - | chr3.3:40495291-40495310 | None:intergenic | 50.0% | |
GTTCCTTTGACATTGGACGG+TGG | - | chr3.3:40495284-40495303 | None:intergenic | 50.0% | |
TCAGATCAAACCGTGTCTGC+TGG | - | chr3.3:40498948-40498967 | None:intergenic | 50.0% | |
TCTCCACCGTCCAATGTCAA+AGG | + | chr3.3:40495278-40495297 | MS.gene22026:CDS | 50.0% | |
TGCACGAGTTAGACGAGGAT+TGG | - | chr3.3:40498780-40498799 | None:intergenic | 50.0% | |
TGGAGAGATCCCAGAAGAAG+CGG | - | chr3.3:40495264-40495283 | None:intergenic | 50.0% | |
TGGATACTTGGCACATTGGC+GGG | + | chr3.3:40500120-40500139 | MS.gene22026:CDS | 50.0% | |
TGGCTGGATACTTGGCACAT+TGG | + | chr3.3:40500116-40500135 | MS.gene22026:CDS | 50.0% | |
! | TATGCAGGTTGCTGTTGCCT+TGG | + | chr3.3:40499850-40499869 | MS.gene22026:intron | 50.0% |
! | TTTGCTATCCCTCGTATGGC+TGG | + | chr3.3:40500100-40500119 | MS.gene22026:CDS | 50.0% |
!! | GGATTGGCCCCCTGATTAAT+TGG | + | chr3.3:40495713-40495732 | MS.gene22026:intron | 50.0% |
!! | GGCTGAGAAAAGCACCTTTC+CGG | + | chr3.3:40495989-40496008 | MS.gene22026:CDS | 50.0% |
!! | TGAGGGTGTTAAAGCCAGGT+TGG | + | chr3.3:40499292-40499311 | MS.gene22026:intron | 50.0% |
AAGAAGCGGAGAGGTGGAGA+GGG | - | chr3.3:40495250-40495269 | None:intergenic | 55.0% | |
AGATCCCAGAAGAAGCGGAG+AGG | - | chr3.3:40495259-40495278 | None:intergenic | 55.0% | |
AGGAAGCAGGTGAGCAGTGA+GGG | - | chr3.3:40495195-40495214 | None:intergenic | 55.0% | |
CATAACAGCAGGGCCATGTC+AGG | - | chr3.3:40496537-40496556 | None:intergenic | 55.0% | |
CCCTCGTATGGCTGGATACT+TGG | + | chr3.3:40500108-40500127 | MS.gene22026:CDS | 55.0% | |
CTGACATGGCCCTGCTGTTA+TGG | + | chr3.3:40496535-40496554 | MS.gene22026:intron | 55.0% | |
CTGTACGCCACCTTGCATCA+AGG | + | chr3.3:40498855-40498874 | MS.gene22026:CDS | 55.0% | |
GCCAAGTATCCAGCCATACG+AGG | - | chr3.3:40500112-40500131 | None:intergenic | 55.0% | |
GGTCATTGGGCCGGATATAC+TGG | + | chr3.3:40495734-40495753 | MS.gene22026:intron | 55.0% | |
GGTGGAGTAGGAGCTCTGTA+TGG | + | chr3.3:40499070-40499089 | MS.gene22026:CDS | 55.0% | |
TAGGAAGCAGGTGAGCAGTG+AGG | - | chr3.3:40495196-40495215 | None:intergenic | 55.0% | |
TCCACCTCTCCGCTTCTTCT+GGG | + | chr3.3:40495252-40495271 | MS.gene22026:CDS | 55.0% | |
TCCAGTGCACGAGTTAGACG+AGG | - | chr3.3:40498785-40498804 | None:intergenic | 55.0% | |
TCCTCGTCTAACTCGTGCAC+TGG | + | chr3.3:40498781-40498800 | MS.gene22026:CDS | 55.0% | |
! | AGACTCATGCTAGTGGACGG+TGG | + | chr3.3:40495691-40495710 | MS.gene22026:intron | 55.0% |
! | ATGCTAGTGGACGGTGGGAT+TGG | + | chr3.3:40495697-40495716 | MS.gene22026:intron | 55.0% |
! | GACTCATGCTAGTGGACGGT+GGG | + | chr3.3:40495692-40495711 | MS.gene22026:intron | 55.0% |
!! | TTGGCTTTGACGGTGCCATC+AGG | - | chr3.3:40495359-40495378 | None:intergenic | 55.0% |
AAGCAGGTGAGCAGTGAGGG+TGG | - | chr3.3:40495192-40495211 | None:intergenic | 60.0% | |
CAGAGGATCCCGGCCAACAA+TGG | - | chr3.3:40499551-40499570 | None:intergenic | 60.0% | |
CGAAGATGCACGACGCTGCA+CGG | + | chr3.3:40495156-40495175 | MS.gene22026:CDS | 60.0% | |
CTCCACCTCTCCGCTTCTTC+TGG | + | chr3.3:40495251-40495270 | MS.gene22026:CDS | 60.0% | |
GAAGAAGCGGAGAGGTGGAG+AGG | - | chr3.3:40495251-40495270 | None:intergenic | 60.0% | |
TCCAGCAAGCCGCCTCTTTG+AGG | - | chr3.3:40500545-40500564 | None:intergenic | 60.0% | |
TCCCAGAAGAAGCGGAGAGG+TGG | - | chr3.3:40495256-40495275 | None:intergenic | 60.0% | |
TGGCCGGGATCCTCTGATAG+AGG | + | chr3.3:40499555-40499574 | MS.gene22026:CDS | 60.0% | |
TGTCTGCTGGAAAGCAGCCG+AGG | - | chr3.3:40498935-40498954 | None:intergenic | 60.0% | |
! | CGGCTGCTTTCCAGCAGACA+CGG | + | chr3.3:40498935-40498954 | MS.gene22026:intron | 60.0% |
!! | AAGAGGCGGCTTGCTGGATC+TGG | + | chr3.3:40500547-40500566 | MS.gene22026:CDS | 60.0% |
!! | AGAGGCGGCTTGCTGGATCT+GGG | + | chr3.3:40500548-40500567 | MS.gene22026:CDS | 60.0% |
!! | AGGTGGTGGAGGTAGGAAGC+AGG | - | chr3.3:40495208-40495227 | None:intergenic | 60.0% |
AAGCGGAGAGGTGGAGAGGG+TGG | - | chr3.3:40495247-40495266 | None:intergenic | 65.0% | |
GCCTCAAAGAGGCGGCTTGC+TGG | + | chr3.3:40500541-40500560 | MS.gene22026:CDS | 65.0% | |
GGCACATTGGCGGGAGTCCT+TGG | + | chr3.3:40500129-40500148 | MS.gene22026:CDS | 65.0% | |
CGGAGAGGTGGAGAGGGTGG+AGG | - | chr3.3:40495244-40495263 | None:intergenic | 70.0% | |
GTGGAGAGGGTGGAGGAGCG+CGG | - | chr3.3:40495237-40495256 | None:intergenic | 70.0% | |
!! | GCGGAGGAGGTGGTGGAGGT+AGG | - | chr3.3:40495215-40495234 | None:intergenic | 70.0% |
! | GAGAGGGTGGAGGAGCGCGG+CGG | - | chr3.3:40495234-40495253 | None:intergenic | 75.0% |
! | GAGCGCGGCGGAGGAGGTGG+TGG | - | chr3.3:40495222-40495241 | None:intergenic | 80.0% |
!! | AGGGTGGAGGAGCGCGGCGG+AGG | - | chr3.3:40495231-40495250 | None:intergenic | 80.0% |
!! | CGCGGCGGAGGAGGTGGTGG+AGG | - | chr3.3:40495219-40495238 | None:intergenic | 80.0% |
!! | GAGGAGCGCGGCGGAGGAGG+TGG | - | chr3.3:40495225-40495244 | None:intergenic | 80.0% |
!! | GTGGAGGAGCGCGGCGGAGG+AGG | - | chr3.3:40495228-40495247 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.3 | gene | 40495131 | 40500576 | 40495131 | ID=MS.gene22026 |
chr3.3 | mRNA | 40495131 | 40500576 | 40495131 | ID=MS.gene22026.t1;Parent=MS.gene22026 |
chr3.3 | exon | 40495131 | 40495391 | 40495131 | ID=MS.gene22026.t1.exon1;Parent=MS.gene22026.t1 |
chr3.3 | CDS | 40495131 | 40495391 | 40495131 | ID=cds.MS.gene22026.t1;Parent=MS.gene22026.t1 |
chr3.3 | exon | 40495849 | 40496029 | 40495849 | ID=MS.gene22026.t1.exon2;Parent=MS.gene22026.t1 |
chr3.3 | CDS | 40495849 | 40496029 | 40495849 | ID=cds.MS.gene22026.t1;Parent=MS.gene22026.t1 |
chr3.3 | exon | 40496661 | 40496746 | 40496661 | ID=MS.gene22026.t1.exon3;Parent=MS.gene22026.t1 |
chr3.3 | CDS | 40496661 | 40496746 | 40496661 | ID=cds.MS.gene22026.t1;Parent=MS.gene22026.t1 |
chr3.3 | exon | 40497358 | 40497462 | 40497358 | ID=MS.gene22026.t1.exon4;Parent=MS.gene22026.t1 |
chr3.3 | CDS | 40497358 | 40497462 | 40497358 | ID=cds.MS.gene22026.t1;Parent=MS.gene22026.t1 |
chr3.3 | exon | 40498121 | 40498183 | 40498121 | ID=MS.gene22026.t1.exon5;Parent=MS.gene22026.t1 |
chr3.3 | CDS | 40498121 | 40498183 | 40498121 | ID=cds.MS.gene22026.t1;Parent=MS.gene22026.t1 |
chr3.3 | exon | 40498304 | 40498413 | 40498304 | ID=MS.gene22026.t1.exon6;Parent=MS.gene22026.t1 |
chr3.3 | CDS | 40498304 | 40498413 | 40498304 | ID=cds.MS.gene22026.t1;Parent=MS.gene22026.t1 |
chr3.3 | exon | 40498757 | 40498876 | 40498757 | ID=MS.gene22026.t1.exon7;Parent=MS.gene22026.t1 |
chr3.3 | CDS | 40498757 | 40498876 | 40498757 | ID=cds.MS.gene22026.t1;Parent=MS.gene22026.t1 |
chr3.3 | exon | 40499042 | 40499117 | 40499042 | ID=MS.gene22026.t1.exon8;Parent=MS.gene22026.t1 |
chr3.3 | CDS | 40499042 | 40499117 | 40499042 | ID=cds.MS.gene22026.t1;Parent=MS.gene22026.t1 |
chr3.3 | exon | 40499236 | 40499309 | 40499236 | ID=MS.gene22026.t1.exon9;Parent=MS.gene22026.t1 |
chr3.3 | CDS | 40499236 | 40499309 | 40499236 | ID=cds.MS.gene22026.t1;Parent=MS.gene22026.t1 |
chr3.3 | exon | 40499456 | 40499576 | 40499456 | ID=MS.gene22026.t1.exon10;Parent=MS.gene22026.t1 |
chr3.3 | CDS | 40499456 | 40499576 | 40499456 | ID=cds.MS.gene22026.t1;Parent=MS.gene22026.t1 |
chr3.3 | exon | 40499857 | 40499954 | 40499857 | ID=MS.gene22026.t1.exon11;Parent=MS.gene22026.t1 |
chr3.3 | CDS | 40499857 | 40499954 | 40499857 | ID=cds.MS.gene22026.t1;Parent=MS.gene22026.t1 |
chr3.3 | exon | 40500063 | 40500186 | 40500063 | ID=MS.gene22026.t1.exon12;Parent=MS.gene22026.t1 |
chr3.3 | CDS | 40500063 | 40500186 | 40500063 | ID=cds.MS.gene22026.t1;Parent=MS.gene22026.t1 |
chr3.3 | exon | 40500439 | 40500576 | 40500439 | ID=MS.gene22026.t1.exon13;Parent=MS.gene22026.t1 |
chr3.3 | CDS | 40500439 | 40500576 | 40500439 | ID=cds.MS.gene22026.t1;Parent=MS.gene22026.t1 |
Gene Sequence |
Protein sequence |