Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22437.t1 | XP_003625622.1 | 94.6 | 352 | 12 | 1 | 1 | 345 | 1 | 352 | 8.90E-154 | 553.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22437.t1 | Q9S752 | 65.9 | 264 | 84 | 3 | 83 | 341 | 107 | 369 | 1.8e-94 | 347.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22437.t1 | Q2HV40 | 94.6 | 352 | 12 | 1 | 1 | 345 | 1 | 352 | 6.4e-154 | 553.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050479 | MS.gene22437 | 0.807875 | 4.08E-50 | -1.69E-46 |
| MS.gene050547 | MS.gene22437 | 0.822906 | 1.84E-53 | -1.69E-46 |
| MS.gene052615 | MS.gene22437 | -0.801048 | 1.08E-48 | -1.69E-46 |
| MS.gene055289 | MS.gene22437 | -0.803356 | 3.63E-49 | -1.69E-46 |
| MS.gene055370 | MS.gene22437 | -0.801024 | 1.09E-48 | -1.69E-46 |
| MS.gene057196 | MS.gene22437 | -0.804109 | 2.53E-49 | -1.69E-46 |
| MS.gene059718 | MS.gene22437 | -0.809015 | 2.33E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22437.t1 | MTR_7g101150 | 96.591 | 352 | 5 | 1 | 1 | 345 | 1 | 352 | 0.0 | 699 |
| MS.gene22437.t1 | MTR_7g101150 | 90.057 | 352 | 4 | 2 | 1 | 345 | 1 | 328 | 0.0 | 637 |
| MS.gene22437.t1 | MTR_1g064680 | 68.091 | 351 | 99 | 7 | 1 | 344 | 1 | 345 | 1.12e-150 | 428 |
| MS.gene22437.t1 | MTR_2g022210 | 50.193 | 259 | 120 | 4 | 96 | 345 | 127 | 385 | 2.30e-85 | 263 |
| MS.gene22437.t1 | MTR_4g117250 | 45.364 | 302 | 146 | 8 | 58 | 345 | 61 | 357 | 3.14e-82 | 254 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22437.t1 | AT3G09770 | 65.169 | 267 | 87 | 3 | 80 | 341 | 104 | 369 | 1.09e-119 | 351 |
| MS.gene22437.t1 | AT3G53410 | 56.667 | 300 | 105 | 7 | 48 | 345 | 21 | 297 | 2.63e-108 | 318 |
| MS.gene22437.t1 | AT5G03200 | 51.143 | 350 | 143 | 7 | 1 | 339 | 1 | 333 | 6.31e-105 | 311 |
| MS.gene22437.t1 | AT3G09770 | 60.169 | 236 | 88 | 3 | 80 | 310 | 104 | 338 | 4.60e-93 | 281 |
| MS.gene22437.t1 | AT5G19080 | 47.651 | 298 | 140 | 6 | 59 | 345 | 83 | 375 | 3.09e-85 | 262 |
| MS.gene22437.t1 | AT3G06140 | 45.946 | 296 | 146 | 6 | 56 | 345 | 69 | 356 | 3.70e-76 | 238 |
Find 115 sgRNAs with CRISPR-Local
Find 376 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTTTGATGCTGCCGTATC+TGG | 0.118140 | 7.1:-8545454 | MS.gene22437:CDS |
| AATTGATGAGGTGCGATTTC+GGG | 0.192329 | 7.1:+8545760 | None:intergenic |
| GAATTGATGAGGTGCGATTT+CGG | 0.285307 | 7.1:+8545759 | None:intergenic |
| ACAACCAGTTGAAAGGCTTT+TGG | 0.292916 | 7.1:-8540927 | MS.gene22437:CDS |
| GGATAATGCATGGGTGGGTT+AGG | 0.322234 | 7.1:+8545712 | None:intergenic |
| ATTTCGGGTTGTGGTGTTAC+CGG | 0.350931 | 7.1:+8545775 | None:intergenic |
| ATCTGATCCATCATGATTAC+CGG | 0.362191 | 7.1:+8541527 | None:intergenic |
| GTTACCGGAGGTGGTGGTGG+TGG | 0.364733 | 7.1:+8545790 | None:intergenic |
| TCCTCATATGGATCCTGCTT+GGG | 0.365700 | 7.1:-8545635 | MS.gene22437:CDS |
| CAACTGGTTGTCTGCAAATC+GGG | 0.370008 | 7.1:+8540939 | None:intergenic |
| TCAACTGGTTGTCTGCAAAT+CGG | 0.372927 | 7.1:+8540938 | None:intergenic |
| TGGATCCTGCTTGGGTTTCT+CGG | 0.382151 | 7.1:-8545627 | MS.gene22437:CDS |
| TTAGGGTACGGTGCGGCACC+AGG | 0.386472 | 7.1:+8545730 | None:intergenic |
| ACTTCTGTCCAAGACCTTGC+TGG | 0.386692 | 7.1:+8541661 | None:intergenic |
| GCTTGAGTTATCTGAGAGTT+TGG | 0.387330 | 7.1:+8541483 | None:intergenic |
| TATGAGCTGCAGGAGATATA+TGG | 0.402009 | 7.1:-8541387 | MS.gene22437:CDS |
| CCTTTGATGCTGCCGTATCT+GGG | 0.410660 | 7.1:-8545453 | MS.gene22437:CDS |
| TGGTGGTGGGTGAGTCCGTC+GGG | 0.414867 | 7.1:+8545804 | None:intergenic |
| ATCTCCAAAAGCCTTTCAAC+TGG | 0.415200 | 7.1:+8540923 | None:intergenic |
| GGTTGTGGTGTTACCGGAGG+TGG | 0.426707 | 7.1:+8545781 | None:intergenic |
| GCCTCATCATCATCCTCATA+TGG | 0.433411 | 7.1:-8545647 | MS.gene22437:CDS |
| GGAGTCAGATTTAGTAAAGG+TGG | 0.440813 | 7.1:-8541595 | MS.gene22437:CDS |
| TGTTCACCCCTGCCGACATA+TGG | 0.446468 | 7.1:-8541277 | MS.gene22437:intron |
| TTACCGGAGGTGGTGGTGGT+GGG | 0.450767 | 7.1:+8545791 | None:intergenic |
| GTGGTGGTGGGTGAGTCCGT+CGG | 0.453546 | 7.1:+8545803 | None:intergenic |
| TTTAGACAGCAAGCTGGAAC+TGG | 0.459183 | 7.1:-8541639 | MS.gene22437:CDS |
| GATAATGCATGGGTGGGTTA+GGG | 0.461186 | 7.1:+8545713 | None:intergenic |
| TCACCTGATGAGGAAAATCC+TGG | 0.463626 | 7.1:-8545496 | MS.gene22437:CDS |
| ATCCTCATATGGATCCTGCT+TGG | 0.463662 | 7.1:-8545636 | MS.gene22437:CDS |
| GCGGTGTTTGAGAAGGAAAA+AGG | 0.465111 | 7.1:-8541462 | MS.gene22437:CDS |
| TGTGGTGTTACCGGAGGTGG+TGG | 0.469980 | 7.1:+8545784 | None:intergenic |
| CTGCAGGAGATATATGGTAT+TGG | 0.477865 | 7.1:-8541381 | MS.gene22437:CDS |
| GTACAATTCCAGCAAGGTCT+TGG | 0.478019 | 7.1:-8541669 | MS.gene22437:CDS |
| GGTGTTACCGGAGGTGGTGG+TGG | 0.484755 | 7.1:+8545787 | None:intergenic |
| TGAGGTGCGATTTCGGGTTG+TGG | 0.485233 | 7.1:+8545766 | None:intergenic |
| TTCTTTGCAAAAGAAGATGA+AGG | 0.485414 | 7.1:-8541738 | MS.gene22437:CDS |
| TGGGTGAGTCCGTCGGGAAG+CGG | 0.486665 | 7.1:+8545810 | None:intergenic |
| AAATGATGTTAATATTAAGA+AGG | 0.487123 | 7.1:-8545533 | MS.gene22437:CDS |
| TGAATATACCATATGTCGGC+AGG | 0.487759 | 7.1:+8541269 | None:intergenic |
| GGAGATAAAGGTAGGGACTG+AGG | 0.488255 | 7.1:-8540906 | MS.gene22437:CDS |
| AAATCGGGCATCTATTTGTC+TGG | 0.489041 | 7.1:+8540954 | None:intergenic |
| CCCAGATACGGCAGCATCAA+AGG | 0.490547 | 7.1:+8545453 | None:intergenic |
| TACAGTCACAGGTGCAAGAT+GGG | 0.494387 | 7.1:+8541689 | None:intergenic |
| GCTTTCTGATGCTCAACAAA+AGG | 0.497062 | 7.1:+8545568 | None:intergenic |
| TCACCCACCACCACCACCTC+CGG | 0.498207 | 7.1:-8545794 | MS.gene22437:CDS |
| AAGCAGATCTTGTCGGTGAA+TGG | 0.499467 | 7.1:-8541417 | MS.gene22437:CDS |
| TCGACGACGGTTGTGTCCGC+CGG | 0.500495 | 7.1:+8545840 | None:intergenic |
| TGAGGAGTCAGATTTAGTAA+AGG | 0.513325 | 7.1:-8541598 | MS.gene22437:CDS |
| TGATGCTCAACAAAAGGTGC+AGG | 0.520299 | 7.1:+8545574 | None:intergenic |
| AGTTGTTAAGCAGATCTTGT+CGG | 0.530254 | 7.1:-8541424 | MS.gene22437:CDS |
| TAACCAGGGTAATGATATTG+AGG | 0.535672 | 7.1:+8545691 | None:intergenic |
| GCATCATCCGGTAATCATGA+TGG | 0.536466 | 7.1:-8541534 | MS.gene22437:CDS |
| ACCCAAGCAGGATCCATATG+AGG | 0.538916 | 7.1:+8545634 | None:intergenic |
| TGGAATGCGGTATGAGCTGC+AGG | 0.539501 | 7.1:-8541397 | MS.gene22437:CDS |
| TTTGCAGACAACCAGTTGAA+AGG | 0.542468 | 7.1:-8540934 | MS.gene22437:CDS |
| GAGTCAGATTTAGTAAAGGT+GGG | 0.543543 | 7.1:-8541594 | MS.gene22437:CDS |
| CATTGTAATTTCACCTGATG+AGG | 0.545895 | 7.1:-8545506 | MS.gene22437:CDS |
| GTTTCTCGGTACTACCCTTG+TGG | 0.547007 | 7.1:-8545613 | MS.gene22437:CDS |
| GAAAACTAACCTCCCAGATA+CGG | 0.551062 | 7.1:+8545441 | None:intergenic |
| GCAAGATGGGTTACCTTGGT+CGG | 0.553514 | 7.1:+8541702 | None:intergenic |
| GTGAAGGCAGATGCATCATC+CGG | 0.554451 | 7.1:-8541546 | MS.gene22437:CDS |
| TTTAGTAAAGGTGGGTGACA+TGG | 0.558071 | 7.1:-8541586 | MS.gene22437:CDS |
| TGCTGGAATTGTACAGTCAC+AGG | 0.558091 | 7.1:+8541678 | None:intergenic |
| GCATCTGCCTTCACTGCTAG+AGG | 0.560301 | 7.1:+8541555 | None:intergenic |
| TGAGGATGATGATGAGGCAT+AGG | 0.565184 | 7.1:+8545652 | None:intergenic |
| AACTCAAGCGGTGTTTGAGA+AGG | 0.567507 | 7.1:-8541469 | MS.gene22437:CDS |
| TGCATGGGTGGGTTAGGGTA+CGG | 0.569196 | 7.1:+8545718 | None:intergenic |
| AAGCGGTGGCGTGTCGACGA+CGG | 0.569497 | 7.1:+8545827 | None:intergenic |
| TGATGATGAGGCATAGGTAT+TGG | 0.570267 | 7.1:+8545658 | None:intergenic |
| TGATTCACCACGGGTCCACA+AGG | 0.574272 | 7.1:+8545598 | None:intergenic |
| ATGGGTAATATCTCAAGCAC+CGG | 0.578879 | 7.1:-8545859 | MS.gene22437:CDS |
| ATTGGTGGTGGATAATAACC+AGG | 0.584398 | 7.1:+8545676 | None:intergenic |
| TGTTTACCCTCTAGCAGTGA+AGG | 0.588610 | 7.1:-8541562 | MS.gene22437:CDS |
| TGATGAGGCATAGGTATTGG+TGG | 0.589183 | 7.1:+8545661 | None:intergenic |
| GAATATACCATATGTCGGCA+GGG | 0.589767 | 7.1:+8541270 | None:intergenic |
| GTACTACCCTTGTGGACCCG+TGG | 0.593118 | 7.1:-8545605 | MS.gene22437:CDS |
| CATCAAAGGTAAACGAAACA+AGG | 0.594203 | 7.1:+8545467 | None:intergenic |
| GTGAGTCCGTCGGGAAGCGG+TGG | 0.599821 | 7.1:+8545813 | None:intergenic |
| CTCATCAGGTGAAATTACAA+TGG | 0.602365 | 7.1:+8545507 | None:intergenic |
| CCTCATCAATTCGTTTACCC+TGG | 0.603106 | 7.1:-8545748 | MS.gene22437:CDS |
| TCCATATGAGGATGATGATG+AGG | 0.604041 | 7.1:+8545646 | None:intergenic |
| CTGCATCCTCACACCGACCA+AGG | 0.607910 | 7.1:-8541715 | MS.gene22437:CDS |
| TAGGGTACGGTGCGGCACCA+GGG | 0.608246 | 7.1:+8545731 | None:intergenic |
| TATCCTCAATATCATTACCC+TGG | 0.611148 | 7.1:-8545694 | MS.gene22437:CDS |
| GACACGCCACCGCTTCCCGA+CGG | 0.612325 | 7.1:-8545819 | MS.gene22437:CDS |
| CAGAAGTTTAGACAGCAAGC+TGG | 0.612738 | 7.1:-8541645 | MS.gene22437:CDS |
| GTACAGTCACAGGTGCAAGA+TGG | 0.616443 | 7.1:+8541688 | None:intergenic |
| TCGGGTTGTGGTGTTACCGG+AGG | 0.619613 | 7.1:+8545778 | None:intergenic |
| AATATACCATATGTCGGCAG+GGG | 0.619940 | 7.1:+8541271 | None:intergenic |
| ATGCTGAATATACCATATGT+CGG | 0.621925 | 7.1:+8541265 | None:intergenic |
| ATATGGTATTGGAAATTCAG+TGG | 0.622521 | 7.1:-8541370 | MS.gene22437:CDS |
| GGTAATATCTCAAGCACCGG+CGG | 0.625709 | 7.1:-8545856 | MS.gene22437:CDS |
| GGTGCAGGTTGATTCACCAC+GGG | 0.630188 | 7.1:+8545589 | None:intergenic |
| CATCTGCCTTCACTGCTAGA+GGG | 0.633223 | 7.1:+8541556 | None:intergenic |
| AGGTGCAAGATGGGTTACCT+TGG | 0.637199 | 7.1:+8541698 | None:intergenic |
| TATTGAGGATAATGCATGGG+TGG | 0.640046 | 7.1:+8545706 | None:intergenic |
| TAGTACCGAGAAACCCAAGC+AGG | 0.641166 | 7.1:+8545622 | None:intergenic |
| TGATATTGAGGATAATGCAT+GGG | 0.642567 | 7.1:+8545703 | None:intergenic |
| AAACTCTCAGATAACTCAAG+CGG | 0.648497 | 7.1:-8541481 | MS.gene22437:CDS |
| TGAGGCATAGGTATTGGTGG+TGG | 0.650004 | 7.1:+8545664 | None:intergenic |
| ATGATATTGAGGATAATGCA+TGG | 0.652411 | 7.1:+8545702 | None:intergenic |
| CCAGGGTAAACGAATTGATG+AGG | 0.654862 | 7.1:+8545748 | None:intergenic |
| ATTGAGGATAATGCATGGGT+GGG | 0.663150 | 7.1:+8545707 | None:intergenic |
| GGGTGAACAATTGTGTCGCG+AGG | 0.663631 | 7.1:+8541291 | None:intergenic |
| GGGTTACCTTGGTCGGTGTG+AGG | 0.665482 | 7.1:+8541709 | None:intergenic |
| AGGTGCAGGTTGATTCACCA+CGG | 0.673012 | 7.1:+8545588 | None:intergenic |
| CATGTGTAGTGGATGTGCAA+AGG | 0.675895 | 7.1:-8540987 | MS.gene22437:CDS |
| TTGATGCTGCCGTATCTGGG+AGG | 0.677621 | 7.1:-8545450 | MS.gene22437:intron |
| AAATTCAGTGGAGAGTGATG+TGG | 0.682565 | 7.1:-8541358 | MS.gene22437:CDS |
| GTGACTGTACAATTCCAGCA+AGG | 0.698948 | 7.1:-8541675 | MS.gene22437:CDS |
| TCTTGTCGGTGAATGGAATG+CGG | 0.716236 | 7.1:-8541410 | MS.gene22437:CDS |
| GGGTGGGTTAGGGTACGGTG+CGG | 0.722461 | 7.1:+8545723 | None:intergenic |
| GATGTGGATGACAATGAACA+AGG | 0.723839 | 7.1:-8541342 | MS.gene22437:CDS |
| GATTCACCACGGGTCCACAA+GGG | 0.725292 | 7.1:+8545599 | None:intergenic |
| TTGGTGGTGGATAATAACCA+GGG | 0.728249 | 7.1:+8545677 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAATATAATGAACTT+CGG | + | chr7.1:8543598-8543617 | None:intergenic | 10.0% |
| !! | GTATATATACATAATATAAT+AGG | + | chr7.1:8543050-8543069 | None:intergenic | 10.0% |
| !! | AAATGATGTTAATATTAAGA+AGG | - | chr7.1:8541227-8541246 | MS.gene22437:intron | 15.0% |
| !! | AAATTAGTAGTATTAATTAG+GGG | - | chr7.1:8543812-8543831 | MS.gene22437:intron | 15.0% |
| !! | AAGATACATATATATATGAA+AGG | + | chr7.1:8542833-8542852 | None:intergenic | 15.0% |
| !! | ACAAATTAGTAGTATTAATT+AGG | - | chr7.1:8543810-8543829 | MS.gene22437:intron | 15.0% |
| !! | CAAATTAGTAGTATTAATTA+GGG | - | chr7.1:8543811-8543830 | MS.gene22437:intron | 15.0% |
| !! | GCAAAGAATTAATAATAAAT+TGG | + | chr7.1:8543325-8543344 | None:intergenic | 15.0% |
| !! | TAAAATCATAATGATGATTA+TGG | - | chr7.1:8544926-8544945 | MS.gene22437:intron | 15.0% |
| !! | TAATTTCTATGAGATATTAA+GGG | + | chr7.1:8541765-8541784 | None:intergenic | 15.0% |
| !! | TTAATATCTCATAGAAATTA+GGG | - | chr7.1:8541765-8541784 | MS.gene22437:intron | 15.0% |
| !! | TTTCTTGAAGAATTTATTAA+TGG | - | chr7.1:8541532-8541551 | MS.gene22437:CDS | 15.0% |
| !!! | AAATTGTACTTTTATAATGA+AGG | + | chr7.1:8542923-8542942 | None:intergenic | 15.0% |
| !!! | AATGTGTTATTTTAATGTTT+TGG | - | chr7.1:8541368-8541387 | MS.gene22437:CDS | 15.0% |
| !!! | AGTTTATTTTTCTTGATTAA+AGG | - | chr7.1:8542747-8542766 | MS.gene22437:intron | 15.0% |
| !!! | ATGTGTTATTTTAATGTTTT+GGG | - | chr7.1:8541369-8541388 | MS.gene22437:CDS | 15.0% |
| !!! | GGTCTTATAAAAAAATTAAT+TGG | - | chr7.1:8543299-8543318 | MS.gene22437:intron | 15.0% |
| !!! | GTTTATTTTTCTTGATTAAA+GGG | - | chr7.1:8542748-8542767 | MS.gene22437:intron | 15.0% |
| !!! | TGTTTTATAATAAAGTTTAC+AGG | - | chr7.1:8541433-8541452 | MS.gene22437:CDS | 15.0% |
| !!! | TTTATTTTTCTTGATTAAAG+GGG | - | chr7.1:8542749-8542768 | MS.gene22437:intron | 15.0% |
| !! | CGAAAAATTTCATTCAAAAA+AGG | + | chr7.1:8545521-8545540 | None:intergenic | 20.0% |
| !! | CTAATTTCTATGAGATATTA+AGG | + | chr7.1:8541766-8541785 | None:intergenic | 20.0% |
| !! | CTTAATATCTCATAGAAATT+AGG | - | chr7.1:8541764-8541783 | MS.gene22437:intron | 20.0% |
| !! | GGACAAAAATAAAATCAAAT+GGG | - | chr7.1:8543894-8543913 | MS.gene22437:intron | 20.0% |
| !! | TAAATTCTTCAAGAAACATT+TGG | + | chr7.1:8541528-8541547 | None:intergenic | 20.0% |
| !! | TACACAAAAATAGCAAAATA+CGG | + | chr7.1:8543977-8543996 | None:intergenic | 20.0% |
| !! | TTTATTACACATACAAACAA+AGG | + | chr7.1:8543769-8543788 | None:intergenic | 20.0% |
| !!! | ATTTAAAATAGGGTTAATTC+AGG | + | chr7.1:8543262-8543281 | None:intergenic | 20.0% |
| !!! | TAATTTTCAGCAGTTAAATT+TGG | + | chr7.1:8545696-8545715 | None:intergenic | 20.0% |
| !!! | TATTAACTTTTCAATGTTTG+AGG | - | chr7.1:8545144-8545163 | MS.gene22437:intron | 20.0% |
| !!! | TTATTTTTCTTGATTAAAGG+GGG | - | chr7.1:8542750-8542769 | MS.gene22437:intron | 20.0% |
| !!! | TTCTTTTGCAAAGAAAAATA+TGG | + | chr7.1:8545017-8545036 | None:intergenic | 20.0% |
| !!! | TTGTATGTTTTGTTTAAGAA+TGG | - | chr7.1:8541595-8541614 | MS.gene22437:CDS | 20.0% |
| !!! | TTTAAAATAGGGTTAATTCA+GGG | + | chr7.1:8543261-8543280 | None:intergenic | 20.0% |
| !!! | TTTGAAACAATTTCAGTTTT+AGG | - | chr7.1:8545644-8545663 | MS.gene22437:CDS | 20.0% |
| !!! | TTTTTTGAAGCACTTATATT+TGG | + | chr7.1:8544445-8544464 | None:intergenic | 20.0% |
| ! | AAGAAATGTGAAAAAAGCAA+AGG | + | chr7.1:8543687-8543706 | None:intergenic | 25.0% |
| ! | AATAAGATATTTGCCAAGAT+TGG | + | chr7.1:8545601-8545620 | None:intergenic | 25.0% |
| ! | ACATTGTGAGCATTTATAAT+TGG | - | chr7.1:8542862-8542881 | MS.gene22437:intron | 25.0% |
| ! | ACTCTGTTGAACTTATAATA+CGG | - | chr7.1:8542431-8542450 | MS.gene22437:intron | 25.0% |
| ! | ACTGAAATTGTTTCAAAAGA+AGG | + | chr7.1:8545641-8545660 | None:intergenic | 25.0% |
| ! | ACTGCTGAAAATTACTTATT+TGG | - | chr7.1:8545702-8545721 | MS.gene22437:CDS | 25.0% |
| ! | AGAAATGTGAAAAAAGCAAA+GGG | + | chr7.1:8543686-8543705 | None:intergenic | 25.0% |
| ! | AGCAAAATACGGAAAATTAA+AGG | + | chr7.1:8543966-8543985 | None:intergenic | 25.0% |
| ! | ATATGAAAGGAAACAAAACA+AGG | + | chr7.1:8542820-8542839 | None:intergenic | 25.0% |
| ! | ATCAATATTATGACCAATCT+TGG | - | chr7.1:8545585-8545604 | MS.gene22437:CDS | 25.0% |
| ! | ATGCATCTAGTAATTTGAAA+AGG | - | chr7.1:8543858-8543877 | MS.gene22437:intron | 25.0% |
| ! | ATGTTGTTAATCTCATATAG+CGG | + | chr7.1:8544107-8544126 | None:intergenic | 25.0% |
| ! | ATTATAGACAAAATATGACG+AGG | + | chr7.1:8544247-8544266 | None:intergenic | 25.0% |
| ! | CAAAATAGAGACTACAATTA+AGG | + | chr7.1:8542057-8542076 | None:intergenic | 25.0% |
| ! | CATCCTGATTACTAAAAATA+TGG | - | chr7.1:8542118-8542137 | MS.gene22437:intron | 25.0% |
| ! | CTTAATCGGTAATGTATATT+AGG | + | chr7.1:8544683-8544702 | None:intergenic | 25.0% |
| ! | GGGACAAAAATAAAATCAAA+TGG | - | chr7.1:8543893-8543912 | MS.gene22437:intron | 25.0% |
| ! | TAAAAATATGGCTAAGTAGT+AGG | - | chr7.1:8542130-8542149 | MS.gene22437:intron | 25.0% |
| ! | TACATAATACTCCTTGATAT+GGG | + | chr7.1:8544807-8544826 | None:intergenic | 25.0% |
| ! | TCATTCAAATTGTCGTAATT+GGG | + | chr7.1:8542010-8542029 | None:intergenic | 25.0% |
| ! | TGAAAAGGAGTTTACATTTA+GGG | - | chr7.1:8543873-8543892 | MS.gene22437:intron | 25.0% |
| ! | TGAATGACAAAAGATATTGT+TGG | - | chr7.1:8542023-8542042 | MS.gene22437:intron | 25.0% |
| ! | TGCTCTTAAGTTTACTTAAT+CGG | + | chr7.1:8544697-8544716 | None:intergenic | 25.0% |
| ! | TTACATAATACTCCTTGATA+TGG | + | chr7.1:8544808-8544827 | None:intergenic | 25.0% |
| ! | TTATAAATGCTCACAATGTT+CGG | + | chr7.1:8542861-8542880 | None:intergenic | 25.0% |
| ! | TTGAAAAGGAGTTTACATTT+AGG | - | chr7.1:8543872-8543891 | MS.gene22437:intron | 25.0% |
| ! | TTTATAATGAAGGAGGATAT+TGG | + | chr7.1:8542913-8542932 | None:intergenic | 25.0% |
| !! | CTTAATTGTAGTCTCTATTT+TGG | - | chr7.1:8542055-8542074 | MS.gene22437:intron | 25.0% |
| !! | TATTAATTAGGGGTATGTTT+AGG | - | chr7.1:8543822-8543841 | MS.gene22437:intron | 25.0% |
| !! | TTGTACTTTTATAATGAAGG+AGG | + | chr7.1:8542920-8542939 | None:intergenic | 25.0% |
| !!! | ACATTACGAACTGATTTTAT+AGG | + | chr7.1:8541807-8541826 | None:intergenic | 25.0% |
| !!! | AGTATAATGAACTTTTTGGT+GGG | + | chr7.1:8543640-8543659 | None:intergenic | 25.0% |
| !!! | ATGTTTTGTTTAAGAATGGA+TGG | - | chr7.1:8541599-8541618 | MS.gene22437:CDS | 25.0% |
| !!! | CATTACGAACTGATTTTATA+GGG | + | chr7.1:8541806-8541825 | None:intergenic | 25.0% |
| !!! | GGGTATTTATTTTTCTTGTA+TGG | - | chr7.1:8541389-8541408 | MS.gene22437:CDS | 25.0% |
| !!! | TAGCCATATTTTTAGTAATC+AGG | + | chr7.1:8542124-8542143 | None:intergenic | 25.0% |
| !!! | TGTTTTGTTTAAGAATGGAT+GGG | - | chr7.1:8541600-8541619 | MS.gene22437:CDS | 25.0% |
| AAAATCCCAAGATTCAACAA+TGG | - | chr7.1:8544461-8544480 | MS.gene22437:intron | 30.0% | |
| AAATGTGAAAAAAGCAAAGG+GGG | + | chr7.1:8543684-8543703 | None:intergenic | 30.0% | |
| AAGCTCTCTAACATAGAAAA+CGG | - | chr7.1:8542951-8542970 | MS.gene22437:intron | 30.0% | |
| AAGTAGCGTTTGTATTAAGT+TGG | - | chr7.1:8542650-8542669 | MS.gene22437:intron | 30.0% | |
| AATAGAGACTACAATTAAGG+AGG | + | chr7.1:8542054-8542073 | None:intergenic | 30.0% | |
| ACACTAAAAAGATCTATAGC+TGG | + | chr7.1:8543072-8543091 | None:intergenic | 30.0% | |
| AGTAAGCTAATTGAATGGAA+AGG | - | chr7.1:8542498-8542517 | MS.gene22437:intron | 30.0% | |
| AGTTGATTGAATGATACTGA+TGG | - | chr7.1:8545547-8545566 | MS.gene22437:CDS | 30.0% | |
| ATCAAAGATTGTGCTAGTTA+TGG | + | chr7.1:8541720-8541739 | None:intergenic | 30.0% | |
| ATCAAATCGATGTTCAAATC+AGG | - | chr7.1:8544616-8544635 | MS.gene22437:intron | 30.0% | |
| ATCATTCCATTGTTGAATCT+TGG | + | chr7.1:8544470-8544489 | None:intergenic | 30.0% | |
| ATCTCATAGAAATTAGGGTT+AGG | - | chr7.1:8541770-8541789 | MS.gene22437:intron | 30.0% | |
| ATGATATTGAGGATAATGCA+TGG | + | chr7.1:8541061-8541080 | None:intergenic | 30.0% | |
| ATGCTGAATATACCATATGT+CGG | + | chr7.1:8545498-8545517 | None:intergenic | 30.0% | |
| ATTCAGAGTTTACATAGACA+TGG | + | chr7.1:8542253-8542272 | None:intergenic | 30.0% | |
| CAAATGGGTGTTTAGATATA+GGG | - | chr7.1:8543909-8543928 | MS.gene22437:intron | 30.0% | |
| CACTAAAAAGTCTAAGTGAA+AGG | - | chr7.1:8542541-8542560 | MS.gene22437:intron | 30.0% | |
| CATAATGATGATTATGGATG+TGG | - | chr7.1:8544932-8544951 | MS.gene22437:intron | 30.0% | |
| CATACAAACAAAGGACAATT+TGG | + | chr7.1:8543760-8543779 | None:intergenic | 30.0% | |
| CGTGTTTATGTTTCAAAGTA+AGG | - | chr7.1:8542372-8542391 | MS.gene22437:intron | 30.0% | |
| CTTTACTTTAGTTGTTCTGA+AGG | - | chr7.1:8544959-8544978 | MS.gene22437:intron | 30.0% | |
| GAAATGTGAAAAAAGCAAAG+GGG | + | chr7.1:8543685-8543704 | None:intergenic | 30.0% | |
| GTCATTCAAATTGTCGTAAT+TGG | + | chr7.1:8542011-8542030 | None:intergenic | 30.0% | |
| TAAAATCAGTTCGTAATGTG+AGG | - | chr7.1:8541808-8541827 | MS.gene22437:intron | 30.0% | |
| TCAAATGGGTGTTTAGATAT+AGG | - | chr7.1:8543908-8543927 | MS.gene22437:intron | 30.0% | |
| TCATTCCATTGTTGAATCTT+GGG | + | chr7.1:8544469-8544488 | None:intergenic | 30.0% | |
| TCTCATAGAAATTAGGGTTA+GGG | - | chr7.1:8541771-8541790 | MS.gene22437:intron | 30.0% | |
| TGAGATATTAAGGGTAGAAA+AGG | + | chr7.1:8541756-8541775 | None:intergenic | 30.0% | |
| TGATATTGAGGATAATGCAT+GGG | + | chr7.1:8541060-8541079 | None:intergenic | 30.0% | |
| TTCTTTGCAAAAGAAGATGA+AGG | - | chr7.1:8545022-8545041 | MS.gene22437:intron | 30.0% | |
| ! | AAAACAAGGTAGAACCTTTT+CGG | + | chr7.1:8542806-8542825 | None:intergenic | 30.0% |
| ! | AACATGTTTTCTGTCAAATG+TGG | - | chr7.1:8544216-8544235 | MS.gene22437:intron | 30.0% |
| ! | AATGGTGTCAAAATAAGAGT+TGG | - | chr7.1:8541550-8541569 | MS.gene22437:CDS | 30.0% |
| ! | ACATGTTTTCTGTCAAATGT+GGG | - | chr7.1:8544217-8544236 | MS.gene22437:intron | 30.0% |
| ! | ATATGGTATTGGAAATTCAG+TGG | - | chr7.1:8545390-8545409 | MS.gene22437:intron | 30.0% |
| ! | ATTCTTTGCAAACACGTTTT+AGG | - | chr7.1:8543336-8543355 | MS.gene22437:intron | 30.0% |
| ! | CTATACTCTATAGCAGTTTT+GGG | - | chr7.1:8544066-8544085 | MS.gene22437:intron | 30.0% |
| ! | CTGATTTTATAGGGTTTAGT+GGG | + | chr7.1:8541797-8541816 | None:intergenic | 30.0% |
| ! | GAGTATAATGAACTTTTTGG+TGG | + | chr7.1:8543641-8543660 | None:intergenic | 30.0% |
| ! | TATACTCTATAGCAGTTTTG+GGG | - | chr7.1:8544067-8544086 | MS.gene22437:intron | 30.0% |
| ! | TTCCATTCAATTAGCTTACT+TGG | + | chr7.1:8542498-8542517 | None:intergenic | 30.0% |
| !! | ACTGATTTTATAGGGTTTAG+TGG | + | chr7.1:8541798-8541817 | None:intergenic | 30.0% |
| !! | AGGGAGTATAATGAACTTTT+TGG | + | chr7.1:8543644-8543663 | None:intergenic | 30.0% |
| !! | ATTTTGGCAAATAGAACCAT+TGG | - | chr7.1:8542071-8542090 | MS.gene22437:intron | 30.0% |
| !! | TTTTGCTGCTTACTTTATCA+AGG | - | chr7.1:8543003-8543022 | MS.gene22437:intron | 30.0% |
| !!! | GTTTTGTTTAAGAATGGATG+GGG | - | chr7.1:8541601-8541620 | MS.gene22437:CDS | 30.0% |
| AAACTCTCAGATAACTCAAG+CGG | - | chr7.1:8545279-8545298 | MS.gene22437:intron | 35.0% | |
| AACGAAACAAGGAAAAAACC+AGG | + | chr7.1:8541285-8541304 | None:intergenic | 35.0% | |
| AATGTGAAAAAAGCAAAGGG+GGG | + | chr7.1:8543683-8543702 | None:intergenic | 35.0% | |
| AATTCAGCCAAAGTATGTCA+CGG | + | chr7.1:8545735-8545754 | None:intergenic | 35.0% | |
| ACACAAGTGAGTGTTTACTT+GGG | - | chr7.1:8544735-8544754 | MS.gene22437:intron | 35.0% | |
| AGAAGGAAAAAGGAGAATTC+CGG | - | chr7.1:8545308-8545327 | MS.gene22437:intron | 35.0% | |
| AGTTGTTAAGCAGATCTTGT+CGG | - | chr7.1:8545336-8545355 | MS.gene22437:intron | 35.0% | |
| ATCTGATCCATCATGATTAC+CGG | + | chr7.1:8545236-8545255 | None:intergenic | 35.0% | |
| ATGGAATGATAAGTCTGTGT+AGG | - | chr7.1:8544480-8544499 | MS.gene22437:intron | 35.0% | |
| CATCAAAGGTAAACGAAACA+AGG | + | chr7.1:8541296-8541315 | None:intergenic | 35.0% | |
| CATTGTAATTTCACCTGATG+AGG | - | chr7.1:8541254-8541273 | MS.gene22437:intron | 35.0% | |
| CTAATTTCTAAACCGTGAGT+CGG | - | chr7.1:8544650-8544669 | MS.gene22437:intron | 35.0% | |
| CTCATCAGGTGAAATTACAA+TGG | + | chr7.1:8541256-8541275 | None:intergenic | 35.0% | |
| GAGTCAGATTTAGTAAAGGT+GGG | - | chr7.1:8545166-8545185 | MS.gene22437:intron | 35.0% | |
| GAGTTTACATAGACATGGTT+TGG | + | chr7.1:8542248-8542267 | None:intergenic | 35.0% | |
| GCACTTATATTTGGCATGTA+TGG | + | chr7.1:8544436-8544455 | None:intergenic | 35.0% | |
| GCTTACTTTATCAAGGTAGT+TGG | - | chr7.1:8543010-8543029 | MS.gene22437:intron | 35.0% | |
| GTATGGTAGGACAGAATAAT+CGG | - | chr7.1:8541474-8541493 | MS.gene22437:CDS | 35.0% | |
| GTTAATTCAGGGATTTCAGT+TGG | + | chr7.1:8543250-8543269 | None:intergenic | 35.0% | |
| TAACCAGGGTAATGATATTG+AGG | + | chr7.1:8541072-8541091 | None:intergenic | 35.0% | |
| TACACAAGTGAGTGTTTACT+TGG | - | chr7.1:8544734-8544753 | MS.gene22437:intron | 35.0% | |
| TAGATTTGCACAGAATCACA+TGG | - | chr7.1:8542286-8542305 | MS.gene22437:intron | 35.0% | |
| TAGCTAGAGTTTACGACTTT+AGG | - | chr7.1:8542198-8542217 | MS.gene22437:intron | 35.0% | |
| TATCCTCAATATCATTACCC+TGG | - | chr7.1:8541066-8541085 | MS.gene22437:intron | 35.0% | |
| TATGTTAGAGAGCTTCAAAG+TGG | + | chr7.1:8542946-8542965 | None:intergenic | 35.0% | |
| TCTTGTAGACTTATTCTACC+AGG | + | chr7.1:8544398-8544417 | None:intergenic | 35.0% | |
| TGAACTTGATGAACTTGGTA+TGG | - | chr7.1:8541457-8541476 | MS.gene22437:CDS | 35.0% | |
| TGAGAGTCTACATAATTGCA+CGG | + | chr7.1:8544364-8544383 | None:intergenic | 35.0% | |
| TGAGGAGTCAGATTTAGTAA+AGG | - | chr7.1:8545162-8545181 | MS.gene22437:intron | 35.0% | |
| TGATGTTGTATTGAGTCTTG+TGG | - | chr7.1:8544591-8544610 | MS.gene22437:intron | 35.0% | |
| TGATTCTGTGCAAATCTATG+AGG | + | chr7.1:8542284-8542303 | None:intergenic | 35.0% | |
| TGGAATGATAAGTCTGTGTA+GGG | - | chr7.1:8544481-8544500 | MS.gene22437:intron | 35.0% | |
| TGGTTACCTCCAAAATAGTT+TGG | - | chr7.1:8541645-8541664 | MS.gene22437:CDS | 35.0% | |
| TTAAAGAGTTGTGGCTATCA+TGG | - | chr7.1:8543165-8543184 | MS.gene22437:intron | 35.0% | |
| TTATGACAATCACTCACACA+TGG | + | chr7.1:8544909-8544928 | None:intergenic | 35.0% | |
| TTGAGGATGATTTGAATGCA+TGG | - | chr7.1:8542309-8542328 | MS.gene22437:intron | 35.0% | |
| TTTATGTTGTTCGCGGTATT+CGG | - | chr7.1:8541684-8541703 | MS.gene22437:CDS | 35.0% | |
| ! | AACAGACTGCCAAACTATTT+TGG | + | chr7.1:8541657-8541676 | None:intergenic | 35.0% |
| ! | AAGTGACAGCTTTAGTTACA+AGG | - | chr7.1:8544762-8544781 | MS.gene22437:intron | 35.0% |
| ! | ACTCTCAAGTTTTACAATCC+TGG | - | chr7.1:8544377-8544396 | MS.gene22437:intron | 35.0% |
| ! | ATAGTTTGGCAGTCTGTTTT+AGG | - | chr7.1:8541659-8541678 | MS.gene22437:CDS | 35.0% |
| ! | CCCAGACAGCATTTAAAATA+GGG | + | chr7.1:8543272-8543291 | None:intergenic | 35.0% |
| ! | GCTATACTCTATAGCAGTTT+TGG | - | chr7.1:8544065-8544084 | MS.gene22437:intron | 35.0% |
| ! | TAGTTTGGCAGTCTGTTTTA+GGG | - | chr7.1:8541660-8541679 | MS.gene22437:CDS | 35.0% |
| ! | TCTGCTTAACAACTTTTACC+CGG | + | chr7.1:8545330-8545349 | None:intergenic | 35.0% |
| !! | ACCCTATTTTAAATGCTGTC+TGG | - | chr7.1:8543268-8543287 | MS.gene22437:intron | 35.0% |
| !! | AGCGTTTGTATTAAGTTGGT+TGG | - | chr7.1:8542654-8542673 | MS.gene22437:intron | 35.0% |
| !! | CCCTATTTTAAATGCTGTCT+GGG | - | chr7.1:8543269-8543288 | MS.gene22437:intron | 35.0% |
| !! | CCTATTTTAAATGCTGTCTG+GGG | - | chr7.1:8543270-8543289 | MS.gene22437:intron | 35.0% |
| !! | CGTTTGTATTAAGTTGGTTG+GGG | - | chr7.1:8542656-8542675 | MS.gene22437:intron | 35.0% |
| !! | GCGTTTGTATTAAGTTGGTT+GGG | - | chr7.1:8542655-8542674 | MS.gene22437:intron | 35.0% |
| !! | GTTTGTATTAAGTTGGTTGG+GGG | - | chr7.1:8542657-8542676 | MS.gene22437:intron | 35.0% |
| !! | TCAAGGAGTATTATGTAAGC+TGG | - | chr7.1:8544810-8544829 | MS.gene22437:intron | 35.0% |
| !! | TGAAAGGCTTTTGGAGATAA+AGG | - | chr7.1:8545842-8545861 | MS.gene22437:CDS | 35.0% |
| !! | TTAGGGTTTTATGTTGTTCG+CGG | - | chr7.1:8541677-8541696 | MS.gene22437:CDS | 35.0% |
| !!! | CGACGTTCATTTTTTTCCTT+TGG | - | chr7.1:8543442-8543461 | MS.gene22437:intron | 35.0% |
| AAATCGGGCATCTATTTGTC+TGG | + | chr7.1:8545809-8545828 | None:intergenic | 40.0% | |
| AAATTCAGTGGAGAGTGATG+TGG | - | chr7.1:8545402-8545421 | MS.gene22437:intron | 40.0% | |
| AACTCTTTAATGTGCATCGC+TGG | + | chr7.1:8543155-8543174 | None:intergenic | 40.0% | |
| AATATACCATATGTCGGCAG+GGG | + | chr7.1:8545492-8545511 | None:intergenic | 40.0% | |
| AATTGATGAGGTGCGATTTC+GGG | + | chr7.1:8541003-8541022 | None:intergenic | 40.0% | |
| AGTGAAAGGCGAATTAGGAA+GGG | - | chr7.1:8542686-8542705 | MS.gene22437:intron | 40.0% | |
| ATCTCCAAAAGCCTTTCAAC+TGG | + | chr7.1:8545840-8545859 | None:intergenic | 40.0% | |
| ATGGGTAATATCTCAAGCAC+CGG | - | chr7.1:8540901-8540920 | MS.gene22437:CDS | 40.0% | |
| ATTGAGGATAATGCATGGGT+GGG | + | chr7.1:8541056-8541075 | None:intergenic | 40.0% | |
| CACAAGTGAGTGTTTACTTG+GGG | - | chr7.1:8544736-8544755 | MS.gene22437:intron | 40.0% | |
| CATTATCCTCCTTCGCATAT+AGG | + | chr7.1:8544573-8544592 | None:intergenic | 40.0% | |
| CGACTCACGGTTTAGAAATT+AGG | + | chr7.1:8544652-8544671 | None:intergenic | 40.0% | |
| CGATGCACATTAAAGAGTTG+TGG | - | chr7.1:8543156-8543175 | MS.gene22437:intron | 40.0% | |
| CTGCAGGAGATATATGGTAT+TGG | - | chr7.1:8545379-8545398 | MS.gene22437:intron | 40.0% | |
| CTTGATGAACTTGGTATGGT+AGG | - | chr7.1:8541461-8541480 | MS.gene22437:CDS | 40.0% | |
| GAAAACTAACCTCCCAGATA+CGG | + | chr7.1:8541322-8541341 | None:intergenic | 40.0% | |
| GAAGGAAAAAGGAGAATTCC+GGG | - | chr7.1:8545309-8545328 | MS.gene22437:intron | 40.0% | |
| GAATATACCATATGTCGGCA+GGG | + | chr7.1:8545493-8545512 | None:intergenic | 40.0% | |
| GAATTGATGAGGTGCGATTT+CGG | + | chr7.1:8541004-8541023 | None:intergenic | 40.0% | |
| GATGTGGATGACAATGAACA+AGG | - | chr7.1:8545418-8545437 | MS.gene22437:intron | 40.0% | |
| GCTTGAGTTATCTGAGAGTT+TGG | + | chr7.1:8545280-8545299 | None:intergenic | 40.0% | |
| GCTTTCTGATGCTCAACAAA+AGG | + | chr7.1:8541195-8541214 | None:intergenic | 40.0% | |
| GGAGTCAGATTTAGTAAAGG+TGG | - | chr7.1:8545165-8545184 | MS.gene22437:intron | 40.0% | |
| GGCATGTTAAAAGGAGAAAG+TGG | - | chr7.1:8541625-8541644 | MS.gene22437:CDS | 40.0% | |
| GGCCAAGTAAGCTAATTGAA+TGG | - | chr7.1:8542493-8542512 | MS.gene22437:intron | 40.0% | |
| GTAGCTAAAGGGAGAGAAAA+AGG | - | chr7.1:8542607-8542626 | MS.gene22437:intron | 40.0% | |
| GTGAAAGGTGACTACTAAAG+AGG | - | chr7.1:8542556-8542575 | MS.gene22437:intron | 40.0% | |
| TAGCACGATAGTCTTTCCAA+TGG | + | chr7.1:8542090-8542109 | None:intergenic | 40.0% | |
| TATGAGCTGCAGGAGATATA+TGG | - | chr7.1:8545373-8545392 | MS.gene22437:intron | 40.0% | |
| TATTGAGGATAATGCATGGG+TGG | + | chr7.1:8541057-8541076 | None:intergenic | 40.0% | |
| TCAACTGGTTGTCTGCAAAT+CGG | + | chr7.1:8545825-8545844 | None:intergenic | 40.0% | |
| TCCTTCGTGCATAGAAAGAA+AGG | + | chr7.1:8543499-8543518 | None:intergenic | 40.0% | |
| TCCTTTCTTTCTATGCACGA+AGG | - | chr7.1:8543495-8543514 | MS.gene22437:intron | 40.0% | |
| TGAAAGTCATCCACAAGTTC+TGG | - | chr7.1:8544173-8544192 | MS.gene22437:intron | 40.0% | |
| TGAATATACCATATGTCGGC+AGG | + | chr7.1:8545494-8545513 | None:intergenic | 40.0% | |
| TGGGTGTTTAGATATAGGGA+CGG | - | chr7.1:8543913-8543932 | MS.gene22437:intron | 40.0% | |
| TGTTTAGATATAGGGACGGA+GGG | - | chr7.1:8543917-8543936 | MS.gene22437:intron | 40.0% | |
| TTAGGATAAGATCCGACTCA+CGG | + | chr7.1:8544665-8544684 | None:intergenic | 40.0% | |
| TTGTTTAAGAATGGATGGGG+AGG | - | chr7.1:8541604-8541623 | MS.gene22437:CDS | 40.0% | |
| TTTAGTAAAGGTGGGTGACA+TGG | - | chr7.1:8545174-8545193 | MS.gene22437:intron | 40.0% | |
| TTTGCAGACAACCAGTTGAA+AGG | - | chr7.1:8545826-8545845 | MS.gene22437:CDS | 40.0% | |
| ! | AAACCAGGATTTTCCTCATC+AGG | + | chr7.1:8541270-8541289 | None:intergenic | 40.0% |
| ! | AAATGCTGTCTGGGGTATAT+TGG | - | chr7.1:8543278-8543297 | MS.gene22437:intron | 40.0% |
| ! | ACAACCAGTTGAAAGGCTTT+TGG | - | chr7.1:8545833-8545852 | MS.gene22437:CDS | 40.0% |
| ! | CAGGTTGAACTTGATGAACT+TGG | - | chr7.1:8541452-8541471 | MS.gene22437:CDS | 40.0% |
| ! | CCCCAGACAGCATTTAAAAT+AGG | + | chr7.1:8543273-8543292 | None:intergenic | 40.0% |
| ! | GGACTGTCTAAGCAAGTTTT+TGG | - | chr7.1:8541829-8541848 | MS.gene22437:intron | 40.0% |
| ! | TCCATATGAGGATGATGATG+AGG | + | chr7.1:8541117-8541136 | None:intergenic | 40.0% |
| ! | TGATGATGAGGCATAGGTAT+TGG | + | chr7.1:8541105-8541124 | None:intergenic | 40.0% |
| ! | TTTTTGCAGTGCATGTGTAG+TGG | - | chr7.1:8545762-8545781 | MS.gene22437:CDS | 40.0% |
| !! | AGACTGCCAAACTATTTTGG+AGG | + | chr7.1:8541654-8541673 | None:intergenic | 40.0% |
| !! | AGGCTTTTGGAGATAAAGGT+AGG | - | chr7.1:8545846-8545865 | MS.gene22437:CDS | 40.0% |
| !! | ATTGGTGGTGGATAATAACC+AGG | + | chr7.1:8541087-8541106 | None:intergenic | 40.0% |
| !! | CACAAATGCTTCTAAAGTCC+CGG | - | chr7.1:8544541-8544560 | MS.gene22437:intron | 40.0% |
| !! | CTTTGCAAACACGTTTTAGG+AGG | - | chr7.1:8543339-8543358 | MS.gene22437:intron | 40.0% |
| !! | GGCTTTTGGAGATAAAGGTA+GGG | - | chr7.1:8545847-8545866 | MS.gene22437:CDS | 40.0% |
| !! | TTGGTGGTGGATAATAACCA+GGG | + | chr7.1:8541086-8541105 | None:intergenic | 40.0% |
| AAAGGCGAATTAGGAAGGGA+TGG | - | chr7.1:8542690-8542709 | MS.gene22437:intron | 45.0% | |
| AACTCAAGCGGTGTTTGAGA+AGG | - | chr7.1:8545291-8545310 | MS.gene22437:intron | 45.0% | |
| AAGAGGTGGAGAGTAAGAAG+TGG | - | chr7.1:8542579-8542598 | MS.gene22437:intron | 45.0% | |
| AAGCAGATCTTGTCGGTGAA+TGG | - | chr7.1:8545343-8545362 | MS.gene22437:intron | 45.0% | |
| AAGGCGAATTAGGAAGGGAT+GGG | - | chr7.1:8542691-8542710 | MS.gene22437:intron | 45.0% | |
| AAGTGGAGAGGGTAGCTAAA+GGG | - | chr7.1:8542596-8542615 | MS.gene22437:intron | 45.0% | |
| AGCAAAGGGGGGTTACATTA+AGG | + | chr7.1:8543672-8543691 | None:intergenic | 45.0% | |
| AGTGAGATTGCGTGTGAGTT+GGG | - | chr7.1:8542780-8542799 | MS.gene22437:intron | 45.0% | |
| ATAGTTTCGCAGGCGCTATT+AGG | - | chr7.1:8543220-8543239 | MS.gene22437:intron | 45.0% | |
| ATCCTCATATGGATCCTGCT+TGG | - | chr7.1:8541124-8541143 | MS.gene22437:intron | 45.0% | |
| ATTCAAGTGCTACAACTGCG+AGG | + | chr7.1:8544520-8544539 | None:intergenic | 45.0% | |
| ATTCAGCCAACCAGAACTTG+TGG | + | chr7.1:8544186-8544205 | None:intergenic | 45.0% | |
| CAACTGGTTGTCTGCAAATC+GGG | + | chr7.1:8545824-8545843 | None:intergenic | 45.0% | |
| CAGAAGTTTAGACAGCAAGC+TGG | - | chr7.1:8545115-8545134 | MS.gene22437:intron | 45.0% | |
| CAGTGAAAGGCGAATTAGGA+AGG | - | chr7.1:8542685-8542704 | MS.gene22437:intron | 45.0% | |
| CATGAACCTATATGCGAAGG+AGG | - | chr7.1:8544564-8544583 | MS.gene22437:intron | 45.0% | |
| CATGATTTCGCTGCTATGTG+CGG | + | chr7.1:8543191-8543210 | None:intergenic | 45.0% | |
| CCAGGGTAAACGAATTGATG+AGG | + | chr7.1:8541015-8541034 | None:intergenic | 45.0% | |
| CCTCATCAATTCGTTTACCC+TGG | - | chr7.1:8541012-8541031 | MS.gene22437:intron | 45.0% | |
| CTCTTTGCTCTCCCATATCA+AGG | - | chr7.1:8544793-8544812 | MS.gene22437:intron | 45.0% | |
| CTTCGCATATAGGTTCATGC+CGG | + | chr7.1:8544563-8544582 | None:intergenic | 45.0% | |
| GACTACTAAAGAGGAAGAGG+TGG | - | chr7.1:8542565-8542584 | MS.gene22437:intron | 45.0% | |
| GCAAAGGGGGGTTACATTAA+GGG | + | chr7.1:8543671-8543690 | None:intergenic | 45.0% | |
| GCATCATCCGGTAATCATGA+TGG | - | chr7.1:8545226-8545245 | MS.gene22437:intron | 45.0% | |
| GCCTCATCATCATCCTCATA+TGG | - | chr7.1:8541113-8541132 | MS.gene22437:intron | 45.0% | |
| GCGGTGTTTGAGAAGGAAAA+AGG | - | chr7.1:8545298-8545317 | MS.gene22437:intron | 45.0% | |
| GGAAAGCAACAGAACAGAGA+AGG | + | chr7.1:8543478-8543497 | None:intergenic | 45.0% | |
| GGTGACTACTAAAGAGGAAG+AGG | - | chr7.1:8542562-8542581 | MS.gene22437:intron | 45.0% | |
| GTACAATTCCAGCAAGGTCT+TGG | - | chr7.1:8545091-8545110 | MS.gene22437:intron | 45.0% | |
| GTGACTGTACAATTCCAGCA+AGG | - | chr7.1:8545085-8545104 | MS.gene22437:intron | 45.0% | |
| GTGTTTAGATATAGGGACGG+AGG | - | chr7.1:8543916-8543935 | MS.gene22437:intron | 45.0% | |
| GTTAATCTCATATAGCGGCG+TGG | + | chr7.1:8544102-8544121 | None:intergenic | 45.0% | |
| GTTGCAGTGAAAGGCGAATT+AGG | - | chr7.1:8542681-8542700 | MS.gene22437:intron | 45.0% | |
| TACAGTCACAGGTGCAAGAT+GGG | + | chr7.1:8545074-8545093 | None:intergenic | 45.0% | |
| TAGTGAGATTGCGTGTGAGT+TGG | - | chr7.1:8542779-8542798 | MS.gene22437:intron | 45.0% | |
| TAGTTTCGCAGGCGCTATTA+GGG | - | chr7.1:8543221-8543240 | MS.gene22437:intron | 45.0% | |
| TCACCTGATGAGGAAAATCC+TGG | - | chr7.1:8541264-8541283 | MS.gene22437:intron | 45.0% | |
| TCCTCATATGGATCCTGCTT+GGG | - | chr7.1:8541125-8541144 | MS.gene22437:intron | 45.0% | |
| TCGTAGCAACAAACAGCAGA+AGG | + | chr7.1:8543425-8543444 | None:intergenic | 45.0% | |
| TCTTGTCGGTGAATGGAATG+CGG | - | chr7.1:8545350-8545369 | MS.gene22437:intron | 45.0% | |
| TGCACAGAATCACATGGTTG+AGG | - | chr7.1:8542292-8542311 | MS.gene22437:intron | 45.0% | |
| TGCCATATCTCTAGACGAAG+TGG | - | chr7.1:8541984-8542003 | MS.gene22437:intron | 45.0% | |
| TGCTGGAATTGTACAGTCAC+AGG | + | chr7.1:8545085-8545104 | None:intergenic | 45.0% | |
| TGGAGAGTAAGAAGTGGAGA+GGG | - | chr7.1:8542585-8542604 | MS.gene22437:intron | 45.0% | |
| TGTTTACCCTCTAGCAGTGA+AGG | - | chr7.1:8545198-8545217 | MS.gene22437:intron | 45.0% | |
| TTCGCATATAGGTTCATGCC+GGG | + | chr7.1:8544562-8544581 | None:intergenic | 45.0% | |
| TTTAGACAGCAAGCTGGAAC+TGG | - | chr7.1:8545121-8545140 | MS.gene22437:intron | 45.0% | |
| ! | AGGATGCTGCTCTGTTTTGT+TGG | - | chr7.1:8543515-8543534 | MS.gene22437:intron | 45.0% |
| ! | AGTCATCCACAAGTTCTGGT+TGG | - | chr7.1:8544177-8544196 | MS.gene22437:intron | 45.0% |
| ! | TGAGGATGATGATGAGGCAT+AGG | + | chr7.1:8541111-8541130 | None:intergenic | 45.0% |
| ! | TGATGCTCAACAAAAGGTGC+AGG | + | chr7.1:8541189-8541208 | None:intergenic | 45.0% |
| !! | ATTTCGGGTTGTGGTGTTAC+CGG | + | chr7.1:8540988-8541007 | None:intergenic | 45.0% |
| !! | CATGTGTAGTGGATGTGCAA+AGG | - | chr7.1:8545773-8545792 | MS.gene22437:CDS | 45.0% |
| !! | CGGGACTTTAGAAGCATTTG+TGG | + | chr7.1:8544543-8544562 | None:intergenic | 45.0% |
| !! | GATAATGCATGGGTGGGTTA+GGG | + | chr7.1:8541050-8541069 | None:intergenic | 45.0% |
| !! | TGATGAGGCATAGGTATTGG+TGG | + | chr7.1:8541102-8541121 | None:intergenic | 45.0% |
| !!! | GCAAGTTTTTGGAACTGCAC+CGG | - | chr7.1:8541840-8541859 | MS.gene22437:intron | 45.0% |
| ACCCAAGCAGGATCCATATG+AGG | + | chr7.1:8541129-8541148 | None:intergenic | 50.0% | |
| ACCTTTGATGCTGCCGTATC+TGG | - | chr7.1:8541306-8541325 | MS.gene22437:CDS | 50.0% | |
| ACTTCTGTCCAAGACCTTGC+TGG | + | chr7.1:8545102-8545121 | None:intergenic | 50.0% | |
| AGAAGGACACTTCACGCCAA+AGG | + | chr7.1:8543461-8543480 | None:intergenic | 50.0% | |
| AGGCGAATTAGGAAGGGATG+GGG | - | chr7.1:8542692-8542711 | MS.gene22437:intron | 50.0% | |
| AGGGGGGTTACATTAAGGGA+CGG | + | chr7.1:8543667-8543686 | None:intergenic | 50.0% | |
| ATGTTGTTCGCGGTATTCGG+AGG | - | chr7.1:8541687-8541706 | MS.gene22437:CDS | 50.0% | |
| CATCTGCCTTCACTGCTAGA+GGG | + | chr7.1:8545207-8545226 | None:intergenic | 50.0% | |
| CCTTTGATGCTGCCGTATCT+GGG | - | chr7.1:8541307-8541326 | MS.gene22437:CDS | 50.0% | |
| CGCTCATACTGACGTGCATA+TGG | - | chr7.1:8542472-8542491 | MS.gene22437:intron | 50.0% | |
| CGGCATGAACCTATATGCGA+AGG | - | chr7.1:8544561-8544580 | MS.gene22437:intron | 50.0% | |
| CGGCTGATTGGAGAAAGAAG+GGG | - | chr7.1:8542722-8542741 | MS.gene22437:intron | 50.0% | |
| GAAGTGGAGAGGGTAGCTAA+AGG | - | chr7.1:8542595-8542614 | MS.gene22437:intron | 50.0% | |
| GCCAAAGTATGTCACGGACT+CGG | + | chr7.1:8545729-8545748 | None:intergenic | 50.0% | |
| GCCTGCGAAACTATCGAACA+GGG | + | chr7.1:8543214-8543233 | None:intergenic | 50.0% | |
| GCGGCTGATTGGAGAAAGAA+GGG | - | chr7.1:8542721-8542740 | MS.gene22437:intron | 50.0% | |
| GGAGATAAAGGTAGGGACTG+AGG | - | chr7.1:8545854-8545873 | MS.gene22437:CDS | 50.0% | |
| GGCCACTTCGTCTAGAGATA+TGG | + | chr7.1:8541989-8542008 | None:intergenic | 50.0% | |
| GGGTTACATTAAGGGACGGA+GGG | + | chr7.1:8543663-8543682 | None:intergenic | 50.0% | |
| GTACAGTCACAGGTGCAAGA+TGG | + | chr7.1:8545075-8545094 | None:intergenic | 50.0% | |
| GTGAAGGCAGATGCATCATC+CGG | - | chr7.1:8545214-8545233 | MS.gene22437:intron | 50.0% | |
| GTGGAGAGTAAGAAGTGGAG+AGG | - | chr7.1:8542584-8542603 | MS.gene22437:intron | 50.0% | |
| GTTTCTCGGTACTACCCTTG+TGG | - | chr7.1:8541147-8541166 | MS.gene22437:intron | 50.0% | |
| TCCGAGTCCGTGACATACTT+TGG | - | chr7.1:8545725-8545744 | MS.gene22437:CDS | 50.0% | |
| TCCTTGACATGTGTCAACGC+CGG | + | chr7.1:8541862-8541881 | None:intergenic | 50.0% | |
| TGGATCCTGCTTGGGTTTCT+CGG | - | chr7.1:8541133-8541152 | MS.gene22437:intron | 50.0% | |
| TGTCAATCGCGCTGCTATAG+CGG | - | chr7.1:8543106-8543125 | MS.gene22437:intron | 50.0% | |
| ! | GGATAATGCATGGGTGGGTT+AGG | + | chr7.1:8541051-8541070 | None:intergenic | 50.0% |
| ! | GGATGGGGAGGCATGTTAAA+AGG | - | chr7.1:8541616-8541635 | MS.gene22437:CDS | 50.0% |
| ! | TAGTACCGAGAAACCCAAGC+AGG | + | chr7.1:8541141-8541160 | None:intergenic | 50.0% |
| !! | AGGTGCAAGATGGGTTACCT+TGG | + | chr7.1:8545065-8545084 | None:intergenic | 50.0% |
| !! | AGGTGCAGGTTGATTCACCA+CGG | + | chr7.1:8541175-8541194 | None:intergenic | 50.0% |
| !! | GCAAGATGGGTTACCTTGGT+CGG | + | chr7.1:8545061-8545080 | None:intergenic | 50.0% |
| !! | GGTAATATCTCAAGCACCGG+CGG | - | chr7.1:8540904-8540923 | MS.gene22437:CDS | 50.0% |
| !! | TGAGGCATAGGTATTGGTGG+TGG | + | chr7.1:8541099-8541118 | None:intergenic | 50.0% |
| ACTGAGCTAGCTACTTGGCG+CGG | - | chr7.1:8541917-8541936 | MS.gene22437:intron | 55.0% | |
| AGAAGGATGTGTCGCGGTCA+AGG | + | chr7.1:8543384-8543403 | None:intergenic | 55.0% | |
| AGCGTCTCACAGGACCAAGA+AGG | + | chr7.1:8543401-8543420 | None:intergenic | 55.0% | |
| CCCAGATACGGCAGCATCAA+AGG | + | chr7.1:8541310-8541329 | None:intergenic | 55.0% | |
| CGCACACTGAGCTAGCTACT+TGG | - | chr7.1:8541912-8541931 | MS.gene22437:intron | 55.0% | |
| CGCCTGCGAAACTATCGAAC+AGG | + | chr7.1:8543215-8543234 | None:intergenic | 55.0% | |
| GATTCACCACGGGTCCACAA+GGG | + | chr7.1:8541164-8541183 | None:intergenic | 55.0% | |
| GCATCTGCCTTCACTGCTAG+AGG | + | chr7.1:8545208-8545227 | None:intergenic | 55.0% | |
| GCCCTGTTCGATAGTTTCGC+AGG | - | chr7.1:8543210-8543229 | MS.gene22437:intron | 55.0% | |
| GGACCAAGAAGGATGTGTCG+CGG | + | chr7.1:8543390-8543409 | None:intergenic | 55.0% | |
| GGCGAATTAGGAAGGGATGG+GGG | - | chr7.1:8542693-8542712 | MS.gene22437:intron | 55.0% | |
| GGCGGCTGATTGGAGAAAGA+AGG | - | chr7.1:8542720-8542739 | MS.gene22437:intron | 55.0% | |
| GGGGTTACATTAAGGGACGG+AGG | + | chr7.1:8543664-8543683 | None:intergenic | 55.0% | |
| GGGTGAACAATTGTGTCGCG+AGG | + | chr7.1:8545472-8545491 | None:intergenic | 55.0% | |
| GTTGGGGGAGTTGCAGTGAA+AGG | - | chr7.1:8542672-8542691 | MS.gene22437:intron | 55.0% | |
| TGACCGCGACACATCCTTCT+TGG | - | chr7.1:8543384-8543403 | MS.gene22437:intron | 55.0% | |
| TGATTCACCACGGGTCCACA+AGG | + | chr7.1:8541165-8541184 | None:intergenic | 55.0% | |
| TGGAATGCGGTATGAGCTGC+AGG | - | chr7.1:8545363-8545382 | MS.gene22437:intron | 55.0% | |
| TGTTCACCCCTGCCGACATA+TGG | - | chr7.1:8545483-8545502 | MS.gene22437:CDS | 55.0% | |
| TTAGGAAGGGATGGGGGAGA+TGG | - | chr7.1:8542699-8542718 | MS.gene22437:intron | 55.0% | |
| TTGATGCTGCCGTATCTGGG+AGG | - | chr7.1:8541310-8541329 | MS.gene22437:CDS | 55.0% | |
| TTGTTCGCGGTATTCGGAGG+TGG | - | chr7.1:8541690-8541709 | MS.gene22437:CDS | 55.0% | |
| !! | ACCGGCGTTGACACATGTCA+AGG | - | chr7.1:8541858-8541877 | MS.gene22437:intron | 55.0% |
| !! | AGCAGAAGGAAGCGTCTCAC+AGG | + | chr7.1:8543411-8543430 | None:intergenic | 55.0% |
| !! | CTGCTATAGCGGACAATCGC+GGG | - | chr7.1:8543117-8543136 | MS.gene22437:intron | 55.0% |
| !! | GCTGCTATAGCGGACAATCG+CGG | - | chr7.1:8543116-8543135 | MS.gene22437:intron | 55.0% |
| !! | GGTGCAGGTTGATTCACCAC+GGG | + | chr7.1:8541174-8541193 | None:intergenic | 55.0% |
| !! | TGAGGTGCGATTTCGGGTTG+TGG | + | chr7.1:8540997-8541016 | None:intergenic | 55.0% |
| !! | TGCATGGGTGGGTTAGGGTA+CGG | + | chr7.1:8541045-8541064 | None:intergenic | 55.0% |
| CTGCATCCTCACACCGACCA+AGG | - | chr7.1:8545045-8545064 | MS.gene22437:intron | 60.0% | |
| GGGTTACCTTGGTCGGTGTG+AGG | + | chr7.1:8545054-8545073 | None:intergenic | 60.0% | |
| GTACTACCCTTGTGGACCCG+TGG | - | chr7.1:8541155-8541174 | MS.gene22437:intron | 60.0% | |
| ! | GCGTGTGAGTTGGGCCGAAA+AGG | - | chr7.1:8542789-8542808 | MS.gene22437:intron | 60.0% |
| !! | GGTTGTGGTGTTACCGGAGG+TGG | + | chr7.1:8540982-8541001 | None:intergenic | 60.0% |
| !! | TCGGGTTGTGGTGTTACCGG+AGG | + | chr7.1:8540985-8541004 | None:intergenic | 60.0% |
| !! | TGTGGTGTTACCGGAGGTGG+TGG | + | chr7.1:8540979-8540998 | None:intergenic | 60.0% |
| !! | TTACCGGAGGTGGTGGTGGT+GGG | + | chr7.1:8540972-8540991 | None:intergenic | 60.0% |
| GGAAGGGATGGGGGAGATGG+CGG | - | chr7.1:8542702-8542721 | MS.gene22437:intron | 65.0% | |
| TAGGGTACGGTGCGGCACCA+GGG | + | chr7.1:8541032-8541051 | None:intergenic | 65.0% | |
| TCACCCACCACCACCACCTC+CGG | - | chr7.1:8540966-8540985 | MS.gene22437:CDS | 65.0% | |
| TCGACGACGGTTGTGTCCGC+CGG | + | chr7.1:8540923-8540942 | None:intergenic | 65.0% | |
| TGGGTGAGTCCGTCGGGAAG+CGG | + | chr7.1:8540953-8540972 | None:intergenic | 65.0% | |
| TTAGGGTACGGTGCGGCACC+AGG | + | chr7.1:8541033-8541052 | None:intergenic | 65.0% | |
| ! | AAGCGGTGGCGTGTCGACGA+CGG | + | chr7.1:8540936-8540955 | None:intergenic | 65.0% |
| ! | GGTGTTACCGGAGGTGGTGG+TGG | + | chr7.1:8540976-8540995 | None:intergenic | 65.0% |
| ! | TGGGGGAGATGGCGGCTGAT+TGG | - | chr7.1:8542710-8542729 | MS.gene22437:intron | 65.0% |
| !! | GGGTGGGTTAGGGTACGGTG+CGG | + | chr7.1:8541040-8541059 | None:intergenic | 65.0% |
| !! | GTGGTGGTGGGTGAGTCCGT+CGG | + | chr7.1:8540960-8540979 | None:intergenic | 65.0% |
| !! | GTTACCGGAGGTGGTGGTGG+TGG | + | chr7.1:8540973-8540992 | None:intergenic | 65.0% |
| !! | TGGTGGTGGGTGAGTCCGTC+GGG | + | chr7.1:8540959-8540978 | None:intergenic | 65.0% |
| GACACGCCACCGCTTCCCGA+CGG | - | chr7.1:8540941-8540960 | MS.gene22437:CDS | 70.0% | |
| GTGAGTCCGTCGGGAAGCGG+TGG | + | chr7.1:8540950-8540969 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 8540901 | 8545881 | 8540901 | ID=MS.gene22437 |
| chr7.1 | mRNA | 8540901 | 8545881 | 8540901 | ID=MS.gene22437.t1;Parent=MS.gene22437 |
| chr7.1 | exon | 8545451 | 8545881 | 8545451 | ID=MS.gene22437.t1.exon1;Parent=MS.gene22437.t1 |
| chr7.1 | CDS | 8545451 | 8545881 | 8545451 | ID=cds.MS.gene22437.t1;Parent=MS.gene22437.t1 |
| chr7.1 | exon | 8541278 | 8541773 | 8541278 | ID=MS.gene22437.t1.exon2;Parent=MS.gene22437.t1 |
| chr7.1 | CDS | 8541278 | 8541773 | 8541278 | ID=cds.MS.gene22437.t1;Parent=MS.gene22437.t1 |
| chr7.1 | exon | 8540901 | 8541011 | 8540901 | ID=MS.gene22437.t1.exon3;Parent=MS.gene22437.t1 |
| chr7.1 | CDS | 8540901 | 8541011 | 8540901 | ID=cds.MS.gene22437.t1;Parent=MS.gene22437.t1 |
| Gene Sequence |
| Protein sequence |
