Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22755.t1 | XP_003626618.2 | 92.6 | 744 | 44 | 2 | 36 | 768 | 11 | 754 | 0.00E+00 | 1313.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22755.t1 | Q6R0H1 | 40.2 | 751 | 304 | 23 | 41 | 767 | 15 | 644 | 1.8e-102 | 375.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22755.t1 | G7L558 | 92.6 | 744 | 44 | 2 | 36 | 768 | 11 | 754 | 0.0e+00 | 1313.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene22755.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050702 | MS.gene22755 | 0.988647 | 7.57E-175 | -1.69E-46 |
| MS.gene052224 | MS.gene22755 | 0.801183 | 1.02E-48 | -1.69E-46 |
| MS.gene053401 | MS.gene22755 | -0.801793 | 7.62E-49 | -1.69E-46 |
| MS.gene058551 | MS.gene22755 | -0.846887 | 1.64E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22755.t1 | MTR_7g118330 | 97.177 | 744 | 10 | 2 | 36 | 768 | 11 | 754 | 0.0 | 1495 |
| MS.gene22755.t1 | MTR_3g064500 | 64.815 | 108 | 33 | 3 | 34 | 138 | 40 | 145 | 2.30e-30 | 123 |
| MS.gene22755.t1 | MTR_5g076960 | 72.043 | 93 | 24 | 1 | 41 | 133 | 34 | 124 | 7.88e-30 | 123 |
| MS.gene22755.t1 | MTR_1g067000 | 51.961 | 102 | 37 | 2 | 40 | 139 | 37 | 128 | 4.85e-29 | 118 |
| MS.gene22755.t1 | MTR_8g028655 | 53.000 | 100 | 37 | 1 | 41 | 140 | 55 | 144 | 1.07e-28 | 118 |
| MS.gene22755.t1 | MTR_6g477860 | 71.579 | 95 | 25 | 1 | 40 | 134 | 47 | 139 | 1.47e-28 | 120 |
| MS.gene22755.t1 | MTR_0123s0070 | 53.465 | 101 | 37 | 2 | 41 | 141 | 41 | 131 | 1.56e-28 | 116 |
| MS.gene22755.t1 | MTR_0123s0070 | 45.385 | 130 | 53 | 3 | 20 | 141 | 12 | 131 | 1.83e-28 | 116 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22755.t1 | AT1G01060 | 44.297 | 754 | 268 | 23 | 41 | 767 | 15 | 643 | 6.16e-122 | 380 |
| MS.gene22755.t1 | AT1G01060 | 44.371 | 755 | 267 | 24 | 41 | 767 | 15 | 644 | 9.20e-122 | 380 |
| MS.gene22755.t1 | AT1G01060 | 44.371 | 755 | 267 | 24 | 41 | 767 | 15 | 644 | 9.20e-122 | 380 |
| MS.gene22755.t1 | AT1G01060 | 44.371 | 755 | 267 | 24 | 41 | 767 | 15 | 644 | 9.20e-122 | 380 |
| MS.gene22755.t1 | AT1G01060 | 44.371 | 755 | 267 | 24 | 41 | 767 | 15 | 644 | 9.20e-122 | 380 |
| MS.gene22755.t1 | AT1G01060 | 44.371 | 755 | 267 | 24 | 41 | 767 | 15 | 644 | 9.20e-122 | 380 |
| MS.gene22755.t1 | AT2G46830 | 37.219 | 755 | 287 | 31 | 36 | 763 | 9 | 603 | 5.93e-82 | 274 |
| MS.gene22755.t1 | AT1G01060 | 40.113 | 708 | 271 | 24 | 88 | 767 | 60 | 642 | 1.02e-77 | 263 |
| MS.gene22755.t1 | AT1G01060 | 40.113 | 708 | 271 | 24 | 88 | 767 | 60 | 642 | 1.02e-77 | 263 |
| MS.gene22755.t1 | AT2G46830 | 39.225 | 413 | 183 | 18 | 370 | 763 | 158 | 521 | 1.67e-44 | 168 |
| MS.gene22755.t1 | AT2G46830 | 39.225 | 413 | 183 | 18 | 370 | 763 | 158 | 521 | 1.67e-44 | 168 |
| MS.gene22755.t1 | AT5G17300 | 68.932 | 103 | 29 | 2 | 32 | 133 | 36 | 136 | 4.67e-32 | 129 |
| MS.gene22755.t1 | AT5G37260 | 66.000 | 100 | 28 | 1 | 37 | 136 | 23 | 116 | 8.72e-32 | 125 |
| MS.gene22755.t1 | AT1G18330 | 56.489 | 131 | 50 | 2 | 36 | 161 | 36 | 164 | 1.85e-31 | 126 |
| MS.gene22755.t1 | AT3G10113 | 56.489 | 131 | 50 | 2 | 36 | 161 | 51 | 179 | 2.68e-31 | 125 |
| MS.gene22755.t1 | AT1G18330 | 56.489 | 131 | 50 | 2 | 36 | 161 | 62 | 190 | 5.81e-31 | 125 |
| MS.gene22755.t1 | AT3G09600 | 49.091 | 110 | 44 | 2 | 24 | 133 | 19 | 116 | 6.57e-29 | 117 |
| MS.gene22755.t1 | AT3G09600 | 49.091 | 110 | 44 | 2 | 24 | 133 | 19 | 116 | 6.57e-29 | 117 |
| MS.gene22755.t1 | AT3G09600 | 49.091 | 110 | 44 | 2 | 24 | 133 | 19 | 116 | 6.92e-29 | 117 |
| MS.gene22755.t1 | AT3G09600 | 49.091 | 110 | 44 | 2 | 24 | 133 | 19 | 116 | 6.92e-29 | 117 |
| MS.gene22755.t1 | AT3G09600 | 53.191 | 94 | 34 | 1 | 40 | 133 | 33 | 116 | 7.16e-29 | 117 |
| MS.gene22755.t1 | AT5G02840 | 52.128 | 94 | 35 | 1 | 40 | 133 | 38 | 121 | 1.44e-27 | 113 |
| MS.gene22755.t1 | AT5G52660 | 55.789 | 95 | 32 | 2 | 41 | 135 | 63 | 147 | 1.73e-27 | 114 |
| MS.gene22755.t1 | AT5G02840 | 52.128 | 94 | 35 | 1 | 40 | 133 | 38 | 121 | 1.76e-27 | 113 |
| MS.gene22755.t1 | AT5G02840 | 52.128 | 94 | 35 | 1 | 40 | 133 | 38 | 121 | 1.76e-27 | 113 |
| MS.gene22755.t1 | AT5G52660 | 55.789 | 95 | 32 | 2 | 41 | 135 | 63 | 147 | 1.84e-27 | 114 |
| MS.gene22755.t1 | AT5G02840 | 52.128 | 94 | 35 | 1 | 40 | 133 | 38 | 121 | 1.87e-27 | 113 |
| MS.gene22755.t1 | AT4G01280 | 54.206 | 107 | 37 | 3 | 41 | 145 | 50 | 146 | 2.37e-27 | 113 |
| MS.gene22755.t1 | AT5G02840 | 52.128 | 94 | 35 | 1 | 40 | 133 | 38 | 121 | 2.45e-27 | 113 |
| MS.gene22755.t1 | AT4G01280 | 54.206 | 107 | 37 | 3 | 41 | 145 | 50 | 146 | 2.61e-27 | 113 |
| MS.gene22755.t1 | AT1G01520 | 38.202 | 178 | 75 | 6 | 40 | 193 | 51 | 217 | 1.44e-26 | 110 |
| MS.gene22755.t1 | AT1G01520 | 38.202 | 178 | 75 | 6 | 40 | 193 | 51 | 217 | 1.44e-26 | 110 |
| MS.gene22755.t1 | AT1G01520 | 38.202 | 178 | 75 | 6 | 40 | 193 | 51 | 217 | 1.65e-26 | 110 |
| MS.gene22755.t1 | AT1G01520 | 38.202 | 178 | 75 | 6 | 40 | 193 | 51 | 217 | 1.78e-26 | 110 |
| MS.gene22755.t1 | AT3G09600 | 45.455 | 66 | 26 | 1 | 68 | 133 | 5 | 60 | 1.38e-13 | 71.6 |
| MS.gene22755.t1 | AT3G09600 | 45.455 | 66 | 26 | 1 | 68 | 133 | 5 | 60 | 1.38e-13 | 71.6 |
| MS.gene22755.t1 | AT3G09600 | 45.455 | 66 | 26 | 1 | 68 | 133 | 5 | 60 | 1.40e-13 | 71.2 |
| MS.gene22755.t1 | AT3G09600 | 45.455 | 66 | 26 | 1 | 68 | 133 | 5 | 60 | 1.40e-13 | 71.2 |
Find 181 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAGGGACGACTTGCCTTTC+GGG | 0.205941 | 7.3:-321265 | MS.gene22755:intron |
| TTCTCGGATTGAACCGATTT+CGG | 0.267063 | 7.3:+322452 | None:intergenic |
| TCCTCATGATTTGATAAATA+AGG | 0.270829 | 7.3:-321202 | MS.gene22755:CDS |
| GCTTTGCAAGCTCAACATTC+AGG | 0.271530 | 7.3:-321705 | MS.gene22755:CDS |
| TTAGCAACCTTCTTGATTCT+TGG | 0.278037 | 7.3:-321386 | MS.gene22755:CDS |
| TACAGGGACGACTTGCCTTT+CGG | 0.283902 | 7.3:-321266 | MS.gene22755:intron |
| GGTTTCCCATCTAGACAAAT+TGG | 0.286499 | 7.3:-321972 | MS.gene22755:CDS |
| CCCTTCCAGGCGTATCCTCT+TGG | 0.318732 | 7.3:+320939 | None:intergenic |
| CAAAGACTGCTGTGCAAATC+AGG | 0.320713 | 7.3:-329863 | MS.gene22755:CDS |
| CGTTCCGCCCCTGCTTTCCT+TGG | 0.327004 | 7.3:+320990 | None:intergenic |
| ATATCTCCTTGATCTGTCTT+AGG | 0.340962 | 7.3:+321783 | None:intergenic |
| GGTGAACCAATTTGTCTAGA+TGG | 0.346189 | 7.3:+321966 | None:intergenic |
| CATCATCTATCTTCAACATC+TGG | 0.356720 | 7.3:+322534 | None:intergenic |
| TGCCGAAGATACAGATGAAC+AGG | 0.360829 | 7.3:+322688 | None:intergenic |
| ATGAGGAGGTGAAAAGCTTT+GGG | 0.361595 | 7.3:+321218 | None:intergenic |
| CTTGCTGCAGCATGGGCTGC+AGG | 0.364555 | 7.3:+322065 | None:intergenic |
| GAACCCTGATTCCAACAAAA+TGG | 0.366904 | 7.3:-321571 | MS.gene22755:CDS |
| CTAGAAGCCCTCAAGCTATA+TGG | 0.366925 | 7.3:-329997 | MS.gene22755:CDS |
| TTGCTCCACTATGTAATGTT+GGG | 0.369916 | 7.3:+322967 | None:intergenic |
| TTACATAGTGGAGCAAAGTA+TGG | 0.371275 | 7.3:-322960 | MS.gene22755:CDS |
| GAATCAGGGTTCTCAGAAAC+TGG | 0.380151 | 7.3:+321582 | None:intergenic |
| GACAAATTCCTGCACCATAA+GGG | 0.382064 | 7.3:-322633 | MS.gene22755:CDS |
| CATGAGGAGGTGAAAAGCTT+TGG | 0.391387 | 7.3:+321217 | None:intergenic |
| CTTGTAAAAGGTGCTGCATT+AGG | 0.396536 | 7.3:-323074 | MS.gene22755:CDS |
| CTTCTATATCGACGACTACT+AGG | 0.397927 | 7.3:+321411 | None:intergenic |
| GGATTTCTAACCATGGGTCT+TGG | 0.398079 | 7.3:-321075 | MS.gene22755:CDS |
| AAACTTAAGACTCGTCGAAC+AGG | 0.401478 | 7.3:-321045 | MS.gene22755:CDS |
| TGGTGCTGTGGACTTCGTTT+TGG | 0.406608 | 7.3:-330553 | MS.gene22755:intron |
| CACGTTGTTGATGGGAACTT+TGG | 0.409244 | 7.3:-322353 | MS.gene22755:CDS |
| ACATTGGTCTTGCGAGGATA+AGG | 0.411349 | 7.3:+322996 | None:intergenic |
| GATTCTCCTGCTTGCTCTCA+AGG | 0.412243 | 7.3:-321996 | MS.gene22755:CDS |
| AGAACAATTCTCCAACTTAG+AGG | 0.412800 | 7.3:+322475 | None:intergenic |
| TCCCATGGCCTCTGAGTTTG+TGG | 0.413076 | 7.3:-331076 | MS.gene22755:CDS |
| CCTTCCAGGCGTATCCTCTT+GGG | 0.419975 | 7.3:+320940 | None:intergenic |
| GAGAAGGAAGCACTTGTAAA+AGG | 0.422043 | 7.3:-323086 | MS.gene22755:CDS |
| CGAGCATGGCAGCGTATAGA+AGG | 0.422755 | 7.3:-329973 | MS.gene22755:intron |
| GGAGAATTGTTCTCCGAAAT+CGG | 0.424106 | 7.3:-322465 | MS.gene22755:CDS |
| AGACAAATTCCTGCACCATA+AGG | 0.431378 | 7.3:-322634 | MS.gene22755:CDS |
| TCACTTGTGTTTGATGCAGC+TGG | 0.433165 | 7.3:+322233 | None:intergenic |
| AGCAAAACTTGCTGCAGCAT+GGG | 0.435145 | 7.3:+322058 | None:intergenic |
| GCTTTGGGGCAACACCTCTC+TGG | 0.439351 | 7.3:+321233 | None:intergenic |
| GCTGGATTTGCGAAGAGGTT+AGG | 0.440092 | 7.3:+322251 | None:intergenic |
| AAATGCATTTCTTGCTCTCA+AGG | 0.445522 | 7.3:+321154 | None:intergenic |
| TAGTAGAGGCCAAGGAAAGC+AGG | 0.446953 | 7.3:-320999 | MS.gene22755:CDS |
| ACTGCATGGTGGGCAGCTCA+TGG | 0.449952 | 7.3:-321900 | MS.gene22755:CDS |
| ATCACTGTGCACGTTGTTGA+TGG | 0.454210 | 7.3:-322362 | MS.gene22755:CDS |
| TGTTTACTAATATTTGTTGA+TGG | 0.455780 | 7.3:+321810 | None:intergenic |
| GAGGACAGGCAAAAGCTGTC+TGG | 0.462645 | 7.3:+321853 | None:intergenic |
| ACAAATTCCTGCACCATAAG+GGG | 0.465629 | 7.3:-322632 | MS.gene22755:CDS |
| GTTTATATCAAGATTAATAG+TGG | 0.465812 | 7.3:+321608 | None:intergenic |
| CTTGCTCATGCAGAACATAT+AGG | 0.466013 | 7.3:-329888 | MS.gene22755:intron |
| ACCCTGTTCATCTGTATCTT+CGG | 0.470243 | 7.3:-322690 | MS.gene22755:CDS |
| TGCTCGGCCATATAGCTTGA+GGG | 0.477143 | 7.3:+329990 | None:intergenic |
| CCAACGCTTCTTTGCTTACG+TGG | 0.478415 | 7.3:+331141 | None:intergenic |
| TTGCGAGGATAAGGATTGCT+TGG | 0.483780 | 7.3:+323005 | None:intergenic |
| GACTCTACATTTCAGCCAAT+AGG | 0.484471 | 7.3:-322290 | MS.gene22755:CDS |
| TTTGCTCCACTATGTAATGT+TGG | 0.491563 | 7.3:+322966 | None:intergenic |
| AGCTGCTGCAACTGCATGGT+GGG | 0.492943 | 7.3:-321910 | MS.gene22755:CDS |
| CAAGGAAAGCAGGGGCGGAA+CGG | 0.493129 | 7.3:-320989 | MS.gene22755:CDS |
| CAACCACCTAAGACAGATCA+AGG | 0.494885 | 7.3:-321789 | MS.gene22755:CDS |
| CAAGAGGATACGCCTGGAAG+GGG | 0.496539 | 7.3:-320938 | MS.gene22755:CDS |
| GTAGCTAAATGATCCGCATC+AGG | 0.496824 | 7.3:+321438 | None:intergenic |
| TCAGCATGGTTATGTGCAAA+TGG | 0.496955 | 7.3:+322155 | None:intergenic |
| TGGGACCCGTCTCTTCAACT+TGG | 0.503574 | 7.3:+320959 | None:intergenic |
| CCAAGAGGATACGCCTGGAA+GGG | 0.504041 | 7.3:-320939 | MS.gene22755:CDS |
| AGTTGTTGATGCAGGAGGAC+AGG | 0.504260 | 7.3:+321839 | None:intergenic |
| GTTATTACCTCTTTCACTGA+AGG | 0.506309 | 7.3:+322602 | None:intergenic |
| CTTCTATACGCTGCCATGCT+CGG | 0.509729 | 7.3:+329974 | None:intergenic |
| GGGTCCCAAGAGGATACGCC+TGG | 0.511211 | 7.3:-320944 | MS.gene22755:CDS |
| CAGGGTTCTCAGAAACTGGT+TGG | 0.511462 | 7.3:+321586 | None:intergenic |
| GTTTACACCTTCAGTGAAAG+AGG | 0.512851 | 7.3:-322609 | MS.gene22755:CDS |
| CCTTCTTGATTCTTGGAAGG+AGG | 0.514276 | 7.3:-321379 | MS.gene22755:CDS |
| CATTTGTCGAACCTCTAAGT+TGG | 0.515112 | 7.3:-322486 | MS.gene22755:CDS |
| CCACGTAAGCAAAGAAGCGT+TGG | 0.516332 | 7.3:-331141 | MS.gene22755:CDS |
| CAACCTTCTTGATTCTTGGA+AGG | 0.517741 | 7.3:-321382 | MS.gene22755:CDS |
| TGTAGAAGACATGTTGAGAA+AGG | 0.517978 | 7.3:+322124 | None:intergenic |
| TTGCTGCAGCATGGGCTGCA+GGG | 0.518760 | 7.3:+322066 | None:intergenic |
| ACCCACAAACTCAGAGGCCA+TGG | 0.520747 | 7.3:+331074 | None:intergenic |
| ATGCTCGGCCATATAGCTTG+AGG | 0.521384 | 7.3:+329989 | None:intergenic |
| CCCAAGAGGATACGCCTGGA+AGG | 0.522353 | 7.3:-320940 | MS.gene22755:CDS |
| ACGTGCACAGTGATATGTCT+TGG | 0.523923 | 7.3:+322371 | None:intergenic |
| GTGAACCAATTTGTCTAGAT+GGG | 0.530035 | 7.3:+321967 | None:intergenic |
| CAGCAAAACTTGCTGCAGCA+TGG | 0.533463 | 7.3:+322057 | None:intergenic |
| CGTGCACAGTGATATGTCTT+GGG | 0.533974 | 7.3:+322372 | None:intergenic |
| CACGTAAGCAAAGAAGCGTT+GGG | 0.535828 | 7.3:-331140 | MS.gene22755:CDS |
| AAAAGTATTAACAGTCCTCA+AGG | 0.540476 | 7.3:-322717 | MS.gene22755:CDS |
| TCTCCTTGATCTGTCTTAGG+TGG | 0.542096 | 7.3:+321786 | None:intergenic |
| GATTCAGATGAAGAAACAGC+TGG | 0.543112 | 7.3:+321672 | None:intergenic |
| CTGATAGACCGGTCTTCTTG+TGG | 0.544065 | 7.3:-321537 | MS.gene22755:CDS |
| TGAGAAAGAATCACTTCTAG+AGG | 0.549009 | 7.3:-322886 | MS.gene22755:intron |
| CAGTAGCTGCTGCAACTGCA+TGG | 0.549463 | 7.3:-321914 | MS.gene22755:CDS |
| GAAGATTCTACATTTGCATA+CGG | 0.549998 | 7.3:+322023 | None:intergenic |
| TTCACAGCTAGAGGTTGTGT+TGG | 0.551194 | 7.3:+321512 | None:intergenic |
| AGAGGATACGCCTGGAAGGG+GGG | 0.551215 | 7.3:-320936 | MS.gene22755:CDS |
| AGAGAAGGATGAGAAAGAAA+AGG | 0.551265 | 7.3:-321475 | MS.gene22755:CDS |
| CTAACCATGGGTCTTGGACA+AGG | 0.551976 | 7.3:-321069 | MS.gene22755:CDS |
| AAGAGGATACGCCTGGAAGG+GGG | 0.554626 | 7.3:-320937 | MS.gene22755:CDS |
| TTCACACGGTAAACAAGCAA+TGG | 0.555075 | 7.3:-322913 | MS.gene22755:CDS |
| CAGATGTTGAAGATAGATGA+TGG | 0.559885 | 7.3:-322533 | MS.gene22755:CDS |
| AGTAGAGGCCAAGGAAAGCA+GGG | 0.563052 | 7.3:-320998 | MS.gene22755:CDS |
| TTGGGTCCACAATTGACAGC+TGG | 0.564573 | 7.3:-331122 | MS.gene22755:CDS |
| TATCCTCGCAAGACCAATGT+TGG | 0.566159 | 7.3:-322993 | MS.gene22755:CDS |
| TGTTTCTTCATCTGAATCAG+AGG | 0.567469 | 7.3:-321667 | MS.gene22755:CDS |
| AAGATGTTTAGTAGAGGCCA+AGG | 0.570129 | 7.3:-321007 | MS.gene22755:CDS |
| TAATGTTGGGGTACCAACAT+TGG | 0.570681 | 7.3:+322980 | None:intergenic |
| TCTACATTTCAGCCAATAGG+AGG | 0.570815 | 7.3:-322287 | MS.gene22755:CDS |
| TGCAACCAAGTTGAAGAGAC+GGG | 0.572457 | 7.3:-320964 | MS.gene22755:CDS |
| TTTACCTTGTCCAAGACCCA+TGG | 0.574964 | 7.3:+321065 | None:intergenic |
| TCCTTATTTATCAAATCATG+AGG | 0.575227 | 7.3:+321201 | None:intergenic |
| AGTAACTGATCTTGCAGAGG+AGG | 0.576051 | 7.3:+321747 | None:intergenic |
| GTACAAAATAACAATGAGGA+GGG | 0.578098 | 7.3:-321096 | MS.gene22755:CDS |
| TGTTGGAACCACAAGAAGAC+CGG | 0.580340 | 7.3:+321529 | None:intergenic |
| TAAGTTAAATACTTCATCAA+AGG | 0.580402 | 7.3:-321631 | MS.gene22755:CDS |
| GATAAATAAGGATAATCAGA+TGG | 0.582791 | 7.3:-321190 | MS.gene22755:CDS |
| AGGAGCATAAAGATGAGGAA+AGG | 0.584458 | 7.3:-322778 | MS.gene22755:CDS |
| ATGCAGCTGGATTTGCGAAG+AGG | 0.585055 | 7.3:+322246 | None:intergenic |
| ATCAGTCTCTTCACAGCTAG+AGG | 0.585395 | 7.3:+321503 | None:intergenic |
| AAGACATGTTGAGAAAGGAT+TGG | 0.586137 | 7.3:+322129 | None:intergenic |
| TCAAGCTATATGGCCGAGCA+TGG | 0.586429 | 7.3:-329987 | MS.gene22755:CDS |
| CAGGCAAAAGCTGTCTGGAG+TGG | 0.586706 | 7.3:+321858 | None:intergenic |
| TACATTTCAGCCAATAGGAG+GGG | 0.587380 | 7.3:-322285 | MS.gene22755:CDS |
| GAGGCCAAGGAAAGCAGGGG+CGG | 0.588873 | 7.3:-320994 | MS.gene22755:CDS |
| GAAAGGATTGGTAATCAGCA+TGG | 0.589647 | 7.3:+322141 | None:intergenic |
| GGCTGCAGGGTGTTGCAGCA+AGG | 0.592386 | 7.3:+322079 | None:intergenic |
| AAACCTCCTTGAGAGCAAGC+AGG | 0.592869 | 7.3:+321990 | None:intergenic |
| TCACTGTGCACGTTGTTGAT+GGG | 0.593058 | 7.3:-322361 | MS.gene22755:CDS |
| TTGCAACCAAGTTGAAGAGA+CGG | 0.593914 | 7.3:-320965 | MS.gene22755:CDS |
| TGCTCCACTATGTAATGTTG+GGG | 0.594962 | 7.3:+322968 | None:intergenic |
| CCCATGGCCTCTGAGTTTGT+GGG | 0.596858 | 7.3:-331075 | MS.gene22755:intron |
| AGGGCAGAAAACTGATAGAC+CGG | 0.597583 | 7.3:-321548 | MS.gene22755:CDS |
| AGGAAATGATTGATGACTAG+AGG | 0.599729 | 7.3:+322187 | None:intergenic |
| GGAGCTACAGTTGTTGATGC+AGG | 0.599804 | 7.3:+321831 | None:intergenic |
| AGAGACTGATGCGCTAGAGA+AGG | 0.599937 | 7.3:-321490 | MS.gene22755:CDS |
| GAAGATGCAATTGCAATAAG+TGG | 0.600078 | 7.3:+322933 | None:intergenic |
| CCTCCTTCCAAGAATCAAGA+AGG | 0.605249 | 7.3:+321379 | None:intergenic |
| GTCTGGAGTGGAGCGCACAC+AGG | 0.605716 | 7.3:+321870 | None:intergenic |
| ATGAACAGGGTGCCTCCTTG+AGG | 0.606893 | 7.3:+322702 | None:intergenic |
| AGAATGTAAAATACCTGATG+CGG | 0.606991 | 7.3:-321451 | MS.gene22755:CDS |
| TGTACAAAATAACAATGAGG+AGG | 0.608346 | 7.3:-321097 | MS.gene22755:CDS |
| GAGGAGGGATTTCTAACCAT+GGG | 0.609248 | 7.3:-321081 | MS.gene22755:CDS |
| CCCTGATTCCAACAAAATGG+AGG | 0.609942 | 7.3:-321568 | MS.gene22755:CDS |
| TTGGAAGGAGGTGTCTGAAG+AGG | 0.610275 | 7.3:-321367 | MS.gene22755:intron |
| GCTGCAATAGCTGTTACACT+AGG | 0.611198 | 7.3:+321942 | None:intergenic |
| ATGCATTTGTAATTGTGACC+AGG | 0.611387 | 7.3:-321139 | MS.gene22755:CDS |
| TGTCTGCCAGCTGTCAATTG+TGG | 0.613429 | 7.3:+331116 | None:intergenic |
| ATTGCAATTGCATCTTCACA+CGG | 0.615445 | 7.3:-322927 | MS.gene22755:CDS |
| CTACATTTCAGCCAATAGGA+GGG | 0.615585 | 7.3:-322286 | MS.gene22755:CDS |
| CCCACAAACTCAGAGGCCAT+GGG | 0.615882 | 7.3:+331075 | None:intergenic |
| TTATGTGCAAATGGAGGACA+AGG | 0.617284 | 7.3:+322164 | None:intergenic |
| TCTCCTGCTTGCTCTCAAGG+AGG | 0.617634 | 7.3:-321993 | MS.gene22755:CDS |
| TCATCTGAATCAGAGGAGAG+TGG | 0.620785 | 7.3:-321660 | MS.gene22755:CDS |
| GCAATAGCTGTTACACTAGG+AGG | 0.623513 | 7.3:+321945 | None:intergenic |
| TTACAAAAGATGTTTAGTAG+AGG | 0.626106 | 7.3:-321013 | MS.gene22755:CDS |
| ACATTTCAGCCAATAGGAGG+GGG | 0.626802 | 7.3:-322284 | MS.gene22755:CDS |
| AACTTAAGACTCGTCGAACA+GGG | 0.627230 | 7.3:-321044 | MS.gene22755:CDS |
| TCTGGAGAATAGAGCCCGAA+AGG | 0.627276 | 7.3:+321251 | None:intergenic |
| GGTACCCCAACATTACATAG+TGG | 0.634415 | 7.3:-322972 | MS.gene22755:CDS |
| CCTGATTCCAACAAAATGGA+GGG | 0.636366 | 7.3:-321567 | MS.gene22755:CDS |
| CAAATTCCTGCACCATAAGG+GGG | 0.636736 | 7.3:-322631 | MS.gene22755:CDS |
| GTTCAATCCGAGAAAACAGA+TGG | 0.637949 | 7.3:-322443 | MS.gene22755:CDS |
| TCACAAAACAAAGAGAACGT+TGG | 0.639437 | 7.3:-330044 | MS.gene22755:CDS |
| TAGCTGCTGCAACTGCATGG+TGG | 0.645180 | 7.3:-321911 | MS.gene22755:CDS |
| GTACCAACATTGGTCTTGCG+AGG | 0.646677 | 7.3:+322990 | None:intergenic |
| TGAGGAGGTGAAAAGCTTTG+GGG | 0.648977 | 7.3:+321219 | None:intergenic |
| TTATTTATCAAATCATGAGG+AGG | 0.652992 | 7.3:+321204 | None:intergenic |
| AAGTGAAAATCAAAATAACA+TGG | 0.654350 | 7.3:-322216 | MS.gene22755:CDS |
| GCATGGTTATGTGCAAATGG+AGG | 0.655038 | 7.3:+322158 | None:intergenic |
| TGAGGAGGGATTTCTAACCA+TGG | 0.655042 | 7.3:-321082 | MS.gene22755:CDS |
| ATGGTGCAGGAATTTGTCTG+TGG | 0.659918 | 7.3:+322638 | None:intergenic |
| GTAGAGGCCAAGGAAAGCAG+GGG | 0.661260 | 7.3:-320997 | MS.gene22755:CDS |
| TCTAGTAACTGATCTTGCAG+AGG | 0.667647 | 7.3:+321744 | None:intergenic |
| TTGAAGAGACGGGTCCCAAG+AGG | 0.668417 | 7.3:-320954 | MS.gene22755:CDS |
| GCTACAGTTGTTGATGCAGG+AGG | 0.672632 | 7.3:+321834 | None:intergenic |
| TGTGCAAATGGAGGACAAGG+AGG | 0.682903 | 7.3:+322167 | None:intergenic |
| AGATGAGGAAAGGCCAACGA+CGG | 0.690777 | 7.3:-322768 | MS.gene22755:CDS |
| ATTTGTACAAAATAACAATG+AGG | 0.690995 | 7.3:-321100 | MS.gene22755:CDS |
| AAACACACACAAAAGAACGA+TGG | 0.697228 | 7.3:-322509 | MS.gene22755:CDS |
| TCGGGCTCTATTCTCCAGAG+AGG | 0.699278 | 7.3:-321247 | MS.gene22755:CDS |
| AATCTCACCCACAAACTCAG+AGG | 0.700699 | 7.3:+331068 | None:intergenic |
| AGTATTAACAGTCCTCAAGG+AGG | 0.725209 | 7.3:-322714 | MS.gene22755:CDS |
| GCCGAAGATACAGATGAACA+GGG | 0.736992 | 7.3:+322689 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 320924 | 331166 | 320924 | ID=MS.gene22755 |
| chr7.3 | mRNA | 320924 | 331166 | 320924 | ID=MS.gene22755.t1;Parent=MS.gene22755 |
| chr7.3 | exon | 331076 | 331166 | 331076 | ID=MS.gene22755.t1.exon1;Parent=MS.gene22755.t1 |
| chr7.3 | CDS | 331076 | 331166 | 331076 | ID=cds.MS.gene22755.t1;Parent=MS.gene22755.t1 |
| chr7.3 | exon | 330554 | 330579 | 330554 | ID=MS.gene22755.t1.exon2;Parent=MS.gene22755.t1 |
| chr7.3 | CDS | 330554 | 330579 | 330554 | ID=cds.MS.gene22755.t1;Parent=MS.gene22755.t1 |
| chr7.3 | exon | 329974 | 330085 | 329974 | ID=MS.gene22755.t1.exon3;Parent=MS.gene22755.t1 |
| chr7.3 | CDS | 329974 | 330085 | 329974 | ID=cds.MS.gene22755.t1;Parent=MS.gene22755.t1 |
| chr7.3 | exon | 329836 | 329897 | 329836 | ID=MS.gene22755.t1.exon4;Parent=MS.gene22755.t1 |
| chr7.3 | CDS | 329836 | 329897 | 329836 | ID=cds.MS.gene22755.t1;Parent=MS.gene22755.t1 |
| chr7.3 | exon | 322887 | 323111 | 322887 | ID=MS.gene22755.t1.exon5;Parent=MS.gene22755.t1 |
| chr7.3 | CDS | 322887 | 323111 | 322887 | ID=cds.MS.gene22755.t1;Parent=MS.gene22755.t1 |
| chr7.3 | exon | 321368 | 322798 | 321368 | ID=MS.gene22755.t1.exon6;Parent=MS.gene22755.t1 |
| chr7.3 | CDS | 321368 | 322798 | 321368 | ID=cds.MS.gene22755.t1;Parent=MS.gene22755.t1 |
| chr7.3 | exon | 320924 | 321283 | 320924 | ID=MS.gene22755.t1.exon7;Parent=MS.gene22755.t1 |
| chr7.3 | CDS | 320924 | 321283 | 320924 | ID=cds.MS.gene22755.t1;Parent=MS.gene22755.t1 |
| Gene Sequence |
| Protein sequence |