Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23949.t1 | XP_003597894.1 | 98.8 | 665 | 8 | 0 | 1 | 665 | 1 | 665 | 0.00E+00 | 1382.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23949.t1 | Q41142 | 82.1 | 665 | 118 | 1 | 1 | 665 | 1 | 664 | 0.0e+00 | 1179.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23949.t1 | Q2HUA3 | 98.8 | 665 | 8 | 0 | 1 | 665 | 1 | 665 | 0.0e+00 | 1382.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050414 | MS.gene23949 | 0.809506 | 1.83E-50 | -1.69E-46 |
| MS.gene051279 | MS.gene23949 | 0.801565 | 8.48E-49 | -1.69E-46 |
| MS.gene052514 | MS.gene23949 | 0.800454 | 1.43E-48 | -1.69E-46 |
| MS.gene052609 | MS.gene23949 | 0.811978 | 5.34E-51 | -1.69E-46 |
| MS.gene053143 | MS.gene23949 | 0.869476 | 3.01E-66 | -1.69E-46 |
| MS.gene054554 | MS.gene23949 | 0.808056 | 3.74E-50 | -1.69E-46 |
| MS.gene054585 | MS.gene23949 | 0.863019 | 3.36E-64 | -1.69E-46 |
| MS.gene054824 | MS.gene23949 | 0.807406 | 5.13E-50 | -1.69E-46 |
| MS.gene058649 | MS.gene23949 | 0.80611 | 9.64E-50 | -1.69E-46 |
| MS.gene061100 | MS.gene23949 | 0.807294 | 5.42E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23949.t1 | MTR_2g103730 | 98.797 | 665 | 8 | 0 | 1 | 665 | 1 | 665 | 0.0 | 1368 |
| MS.gene23949.t1 | MTR_4g010650 | 85.564 | 665 | 95 | 1 | 1 | 665 | 1 | 664 | 0.0 | 1206 |
| MS.gene23949.t1 | MTR_3g107320 | 64.971 | 688 | 201 | 8 | 5 | 665 | 4 | 678 | 0.0 | 898 |
| MS.gene23949.t1 | MTR_3g107360 | 64.412 | 680 | 214 | 9 | 5 | 665 | 4 | 674 | 0.0 | 883 |
| MS.gene23949.t1 | MTR_5g011050 | 44.921 | 699 | 324 | 15 | 4 | 665 | 36 | 710 | 0.0 | 591 |
| MS.gene23949.t1 | MTR_7g075910 | 44.798 | 692 | 334 | 14 | 4 | 665 | 297 | 970 | 0.0 | 587 |
| MS.gene23949.t1 | MTR_8g033080 | 44.729 | 702 | 331 | 15 | 1 | 665 | 224 | 905 | 0.0 | 583 |
| MS.gene23949.t1 | MTR_5g011060 | 44.331 | 688 | 338 | 15 | 4 | 665 | 36 | 704 | 0.0 | 576 |
| MS.gene23949.t1 | MTR_8g088690 | 43.750 | 704 | 336 | 15 | 4 | 665 | 13 | 698 | 0.0 | 554 |
| MS.gene23949.t1 | MTR_5g023050 | 44.091 | 660 | 307 | 12 | 50 | 665 | 86 | 727 | 0.0 | 547 |
| MS.gene23949.t1 | MTR_3g114840 | 42.697 | 712 | 347 | 15 | 2 | 665 | 9 | 707 | 0.0 | 544 |
| MS.gene23949.t1 | MTR_3g114840 | 42.697 | 712 | 347 | 15 | 2 | 665 | 9 | 707 | 0.0 | 543 |
| MS.gene23949.t1 | MTR_8g033080 | 44.984 | 618 | 297 | 12 | 1 | 590 | 224 | 826 | 5.84e-176 | 523 |
| MS.gene23949.t1 | MTR_2g100250 | 43.524 | 664 | 315 | 15 | 5 | 665 | 4 | 610 | 5.14e-172 | 509 |
| MS.gene23949.t1 | MTR_8g016160 | 41.642 | 670 | 317 | 20 | 5 | 666 | 7 | 610 | 1.55e-155 | 467 |
| MS.gene23949.t1 | MTR_5g023040 | 51.389 | 72 | 31 | 1 | 324 | 395 | 806 | 873 | 2.72e-18 | 89.7 |
| MS.gene23949.t1 | MTR_1g083620 | 28.696 | 230 | 119 | 9 | 211 | 427 | 387 | 584 | 3.02e-15 | 80.1 |
| MS.gene23949.t1 | MTR_1g083620 | 29.004 | 231 | 119 | 9 | 210 | 427 | 126 | 324 | 4.85e-15 | 79.3 |
| MS.gene23949.t1 | MTR_2g435560 | 26.641 | 259 | 135 | 11 | 211 | 449 | 388 | 611 | 1.23e-14 | 78.2 |
| MS.gene23949.t1 | MTR_2g435560 | 26.641 | 259 | 135 | 11 | 211 | 449 | 253 | 476 | 1.50e-14 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23949.t1 | AT3G15730 | 79.671 | 669 | 129 | 2 | 1 | 665 | 1 | 666 | 0.0 | 1135 |
| MS.gene23949.t1 | AT1G52570 | 77.961 | 667 | 144 | 3 | 1 | 665 | 1 | 666 | 0.0 | 1098 |
| MS.gene23949.t1 | AT1G52570 | 77.961 | 667 | 144 | 3 | 1 | 665 | 1 | 666 | 0.0 | 1098 |
| MS.gene23949.t1 | AT1G52570 | 77.961 | 667 | 144 | 3 | 1 | 665 | 1 | 666 | 0.0 | 1098 |
| MS.gene23949.t1 | AT5G25370 | 61.947 | 678 | 234 | 8 | 3 | 665 | 4 | 672 | 0.0 | 856 |
| MS.gene23949.t1 | AT5G25370 | 61.947 | 678 | 234 | 8 | 3 | 665 | 4 | 672 | 0.0 | 856 |
| MS.gene23949.t1 | AT5G25370 | 61.947 | 678 | 234 | 8 | 3 | 665 | 4 | 672 | 0.0 | 856 |
| MS.gene23949.t1 | AT5G25370 | 65.772 | 596 | 199 | 4 | 72 | 665 | 5 | 597 | 0.0 | 822 |
| MS.gene23949.t1 | AT2G42010 | 44.331 | 688 | 340 | 14 | 4 | 665 | 269 | 939 | 0.0 | 588 |
| MS.gene23949.t1 | AT2G42010 | 43.099 | 710 | 342 | 14 | 4 | 665 | 269 | 964 | 0.0 | 582 |
| MS.gene23949.t1 | AT4G00240 | 44.234 | 685 | 345 | 13 | 4 | 665 | 113 | 783 | 0.0 | 578 |
| MS.gene23949.t1 | AT4G00240 | 45.938 | 640 | 315 | 11 | 44 | 665 | 122 | 748 | 0.0 | 574 |
| MS.gene23949.t1 | AT4G00240 | 45.938 | 640 | 315 | 11 | 44 | 665 | 5 | 631 | 0.0 | 573 |
| MS.gene23949.t1 | AT4G11830 | 43.948 | 694 | 342 | 16 | 5 | 665 | 33 | 712 | 0.0 | 565 |
| MS.gene23949.t1 | AT4G11850 | 43.768 | 690 | 345 | 14 | 5 | 665 | 39 | 714 | 0.0 | 560 |
| MS.gene23949.t1 | AT4G11830 | 45.046 | 646 | 317 | 13 | 44 | 665 | 49 | 680 | 0.0 | 559 |
| MS.gene23949.t1 | AT4G11840 | 43.228 | 694 | 347 | 15 | 5 | 665 | 43 | 722 | 0.0 | 553 |
| MS.gene23949.t1 | AT4G11840 | 42.857 | 693 | 321 | 15 | 5 | 665 | 43 | 692 | 0.0 | 539 |
| MS.gene23949.t1 | AT4G35790 | 44.512 | 656 | 309 | 15 | 46 | 665 | 76 | 712 | 7.58e-178 | 528 |
| MS.gene23949.t1 | AT4G35790 | 44.078 | 667 | 307 | 16 | 46 | 665 | 76 | 723 | 8.46e-176 | 523 |
| MS.gene23949.t1 | AT4G35790 | 45.219 | 617 | 290 | 13 | 46 | 627 | 76 | 679 | 5.50e-175 | 515 |
| MS.gene23949.t1 | AT4G11830 | 43.678 | 609 | 306 | 11 | 5 | 590 | 33 | 627 | 3.88e-170 | 501 |
| MS.gene23949.t1 | AT4G11830 | 43.740 | 599 | 300 | 12 | 5 | 580 | 33 | 617 | 3.21e-166 | 491 |
| MS.gene23949.t1 | AT1G55180 | 40.610 | 623 | 320 | 14 | 50 | 665 | 19 | 598 | 5.57e-154 | 463 |
| MS.gene23949.t1 | AT1G55180 | 39.403 | 670 | 337 | 16 | 6 | 665 | 10 | 620 | 5.85e-154 | 463 |
| MS.gene23949.t1 | AT3G05630 | 25.683 | 549 | 254 | 26 | 208 | 665 | 372 | 857 | 3.61e-18 | 89.7 |
| MS.gene23949.t1 | AT3G16785 | 28.514 | 249 | 123 | 9 | 221 | 449 | 390 | 603 | 3.32e-15 | 80.1 |
| MS.gene23949.t1 | AT3G16785 | 28.514 | 249 | 123 | 9 | 221 | 449 | 390 | 603 | 3.50e-15 | 80.1 |
| MS.gene23949.t1 | AT3G16785 | 28.514 | 249 | 123 | 9 | 221 | 449 | 390 | 603 | 3.81e-15 | 80.1 |
| MS.gene23949.t1 | AT3G16785 | 28.514 | 249 | 123 | 9 | 221 | 449 | 390 | 603 | 3.81e-15 | 80.1 |
| MS.gene23949.t1 | AT3G16785 | 28.514 | 249 | 123 | 9 | 221 | 449 | 390 | 603 | 3.82e-15 | 80.1 |
| MS.gene23949.t1 | AT3G16785 | 28.514 | 249 | 123 | 9 | 221 | 449 | 390 | 603 | 3.82e-15 | 80.1 |
Find 193 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCTGAACTGATGCACTTTC+TGG | 0.110790 | 2.1:+1903408 | None:intergenic |
| CCTATTGGGGCAACCTTAAT+TGG | 0.143828 | 2.1:-1904845 | MS.gene23949:CDS |
| GAATCAGGTTCTGGTCTTTC+AGG | 0.151953 | 2.1:+1903231 | None:intergenic |
| TACTCATCATCAGAAAATTT+TGG | 0.198426 | 2.1:-1904156 | MS.gene23949:CDS |
| ATCTTAAGTGAAAGCTCTTT+TGG | 0.217956 | 2.1:+1903501 | None:intergenic |
| TTGACGGTGGAGCAGCTTTC+GGG | 0.225952 | 2.1:-1903734 | MS.gene23949:CDS |
| CCTGGTGCTTCAATAGAAAA+AGG | 0.253077 | 2.1:-1903969 | MS.gene23949:CDS |
| ACCTCCTGCAAGTTGTATAT+TGG | 0.269725 | 2.1:+1904556 | None:intergenic |
| TAAGGAACTCCAGGAAATTT+AGG | 0.271707 | 2.1:+1904653 | None:intergenic |
| ATCTTTGAATTTCCATGAAT+TGG | 0.275511 | 2.1:+1904740 | None:intergenic |
| TTAGGGTATTAATGCTTGTT+TGG | 0.281535 | 2.1:-1904346 | MS.gene23949:CDS |
| AGATAGGTGGGTTGAAATAT+TGG | 0.293912 | 2.1:-1904777 | MS.gene23949:CDS |
| ATGTTTCAAAAGACCGCAAC+TGG | 0.294096 | 2.1:-1904694 | MS.gene23949:CDS |
| ATTGACGGTGGAGCAGCTTT+CGG | 0.298826 | 2.1:-1903735 | MS.gene23949:CDS |
| TGGTGCCAATTTCTATATTC+TGG | 0.302016 | 2.1:+1904183 | None:intergenic |
| GTGAAAGATGATAATCCTAT+TGG | 0.323636 | 2.1:-1904860 | MS.gene23949:CDS |
| ATCAATGGTTGCATAAAGTT+TGG | 0.323808 | 2.1:+1905000 | None:intergenic |
| CCTCCTGCAAGTTGTATATT+GGG | 0.327612 | 2.1:+1904557 | None:intergenic |
| CCAATTAAGGTTGCCCCAAT+AGG | 0.334639 | 2.1:+1904845 | None:intergenic |
| TTTCATCAGCCTAACTTTCC+TGG | 0.335279 | 2.1:-1903987 | MS.gene23949:CDS |
| CCAGCTTTAGCAGCATCTTC+AGG | 0.337228 | 2.1:+1903699 | None:intergenic |
| TTATTTAATCCCACTTCATT+TGG | 0.342886 | 2.1:+1904116 | None:intergenic |
| GTCCCCAATATACAACTTGC+AGG | 0.343312 | 2.1:-1904560 | MS.gene23949:CDS |
| TGATCATCAGGGAAAGTTAC+TGG | 0.348678 | 2.1:+1903789 | None:intergenic |
| TGAAAGATGATAATCCTATT+GGG | 0.352247 | 2.1:-1904859 | MS.gene23949:CDS |
| TACTGGGGATGGGGTAATAA+TGG | 0.358885 | 2.1:+1903806 | None:intergenic |
| TCACATTTACTGTGCCCATT+TGG | 0.361006 | 2.1:-1904903 | MS.gene23949:CDS |
| CATTCCTGTTGAGGAGGTAT+TGG | 0.363727 | 2.1:-1904813 | MS.gene23949:CDS |
| AGGCACTTAATATACATTAC+AGG | 0.372424 | 2.1:-1904476 | MS.gene23949:CDS |
| ATTGTCCAGAATATAGAAAT+TGG | 0.374763 | 2.1:-1904188 | MS.gene23949:CDS |
| AATGTACGCCCTTCCAATTA+AGG | 0.374946 | 2.1:+1904832 | None:intergenic |
| CCTGAACTGATGCACTTTCT+GGG | 0.377490 | 2.1:+1903409 | None:intergenic |
| ATTCCTGTTGAGGAGGTATT+GGG | 0.378380 | 2.1:-1904812 | MS.gene23949:CDS |
| TAGGGTATTAATGCTTGTTT+GGG | 0.385598 | 2.1:-1904345 | MS.gene23949:CDS |
| CCCAGAAAGTGCATCAGTTC+AGG | 0.391340 | 2.1:-1903409 | MS.gene23949:CDS |
| CACACAAAGACAAGGTTGTA+AGG | 0.391884 | 2.1:-1904621 | MS.gene23949:CDS |
| GCTAAAGCTGGGCTTATTAG+TGG | 0.392386 | 2.1:-1903687 | MS.gene23949:CDS |
| ATTAGAAGTCCTAAATTTCC+TGG | 0.394374 | 2.1:-1904662 | MS.gene23949:CDS |
| GTGATGTCTCCTCCTGGCTT+TGG | 0.396802 | 2.1:+1904407 | None:intergenic |
| GGCTTGAAGGTCCCATTGCT+TGG | 0.410425 | 2.1:-1903911 | MS.gene23949:CDS |
| TTCCACGTCTCTTGATCATC+AGG | 0.411607 | 2.1:+1903777 | None:intergenic |
| TGCAAAGCACCAATGTCTTC+AGG | 0.412451 | 2.1:+1903531 | None:intergenic |
| GTGAATAAAGAACCAATTCA+TGG | 0.418317 | 2.1:-1904752 | MS.gene23949:CDS |
| CCTGAAGATGCTGCTAAAGC+TGG | 0.422903 | 2.1:-1903699 | MS.gene23949:CDS |
| TCTTCATGCTACAATCTTTG+AGG | 0.430433 | 2.1:-1906803 | MS.gene23949:CDS |
| TGTCTTATGCCCTCGCAATC+CGG | 0.432330 | 2.1:-1904225 | MS.gene23949:CDS |
| TTACTTACCTATCATCATCT+TGG | 0.432761 | 2.1:+1903158 | None:intergenic |
| TTCGGAAAAGTGAATGAAAC+GGG | 0.434688 | 2.1:+1904036 | None:intergenic |
| TTTGAGGAGACAGTTGGATT+CGG | 0.439825 | 2.1:-1905034 | MS.gene23949:CDS |
| CTTTGTGTGTAGAAAGCATA+AGG | 0.440268 | 2.1:+1904635 | None:intergenic |
| ATACTGAGATTTCCTTGGTA+AGG | 0.443762 | 2.1:-1904442 | MS.gene23949:CDS |
| ATTGAAGCACCAGGAAAGTT+AGG | 0.444896 | 2.1:+1903978 | None:intergenic |
| ATATAATCTGAATCAGGTTC+TGG | 0.445716 | 2.1:+1903222 | None:intergenic |
| ATTGAAAATCAATATTTCCT+TGG | 0.448120 | 2.1:-1903588 | MS.gene23949:CDS |
| TTTCCTTGGTAAGGGATTCA+AGG | 0.448128 | 2.1:-1904433 | MS.gene23949:CDS |
| GGAAGGATAACATAATAGAT+AGG | 0.450815 | 2.1:-1903665 | MS.gene23949:CDS |
| GTTCATGCCAAGATGATGAT+AGG | 0.452461 | 2.1:-1903165 | MS.gene23949:CDS |
| ATTGTTAGCAAGATTGAAGC+TGG | 0.453049 | 2.1:-1903480 | MS.gene23949:CDS |
| CAAAACTTTGAGGAGACAGT+TGG | 0.453252 | 2.1:-1905040 | MS.gene23949:CDS |
| TTAGATAAGACAAAACTTTG+AGG | 0.453476 | 2.1:-1905050 | MS.gene23949:intron |
| GATATCCACTCAAGGCTTGA+AGG | 0.460473 | 2.1:-1903924 | MS.gene23949:CDS |
| AGCAGCATCTTCAGGAGTCT+CGG | 0.461063 | 2.1:+1903707 | None:intergenic |
| CCACCCAATACCTCCTCAAC+AGG | 0.461488 | 2.1:+1904809 | None:intergenic |
| GCAGCATCTTCAGGAGTCTC+GGG | 0.461536 | 2.1:+1903708 | None:intergenic |
| TCGTGCTTTCTCTAAATCAA+TGG | 0.461965 | 2.1:+1904985 | None:intergenic |
| GCTTGAAGGTCCCATTGCTT+GGG | 0.466265 | 2.1:-1903910 | MS.gene23949:CDS |
| TGTTTATACTGAGATTTCCT+TGG | 0.470042 | 2.1:-1904447 | MS.gene23949:CDS |
| TATTTGACATTCTTCTGCCT+TGG | 0.470173 | 2.1:-1903291 | MS.gene23949:CDS |
| GCTCGCATATAATCTGAATC+AGG | 0.474750 | 2.1:+1903216 | None:intergenic |
| ATATTGGGGACAAAATTGTC+TGG | 0.480142 | 2.1:+1904572 | None:intergenic |
| CAGGGAAAGTTACTGGGGAT+GGG | 0.481757 | 2.1:+1903796 | None:intergenic |
| TACTGAGATTTCCTTGGTAA+GGG | 0.486700 | 2.1:-1904441 | MS.gene23949:CDS |
| GCACTTTCTGGGACACCCTC+AGG | 0.486846 | 2.1:+1903420 | None:intergenic |
| ATATGATATCCGATGCCAAA+TGG | 0.487948 | 2.1:+1904888 | None:intergenic |
| TATGATATCCGATGCCAAAT+GGG | 0.492675 | 2.1:+1904889 | None:intergenic |
| AGGAGCATGTTAATCCTCAA+TGG | 0.492749 | 2.1:-1904937 | MS.gene23949:CDS |
| AGATTATATGCGAGCTCAAG+AGG | 0.493595 | 2.1:-1903208 | MS.gene23949:CDS |
| AGGATCTTCCTCAATTCCCT+TGG | 0.495088 | 2.1:+1903320 | None:intergenic |
| AACAAAACATCCCAAGCAAT+GGG | 0.497488 | 2.1:+1903900 | None:intergenic |
| AAAGACCGCAACTGGGCTCT+AGG | 0.498162 | 2.1:-1904686 | MS.gene23949:CDS |
| GAGACAGTTGGATTCGGAAA+AGG | 0.499116 | 2.1:-1905028 | MS.gene23949:CDS |
| TGTTTAACTTTGAGCAGAGA+TGG | 0.499268 | 2.1:-1903881 | MS.gene23949:CDS |
| GATCATCAGGGAAAGTTACT+GGG | 0.499638 | 2.1:+1903790 | None:intergenic |
| TCAGGGAAAGTTACTGGGGA+TGG | 0.501750 | 2.1:+1903795 | None:intergenic |
| CTTACCAGCCTCATAGATGT+TGG | 0.502263 | 2.1:-1904529 | MS.gene23949:CDS |
| CCAAGTGTGATGTCTCCTCC+TGG | 0.503968 | 2.1:+1904401 | None:intergenic |
| CAGCTATTTAGATCTATTGA+CGG | 0.506424 | 2.1:-1903750 | MS.gene23949:CDS |
| AGGGAAAGTTACTGGGGATG+GGG | 0.517899 | 2.1:+1903797 | None:intergenic |
| GATAAACTCAAGAATATTAG+TGG | 0.518555 | 2.1:-1906778 | MS.gene23949:CDS |
| TTACCAGCCTCATAGATGTT+GGG | 0.519232 | 2.1:-1904528 | MS.gene23949:CDS |
| GATTCAAGGAGGCCAAAGCC+AGG | 0.523097 | 2.1:-1904419 | MS.gene23949:CDS |
| TAGAAAGCATAAGGAACTCC+AGG | 0.524275 | 2.1:+1904644 | None:intergenic |
| ACAATGCTTCCACCATCATC+CGG | 0.527676 | 2.1:+1904206 | None:intergenic |
| ATGGAGGAAGCAAGGTGGAA+AGG | 0.528791 | 2.1:-1903862 | MS.gene23949:CDS |
| ACTCAATGCCAAGGGAATTG+AGG | 0.529142 | 2.1:-1903328 | MS.gene23949:CDS |
| TGGTGGTAACATTCTTTCCA+AGG | 0.530172 | 2.1:-1906758 | MS.gene23949:intron |
| TGCCCTCGCAATCCGGATGA+TGG | 0.530747 | 2.1:-1904218 | MS.gene23949:CDS |
| AAGGACCAGAATCATAGAAA+AGG | 0.537043 | 2.1:-1904957 | MS.gene23949:CDS |
| TTGGGGCAACCTTAATTGGA+AGG | 0.538056 | 2.1:-1904841 | MS.gene23949:CDS |
| AACATAAATCATGAAACGCC+TGG | 0.540335 | 2.1:+1903185 | None:intergenic |
| CCTCCCAACATCTATGAGGC+TGG | 0.541750 | 2.1:+1904525 | None:intergenic |
| ACATCCTCCCAACATCTATG+AGG | 0.542285 | 2.1:+1904521 | None:intergenic |
| CCACCATCATCCGGATTGCG+AGG | 0.547386 | 2.1:+1904215 | None:intergenic |
| CTAAAGCTGGGCTTATTAGT+GGG | 0.547451 | 2.1:-1903686 | MS.gene23949:CDS |
| ATATGCGAGCTCAAGAGGCC+AGG | 0.547877 | 2.1:-1903203 | MS.gene23949:CDS |
| CACAGTGCACTTCAGAGCCT+CGG | 0.549999 | 2.1:+1904246 | None:intergenic |
| GTGGTTCCCATGTGGCCTGA+GGG | 0.550831 | 2.1:-1903435 | MS.gene23949:CDS |
| CTGAAGATGCTGCTAAAGCT+GGG | 0.551525 | 2.1:-1903698 | MS.gene23949:CDS |
| TGTCTGGGATATGAGAATCT+TGG | 0.552039 | 2.1:+1904588 | None:intergenic |
| TCAGGTTCTGGTCTTTCAGG+AGG | 0.552348 | 2.1:+1903234 | None:intergenic |
| AAAAGCACAAGAAGGTGTTA+GGG | 0.552796 | 2.1:-1904363 | MS.gene23949:CDS |
| CAGTTCAGGCAATATTAGAC+TGG | 0.553731 | 2.1:-1903395 | MS.gene23949:CDS |
| ATGGCGCAAATTCTGCTACA+TGG | 0.553894 | 2.1:-1906829 | MS.gene23949:CDS |
| TGAAAAGACTCATTCCATTG+AGG | 0.555517 | 2.1:+1904923 | None:intergenic |
| TTACTGTGCCCATTTGGCAT+CGG | 0.556368 | 2.1:-1904897 | MS.gene23949:CDS |
| AAGGTGGTCCTAGGGAACCT+TGG | 0.556879 | 2.1:-1903950 | MS.gene23949:CDS |
| GTTCGGAAAAGTGAATGAAA+CGG | 0.557902 | 2.1:+1904035 | None:intergenic |
| AAACAAAACATCCCAAGCAA+TGG | 0.559086 | 2.1:+1903899 | None:intergenic |
| TATTGAAGCACTCAATGCCA+AGG | 0.561553 | 2.1:-1903337 | MS.gene23949:CDS |
| GCAAGATTGAAGCTGGGGAA+AGG | 0.562968 | 2.1:-1903473 | MS.gene23949:CDS |
| ATATCATGCCAAGGTTCCCT+AGG | 0.565440 | 2.1:+1903942 | None:intergenic |
| TGGTGAGGAAATAGATAGGT+GGG | 0.565449 | 2.1:-1904789 | MS.gene23949:CDS |
| TCCTTGGAAGTTGCTATGCG+TGG | 0.566885 | 2.1:-1903572 | MS.gene23949:CDS |
| GATGTGCTGTGTCCAGAGTT+CGG | 0.567045 | 2.1:+1904018 | None:intergenic |
| TTGTTAGCAAGATTGAAGCT+GGG | 0.569020 | 2.1:-1903479 | MS.gene23949:CDS |
| AGCTGGGCTTATTAGTGGGA+AGG | 0.572547 | 2.1:-1903682 | MS.gene23949:CDS |
| GAGCAGAGATGGAGGAAGCA+AGG | 0.573687 | 2.1:-1903870 | MS.gene23949:CDS |
| CACCATCATCCGGATTGCGA+GGG | 0.575824 | 2.1:+1904216 | None:intergenic |
| AGGCAATATTAGACTGGCAG+AGG | 0.578738 | 2.1:-1903389 | MS.gene23949:CDS |
| CAATATTAGACTGGCAGAGG+AGG | 0.580334 | 2.1:-1903386 | MS.gene23949:CDS |
| TGGGACACCCTCAGGCCACA+TGG | 0.580916 | 2.1:+1903428 | None:intergenic |
| CCAGGAGGAGACATCACACT+TGG | 0.582493 | 2.1:-1904401 | MS.gene23949:CDS |
| TATTGGGGACAAAATTGTCT+GGG | 0.586684 | 2.1:+1904573 | None:intergenic |
| TTGATGCAATCACAAAAGCA+AGG | 0.590614 | 2.1:-1904496 | MS.gene23949:CDS |
| TGGGGCAACCTTAATTGGAA+GGG | 0.592393 | 2.1:-1904840 | MS.gene23949:CDS |
| TGCTATGCGTGGAGTGCTGA+TGG | 0.592466 | 2.1:-1903561 | MS.gene23949:CDS |
| TAGAGAAAGCACGAGTGGGA+AGG | 0.593690 | 2.1:-1904976 | MS.gene23949:CDS |
| AAGGGCGTACATTCCTGTTG+AGG | 0.595296 | 2.1:-1904822 | MS.gene23949:CDS |
| TGGGTGGTGAGGAAATAGAT+AGG | 0.598716 | 2.1:-1904793 | MS.gene23949:CDS |
| CAGTGAGTTGCCAAATGAAG+TGG | 0.600965 | 2.1:-1904126 | MS.gene23949:CDS |
| TGGGACCTTCAAGCCTTGAG+TGG | 0.600994 | 2.1:+1903919 | None:intergenic |
| CTGCCTTGGCAATCGTGAGG+TGG | 0.601677 | 2.1:-1903277 | MS.gene23949:CDS |
| TGTTAGCAAGATTGAAGCTG+GGG | 0.605624 | 2.1:-1903478 | MS.gene23949:CDS |
| GATTTAGAGAAAGCACGAGT+GGG | 0.609235 | 2.1:-1904980 | MS.gene23949:CDS |
| TGTGGTTCCCATGTGGCCTG+AGG | 0.610251 | 2.1:-1903436 | MS.gene23949:CDS |
| AATCGTGAGGTGGTAAAACA+AGG | 0.614433 | 2.1:-1903267 | MS.gene23949:CDS |
| CTCCTGCAAGTTGTATATTG+GGG | 0.614898 | 2.1:+1904558 | None:intergenic |
| GAAAGATGATAATCCTATTG+GGG | 0.615615 | 2.1:-1904858 | MS.gene23949:CDS |
| TGAGGAGGTATTGGGTGGTG+AGG | 0.615634 | 2.1:-1904804 | MS.gene23949:CDS |
| CAGAGATGGAGGAAGCAAGG+TGG | 0.616614 | 2.1:-1903867 | MS.gene23949:CDS |
| GGCGTACATTCCTGTTGAGG+AGG | 0.617287 | 2.1:-1904819 | MS.gene23949:CDS |
| TCCACGCATAGCAACTTCCA+AGG | 0.620565 | 2.1:+1903571 | None:intergenic |
| GGAGGCATTGATCTCTGTGA+TGG | 0.621298 | 2.1:-1904071 | MS.gene23949:CDS |
| CTTCTGCCTTGGCAATCGTG+AGG | 0.622625 | 2.1:-1903280 | MS.gene23949:CDS |
| GGGACACCCTCAGGCCACAT+GGG | 0.624478 | 2.1:+1903429 | None:intergenic |
| GCTTTCTACACACAAAGACA+AGG | 0.625992 | 2.1:-1904629 | MS.gene23949:CDS |
| GGCACTTAATATACATTACA+GGG | 0.626213 | 2.1:-1904475 | MS.gene23949:CDS |
| TGATTTAGAGAAAGCACGAG+TGG | 0.626791 | 2.1:-1904981 | MS.gene23949:CDS |
| TACTCATGATCAAGAAACTG+AGG | 0.627462 | 2.1:-1904276 | MS.gene23949:CDS |
| AGGGAATTGAGGAAGATCCT+CGG | 0.629175 | 2.1:-1903317 | MS.gene23949:CDS |
| CTTGGCATGATATCCACTCA+AGG | 0.633068 | 2.1:-1903932 | MS.gene23949:CDS |
| AGTGAGTTGCCAAATGAAGT+GGG | 0.635597 | 2.1:-1904125 | MS.gene23949:CDS |
| GGTATTAAGCCTGAAGACAT+TGG | 0.635944 | 2.1:-1903540 | MS.gene23949:CDS |
| AAACTCAAGAATATTAGTGG+TGG | 0.636100 | 2.1:-1906775 | MS.gene23949:CDS |
| CTATTTAGATCTATTGACGG+TGG | 0.636765 | 2.1:-1903747 | MS.gene23949:CDS |
| TTACCACCTCACGATTGCCA+AGG | 0.638073 | 2.1:+1903274 | None:intergenic |
| ATTGAAGCACTCAATGCCAA+GGG | 0.639765 | 2.1:-1903336 | MS.gene23949:CDS |
| AAGGTTCACTGTGTATGTTG+TGG | 0.644280 | 2.1:-1903454 | MS.gene23949:CDS |
| TAATGCCTAGAGCCCAGTTG+CGG | 0.646642 | 2.1:+1904681 | None:intergenic |
| CCTCGCAATCCGGATGATGG+TGG | 0.647794 | 2.1:-1904215 | MS.gene23949:CDS |
| TGTTTGGGATGATAGAACGT+CGG | 0.648160 | 2.1:-1904330 | MS.gene23949:CDS |
| CCTCCTTGAATCCCTTACCA+AGG | 0.648283 | 2.1:+1904430 | None:intergenic |
| GTGGTGAGGAAATAGATAGG+TGG | 0.648470 | 2.1:-1904790 | MS.gene23949:CDS |
| TCCACGTCTCTTGATCATCA+GGG | 0.654558 | 2.1:+1903778 | None:intergenic |
| TCCCTGATGATCAAGAGACG+TGG | 0.655773 | 2.1:-1903779 | MS.gene23949:CDS |
| CAGCATCTTCAGGAGTCTCG+GGG | 0.656506 | 2.1:+1903709 | None:intergenic |
| TGTTTCAAAAGACCGCAACT+GGG | 0.657307 | 2.1:-1904693 | MS.gene23949:CDS |
| CCAGCCTCATAGATGTTGGG+AGG | 0.659901 | 2.1:-1904525 | MS.gene23949:CDS |
| CCTTGGTAAGGGATTCAAGG+AGG | 0.659944 | 2.1:-1904430 | MS.gene23949:CDS |
| GAAACTGAGGAATTCTTCCG+AGG | 0.663978 | 2.1:-1904263 | MS.gene23949:CDS |
| AAGAATGTCAAATAGTTCCG+AGG | 0.664275 | 2.1:+1903300 | None:intergenic |
| CTTGAGTGGATATCATGCCA+AGG | 0.664717 | 2.1:+1903933 | None:intergenic |
| CCTGTTGAGGAGGTATTGGG+TGG | 0.671652 | 2.1:-1904809 | MS.gene23949:CDS |
| TTAACTTTGAGCAGAGATGG+AGG | 0.672683 | 2.1:-1903878 | MS.gene23949:CDS |
| ATCATCAGGGAAAGTTACTG+GGG | 0.676162 | 2.1:+1903791 | None:intergenic |
| GCATCTTCAAGCTCTCTCAG+AGG | 0.687558 | 2.1:+1903828 | None:intergenic |
| AGACTGGCAGAGGAGGACAA+TGG | 0.689150 | 2.1:-1903379 | MS.gene23949:CDS |
| CCCAATATACAACTTGCAGG+AGG | 0.700952 | 2.1:-1904557 | MS.gene23949:CDS |
| TCAAGGAGGCCAAAGCCAGG+AGG | 0.704971 | 2.1:-1904416 | MS.gene23949:CDS |
| TTTCTGATGATGAGTAAACA+TGG | 0.707021 | 2.1:+1904163 | None:intergenic |
| TGTATGTTGTGGTTCCCATG+TGG | 0.707881 | 2.1:-1903443 | MS.gene23949:CDS |
| ACTTAATATACATTACAGGG+TGG | 0.764594 | 2.1:-1904472 | MS.gene23949:CDS |
| TCGGAAAAGTGAATGAAACG+GGG | 0.795326 | 2.1:+1904037 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAAAATCAAATCTT+CGG | + | chr2.1:1903861-1903880 | None:intergenic | 10.0% |
| !! | ATATATTCATTTAGATTATT+AGG | - | chr2.1:1904281-1904300 | MS.gene23949:CDS | 10.0% |
| !! | TATATTCATTTAGATTATTA+GGG | - | chr2.1:1904282-1904301 | MS.gene23949:CDS | 10.0% |
| !! | AATAAAAGCCAAAAAAAAAA+AGG | + | chr2.1:1903268-1903287 | None:intergenic | 15.0% |
| !! | TAAAAAAAGTAAATCACTTT+AGG | - | chr2.1:1904097-1904116 | MS.gene23949:CDS | 15.0% |
| !!! | ATTTTTTGTGAAAAAGAAAA+AGG | - | chr2.1:1903875-1903894 | MS.gene23949:CDS | 15.0% |
| !!! | TTTTTTGTGAAAAAGAAAAA+GGG | - | chr2.1:1903876-1903895 | MS.gene23949:CDS | 15.0% |
| !! | AAAAGAACATTAAATGTGAT+TGG | + | chr2.1:1904009-1904028 | None:intergenic | 20.0% |
| !! | AGATTCAAATGAACAAATTA+AGG | + | chr2.1:1904387-1904406 | None:intergenic | 20.0% |
| !! | AGATTGTAAGAATGAAAAAA+GGG | - | chr2.1:1903907-1903926 | MS.gene23949:CDS | 20.0% |
| !! | ATCAAAAGAATAGATTGTTA+AGG | + | chr2.1:1904661-1904680 | None:intergenic | 20.0% |
| !! | ATTGAAAATCAATATTTCCT+TGG | - | chr2.1:1906399-1906418 | MS.gene23949:intron | 20.0% |
| !! | TAAACTCATAAATGTTTGAA+TGG | - | chr2.1:1903778-1903797 | MS.gene23949:CDS | 20.0% |
| !! | TAGATTGTAAGAATGAAAAA+AGG | - | chr2.1:1903906-1903925 | MS.gene23949:CDS | 20.0% |
| !!! | ATGTTTGATTTTAATTGTGA+AGG | - | chr2.1:1904337-1904356 | MS.gene23949:CDS | 20.0% |
| !!! | ATTCAATCTGAAATTTTGTT+AGG | - | chr2.1:1903583-1903602 | MS.gene23949:CDS | 20.0% |
| !!! | CTTTTCTTCCTTTTTTTTTT+TGG | - | chr2.1:1903257-1903276 | MS.gene23949:CDS | 20.0% |
| !!! | GAAACAAAAATATTTTCATC+AGG | + | chr2.1:1904796-1904815 | None:intergenic | 20.0% |
| !!! | GTTAGGTTAATTGTAATTTT+TGG | - | chr2.1:1903600-1903619 | MS.gene23949:CDS | 20.0% |
| !!! | TGTTTGATTTTAATTGTGAA+GGG | - | chr2.1:1904338-1904357 | MS.gene23949:CDS | 20.0% |
| ! | ATCTTTGAATTTCCATGAAT+TGG | + | chr2.1:1905250-1905269 | None:intergenic | 25.0% |
| ! | ATTGTCCAGAATATAGAAAT+TGG | - | chr2.1:1905799-1905818 | MS.gene23949:intron | 25.0% |
| ! | GATAAACTCAAGAATATTAG+TGG | - | chr2.1:1903209-1903228 | MS.gene23949:CDS | 25.0% |
| ! | TACTGTTGTAAATTTCTAAC+TGG | - | chr2.1:1904220-1904239 | MS.gene23949:CDS | 25.0% |
| ! | TGAAAGATGATAATCCTATT+GGG | - | chr2.1:1905128-1905147 | MS.gene23949:intron | 25.0% |
| ! | TTAGATAAGACAAAACTTTG+AGG | - | chr2.1:1904937-1904956 | MS.gene23949:CDS | 25.0% |
| ! | TTATAATATCGCCAATTGTA+TGG | - | chr2.1:1904162-1904181 | MS.gene23949:CDS | 25.0% |
| ! | TTATTTAATCCCACTTCATT+TGG | + | chr2.1:1905874-1905893 | None:intergenic | 25.0% |
| ! | TTCCTCTGTTAAAAAAAGAT+GGG | - | chr2.1:1905680-1905699 | MS.gene23949:intron | 25.0% |
| ! | TTTGTACCTTTATTACATGA+TGG | - | chr2.1:1904819-1904838 | MS.gene23949:CDS | 25.0% |
| !! | ATCTTAACCTTGTTCATTTT+AGG | - | chr2.1:1904679-1904698 | MS.gene23949:CDS | 25.0% |
| !! | GAAGGATAATTTTTCACTTT+TGG | - | chr2.1:1904841-1904860 | MS.gene23949:CDS | 25.0% |
| !! | TACTCATCATCAGAAAATTT+TGG | - | chr2.1:1905831-1905850 | MS.gene23949:intron | 25.0% |
| !! | TCTTAACCTTGTTCATTTTA+GGG | - | chr2.1:1904680-1904699 | MS.gene23949:CDS | 25.0% |
| !!! | CAAAAGGTCATTTTAATTTC+AGG | + | chr2.1:1904426-1904445 | None:intergenic | 25.0% |
| !!! | CATATGTGTTCATGTTTTTT+GGG | + | chr2.1:1904528-1904547 | None:intergenic | 25.0% |
| !!! | GATGGGATATTTTTAAGAAT+GGG | - | chr2.1:1904622-1904641 | MS.gene23949:CDS | 25.0% |
| !!! | TCATATGTGTTCATGTTTTT+TGG | + | chr2.1:1904529-1904548 | None:intergenic | 25.0% |
| !!! | TCTGTTATTTGTTTGTTGTA+CGG | - | chr2.1:1903343-1903362 | MS.gene23949:CDS | 25.0% |
| !!! | TGATGGGATATTTTTAAGAA+TGG | - | chr2.1:1904621-1904640 | MS.gene23949:CDS | 25.0% |
| AAACTCAAGAATATTAGTGG+TGG | - | chr2.1:1903212-1903231 | MS.gene23949:CDS | 30.0% | |
| ACTTAATATACATTACAGGG+TGG | - | chr2.1:1905515-1905534 | MS.gene23949:intron | 30.0% | |
| AGGCACTTAATATACATTAC+AGG | - | chr2.1:1905511-1905530 | MS.gene23949:intron | 30.0% | |
| ATATAATCTGAATCAGGTTC+TGG | + | chr2.1:1906768-1906787 | None:intergenic | 30.0% | |
| ATCAATGGTTGCATAAAGTT+TGG | + | chr2.1:1904990-1905009 | None:intergenic | 30.0% | |
| ATCCTTCCATCATGTAATAA+AGG | + | chr2.1:1904828-1904847 | None:intergenic | 30.0% | |
| ATGAACACATATGAACTCAA+AGG | - | chr2.1:1904535-1904554 | MS.gene23949:CDS | 30.0% | |
| ATTAGAAGTCCTAAATTTCC+TGG | - | chr2.1:1905325-1905344 | MS.gene23949:intron | 30.0% | |
| ATTTGCCCAAAAACTTCTAA+AGG | + | chr2.1:1904123-1904142 | None:intergenic | 30.0% | |
| CAGCTATTTAGATCTATTGA+CGG | - | chr2.1:1906237-1906256 | MS.gene23949:intron | 30.0% | |
| GAAAGATGATAATCCTATTG+GGG | - | chr2.1:1905129-1905148 | MS.gene23949:intron | 30.0% | |
| GGAAGGATAACATAATAGAT+AGG | - | chr2.1:1906322-1906341 | MS.gene23949:intron | 30.0% | |
| GGCACTTAATATACATTACA+GGG | - | chr2.1:1905512-1905531 | MS.gene23949:intron | 30.0% | |
| GGCGATATTATAAAAATCCA+AGG | + | chr2.1:1904155-1904174 | None:intergenic | 30.0% | |
| GTGAAAGATGATAATCCTAT+TGG | - | chr2.1:1905127-1905146 | MS.gene23949:intron | 30.0% | |
| GTGAATAAAGAACCAATTCA+TGG | - | chr2.1:1905235-1905254 | MS.gene23949:intron | 30.0% | |
| GTTCCTCTGTTAAAAAAAGA+TGG | - | chr2.1:1905679-1905698 | MS.gene23949:intron | 30.0% | |
| TCTTAAAAATATCCCATCAG+AGG | + | chr2.1:1904620-1904639 | None:intergenic | 30.0% | |
| TGTTTATACTGAGATTTCCT+TGG | - | chr2.1:1905540-1905559 | MS.gene23949:intron | 30.0% | |
| TTACTTACCTATCATCATCT+TGG | + | chr2.1:1906832-1906851 | None:intergenic | 30.0% | |
| ! | AAATGTTTGAATGGTAGTGA+AGG | - | chr2.1:1903787-1903806 | MS.gene23949:CDS | 30.0% |
| ! | ATCTTAAGTGAAAGCTCTTT+TGG | + | chr2.1:1906489-1906508 | None:intergenic | 30.0% |
| ! | GAGATTTGTTCTTTCAAACA+TGG | - | chr2.1:1903682-1903701 | MS.gene23949:CDS | 30.0% |
| ! | TACCTTTATTACATGATGGA+AGG | - | chr2.1:1904823-1904842 | MS.gene23949:CDS | 30.0% |
| ! | TAGGGTATTAATGCTTGTTT+GGG | - | chr2.1:1905642-1905661 | MS.gene23949:intron | 30.0% |
| ! | TCATCATCAGAAAATTTTGG+TGG | - | chr2.1:1905834-1905853 | MS.gene23949:intron | 30.0% |
| ! | TCTTAAGTGAAAGCTCTTTT+GGG | + | chr2.1:1906488-1906507 | None:intergenic | 30.0% |
| ! | TTAGGGTATTAATGCTTGTT+TGG | - | chr2.1:1905641-1905660 | MS.gene23949:intron | 30.0% |
| ! | TTTCTGATGATGAGTAAACA+TGG | + | chr2.1:1905827-1905846 | None:intergenic | 30.0% |
| !! | GTTAAAAAAAGATGGGTTGA+TGG | - | chr2.1:1905687-1905706 | MS.gene23949:intron | 30.0% |
| !! | TTAGGCCTTTAGAAGTTTTT+GGG | - | chr2.1:1904115-1904134 | MS.gene23949:CDS | 30.0% |
| !! | TTTAGGCCTTTAGAAGTTTT+TGG | - | chr2.1:1904114-1904133 | MS.gene23949:CDS | 30.0% |
| !!! | AACCCATCTTTTTTTAACAG+AGG | + | chr2.1:1905685-1905704 | None:intergenic | 30.0% |
| AAACAAAACATCCCAAGCAA+TGG | + | chr2.1:1906091-1906110 | None:intergenic | 35.0% | |
| AACAAAACATCCCAAGCAAT+GGG | + | chr2.1:1906090-1906109 | None:intergenic | 35.0% | |
| AACAAACCTGGATCTTTGTT+AGG | - | chr2.1:1904559-1904578 | MS.gene23949:CDS | 35.0% | |
| AACATAAATCATGAAACGCC+TGG | + | chr2.1:1906805-1906824 | None:intergenic | 35.0% | |
| AAGAATGTCAAATAGTTCCG+AGG | + | chr2.1:1906690-1906709 | None:intergenic | 35.0% | |
| AAGGACCAGAATCATAGAAA+AGG | - | chr2.1:1905030-1905049 | MS.gene23949:CDS | 35.0% | |
| AATAGAAAAAGGTGGTCCTA+GGG | - | chr2.1:1906029-1906048 | MS.gene23949:intron | 35.0% | |
| ACATAGCATATGCAGGATAA+AGG | + | chr2.1:1904500-1904519 | None:intergenic | 35.0% | |
| AGACCAGCTTAATGAACAAA+AGG | + | chr2.1:1904442-1904461 | None:intergenic | 35.0% | |
| AGTCTACCCTAAAATGAACA+AGG | + | chr2.1:1904689-1904708 | None:intergenic | 35.0% | |
| ATACTGAGATTTCCTTGGTA+AGG | - | chr2.1:1905545-1905564 | MS.gene23949:intron | 35.0% | |
| ATATGATATCCGATGCCAAA+TGG | + | chr2.1:1905102-1905121 | None:intergenic | 35.0% | |
| ATATTGGGGACAAAATTGTC+TGG | + | chr2.1:1905418-1905437 | None:intergenic | 35.0% | |
| ATGAACTTCTGTCTTATCCA+TGG | + | chr2.1:1903964-1903983 | None:intergenic | 35.0% | |
| ATGCACTTATGCTAAAACGA+AGG | + | chr2.1:1904726-1904745 | None:intergenic | 35.0% | |
| ATTGTTAGCAAGATTGAAGC+TGG | - | chr2.1:1906507-1906526 | MS.gene23949:intron | 35.0% | |
| CAAAAAATTGCAGCTTCACA+TGG | + | chr2.1:1905273-1905292 | None:intergenic | 35.0% | |
| CAGTTCAAGTCTTTCTGATA+AGG | + | chr2.1:1903757-1903776 | None:intergenic | 35.0% | |
| CTAACGCATGTAAACATAAG+TGG | + | chr2.1:1904771-1904790 | None:intergenic | 35.0% | |
| CTAGTTAGTTGGAAGGATAA+AGG | - | chr2.1:1903811-1903830 | MS.gene23949:CDS | 35.0% | |
| CTATTTAGATCTATTGACGG+TGG | - | chr2.1:1906240-1906259 | MS.gene23949:intron | 35.0% | |
| GATAAGACAGAAGTTCATCA+AGG | - | chr2.1:1903966-1903985 | MS.gene23949:CDS | 35.0% | |
| GGATAAAACATAGCATATGC+AGG | + | chr2.1:1904507-1904526 | None:intergenic | 35.0% | |
| GTTCGGAAAAGTGAATGAAA+CGG | + | chr2.1:1905955-1905974 | None:intergenic | 35.0% | |
| TAAGGAACTCCAGGAAATTT+AGG | + | chr2.1:1905337-1905356 | None:intergenic | 35.0% | |
| TACTCATGATCAAGAAACTG+AGG | - | chr2.1:1905711-1905730 | MS.gene23949:intron | 35.0% | |
| TACTGAGATTTCCTTGGTAA+GGG | - | chr2.1:1905546-1905565 | MS.gene23949:intron | 35.0% | |
| TATGATATCCGATGCCAAAT+GGG | + | chr2.1:1905101-1905120 | None:intergenic | 35.0% | |
| TATTGGGGACAAAATTGTCT+GGG | + | chr2.1:1905417-1905436 | None:intergenic | 35.0% | |
| TATTTGACATTCTTCTGCCT+TGG | - | chr2.1:1906696-1906715 | MS.gene23949:intron | 35.0% | |
| TCGTGCTTTCTCTAAATCAA+TGG | + | chr2.1:1905005-1905024 | None:intergenic | 35.0% | |
| TCTTCATGCTACAATCTTTG+AGG | - | chr2.1:1903184-1903203 | MS.gene23949:CDS | 35.0% | |
| TGAAAAGACTCATTCCATTG+AGG | + | chr2.1:1905067-1905086 | None:intergenic | 35.0% | |
| TGAATCTATTTGTCACCTGT+CGG | - | chr2.1:1904400-1904419 | MS.gene23949:CDS | 35.0% | |
| TGCACTTATGCTAAAACGAA+GGG | + | chr2.1:1904725-1904744 | None:intergenic | 35.0% | |
| TTCGGAAAAGTGAATGAAAC+GGG | + | chr2.1:1905954-1905973 | None:intergenic | 35.0% | |
| TTGATGCAATCACAAAAGCA+AGG | - | chr2.1:1905491-1905510 | MS.gene23949:intron | 35.0% | |
| TTGTTAGCAAGATTGAAGCT+GGG | - | chr2.1:1906508-1906527 | MS.gene23949:intron | 35.0% | |
| ! | AAAGGGAAAGTGTAAAGAGA+TGG | - | chr2.1:1903924-1903943 | MS.gene23949:CDS | 35.0% |
| ! | ACGCATTCAATCAGAAGTAT+CGG | - | chr2.1:1903467-1903486 | MS.gene23949:CDS | 35.0% |
| ! | ATGCTCCTTTTCTATGATTC+TGG | + | chr2.1:1905038-1905057 | None:intergenic | 35.0% |
| ! | CTCAAGAAAAAAGCACAAGA+AGG | - | chr2.1:1905616-1905635 | MS.gene23949:intron | 35.0% |
| ! | CTTTGTGTGTAGAAAGCATA+AGG | + | chr2.1:1905355-1905374 | None:intergenic | 35.0% |
| ! | TGACCTTTTGTTCATTAAGC+TGG | - | chr2.1:1904436-1904455 | MS.gene23949:CDS | 35.0% |
| ! | TGGTGCCAATTTCTATATTC+TGG | + | chr2.1:1905807-1905826 | None:intergenic | 35.0% |
| ! | TGTTTAACTTTGAGCAGAGA+TGG | - | chr2.1:1906106-1906125 | MS.gene23949:intron | 35.0% |
| !! | AAAAAGCACAAGAAGGTGTT+AGG | - | chr2.1:1905623-1905642 | MS.gene23949:intron | 35.0% |
| !! | AAAAGCACAAGAAGGTGTTA+GGG | - | chr2.1:1905624-1905643 | MS.gene23949:intron | 35.0% |
| !! | AGAATTGTGAGTTTTGTAGG+AGG | - | chr2.1:1905898-1905917 | MS.gene23949:intron | 35.0% |
| !! | AGATAGGTGGGTTGAAATAT+TGG | - | chr2.1:1905210-1905229 | MS.gene23949:intron | 35.0% |
| !! | CGAAGAATTGTGAGTTTTGT+AGG | - | chr2.1:1905895-1905914 | MS.gene23949:intron | 35.0% |
| !! | TCATCAGAAAATTTTGGTGG+TGG | - | chr2.1:1905837-1905856 | MS.gene23949:intron | 35.0% |
| !!! | ATTGTTTTTGCTCTCTGTGT+TGG | - | chr2.1:1904044-1904063 | MS.gene23949:CDS | 35.0% |
| !!! | TTTTAGGGTAGACTTTTGCT+TGG | - | chr2.1:1904695-1904714 | MS.gene23949:CDS | 35.0% |
| AAGGTTCACTGTGTATGTTG+TGG | - | chr2.1:1906533-1906552 | MS.gene23949:intron | 40.0% | |
| AATCGTGAGGTGGTAAAACA+AGG | - | chr2.1:1906720-1906739 | MS.gene23949:intron | 40.0% | |
| AATGTACGCCCTTCCAATTA+AGG | + | chr2.1:1905158-1905177 | None:intergenic | 40.0% | |
| ACCTCCTGCAAGTTGTATAT+TGG | + | chr2.1:1905434-1905453 | None:intergenic | 40.0% | |
| AGATTATATGCGAGCTCAAG+AGG | - | chr2.1:1906779-1906798 | MS.gene23949:CDS | 40.0% | |
| AGTGAGTTGCCAAATGAAGT+GGG | - | chr2.1:1905862-1905881 | MS.gene23949:intron | 40.0% | |
| ATATCGCCAATTGTATGGCT+AGG | - | chr2.1:1904167-1904186 | MS.gene23949:CDS | 40.0% | |
| ATCATCAGGGAAAGTTACTG+GGG | + | chr2.1:1906199-1906218 | None:intergenic | 40.0% | |
| ATGTTTCAAAAGACCGCAAC+TGG | - | chr2.1:1905293-1905312 | MS.gene23949:intron | 40.0% | |
| CAATAGAAAAAGGTGGTCCT+AGG | - | chr2.1:1906028-1906047 | MS.gene23949:intron | 40.0% | |
| CACAAACCTAACAAAGATCC+AGG | + | chr2.1:1904568-1904587 | None:intergenic | 40.0% | |
| CACACAAAGACAAGGTTGTA+AGG | - | chr2.1:1905366-1905385 | MS.gene23949:intron | 40.0% | |
| CAGTTCAGGCAATATTAGAC+TGG | - | chr2.1:1906592-1906611 | MS.gene23949:intron | 40.0% | |
| CCTCCTGCAAGTTGTATATT+GGG | + | chr2.1:1905433-1905452 | None:intergenic | 40.0% | |
| CCTGGTGCTTCAATAGAAAA+AGG | - | chr2.1:1906018-1906037 | MS.gene23949:intron | 40.0% | |
| CTAAAGCTGGGCTTATTAGT+GGG | - | chr2.1:1906301-1906320 | MS.gene23949:intron | 40.0% | |
| CTCCTGCAAGTTGTATATTG+GGG | + | chr2.1:1905432-1905451 | None:intergenic | 40.0% | |
| GAACTCAAAGGAAACAAACC+TGG | - | chr2.1:1904547-1904566 | MS.gene23949:CDS | 40.0% | |
| GATCATCAGGGAAAGTTACT+GGG | + | chr2.1:1906200-1906219 | None:intergenic | 40.0% | |
| GCTCGCATATAATCTGAATC+AGG | + | chr2.1:1906774-1906793 | None:intergenic | 40.0% | |
| GCTTTCTACACACAAAGACA+AGG | - | chr2.1:1905358-1905377 | MS.gene23949:intron | 40.0% | |
| GGTATTAAGCCTGAAGACAT+TGG | - | chr2.1:1906447-1906466 | MS.gene23949:intron | 40.0% | |
| GGTGCTTCAATAGAAAAAGG+TGG | - | chr2.1:1906021-1906040 | MS.gene23949:intron | 40.0% | |
| GTTCATGCCAAGATGATGAT+AGG | - | chr2.1:1906822-1906841 | MS.gene23949:CDS | 40.0% | |
| TAGAAGCCTAGCCATACAAT+TGG | + | chr2.1:1904176-1904195 | None:intergenic | 40.0% | |
| TAGAGATGAAGCCAAAACAG+TGG | + | chr2.1:1903636-1903655 | None:intergenic | 40.0% | |
| TCACATTTACTGTGCCCATT+TGG | - | chr2.1:1905084-1905103 | MS.gene23949:intron | 40.0% | |
| TCGGAAAAGTGAATGAAACG+GGG | + | chr2.1:1905953-1905972 | None:intergenic | 40.0% | |
| TGATCATCAGGGAAAGTTAC+TGG | + | chr2.1:1906201-1906220 | None:intergenic | 40.0% | |
| TGGTGAGGAAATAGATAGGT+GGG | - | chr2.1:1905198-1905217 | MS.gene23949:intron | 40.0% | |
| TGGTGGTAACATTCTTTCCA+AGG | - | chr2.1:1903229-1903248 | MS.gene23949:CDS | 40.0% | |
| TGTTAGCAAGATTGAAGCTG+GGG | - | chr2.1:1906509-1906528 | MS.gene23949:intron | 40.0% | |
| TGTTTCAAAAGACCGCAACT+GGG | - | chr2.1:1905294-1905313 | MS.gene23949:intron | 40.0% | |
| TTAACTTTGAGCAGAGATGG+AGG | - | chr2.1:1906109-1906128 | MS.gene23949:intron | 40.0% | |
| TTACCAGCCTCATAGATGTT+GGG | - | chr2.1:1905459-1905478 | MS.gene23949:intron | 40.0% | |
| TTTCATCAGCCTAACTTTCC+TGG | - | chr2.1:1906000-1906019 | MS.gene23949:intron | 40.0% | |
| TTTCCTTGGTAAGGGATTCA+AGG | - | chr2.1:1905554-1905573 | MS.gene23949:intron | 40.0% | |
| TTTGAGGAGACAGTTGGATT+CGG | - | chr2.1:1904953-1904972 | MS.gene23949:CDS | 40.0% | |
| ! | AAGTGTAAAGAGATGGTGGT+TGG | - | chr2.1:1903931-1903950 | MS.gene23949:CDS | 40.0% |
| ! | AGGAGCATGTTAATCCTCAA+TGG | - | chr2.1:1905050-1905069 | MS.gene23949:intron | 40.0% |
| ! | AGTGTAAAGAGATGGTGGTT+GGG | - | chr2.1:1903932-1903951 | MS.gene23949:CDS | 40.0% |
| ! | ATTGAAGCACCAGGAAAGTT+AGG | + | chr2.1:1906012-1906031 | None:intergenic | 40.0% |
| ! | ATTGAAGCACTCAATGCCAA+GGG | - | chr2.1:1906651-1906670 | MS.gene23949:intron | 40.0% |
| ! | CAAAACTTTGAGGAGACAGT+TGG | - | chr2.1:1904947-1904966 | MS.gene23949:CDS | 40.0% |
| ! | GATTTAGAGAAAGCACGAGT+GGG | - | chr2.1:1905007-1905026 | MS.gene23949:CDS | 40.0% |
| ! | GTAGAGTTTTGCCACTGTTT+TGG | - | chr2.1:1903622-1903641 | MS.gene23949:CDS | 40.0% |
| ! | TAGAAAGCATAAGGAACTCC+AGG | + | chr2.1:1905346-1905365 | None:intergenic | 40.0% |
| ! | TATTGAAGCACTCAATGCCA+AGG | - | chr2.1:1906650-1906669 | MS.gene23949:intron | 40.0% |
| ! | TGATTTAGAGAAAGCACGAG+TGG | - | chr2.1:1905006-1905025 | MS.gene23949:CDS | 40.0% |
| ! | TGTCTGGGATATGAGAATCT+TGG | + | chr2.1:1905402-1905421 | None:intergenic | 40.0% |
| ! | TGTTTGGGATGATAGAACGT+CGG | - | chr2.1:1905657-1905676 | MS.gene23949:intron | 40.0% |
| !! | AAGGAAGAAAAGAAGCACCT+TGG | + | chr2.1:1903249-1903268 | None:intergenic | 40.0% |
| !! | ATTCCTGTTGAGGAGGTATT+GGG | - | chr2.1:1905175-1905194 | MS.gene23949:intron | 40.0% |
| !! | CCTTTTTCTATTGAAGCACC+AGG | + | chr2.1:1906021-1906040 | None:intergenic | 40.0% |
| !! | GTAGTGAAGGACTAGTTAGT+TGG | - | chr2.1:1903800-1903819 | MS.gene23949:CDS | 40.0% |
| !! | TCATTCACTTTTCCGAACTC+TGG | - | chr2.1:1905957-1905976 | MS.gene23949:intron | 40.0% |
| !! | TGAAGGACTAGTTAGTTGGA+AGG | - | chr2.1:1903804-1903823 | MS.gene23949:CDS | 40.0% |
| !!! | CATTTTAATTTCAGGCCGAC+AGG | + | chr2.1:1904418-1904437 | None:intergenic | 40.0% |
| ACAATGCTTCCACCATCATC+CGG | + | chr2.1:1905784-1905803 | None:intergenic | 45.0% | |
| ACAATTGACAACGACGCACA+TGG | + | chr2.1:1904878-1904897 | None:intergenic | 45.0% | |
| ACATCCTCCCAACATCTATG+AGG | + | chr2.1:1905469-1905488 | None:intergenic | 45.0% | |
| ACGACGCACATGGGAAATAA+AGG | + | chr2.1:1904868-1904887 | None:intergenic | 45.0% | |
| ACTCAATGCCAAGGGAATTG+AGG | - | chr2.1:1906659-1906678 | MS.gene23949:intron | 45.0% | |
| AGGATCTTCCTCAATTCCCT+TGG | + | chr2.1:1906670-1906689 | None:intergenic | 45.0% | |
| AGGCAATATTAGACTGGCAG+AGG | - | chr2.1:1906598-1906617 | MS.gene23949:intron | 45.0% | |
| AGGGAATTGAGGAAGATCCT+CGG | - | chr2.1:1906670-1906689 | MS.gene23949:intron | 45.0% | |
| ATATCATGCCAAGGTTCCCT+AGG | + | chr2.1:1906048-1906067 | None:intergenic | 45.0% | |
| ATCCTTATCGAAGCCTCTGA+TGG | - | chr2.1:1904604-1904623 | MS.gene23949:CDS | 45.0% | |
| ATGGCGCAAATTCTGCTACA+TGG | - | chr2.1:1903158-1903177 | MS.gene23949:CDS | 45.0% | |
| CAATATTAGACTGGCAGAGG+AGG | - | chr2.1:1906601-1906620 | MS.gene23949:intron | 45.0% | |
| CAATTGACAACGACGCACAT+GGG | + | chr2.1:1904877-1904896 | None:intergenic | 45.0% | |
| CAGTGAGTTGCCAAATGAAG+TGG | - | chr2.1:1905861-1905880 | MS.gene23949:intron | 45.0% | |
| CCAATTAAGGTTGCCCCAAT+AGG | + | chr2.1:1905145-1905164 | None:intergenic | 45.0% | |
| CCCAATATACAACTTGCAGG+AGG | - | chr2.1:1905430-1905449 | MS.gene23949:intron | 45.0% | |
| CCTATTGGGGCAACCTTAAT+TGG | - | chr2.1:1905142-1905161 | MS.gene23949:intron | 45.0% | |
| CCTGAACTGATGCACTTTCT+GGG | + | chr2.1:1906581-1906600 | None:intergenic | 45.0% | |
| CTGAAGATGCTGCTAAAGCT+GGG | - | chr2.1:1906289-1906308 | MS.gene23949:intron | 45.0% | |
| CTTACCAGCCTCATAGATGT+TGG | - | chr2.1:1905458-1905477 | MS.gene23949:intron | 45.0% | |
| CTTGAGTGGATATCATGCCA+AGG | + | chr2.1:1906057-1906076 | None:intergenic | 45.0% | |
| CTTGGCATGATATCCACTCA+AGG | - | chr2.1:1906055-1906074 | MS.gene23949:intron | 45.0% | |
| GAAACTGAGGAATTCTTCCG+AGG | - | chr2.1:1905724-1905743 | MS.gene23949:intron | 45.0% | |
| GAGACAGTTGGATTCGGAAA+AGG | - | chr2.1:1904959-1904978 | MS.gene23949:CDS | 45.0% | |
| GATATCCACTCAAGGCTTGA+AGG | - | chr2.1:1906063-1906082 | MS.gene23949:intron | 45.0% | |
| GCTAAAGCTGGGCTTATTAG+TGG | - | chr2.1:1906300-1906319 | MS.gene23949:intron | 45.0% | |
| GGGCAAATGATTCATCACCT+TGG | - | chr2.1:1904135-1904154 | MS.gene23949:CDS | 45.0% | |
| GTCCCCAATATACAACTTGC+AGG | - | chr2.1:1905427-1905446 | MS.gene23949:intron | 45.0% | |
| GTGGTGAGGAAATAGATAGG+TGG | - | chr2.1:1905197-1905216 | MS.gene23949:intron | 45.0% | |
| TACTGGGGATGGGGTAATAA+TGG | + | chr2.1:1906184-1906203 | None:intergenic | 45.0% | |
| TCCACGTCTCTTGATCATCA+GGG | + | chr2.1:1906212-1906231 | None:intergenic | 45.0% | |
| TCCTTATCGAAGCCTCTGAT+GGG | - | chr2.1:1904605-1904624 | MS.gene23949:CDS | 45.0% | |
| TGGGGCAACCTTAATTGGAA+GGG | - | chr2.1:1905147-1905166 | MS.gene23949:intron | 45.0% | |
| TGGGTGGTGAGGAAATAGAT+AGG | - | chr2.1:1905194-1905213 | MS.gene23949:intron | 45.0% | |
| TGTATGTTGTGGTTCCCATG+TGG | - | chr2.1:1906544-1906563 | MS.gene23949:intron | 45.0% | |
| TTACTGTGCCCATTTGGCAT+CGG | - | chr2.1:1905090-1905109 | MS.gene23949:intron | 45.0% | |
| TTCCACGTCTCTTGATCATC+AGG | + | chr2.1:1906213-1906232 | None:intergenic | 45.0% | |
| TTGGGGCAACCTTAATTGGA+AGG | - | chr2.1:1905146-1905165 | MS.gene23949:intron | 45.0% | |
| ! | AAAGAGATGGTGGTTGGGAT+TGG | - | chr2.1:1903937-1903956 | MS.gene23949:CDS | 45.0% |
| ! | CATTCCTGTTGAGGAGGTAT+TGG | - | chr2.1:1905174-1905193 | MS.gene23949:intron | 45.0% |
| ! | GAATCAGGTTCTGGTCTTTC+AGG | + | chr2.1:1906759-1906778 | None:intergenic | 45.0% |
| ! | GGGAAAGTGTAAAGAGATGG+TGG | - | chr2.1:1903927-1903946 | MS.gene23949:CDS | 45.0% |
| ! | TGCAAAGCACCAATGTCTTC+AGG | + | chr2.1:1906459-1906478 | None:intergenic | 45.0% |
| AGCAGCATCTTCAGGAGTCT+CGG | + | chr2.1:1906283-1906302 | None:intergenic | 50.0% | |
| AGCTGGGCTTATTAGTGGGA+AGG | - | chr2.1:1906305-1906324 | MS.gene23949:intron | 50.0% | |
| AGGGAAAGTTACTGGGGATG+GGG | + | chr2.1:1906193-1906212 | None:intergenic | 50.0% | |
| ATGGAGGAAGCAAGGTGGAA+AGG | - | chr2.1:1906125-1906144 | MS.gene23949:intron | 50.0% | |
| ATTGACGGTGGAGCAGCTTT+CGG | - | chr2.1:1906252-1906271 | MS.gene23949:intron | 50.0% | |
| CAGGGAAAGTTACTGGGGAT+GGG | + | chr2.1:1906194-1906213 | None:intergenic | 50.0% | |
| CCTCCTTGAATCCCTTACCA+AGG | + | chr2.1:1905560-1905579 | None:intergenic | 50.0% | |
| CCTGAAGATGCTGCTAAAGC+TGG | - | chr2.1:1906288-1906307 | MS.gene23949:intron | 50.0% | |
| CCTTGGTAAGGGATTCAAGG+AGG | - | chr2.1:1905557-1905576 | MS.gene23949:intron | 50.0% | |
| GATGTGCTGTGTCCAGAGTT+CGG | + | chr2.1:1905972-1905991 | None:intergenic | 50.0% | |
| GCAAGATTGAAGCTGGGGAA+AGG | - | chr2.1:1906514-1906533 | MS.gene23949:intron | 50.0% | |
| GCATCTTCAAGCTCTCTCAG+AGG | + | chr2.1:1906162-1906181 | None:intergenic | 50.0% | |
| GCCTGAACTGATGCACTTTC+TGG | + | chr2.1:1906582-1906601 | None:intergenic | 50.0% | |
| GCTTGAAGGTCCCATTGCTT+GGG | - | chr2.1:1906077-1906096 | MS.gene23949:intron | 50.0% | |
| TAATGCCTAGAGCCCAGTTG+CGG | + | chr2.1:1905309-1905328 | None:intergenic | 50.0% | |
| TCAGGGAAAGTTACTGGGGA+TGG | + | chr2.1:1906195-1906214 | None:intergenic | 50.0% | |
| TCCACGCATAGCAACTTCCA+AGG | + | chr2.1:1906419-1906438 | None:intergenic | 50.0% | |
| TCCCATCAGAGGCTTCGATA+AGG | + | chr2.1:1904609-1904628 | None:intergenic | 50.0% | |
| TCCCTGATGATCAAGAGACG+TGG | - | chr2.1:1906208-1906227 | MS.gene23949:intron | 50.0% | |
| TCCTTGGAAGTTGCTATGCG+TGG | - | chr2.1:1906415-1906434 | MS.gene23949:intron | 50.0% | |
| TGTCTTATGCCCTCGCAATC+CGG | - | chr2.1:1905762-1905781 | MS.gene23949:intron | 50.0% | |
| TTACCACCTCACGATTGCCA+AGG | + | chr2.1:1906716-1906735 | None:intergenic | 50.0% | |
| ! | AAGGGCGTACATTCCTGTTG+AGG | - | chr2.1:1905165-1905184 | MS.gene23949:intron | 50.0% |
| ! | CCAGCTTTAGCAGCATCTTC+AGG | + | chr2.1:1906291-1906310 | None:intergenic | 50.0% |
| ! | CCCAGAAAGTGCATCAGTTC+AGG | - | chr2.1:1906578-1906597 | MS.gene23949:intron | 50.0% |
| ! | TAGAGAAAGCACGAGTGGGA+AGG | - | chr2.1:1905011-1905030 | MS.gene23949:CDS | 50.0% |
| ! | TCAGGTTCTGGTCTTTCAGG+AGG | + | chr2.1:1906756-1906775 | None:intergenic | 50.0% |
| !! | GGAGGCATTGATCTCTGTGA+TGG | - | chr2.1:1905916-1905935 | MS.gene23949:intron | 50.0% |
| !! | TGAAGCACTGACACAGACAC+CGG | - | chr2.1:1903375-1903394 | MS.gene23949:CDS | 50.0% |
| AAAGACCGCAACTGGGCTCT+AGG | - | chr2.1:1905301-1905320 | MS.gene23949:intron | 55.0% | |
| AAGGTGGTCCTAGGGAACCT+TGG | - | chr2.1:1906037-1906056 | MS.gene23949:intron | 55.0% | |
| AGACTGGCAGAGGAGGACAA+TGG | - | chr2.1:1906608-1906627 | MS.gene23949:intron | 55.0% | |
| ATATGCGAGCTCAAGAGGCC+AGG | - | chr2.1:1906784-1906803 | MS.gene23949:CDS | 55.0% | |
| CACAGTGCACTTCAGAGCCT+CGG | + | chr2.1:1905744-1905763 | None:intergenic | 55.0% | |
| CACCATCATCCGGATTGCGA+GGG | + | chr2.1:1905774-1905793 | None:intergenic | 55.0% | |
| CAGAGATGGAGGAAGCAAGG+TGG | - | chr2.1:1906120-1906139 | MS.gene23949:intron | 55.0% | |
| CAGCATCTTCAGGAGTCTCG+GGG | + | chr2.1:1906281-1906300 | None:intergenic | 55.0% | |
| CCAAGTGTGATGTCTCCTCC+TGG | + | chr2.1:1905589-1905608 | None:intergenic | 55.0% | |
| CCACCCAATACCTCCTCAAC+AGG | + | chr2.1:1905181-1905200 | None:intergenic | 55.0% | |
| CCAGCCTCATAGATGTTGGG+AGG | - | chr2.1:1905462-1905481 | MS.gene23949:intron | 55.0% | |
| CCAGGAGGAGACATCACACT+TGG | - | chr2.1:1905586-1905605 | MS.gene23949:intron | 55.0% | |
| CCTCCCAACATCTATGAGGC+TGG | + | chr2.1:1905465-1905484 | None:intergenic | 55.0% | |
| CTTCTGCCTTGGCAATCGTG+AGG | - | chr2.1:1906707-1906726 | MS.gene23949:intron | 55.0% | |
| GAGCAGAGATGGAGGAAGCA+AGG | - | chr2.1:1906117-1906136 | MS.gene23949:intron | 55.0% | |
| GATTCAAGGAGGCCAAAGCC+AGG | - | chr2.1:1905568-1905587 | MS.gene23949:intron | 55.0% | |
| GCAGCATCTTCAGGAGTCTC+GGG | + | chr2.1:1906282-1906301 | None:intergenic | 55.0% | |
| GGCGTACATTCCTGTTGAGG+AGG | - | chr2.1:1905168-1905187 | MS.gene23949:intron | 55.0% | |
| GGCTTGAAGGTCCCATTGCT+TGG | - | chr2.1:1906076-1906095 | MS.gene23949:intron | 55.0% | |
| GTGATGTCTCCTCCTGGCTT+TGG | + | chr2.1:1905583-1905602 | None:intergenic | 55.0% | |
| TGGGACCTTCAAGCCTTGAG+TGG | + | chr2.1:1906071-1906090 | None:intergenic | 55.0% | |
| TTGACGGTGGAGCAGCTTTC+GGG | - | chr2.1:1906253-1906272 | MS.gene23949:intron | 55.0% | |
| !! | CCTGTTGAGGAGGTATTGGG+TGG | - | chr2.1:1905178-1905197 | MS.gene23949:intron | 55.0% |
| !! | TGAGGAGGTATTGGGTGGTG+AGG | - | chr2.1:1905183-1905202 | MS.gene23949:intron | 55.0% |
| !! | TGCTATGCGTGGAGTGCTGA+TGG | - | chr2.1:1906426-1906445 | MS.gene23949:intron | 55.0% |
| !! | TGGTGGTTGGGATTGGTCCA+TGG | - | chr2.1:1903944-1903963 | MS.gene23949:CDS | 55.0% |
| CCACCATCATCCGGATTGCG+AGG | + | chr2.1:1905775-1905794 | None:intergenic | 60.0% | |
| CTGCCTTGGCAATCGTGAGG+TGG | - | chr2.1:1906710-1906729 | MS.gene23949:intron | 60.0% | |
| GTGGTTCCCATGTGGCCTGA+GGG | - | chr2.1:1906552-1906571 | MS.gene23949:intron | 60.0% | |
| TCAAGGAGGCCAAAGCCAGG+AGG | - | chr2.1:1905571-1905590 | MS.gene23949:intron | 60.0% | |
| TGACACAGACACCGGACGGA+TGG | - | chr2.1:1903383-1903402 | MS.gene23949:CDS | 60.0% | |
| TGCCCTCGCAATCCGGATGA+TGG | - | chr2.1:1905769-1905788 | MS.gene23949:intron | 60.0% | |
| TGCTGACGTGTCCATCCGTC+CGG | + | chr2.1:1903397-1903416 | None:intergenic | 60.0% | |
| TGTGGTTCCCATGTGGCCTG+AGG | - | chr2.1:1906551-1906570 | MS.gene23949:intron | 60.0% | |
| ! | CCTCGCAATCCGGATGATGG+TGG | - | chr2.1:1905772-1905791 | MS.gene23949:intron | 60.0% |
| ! | GCACTGACACAGACACCGGA+CGG | - | chr2.1:1903379-1903398 | MS.gene23949:CDS | 60.0% |
| !! | GCACTTTCTGGGACACCCTC+AGG | + | chr2.1:1906570-1906589 | None:intergenic | 60.0% |
| GGGACACCCTCAGGCCACAT+GGG | + | chr2.1:1906561-1906580 | None:intergenic | 65.0% | |
| TGGGACACCCTCAGGCCACA+TGG | + | chr2.1:1906562-1906581 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 1903158 | 1906851 | 1903158 | ID=MS.gene23949 |
| chr2.1 | mRNA | 1903158 | 1906851 | 1903158 | ID=MS.gene23949.t1;Parent=MS.gene23949 |
| chr2.1 | exon | 1906759 | 1906851 | 1906759 | ID=MS.gene23949.t1.exon1;Parent=MS.gene23949.t1 |
| chr2.1 | CDS | 1906759 | 1906851 | 1906759 | ID=cds.MS.gene23949.t1;Parent=MS.gene23949.t1 |
| chr2.1 | exon | 1903158 | 1905068 | 1903158 | ID=MS.gene23949.t1.exon2;Parent=MS.gene23949.t1 |
| chr2.1 | CDS | 1903158 | 1905068 | 1903158 | ID=cds.MS.gene23949.t1;Parent=MS.gene23949.t1 |
| Gene Sequence |
| Protein sequence |