Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene24034.t1 | XP_013468377.1 | 89.8 | 547 | 42 | 3 | 1 | 546 | 1 | 534 | 9.20E-254 | 885.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene24034.t1 | Q8GZM7 | 31.4 | 557 | 289 | 16 | 1 | 546 | 1 | 475 | 8.7e-35 | 149.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene24034.t1 | A0A072VK93 | 89.8 | 547 | 42 | 3 | 1 | 546 | 1 | 534 | 6.6e-254 | 885.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene24034.t1 | TF | bHLH |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050060 | MS.gene24034 | 0.802989 | 4.32E-49 | -1.69E-46 |
MS.gene052340 | MS.gene24034 | 0.814835 | 1.26E-51 | -1.69E-46 |
MS.gene053449 | MS.gene24034 | 0.817895 | 2.60E-52 | -1.69E-46 |
MS.gene05553 | MS.gene24034 | 0.817744 | 2.81E-52 | -1.69E-46 |
MS.gene057124 | MS.gene24034 | 0.804342 | 2.26E-49 | -1.69E-46 |
MS.gene057396 | MS.gene24034 | 0.819542 | 1.10E-52 | -1.69E-46 |
MS.gene059011 | MS.gene24034 | 0.87166 | 5.77E-67 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene24034.t1 | MTR_1g069155 | 93.053 | 547 | 24 | 3 | 1 | 546 | 1 | 534 | 0.0 | 1008 |
MS.gene24034.t1 | MTR_7g099540 | 65.538 | 325 | 79 | 13 | 217 | 534 | 151 | 449 | 4.07e-113 | 344 |
MS.gene24034.t1 | MTR_7g099540 | 63.690 | 336 | 83 | 14 | 212 | 534 | 146 | 455 | 1.76e-110 | 337 |
MS.gene24034.t1 | MTR_3g449770 | 30.824 | 558 | 268 | 21 | 1 | 527 | 1 | 471 | 3.76e-54 | 191 |
MS.gene24034.t1 | MTR_1g084980 | 60.403 | 149 | 55 | 2 | 267 | 411 | 398 | 546 | 1.38e-42 | 162 |
MS.gene24034.t1 | MTR_7g111320 | 50.867 | 173 | 73 | 3 | 272 | 432 | 373 | 545 | 2.14e-35 | 141 |
MS.gene24034.t1 | MTR_1g019240 | 67.949 | 78 | 23 | 1 | 329 | 404 | 85 | 162 | 2.04e-26 | 108 |
MS.gene24034.t1 | MTR_7g110810 | 56.000 | 100 | 40 | 1 | 299 | 394 | 168 | 267 | 1.14e-24 | 106 |
MS.gene24034.t1 | MTR_5g017040 | 74.627 | 67 | 15 | 1 | 338 | 402 | 114 | 180 | 5.25e-24 | 103 |
MS.gene24034.t1 | MTR_1g084980 | 47.656 | 128 | 62 | 2 | 267 | 392 | 398 | 522 | 1.38e-23 | 105 |
MS.gene24034.t1 | MTR_4g131160 | 40.945 | 127 | 57 | 3 | 280 | 398 | 153 | 269 | 2.08e-18 | 87.8 |
MS.gene24034.t1 | MTR_4g131160 | 40.945 | 127 | 57 | 3 | 280 | 398 | 156 | 272 | 2.28e-18 | 87.8 |
MS.gene24034.t1 | MTR_1g080890 | 48.101 | 79 | 37 | 1 | 331 | 405 | 195 | 273 | 3.67e-17 | 83.6 |
MS.gene24034.t1 | MTR_1g017350 | 41.071 | 112 | 55 | 5 | 331 | 437 | 262 | 367 | 5.67e-16 | 80.5 |
MS.gene24034.t1 | MTR_1g017350 | 41.071 | 112 | 55 | 5 | 331 | 437 | 262 | 367 | 6.33e-16 | 80.5 |
MS.gene24034.t1 | MTR_3g116770 | 36.923 | 130 | 72 | 5 | 331 | 452 | 193 | 320 | 8.43e-16 | 79.7 |
MS.gene24034.t1 | MTR_3g116770 | 36.923 | 130 | 72 | 5 | 331 | 452 | 193 | 320 | 8.52e-16 | 79.7 |
MS.gene24034.t1 | MTR_1g017350 | 40.000 | 115 | 55 | 5 | 331 | 437 | 262 | 370 | 1.33e-15 | 79.3 |
MS.gene24034.t1 | MTR_1g017350 | 40.000 | 115 | 55 | 5 | 331 | 437 | 262 | 370 | 1.46e-15 | 79.3 |
MS.gene24034.t1 | MTR_8g062240 | 46.341 | 82 | 42 | 2 | 331 | 410 | 153 | 234 | 7.34e-15 | 75.5 |
MS.gene24034.t1 | MTR_7g053410 | 50.725 | 69 | 33 | 1 | 331 | 398 | 319 | 387 | 1.84e-14 | 76.3 |
MS.gene24034.t1 | MTR_5g037250 | 45.122 | 82 | 43 | 2 | 331 | 410 | 114 | 195 | 2.22e-14 | 73.2 |
MS.gene24034.t1 | MTR_8g012290 | 38.793 | 116 | 52 | 3 | 297 | 393 | 241 | 356 | 2.30e-14 | 75.9 |
MS.gene24034.t1 | MTR_7g053410 | 50.725 | 69 | 33 | 1 | 331 | 398 | 319 | 387 | 2.33e-14 | 76.3 |
MS.gene24034.t1 | MTR_8g012290 | 38.793 | 116 | 52 | 3 | 297 | 393 | 241 | 356 | 2.35e-14 | 75.9 |
MS.gene24034.t1 | MTR_3g498825 | 49.315 | 73 | 36 | 1 | 331 | 402 | 149 | 221 | 2.39e-14 | 74.7 |
MS.gene24034.t1 | MTR_4g070320 | 54.688 | 64 | 28 | 1 | 331 | 393 | 145 | 208 | 2.69e-14 | 74.7 |
MS.gene24034.t1 | MTR_5g048860 | 54.688 | 64 | 28 | 1 | 331 | 393 | 367 | 430 | 5.45e-14 | 75.1 |
MS.gene24034.t1 | MTR_8g065740 | 54.688 | 64 | 28 | 1 | 331 | 393 | 307 | 370 | 5.57e-14 | 74.7 |
MS.gene24034.t1 | MTR_5g005110 | 29.348 | 184 | 100 | 6 | 258 | 440 | 170 | 324 | 9.00e-14 | 73.2 |
MS.gene24034.t1 | MTR_8g099880 | 45.946 | 74 | 38 | 2 | 331 | 402 | 147 | 220 | 1.10e-13 | 72.8 |
MS.gene24034.t1 | MTR_1g059270 | 39.773 | 88 | 51 | 2 | 331 | 416 | 162 | 249 | 1.15e-13 | 72.8 |
MS.gene24034.t1 | MTR_1g106470 | 34.286 | 105 | 55 | 2 | 323 | 422 | 185 | 280 | 4.80e-13 | 70.1 |
MS.gene24034.t1 | MTR_3g103030 | 32.727 | 110 | 59 | 2 | 327 | 436 | 227 | 321 | 8.69e-13 | 70.1 |
MS.gene24034.t1 | MTR_1g059270 | 44.928 | 69 | 37 | 1 | 331 | 398 | 162 | 230 | 2.16e-12 | 67.8 |
MS.gene24034.t1 | MTR_7g092510 | 37.037 | 108 | 65 | 3 | 331 | 435 | 175 | 282 | 4.97e-12 | 67.8 |
MS.gene24034.t1 | MTR_1g018090 | 45.455 | 66 | 36 | 0 | 327 | 392 | 272 | 337 | 6.99e-12 | 67.4 |
MS.gene24034.t1 | MTR_6g084120 | 45.833 | 72 | 38 | 1 | 316 | 386 | 142 | 213 | 1.77e-11 | 65.1 |
MS.gene24034.t1 | MTR_1g106460 | 31.313 | 99 | 59 | 1 | 326 | 424 | 235 | 324 | 3.88e-11 | 65.1 |
MS.gene24034.t1 | MTR_7g039110 | 58.182 | 55 | 20 | 1 | 313 | 367 | 284 | 335 | 6.43e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene24034.t1 | AT2G20180 | 39.890 | 544 | 205 | 24 | 1 | 520 | 1 | 446 | 7.92e-77 | 251 |
MS.gene24034.t1 | AT2G20180 | 39.890 | 544 | 205 | 24 | 1 | 520 | 1 | 446 | 7.92e-77 | 251 |
MS.gene24034.t1 | AT2G20180 | 39.890 | 544 | 205 | 24 | 1 | 520 | 1 | 446 | 7.92e-77 | 251 |
MS.gene24034.t1 | AT2G20180 | 39.890 | 544 | 205 | 24 | 1 | 520 | 1 | 446 | 7.92e-77 | 251 |
MS.gene24034.t1 | AT2G20180 | 40.708 | 452 | 165 | 18 | 86 | 520 | 10 | 375 | 1.05e-65 | 219 |
MS.gene24034.t1 | AT2G20180 | 40.708 | 452 | 165 | 18 | 86 | 520 | 10 | 375 | 1.05e-65 | 219 |
MS.gene24034.t1 | AT2G20180 | 40.708 | 452 | 165 | 18 | 86 | 520 | 10 | 375 | 1.05e-65 | 219 |
MS.gene24034.t1 | AT2G20180 | 38.835 | 412 | 157 | 19 | 1 | 390 | 1 | 339 | 1.40e-55 | 191 |
MS.gene24034.t1 | AT4G28800 | 31.791 | 497 | 227 | 16 | 29 | 515 | 17 | 411 | 1.86e-52 | 185 |
MS.gene24034.t1 | AT4G28800 | 31.463 | 499 | 226 | 17 | 26 | 515 | 26 | 417 | 1.56e-48 | 175 |
MS.gene24034.t1 | AT4G28790 | 33.645 | 428 | 198 | 14 | 23 | 436 | 16 | 371 | 2.17e-45 | 165 |
MS.gene24034.t1 | AT4G28811 | 33.333 | 522 | 242 | 19 | 31 | 537 | 108 | 538 | 1.42e-39 | 152 |
MS.gene24034.t1 | AT1G09530 | 33.489 | 427 | 204 | 15 | 32 | 413 | 27 | 418 | 1.75e-39 | 151 |
MS.gene24034.t1 | AT1G09530 | 33.489 | 427 | 204 | 15 | 32 | 413 | 27 | 418 | 1.75e-39 | 151 |
MS.gene24034.t1 | AT1G09530 | 33.489 | 427 | 204 | 15 | 32 | 413 | 27 | 418 | 1.75e-39 | 151 |
MS.gene24034.t1 | AT1G09530 | 33.489 | 427 | 204 | 15 | 32 | 413 | 27 | 418 | 1.75e-39 | 151 |
MS.gene24034.t1 | AT1G09530 | 33.489 | 427 | 204 | 15 | 32 | 413 | 27 | 418 | 1.75e-39 | 151 |
MS.gene24034.t1 | AT1G09530 | 33.489 | 427 | 204 | 15 | 32 | 413 | 27 | 418 | 1.75e-39 | 151 |
MS.gene24034.t1 | AT4G28790 | 31.915 | 376 | 187 | 10 | 23 | 389 | 16 | 331 | 1.14e-34 | 134 |
MS.gene24034.t1 | AT2G46970 | 52.206 | 136 | 52 | 3 | 295 | 425 | 155 | 282 | 5.59e-31 | 124 |
MS.gene24034.t1 | AT2G46970 | 52.206 | 136 | 52 | 3 | 295 | 425 | 186 | 313 | 7.26e-31 | 125 |
MS.gene24034.t1 | AT2G46970 | 52.206 | 136 | 52 | 3 | 295 | 425 | 164 | 291 | 7.70e-31 | 124 |
MS.gene24034.t1 | AT4G28815 | 40.306 | 196 | 65 | 7 | 326 | 521 | 65 | 208 | 1.41e-30 | 119 |
MS.gene24034.t1 | AT4G28815 | 40.306 | 196 | 65 | 7 | 326 | 521 | 141 | 284 | 9.56e-30 | 119 |
MS.gene24034.t1 | AT3G59060 | 40.435 | 230 | 117 | 7 | 295 | 508 | 211 | 436 | 4.79e-29 | 120 |
MS.gene24034.t1 | AT3G59060 | 40.435 | 230 | 117 | 7 | 295 | 508 | 211 | 436 | 4.79e-29 | 120 |
MS.gene24034.t1 | AT3G59060 | 40.435 | 230 | 117 | 7 | 295 | 508 | 211 | 436 | 4.79e-29 | 120 |
MS.gene24034.t1 | AT3G59060 | 52.482 | 141 | 52 | 4 | 295 | 420 | 211 | 351 | 1.46e-28 | 118 |
MS.gene24034.t1 | AT5G67110 | 55.446 | 101 | 41 | 2 | 307 | 405 | 67 | 165 | 7.82e-26 | 105 |
MS.gene24034.t1 | AT4G36930 | 73.611 | 72 | 17 | 1 | 335 | 404 | 197 | 268 | 1.11e-25 | 109 |
MS.gene24034.t1 | AT2G43010 | 65.263 | 95 | 25 | 2 | 323 | 409 | 245 | 339 | 1.36e-24 | 106 |
MS.gene24034.t1 | AT2G43010 | 56.557 | 122 | 40 | 3 | 296 | 409 | 223 | 339 | 1.62e-24 | 106 |
MS.gene24034.t1 | AT2G43010 | 56.557 | 122 | 40 | 3 | 296 | 409 | 223 | 339 | 1.64e-24 | 106 |
MS.gene24034.t1 | AT2G43010 | 56.557 | 122 | 40 | 3 | 296 | 409 | 230 | 346 | 2.08e-24 | 106 |
MS.gene24034.t1 | AT2G43010 | 56.557 | 122 | 40 | 3 | 296 | 409 | 265 | 381 | 3.26e-24 | 106 |
MS.gene24034.t1 | AT4G00050 | 65.753 | 73 | 25 | 0 | 320 | 392 | 96 | 168 | 2.85e-23 | 100 |
MS.gene24034.t1 | AT4G00050 | 65.753 | 73 | 25 | 0 | 320 | 392 | 198 | 270 | 6.37e-23 | 101 |
MS.gene24034.t1 | AT4G00050 | 65.753 | 73 | 25 | 0 | 320 | 392 | 198 | 270 | 7.43e-23 | 101 |
MS.gene24034.t1 | AT5G50915 | 36.571 | 175 | 79 | 7 | 298 | 450 | 97 | 261 | 5.02e-20 | 90.5 |
MS.gene24034.t1 | AT5G50915 | 36.571 | 175 | 79 | 7 | 298 | 450 | 97 | 261 | 5.02e-20 | 90.5 |
MS.gene24034.t1 | AT2G24260 | 58.571 | 70 | 29 | 0 | 324 | 393 | 30 | 99 | 7.64e-20 | 89.7 |
MS.gene24034.t1 | AT5G50915 | 36.571 | 175 | 79 | 7 | 298 | 450 | 97 | 261 | 1.12e-19 | 90.1 |
MS.gene24034.t1 | AT5G50915 | 36.571 | 175 | 79 | 7 | 298 | 450 | 97 | 261 | 1.12e-19 | 90.1 |
MS.gene24034.t1 | AT2G24260 | 58.571 | 70 | 29 | 0 | 324 | 393 | 133 | 202 | 2.63e-19 | 90.1 |
MS.gene24034.t1 | AT3G62090 | 49.485 | 97 | 44 | 2 | 331 | 425 | 167 | 260 | 2.71e-19 | 89.7 |
MS.gene24034.t1 | AT3G62090 | 49.485 | 97 | 44 | 2 | 331 | 425 | 184 | 277 | 4.98e-19 | 89.4 |
MS.gene24034.t1 | AT4G30980 | 60.317 | 63 | 25 | 0 | 331 | 393 | 132 | 194 | 1.76e-18 | 87.0 |
MS.gene24034.t1 | AT5G58010 | 60.317 | 63 | 25 | 0 | 331 | 393 | 101 | 163 | 1.97e-18 | 86.7 |
MS.gene24034.t1 | AT4G30980 | 60.317 | 63 | 25 | 0 | 331 | 393 | 180 | 242 | 4.78e-18 | 86.3 |
MS.gene24034.t1 | AT1G02340 | 39.130 | 138 | 71 | 7 | 343 | 475 | 141 | 270 | 6.26e-17 | 82.0 |
MS.gene24034.t1 | AT1G02340 | 39.130 | 138 | 71 | 7 | 343 | 475 | 134 | 263 | 6.77e-17 | 81.6 |
MS.gene24034.t1 | AT1G59640 | 31.016 | 187 | 110 | 5 | 231 | 410 | 45 | 219 | 1.62e-16 | 80.1 |
MS.gene24034.t1 | AT5G61270 | 40.323 | 124 | 65 | 2 | 283 | 405 | 34 | 149 | 5.52e-16 | 79.0 |
MS.gene24034.t1 | AT5G61270 | 40.323 | 124 | 65 | 2 | 283 | 405 | 34 | 149 | 5.52e-16 | 79.0 |
MS.gene24034.t1 | AT5G61270 | 40.323 | 124 | 65 | 2 | 283 | 405 | 122 | 237 | 1.74e-15 | 78.6 |
MS.gene24034.t1 | AT1G59640 | 45.455 | 99 | 46 | 3 | 320 | 410 | 121 | 219 | 9.16e-15 | 76.3 |
MS.gene24034.t1 | AT4G36540 | 50.725 | 69 | 33 | 1 | 331 | 398 | 143 | 211 | 1.18e-14 | 75.5 |
MS.gene24034.t1 | AT4G36540 | 50.725 | 69 | 33 | 1 | 331 | 398 | 143 | 211 | 1.23e-14 | 75.5 |
MS.gene24034.t1 | AT1G26260 | 38.017 | 121 | 72 | 2 | 276 | 393 | 168 | 288 | 1.28e-14 | 76.3 |
MS.gene24034.t1 | AT1G26260 | 38.017 | 121 | 72 | 2 | 276 | 393 | 168 | 288 | 1.28e-14 | 76.3 |
MS.gene24034.t1 | AT1G26260 | 38.017 | 121 | 72 | 2 | 276 | 393 | 168 | 288 | 1.28e-14 | 76.3 |
MS.gene24034.t1 | AT1G26260 | 38.017 | 121 | 72 | 2 | 276 | 393 | 168 | 288 | 1.28e-14 | 76.3 |
MS.gene24034.t1 | AT1G26260 | 36.508 | 126 | 77 | 2 | 276 | 398 | 117 | 242 | 1.42e-14 | 75.5 |
MS.gene24034.t1 | AT4G34530 | 41.053 | 95 | 54 | 2 | 305 | 398 | 149 | 242 | 1.43e-14 | 75.5 |
MS.gene24034.t1 | AT1G26260 | 38.017 | 121 | 72 | 2 | 276 | 393 | 146 | 266 | 1.51e-14 | 75.9 |
MS.gene24034.t1 | AT1G10120 | 50.725 | 69 | 33 | 1 | 331 | 398 | 208 | 276 | 1.76e-14 | 75.5 |
MS.gene24034.t1 | AT1G10120 | 50.725 | 69 | 33 | 1 | 331 | 398 | 208 | 276 | 1.76e-14 | 75.5 |
MS.gene24034.t1 | AT1G68920 | 50.725 | 69 | 33 | 1 | 331 | 398 | 304 | 372 | 1.99e-14 | 76.3 |
MS.gene24034.t1 | AT1G68920 | 50.725 | 69 | 33 | 1 | 331 | 398 | 305 | 373 | 2.13e-14 | 76.3 |
MS.gene24034.t1 | AT1G68920 | 50.725 | 69 | 33 | 1 | 331 | 398 | 305 | 373 | 2.13e-14 | 76.3 |
MS.gene24034.t1 | AT1G68920 | 50.725 | 69 | 33 | 1 | 331 | 398 | 305 | 373 | 2.13e-14 | 76.3 |
MS.gene24034.t1 | AT3G07340 | 50.725 | 69 | 33 | 1 | 331 | 398 | 260 | 328 | 2.48e-14 | 75.9 |
MS.gene24034.t1 | AT5G62610 | 50.725 | 69 | 33 | 1 | 331 | 398 | 155 | 223 | 2.76e-14 | 73.9 |
MS.gene24034.t1 | AT5G62610 | 50.725 | 69 | 33 | 1 | 331 | 398 | 155 | 223 | 2.76e-14 | 73.9 |
MS.gene24034.t1 | AT3G07340 | 50.725 | 69 | 33 | 1 | 331 | 398 | 260 | 328 | 2.99e-14 | 75.5 |
MS.gene24034.t1 | AT5G48560 | 54.688 | 64 | 28 | 1 | 331 | 393 | 303 | 366 | 3.00e-14 | 75.5 |
MS.gene24034.t1 | AT5G48560 | 54.688 | 64 | 28 | 1 | 331 | 393 | 303 | 366 | 3.46e-14 | 75.5 |
MS.gene24034.t1 | AT2G18300 | 47.826 | 69 | 35 | 1 | 331 | 398 | 187 | 255 | 7.63e-14 | 73.6 |
MS.gene24034.t1 | AT2G18300 | 47.826 | 69 | 35 | 1 | 331 | 398 | 187 | 255 | 7.85e-14 | 73.2 |
MS.gene24034.t1 | AT3G23690 | 47.826 | 69 | 35 | 1 | 331 | 398 | 193 | 261 | 9.57e-14 | 73.6 |
MS.gene24034.t1 | AT2G18300 | 47.826 | 69 | 35 | 1 | 331 | 398 | 187 | 255 | 1.24e-13 | 73.2 |
MS.gene24034.t1 | AT2G14760 | 36.735 | 98 | 53 | 1 | 327 | 424 | 235 | 323 | 1.46e-13 | 72.4 |
MS.gene24034.t1 | AT1G25330 | 50.000 | 64 | 31 | 1 | 331 | 393 | 106 | 169 | 2.24e-13 | 70.1 |
MS.gene24034.t1 | AT1G73830 | 48.438 | 64 | 32 | 1 | 331 | 393 | 149 | 212 | 4.05e-13 | 70.1 |
MS.gene24034.t1 | AT1G73830 | 48.438 | 64 | 32 | 1 | 331 | 393 | 149 | 212 | 4.46e-13 | 70.1 |
MS.gene24034.t1 | AT1G18400 | 48.438 | 64 | 32 | 1 | 331 | 393 | 147 | 210 | 6.24e-13 | 69.3 |
MS.gene24034.t1 | AT4G33880 | 38.298 | 94 | 49 | 1 | 327 | 420 | 264 | 348 | 6.77e-13 | 70.5 |
MS.gene24034.t1 | AT1G18400 | 48.438 | 64 | 32 | 1 | 331 | 393 | 147 | 210 | 8.30e-13 | 69.3 |
MS.gene24034.t1 | AT3G57800 | 51.562 | 64 | 30 | 1 | 331 | 393 | 206 | 269 | 9.39e-13 | 70.5 |
MS.gene24034.t1 | AT2G42300 | 46.377 | 69 | 36 | 1 | 331 | 398 | 187 | 255 | 1.02e-12 | 68.9 |
MS.gene24034.t1 | AT2G42300 | 46.377 | 69 | 36 | 1 | 331 | 398 | 187 | 255 | 1.36e-12 | 69.3 |
MS.gene24034.t1 | AT1G27740 | 44.776 | 67 | 37 | 0 | 326 | 392 | 164 | 230 | 1.39e-12 | 68.6 |
MS.gene24034.t1 | AT4G28790 | 27.108 | 332 | 173 | 10 | 23 | 345 | 16 | 287 | 2.39e-12 | 68.6 |
MS.gene24034.t1 | AT4G28790 | 27.108 | 332 | 173 | 10 | 23 | 345 | 16 | 287 | 2.39e-12 | 68.6 |
MS.gene24034.t1 | AT4G28790 | 27.108 | 332 | 173 | 10 | 23 | 345 | 16 | 287 | 2.39e-12 | 68.6 |
MS.gene24034.t1 | AT1G68240 | 41.111 | 90 | 52 | 1 | 315 | 403 | 47 | 136 | 4.36e-12 | 65.5 |
MS.gene24034.t1 | AT5G43175 | 34.694 | 98 | 55 | 1 | 323 | 420 | 126 | 214 | 4.50e-12 | 66.2 |
MS.gene24034.t1 | AT1G68240 | 41.111 | 90 | 52 | 1 | 315 | 403 | 47 | 136 | 7.05e-12 | 64.7 |
MS.gene24034.t1 | AT2G14760 | 34.021 | 97 | 55 | 1 | 328 | 424 | 249 | 336 | 1.14e-11 | 66.6 |
Find 165 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCTAAATTGGCGGTGGTTT+TGG | 0.202001 | 1.3:+48406303 | None:intergenic |
ATGGGGATGGGAATGGGTTT+AGG | 0.204090 | 1.3:-48400493 | MS.gene24034:CDS |
GCAACTGTAGCTGGTCCTTT+TGG | 0.266955 | 1.3:-48400391 | MS.gene24034:CDS |
CGGCAGGGGTGGCGGCTTCT+CGG | 0.320550 | 1.3:-48405971 | MS.gene24034:CDS |
GGAGAATTAGGCAACATATT+AGG | 0.325301 | 1.3:+48400427 | None:intergenic |
GCAGAGAACCAAGGGAGTTA+AGG | 0.325749 | 1.3:+48400272 | None:intergenic |
GGTTTCTTTGAATGATGTAT+AGG | 0.327763 | 1.3:+48406486 | None:intergenic |
GCTGCTGGCAAAGGAGAATT+AGG | 0.328372 | 1.3:+48400415 | None:intergenic |
TGGGGATGGGAATGGGTTTA+GGG | 0.339637 | 1.3:-48400492 | MS.gene24034:CDS |
CTCTGAAACTCAGATTCTTC+CGG | 0.349431 | 1.3:+48405537 | None:intergenic |
GTTTCTTTGAATGATGTATA+GGG | 0.365818 | 1.3:+48406487 | None:intergenic |
ATCCAACATTGAAGCTTTGT+CGG | 0.371400 | 1.3:+48402371 | None:intergenic |
GTACGCTGCTTCGAGATTAT+CGG | 0.371790 | 1.3:-48405730 | MS.gene24034:CDS |
CTGCAGGAACATGGGGCATA+TGG | 0.374715 | 1.3:+48400344 | None:intergenic |
GCTTGCATTCTGGATGAATC+AGG | 0.377153 | 1.3:+48400316 | None:intergenic |
TGGTAAGGATCTGTGAAGTT+TGG | 0.382377 | 1.3:+48400223 | None:intergenic |
GGTAAGGATCTGTGAAGTTT+GGG | 0.385109 | 1.3:+48400224 | None:intergenic |
TCCATTTGAATATCGAAATC+TGG | 0.386523 | 1.3:+48406525 | None:intergenic |
CAGAGAACCAAGGGAGTTAA+GGG | 0.393263 | 1.3:+48400273 | None:intergenic |
TTTATGCCGGCGATGGGAAT+GGG | 0.402200 | 1.3:-48400511 | MS.gene24034:CDS |
GGATCTGTGAAGTTTGGGTT+TGG | 0.408214 | 1.3:+48400229 | None:intergenic |
ATGGGAATGGGGATGGGAAT+GGG | 0.415003 | 1.3:-48400499 | MS.gene24034:CDS |
GGCATAAATTGCTGAATTCC+AGG | 0.416047 | 1.3:+48400526 | None:intergenic |
TTCTAGCGGGAGTGCTGAAC+CGG | 0.418643 | 1.3:-48405604 | MS.gene24034:CDS |
CTGGCGGTGGTTGTAGTTGC+CGG | 0.419365 | 1.3:+48406269 | None:intergenic |
AGGAGCGCGACGGCGGAGAC+TGG | 0.419387 | 1.3:-48405699 | MS.gene24034:CDS |
CGAGATTATCGGAAACGATC+AGG | 0.421871 | 1.3:-48405719 | MS.gene24034:CDS |
GAAAAGGAAGGGACGTGAAC+CGG | 0.422354 | 1.3:-48405556 | MS.gene24034:CDS |
GTTCATGCAAGAAGATGAAA+TGG | 0.432145 | 1.3:-48406180 | MS.gene24034:CDS |
GATTCATCCGGCGAGGAAAC+CGG | 0.433202 | 1.3:-48405943 | MS.gene24034:CDS |
CATTCATCAGTCGGAAGCGC+CGG | 0.433679 | 1.3:-48406077 | MS.gene24034:CDS |
TGGATTATCTTGGCTCCCAC+TGG | 0.435044 | 1.3:+48399152 | None:intergenic |
AACGAGACCGGCAGGGGTGG+CGG | 0.437941 | 1.3:-48405979 | MS.gene24034:CDS |
TTTGGAATGCGTGATTGATC+TGG | 0.440584 | 1.3:+48400247 | None:intergenic |
TTAGGCAACATATTAGGAAA+TGG | 0.443474 | 1.3:+48400433 | None:intergenic |
GGTGGGGACCGAGGTATTGC+TGG | 0.446521 | 1.3:+48400203 | None:intergenic |
GGTTTCCTCGCCGGATGAAT+CGG | 0.451246 | 1.3:+48405945 | None:intergenic |
GATGGGAATGGGGATGGGAA+TGG | 0.451351 | 1.3:-48400500 | MS.gene24034:CDS |
TCTTGGCTCCCACTGGTACC+TGG | 0.452130 | 1.3:+48399159 | None:intergenic |
TCCAGATTTCGATATTCAAA+TGG | 0.453129 | 1.3:-48406526 | MS.gene24034:CDS |
TAGAACACAGAAACCGGATA+TGG | 0.455584 | 1.3:-48405907 | MS.gene24034:CDS |
ATGGGTTTAGGGATGGAAAT+GGG | 0.456164 | 1.3:-48400481 | MS.gene24034:CDS |
CGAGAAGCCGCCACCCCTGC+CGG | 0.456524 | 1.3:+48405972 | None:intergenic |
CAGAATGATAATTACGTGAA+AGG | 0.456561 | 1.3:+48406465 | None:intergenic |
GTCATTGCAGTTACAAGTGC+AGG | 0.457289 | 1.3:-48402328 | MS.gene24034:intron |
CAGGTGCAGCTGCAGGAACA+TGG | 0.457934 | 1.3:+48400335 | None:intergenic |
CAGAAACACGGCGGAGGTAG+TGG | 0.461846 | 1.3:-48406053 | MS.gene24034:CDS |
CGTCGCCTGGTTGTTCTAGC+GGG | 0.462418 | 1.3:-48405617 | MS.gene24034:CDS |
ATTTATGCCGGCGATGGGAA+TGG | 0.464029 | 1.3:-48400512 | MS.gene24034:CDS |
GGTGAATAGAACACAGAAAC+CGG | 0.465326 | 1.3:-48405913 | MS.gene24034:CDS |
ATGATACCTATGATGTTTCC+TGG | 0.467201 | 1.3:-48400544 | MS.gene24034:CDS |
GTTCTATTCACCACCATATC+CGG | 0.470011 | 1.3:+48405894 | None:intergenic |
CCAGCAGCAGCAACTGTAGC+TGG | 0.470668 | 1.3:-48400400 | MS.gene24034:CDS |
CCAGCTACAGTTGCTGCTGC+TGG | 0.475321 | 1.3:+48400400 | None:intergenic |
GTTCACTTCTCGCATTACTT+TGG | 0.477874 | 1.3:+48405841 | None:intergenic |
CTTTATGCAGATGATGTCCA+TGG | 0.478571 | 1.3:-48400575 | MS.gene24034:intron |
GATCGAATCTCTCTATGATC+AGG | 0.479842 | 1.3:+48406236 | None:intergenic |
TTAGGGATGGAAATGGGAAT+GGG | 0.480235 | 1.3:-48400475 | MS.gene24034:CDS |
CATTAATTGCTGCACCTGGT+GGG | 0.482274 | 1.3:+48400186 | None:intergenic |
TCAGCAATTTATGCCGGCGA+TGG | 0.482673 | 1.3:-48400518 | MS.gene24034:CDS |
GTTCAGCAAACGAGACCGGC+AGG | 0.485745 | 1.3:-48405987 | MS.gene24034:CDS |
CCTGCATTAATTGCTGCACC+TGG | 0.485944 | 1.3:+48400182 | None:intergenic |
AATGGGTTTAGGGATGGAAA+TGG | 0.486555 | 1.3:-48400482 | MS.gene24034:CDS |
AACCGGAGTTGGACCGGAAA+AGG | 0.489470 | 1.3:-48405572 | MS.gene24034:CDS |
ATATTAGGAAATGGCATCAC+TGG | 0.491333 | 1.3:+48400442 | None:intergenic |
TGAATTCCAGGAAACATCAT+AGG | 0.491738 | 1.3:+48400538 | None:intergenic |
GCCGGCGATGGGAATGGGGA+TGG | 0.493972 | 1.3:-48400506 | MS.gene24034:CDS |
CCCATCCCCATTCCCATCGC+CGG | 0.494774 | 1.3:+48400505 | None:intergenic |
GTTTGTTCAGCAAACGAGAC+CGG | 0.495146 | 1.3:-48405991 | MS.gene24034:CDS |
ATGACAGTTACGTCGTCGCC+TGG | 0.498022 | 1.3:-48405630 | MS.gene24034:CDS |
CCGGCGATGGGAATGGGGAT+GGG | 0.499606 | 1.3:-48400505 | MS.gene24034:CDS |
AACTCCGGTTCTCTATGAAC+CGG | 0.499849 | 1.3:+48405585 | None:intergenic |
ACAGTTGCTGCTGCTGGCAA+AGG | 0.505523 | 1.3:+48400406 | None:intergenic |
GATGAATCAGGTGCAGCTGC+AGG | 0.505773 | 1.3:+48400328 | None:intergenic |
GTTGTAGTTGCCGGTGCCGA+CGG | 0.507949 | 1.3:+48406278 | None:intergenic |
ACCATCTCCGGTTTCCTCGC+CGG | 0.508019 | 1.3:+48405936 | None:intergenic |
GTTCTATTCACCACCATCTC+CGG | 0.514131 | 1.3:+48405924 | None:intergenic |
GGACCGAGGTATTGCTGGTA+AGG | 0.515019 | 1.3:+48400208 | None:intergenic |
AGGAATCACGCGACTGGCGG+TGG | 0.519980 | 1.3:+48406256 | None:intergenic |
TGGAATTCAGCAATTTATGC+CGG | 0.522421 | 1.3:-48400524 | MS.gene24034:CDS |
CTGAAATCGTGACGGTTGAA+AGG | 0.522705 | 1.3:+48406116 | None:intergenic |
ATTTAGAAAACCGTCGGCAC+CGG | 0.522972 | 1.3:-48406288 | MS.gene24034:CDS |
GCAACAAGACGATGAGATCA+TGG | 0.527589 | 1.3:-48406363 | MS.gene24034:CDS |
TTCTCGGCCTCCGATTCATC+CGG | 0.528261 | 1.3:-48405955 | MS.gene24034:CDS |
AGGTGCAGCTGCAGGAACAT+GGG | 0.528619 | 1.3:+48400336 | None:intergenic |
ATAGCGAGCCTTGGTCCAAA+AGG | 0.532882 | 1.3:+48400376 | None:intergenic |
TTTAGGGATGGAAATGGGAA+TGG | 0.534529 | 1.3:-48400476 | MS.gene24034:CDS |
ATGGAACTATTGTGGCAAAA+CGG | 0.535259 | 1.3:-48406344 | MS.gene24034:CDS |
ATAGAGAACCGGAGTTGGAC+CGG | 0.535858 | 1.3:-48405578 | MS.gene24034:CDS |
GTCAACAGACCAGGTACCAG+TGG | 0.537139 | 1.3:-48399168 | MS.gene24034:CDS |
CAGCAATTTATGCCGGCGAT+GGG | 0.537150 | 1.3:-48400517 | MS.gene24034:CDS |
TGCGTGAGTGTGAGCACCAC+CGG | 0.539985 | 1.3:-48405675 | MS.gene24034:CDS |
TCAGCAAACGAGACCGGCAG+GGG | 0.544570 | 1.3:-48405985 | MS.gene24034:CDS |
GCAATACCTCGGTCCCCACC+AGG | 0.546189 | 1.3:-48400200 | MS.gene24034:CDS |
AACGATCAGGAGCGCGACGG+CGG | 0.546234 | 1.3:-48405706 | MS.gene24034:CDS |
ATTCATGTAGTTATCTGCAT+CGG | 0.548506 | 1.3:+48406211 | None:intergenic |
ACCTCCGCCGTGTTTCTGAC+CGG | 0.553023 | 1.3:+48406058 | None:intergenic |
GTCCGACAAAGCTTCAATGT+TGG | 0.553364 | 1.3:-48402373 | MS.gene24034:CDS |
ATTAATTGCTGCACCTGGTG+GGG | 0.553799 | 1.3:+48400187 | None:intergenic |
ATCTGGAGGCAGAGAACCAA+GGG | 0.555021 | 1.3:+48400264 | None:intergenic |
GCATTAATTGCTGCACCTGG+TGG | 0.556345 | 1.3:+48400185 | None:intergenic |
ATTATGAACCTCTGCAGCAC+GGG | 0.558566 | 1.3:+48402638 | None:intergenic |
GCAAACGAGACCGGCAGGGG+TGG | 0.560535 | 1.3:-48405982 | MS.gene24034:CDS |
GATGGGAATGGGTTTAGGGA+TGG | 0.562444 | 1.3:-48400488 | MS.gene24034:CDS |
ATGATCAGGAATCACGCGAC+TGG | 0.564484 | 1.3:+48406250 | None:intergenic |
GCCGGTCAGAAACACGGCGG+AGG | 0.564625 | 1.3:-48406059 | MS.gene24034:CDS |
TGAACCGGTTCATAGAGAAC+CGG | 0.564686 | 1.3:-48405589 | MS.gene24034:CDS |
AAAGGAGGCATAGCGAGCCT+TGG | 0.567635 | 1.3:+48400367 | None:intergenic |
AGGTATCATGCCACATCCCA+TGG | 0.569792 | 1.3:+48400558 | None:intergenic |
GGAACATGGGGCATATGGAA+AGG | 0.576243 | 1.3:+48400349 | None:intergenic |
AAAGAGATCCCGTGCTGCAG+AGG | 0.580112 | 1.3:-48402646 | MS.gene24034:CDS |
AAACTCCGACTCACGTTCCG+TGG | 0.580438 | 1.3:+48406010 | None:intergenic |
TTATGCCGGCGATGGGAATG+GGG | 0.582904 | 1.3:-48400510 | MS.gene24034:CDS |
CCAGGTGCAGCAATTAATGC+AGG | 0.585533 | 1.3:-48400182 | MS.gene24034:intron |
GGTTCATAGAGAACCGGAGT+TGG | 0.586478 | 1.3:-48405583 | MS.gene24034:CDS |
GGTGCAGCTGCAGGAACATG+GGG | 0.593185 | 1.3:+48400337 | None:intergenic |
ATGAGATCATGGAACTATTG+TGG | 0.596163 | 1.3:-48406352 | MS.gene24034:CDS |
ACAAGCCACGGAACGTGAGT+CGG | 0.600009 | 1.3:-48406015 | MS.gene24034:CDS |
CAGATGATGTCCATGGGATG+TGG | 0.601497 | 1.3:-48400568 | MS.gene24034:CDS |
ATCGAACTCGAAGATGCACC+TGG | 0.602615 | 1.3:+48405819 | None:intergenic |
TTCAGCAAACGAGACCGGCA+GGG | 0.603612 | 1.3:-48405986 | MS.gene24034:CDS |
GGCGAGGAAACCGGAGATGG+TGG | 0.604411 | 1.3:-48405934 | MS.gene24034:CDS |
TGCAGCGGCAAGAGAATCGA+CGG | 0.605167 | 1.3:-48405793 | MS.gene24034:CDS |
AGAGAACCAAGGGAGTTAAG+GGG | 0.605857 | 1.3:+48400274 | None:intergenic |
GCTGCACCTGGTGGGGACCG+AGG | 0.609026 | 1.3:+48400194 | None:intergenic |
TCCGGCGAGGAAACCGGAGA+TGG | 0.609760 | 1.3:-48405937 | MS.gene24034:CDS |
TTTATGCAGATGATGTCCAT+GGG | 0.610157 | 1.3:-48400574 | MS.gene24034:intron |
GATTATGAACCTCTGCAGCA+CGG | 0.610880 | 1.3:+48402637 | None:intergenic |
CGGAAAAGCTGCGACGACGT+TGG | 0.612425 | 1.3:-48405655 | MS.gene24034:CDS |
GAATATCGAAATCTGGAACA+TGG | 0.612681 | 1.3:+48406532 | None:intergenic |
TTCCTCGCCGGATGAATCGG+AGG | 0.613809 | 1.3:+48405948 | None:intergenic |
AGTAATGCGAGAAGTGAACC+AGG | 0.615012 | 1.3:-48405837 | MS.gene24034:CDS |
GGAGTTGGACCGGAAAAGGA+AGG | 0.615583 | 1.3:-48405568 | MS.gene24034:CDS |
AACACAGAAACCGGATATGG+TGG | 0.616872 | 1.3:-48405904 | MS.gene24034:CDS |
TGTTATACAAGCACAAGCCA+CGG | 0.625309 | 1.3:-48406027 | MS.gene24034:CDS |
GGTTCATAATCTCTCAGAGA+GGG | 0.625587 | 1.3:-48402625 | MS.gene24034:intron |
CAGCAAAATGTCAACAGACC+AGG | 0.626812 | 1.3:-48399177 | MS.gene24034:CDS |
ACTTATACCGCGGTGCAACA+AGG | 0.628814 | 1.3:-48402481 | MS.gene24034:intron |
GAGAACCAAGGGAGTTAAGG+GGG | 0.629551 | 1.3:+48400275 | None:intergenic |
TCGTCGCCTGGTTGTTCTAG+CGG | 0.629552 | 1.3:-48405618 | MS.gene24034:CDS |
GAGTTGGACCGGAAAAGGAA+GGG | 0.631011 | 1.3:-48405567 | MS.gene24034:CDS |
AAACACGGCGGAGGTAGTGG+CGG | 0.631102 | 1.3:-48406050 | MS.gene24034:CDS |
AGAATCTGAGTTTCAGAGCG+AGG | 0.634691 | 1.3:-48405532 | MS.gene24034:intron |
GGAAGCGCCGGTCAGAAACA+CGG | 0.635704 | 1.3:-48406065 | MS.gene24034:CDS |
GGAATGCGTGATTGATCTGG+AGG | 0.645810 | 1.3:+48400250 | None:intergenic |
ATCAGGAATCACGCGACTGG+CGG | 0.647878 | 1.3:+48406253 | None:intergenic |
AAATCGTGACGGTTGAAAGG+AGG | 0.650313 | 1.3:+48406119 | None:intergenic |
CTTTGCAAGAACTTATACCG+CGG | 0.653949 | 1.3:-48402491 | MS.gene24034:CDS |
GGCCTCCGATTCATCCGGCG+AGG | 0.655663 | 1.3:-48405950 | MS.gene24034:CDS |
ACATGGGGCATATGGAAAGG+AGG | 0.660166 | 1.3:+48400352 | None:intergenic |
GGAAACGATCAGGAGCGCGA+CGG | 0.663906 | 1.3:-48405709 | MS.gene24034:CDS |
TTCGAGTTCGATGATTGCAG+CGG | 0.665279 | 1.3:-48405808 | MS.gene24034:CDS |
GATCCTTACCAGCAATACCT+CGG | 0.665739 | 1.3:-48400211 | MS.gene24034:CDS |
GATCTGGAGGCAGAGAACCA+AGG | 0.671898 | 1.3:+48400263 | None:intergenic |
GCACTCCCGCTAGAACAACC+AGG | 0.673024 | 1.3:+48405612 | None:intergenic |
CCGCCAATTTAGAAAACCGT+CGG | 0.675021 | 1.3:-48406294 | MS.gene24034:CDS |
TCTTTGCAGATGTAGATCCA+CGG | 0.678173 | 1.3:+48402664 | None:intergenic |
GGTAGATTCATGTGATACGC+CGG | 0.678374 | 1.3:-48405769 | MS.gene24034:CDS |
TCAACAGACCAGGTACCAGT+GGG | 0.681572 | 1.3:-48399167 | MS.gene24034:CDS |
TGTTTCACCTTGTTGCACCG+CGG | 0.687099 | 1.3:+48402474 | None:intergenic |
AAGAAGATGAAATGGCATCG+TGG | 0.726842 | 1.3:-48406172 | MS.gene24034:CDS |
TTTCTGAACTGAAATCGTGA+CGG | 0.732941 | 1.3:+48406108 | None:intergenic |
AGGTTCATAATCTCTCAGAG+AGG | 0.750433 | 1.3:-48402626 | MS.gene24034:CDS |
AGCGCCGGTCAGAAACACGG+CGG | 0.772257 | 1.3:-48406062 | MS.gene24034:CDS |
AGCGGCAAGAGAATCGACGG+TGG | 0.788837 | 1.3:-48405790 | MS.gene24034:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.3 | gene | 48399140 | 48406562 | 48399140 | ID=MS.gene24034 |
chr1.3 | mRNA | 48399140 | 48406562 | 48399140 | ID=MS.gene24034.t1;Parent=MS.gene24034 |
chr1.3 | exon | 48406480 | 48406562 | 48406480 | ID=MS.gene24034.t1.exon1;Parent=MS.gene24034.t1 |
chr1.3 | CDS | 48406480 | 48406562 | 48406480 | ID=cds.MS.gene24034.t1;Parent=MS.gene24034.t1 |
chr1.3 | exon | 48405533 | 48406385 | 48405533 | ID=MS.gene24034.t1.exon2;Parent=MS.gene24034.t1 |
chr1.3 | CDS | 48405533 | 48406385 | 48405533 | ID=cds.MS.gene24034.t1;Parent=MS.gene24034.t1 |
chr1.3 | exon | 48402626 | 48402724 | 48402626 | ID=MS.gene24034.t1.exon3;Parent=MS.gene24034.t1 |
chr1.3 | CDS | 48402626 | 48402724 | 48402626 | ID=cds.MS.gene24034.t1;Parent=MS.gene24034.t1 |
chr1.3 | exon | 48402482 | 48402547 | 48402482 | ID=MS.gene24034.t1.exon4;Parent=MS.gene24034.t1 |
chr1.3 | CDS | 48402482 | 48402547 | 48402482 | ID=cds.MS.gene24034.t1;Parent=MS.gene24034.t1 |
chr1.3 | exon | 48402329 | 48402394 | 48402329 | ID=MS.gene24034.t1.exon5;Parent=MS.gene24034.t1 |
chr1.3 | CDS | 48402329 | 48402394 | 48402329 | ID=cds.MS.gene24034.t1;Parent=MS.gene24034.t1 |
chr1.3 | exon | 48400183 | 48400587 | 48400183 | ID=MS.gene24034.t1.exon6;Parent=MS.gene24034.t1 |
chr1.3 | CDS | 48400183 | 48400587 | 48400183 | ID=cds.MS.gene24034.t1;Parent=MS.gene24034.t1 |
chr1.3 | exon | 48399140 | 48399208 | 48399140 | ID=MS.gene24034.t1.exon7;Parent=MS.gene24034.t1 |
chr1.3 | CDS | 48399140 | 48399208 | 48399140 | ID=cds.MS.gene24034.t1;Parent=MS.gene24034.t1 |
Gene Sequence |
Protein sequence |