AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene057124


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene057124.t1 MTR_3g491830 98.742 318 4 0 1 318 73 390 0.0 644
MS.gene057124.t1 MTR_4g123080 32.394 284 147 9 16 290 94 341 2.40e-34 129
MS.gene057124.t1 MTR_4g123080 32.394 284 147 9 16 290 112 359 2.86e-34 129
MS.gene057124.t1 MTR_2g033000 34.211 266 132 8 16 274 99 328 6.45e-34 127
MS.gene057124.t1 MTR_4g116420 29.545 264 148 7 13 274 120 347 8.65e-31 119
MS.gene057124.t1 MTR_4g007440 29.781 319 150 10 1 274 36 325 1.28e-29 116
MS.gene057124.t1 MTR_1g014190 29.231 325 157 8 16 295 51 347 4.13e-29 114
MS.gene057124.t1 MTR_1g014190 29.231 325 157 8 16 295 89 385 7.07e-29 114
MS.gene057124.t1 MTR_1g086350 30.333 300 164 9 3 290 84 350 8.17e-29 114
MS.gene057124.t1 MTR_1g086350 30.333 300 164 9 3 290 100 366 9.00e-29 114
MS.gene057124.t1 MTR_1g086350 29.412 289 163 8 10 290 9 264 1.20e-28 112
MS.gene057124.t1 MTR_3g105880 28.485 330 161 10 16 299 51 351 1.43e-27 110
MS.gene057124.t1 MTR_5g024340 29.167 264 148 5 16 279 123 347 4.85e-27 109
MS.gene057124.t1 MTR_5g071550 29.520 271 139 9 13 277 150 374 1.90e-26 107
MS.gene057124.t1 MTR_3g107880 26.667 285 161 7 1 274 37 284 3.81e-26 105
MS.gene057124.t1 MTR_3g105730 27.240 279 150 7 1 274 25 255 6.44e-26 104
MS.gene057124.t1 MTR_3g105730 27.240 279 150 7 1 274 47 277 7.28e-26 104
MS.gene057124.t1 MTR_1g014640 27.240 279 150 7 1 274 90 320 1.01e-25 105
MS.gene057124.t1 MTR_1g013400 27.240 279 150 7 1 274 90 320 1.01e-25 105
MS.gene057124.t1 MTR_3g107880 26.667 285 161 7 1 274 94 341 1.33e-25 105
MS.gene057124.t1 MTR_3g107880 26.667 285 161 7 1 274 95 342 1.35e-25 105
MS.gene057124.t1 MTR_1g115570 29.699 266 130 8 13 274 122 334 2.36e-25 104
MS.gene057124.t1 MTR_6g081850 29.682 283 143 8 9 274 72 315 8.12e-25 102
MS.gene057124.t1 MTR_3g091060 27.599 279 149 7 1 274 107 337 4.26e-24 101
MS.gene057124.t1 MTR_3g068200 26.537 309 157 9 1 277 105 375 1.81e-23 99.8
MS.gene057124.t1 MTR_2g078760 27.972 286 145 10 1 277 20 253 5.15e-23 96.3
MS.gene057124.t1 MTR_3g105880 29.537 281 136 8 1 244 36 291 6.90e-23 97.1
MS.gene057124.t1 MTR_8g463130 29.278 263 127 9 19 274 40 250 1.25e-22 95.1
MS.gene057124.t1 MTR_3g464700 30.088 226 108 6 16 237 117 296 1.57e-22 96.3
MS.gene057124.t1 MTR_8g463130 29.278 263 127 9 19 274 68 278 1.59e-22 95.5
MS.gene057124.t1 MTR_2g078760 27.972 286 145 10 1 277 99 332 1.81e-22 96.3
MS.gene057124.t1 MTR_3g104710 25.743 303 166 9 1 277 270 539 1.95e-22 97.8
MS.gene057124.t1 MTR_3g464650 27.881 269 140 9 16 277 93 314 5.24e-22 94.7
MS.gene057124.t1 MTR_4g094208 28.517 263 129 8 19 274 63 273 1.45e-21 92.8
MS.gene057124.t1 MTR_5g071550 29.864 221 105 8 13 229 150 324 1.69e-19 88.2
MS.gene057124.t1 MTR_5g009370 29.457 258 134 8 1 247 65 285 1.71e-19 87.8
MS.gene057124.t1 MTR_1g015110 26.159 302 151 11 7 277 283 543 3.67e-19 88.2
MS.gene057124.t1 MTR_1g050520 27.797 295 145 12 1 277 400 644 3.96e-19 88.2
MS.gene057124.t1 MTR_2g008850 28.137 263 130 9 19 274 21 231 4.14e-19 85.1
MS.gene057124.t1 MTR_1g028300 30.000 280 138 11 17 280 145 382 4.15e-19 87.4
MS.gene057124.t1 MTR_4g125810 24.383 324 159 9 1 277 219 503 6.31e-19 87.4
MS.gene057124.t1 MTR_4g094542 25.623 281 140 10 1 262 132 362 1.24e-18 85.9
MS.gene057124.t1 MTR_4g123080 33.974 156 79 3 137 290 113 246 2.08e-18 83.6
MS.gene057124.t1 MTR_2g008850 28.137 263 130 9 19 274 67 277 3.81e-18 83.2
MS.gene057124.t1 MTR_7g090530 25.246 305 182 9 17 289 69 359 7.77e-18 84.0
MS.gene057124.t1 MTR_2g040500 25.298 336 159 12 1 277 233 535 1.37e-17 83.6
MS.gene057124.t1 MTR_3g032700 24.675 308 176 9 17 287 68 356 6.87e-16 78.2
MS.gene057124.t1 MTR_8g102550 25.087 287 149 9 12 277 147 388 7.09e-16 78.2
MS.gene057124.t1 MTR_5g080680 24.609 256 138 7 1 241 114 329 1.77e-15 76.6
MS.gene057124.t1 MTR_3g032660 24.351 308 177 9 17 287 68 356 3.31e-15 76.3
MS.gene057124.t1 MTR_1g110210 26.712 292 153 9 10 286 61 306 1.05e-14 73.9
MS.gene057124.t1 MTR_7g090550 24.735 283 176 9 17 281 70 333 9.26e-14 72.0
MS.gene057124.t1 MTR_7g100240 26.378 254 139 10 16 246 70 298 5.66e-13 69.3
MS.gene057124.t1 MTR_7g060770 24.919 309 183 11 13 285 259 554 7.30e-13 69.3
MS.gene057124.t1 MTR_1g067210 26.829 246 142 9 16 243 75 300 1.51e-12 68.2
MS.gene057124.t1 MTR_1g106855 26.531 245 140 7 16 240 60 284 1.75e-12 67.4
MS.gene057124.t1 MTR_1g112840 25.101 247 149 6 16 245 80 307 2.08e-12 67.8
MS.gene057124.t1 MTR_1g106855 26.531 245 140 7 16 240 60 284 2.72e-12 67.4
MS.gene057124.t1 MTR_7g081020 25.514 243 153 8 16 245 75 302 5.56e-12 65.9
MS.gene057124.t1 MTR_3g105730 26.316 152 94 4 1 150 47 182 6.11e-12 64.7
MS.gene057124.t1 MTR_7g081020 25.514 243 153 8 16 245 75 302 8.22e-12 65.9
MS.gene057124.t1 MTR_5g071550 33.333 117 65 4 13 129 150 253 1.39e-11 64.3
MS.gene057124.t1 MTR_8g074930 24.291 247 147 10 16 243 78 303 3.33e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene057124.t1 AT4G27800 67.192 317 104 0 1 317 72 388 2.68e-162 457
MS.gene057124.t1 AT4G27800 67.939 262 84 0 1 262 72 333 2.13e-132 380
MS.gene057124.t1 AT4G27800 66.535 254 85 0 1 254 72 325 2.15e-126 364
MS.gene057124.t1 AT3G62260 29.537 281 161 7 16 290 26 275 8.65e-32 120
MS.gene057124.t1 AT3G62260 29.537 281 161 7 16 290 116 365 4.76e-31 120
MS.gene057124.t1 AT3G62260 29.537 281 161 7 16 290 115 364 4.94e-31 120
MS.gene057124.t1 AT1G43900 31.786 280 135 10 1 274 136 365 1.17e-28 114
MS.gene057124.t1 AT3G17250 29.588 267 149 8 15 274 156 390 3.72e-27 110
MS.gene057124.t1 AT3G51470 27.308 260 148 5 16 274 61 280 4.84e-27 108
MS.gene057124.t1 AT3G51470 27.308 260 148 5 16 274 105 324 1.15e-26 108
MS.gene057124.t1 AT5G53140 28.000 300 162 9 1 295 114 364 1.19e-26 108
MS.gene057124.t1 AT5G53140 28.000 300 162 9 1 295 114 364 1.19e-26 108
MS.gene057124.t1 AT2G33700 27.174 276 162 4 16 291 122 358 2.70e-26 107
MS.gene057124.t1 AT2G25620 27.778 270 160 7 10 277 120 356 2.86e-26 107
MS.gene057124.t1 AT2G25620 27.778 270 160 7 10 277 120 356 2.86e-26 107
MS.gene057124.t1 AT2G40180 31.343 268 136 9 16 277 160 385 4.56e-26 107
MS.gene057124.t1 AT1G48040 29.537 281 157 9 16 290 115 360 9.05e-26 106
MS.gene057124.t1 AT2G25070 27.103 321 141 9 16 281 51 333 1.11e-25 105
MS.gene057124.t1 AT2G25070 27.103 321 141 9 16 281 51 333 1.11e-25 105
MS.gene057124.t1 AT4G31860 29.352 293 141 9 16 271 51 314 4.04e-25 103
MS.gene057124.t1 AT1G67820 32.751 229 105 6 16 240 114 297 4.09e-25 104
MS.gene057124.t1 AT4G31750 29.675 246 124 6 1 241 46 247 4.11e-25 102
MS.gene057124.t1 AT1G67820 32.751 229 105 6 16 240 150 333 6.21e-25 104
MS.gene057124.t1 AT4G31750 29.675 246 124 6 1 241 46 247 7.93e-25 102
MS.gene057124.t1 AT4G31750 29.675 246 124 6 1 241 46 247 7.93e-25 102
MS.gene057124.t1 AT1G07160 28.625 269 135 8 19 277 155 376 8.58e-25 103
MS.gene057124.t1 AT5G24940 27.957 279 148 8 1 274 46 276 1.26e-24 103
MS.gene057124.t1 AT1G18030 30.466 279 146 9 9 274 102 345 1.60e-24 102
MS.gene057124.t1 AT5G59220 27.899 276 132 7 1 253 124 355 2.69e-24 102
MS.gene057124.t1 AT5G10740 27.599 279 149 8 1 274 46 276 1.83e-23 99.4
MS.gene057124.t1 AT5G10740 27.599 279 149 8 1 274 46 276 1.83e-23 99.4
MS.gene057124.t1 AT2G29380 26.688 311 158 9 1 279 90 362 2.86e-23 99.0
MS.gene057124.t1 AT4G28400 26.855 283 146 9 1 274 27 257 5.13e-23 96.3
MS.gene057124.t1 AT2G30020 28.409 264 139 8 20 277 173 392 9.43e-23 97.8
MS.gene057124.t1 AT4G28400 26.855 283 146 9 1 274 49 279 1.11e-22 95.9
MS.gene057124.t1 AT4G31860 29.213 267 127 8 16 245 51 292 5.42e-22 94.4
MS.gene057124.t1 AT2G40860 27.178 287 150 10 1 274 307 547 1.59e-21 95.5
MS.gene057124.t1 AT3G15260 28.517 263 129 11 19 274 75 285 1.72e-21 92.8
MS.gene057124.t1 AT3G15260 28.517 263 129 11 19 274 75 285 1.72e-21 92.8
MS.gene057124.t1 AT2G40860 27.178 287 150 10 1 274 405 645 1.93e-21 95.1
MS.gene057124.t1 AT2G20630 27.208 283 145 10 1 274 45 275 2.72e-21 92.0
MS.gene057124.t1 AT2G20630 27.208 283 145 10 1 274 45 275 7.23e-21 90.9
MS.gene057124.t1 AT2G40860 28.102 274 139 10 1 259 405 635 2.52e-20 92.0
MS.gene057124.t1 AT2G34740 27.113 284 144 12 1 274 101 331 2.81e-20 90.1
MS.gene057124.t1 AT1G07430 25.573 262 135 7 1 241 133 355 9.48e-20 89.7
MS.gene057124.t1 AT1G18030 31.760 233 112 9 9 229 102 299 1.14e-19 87.8
MS.gene057124.t1 AT1G78200 25.267 281 156 8 1 274 1 234 2.32e-18 83.2
MS.gene057124.t1 AT1G78200 25.267 281 156 8 1 274 1 234 2.32e-18 83.2
MS.gene057124.t1 AT5G57050 24.483 290 152 8 17 277 120 371 3.42e-18 84.7
MS.gene057124.t1 AT5G57050 24.483 290 152 8 17 277 160 411 5.43e-18 84.3
MS.gene057124.t1 AT1G78200 25.267 281 156 8 1 274 46 279 9.11e-18 82.4
MS.gene057124.t1 AT1G78200 25.267 281 156 8 1 274 46 279 9.11e-18 82.4
MS.gene057124.t1 AT1G78200 25.267 281 156 8 1 274 46 279 9.11e-18 82.4
MS.gene057124.t1 AT1G22280 25.283 265 141 8 19 274 67 283 1.24e-17 82.0
MS.gene057124.t1 AT1G22280 25.856 263 136 8 19 274 67 277 1.39e-17 81.6
MS.gene057124.t1 AT3G11410 27.341 267 142 8 1 248 117 350 1.52e-17 82.8
MS.gene057124.t1 AT4G31860 28.400 250 117 8 16 228 51 275 3.83e-17 80.5
MS.gene057124.t1 AT1G17550 23.841 302 152 8 17 277 237 501 8.55e-17 81.3
MS.gene057124.t1 AT1G17550 23.841 302 152 8 17 277 237 501 8.55e-17 81.3
MS.gene057124.t1 AT4G26080 23.724 333 170 11 1 288 141 434 1.01e-16 80.9
MS.gene057124.t1 AT1G68410 26.506 332 174 11 3 306 59 348 1.92e-16 80.1
MS.gene057124.t1 AT1G68410 26.506 332 174 11 3 306 59 348 1.92e-16 80.1
MS.gene057124.t1 AT1G68410 26.506 332 174 11 3 306 59 348 1.92e-16 80.1
MS.gene057124.t1 AT1G68410 26.506 332 174 11 3 306 59 348 1.92e-16 80.1
MS.gene057124.t1 AT1G34750 26.394 269 133 10 19 277 68 281 4.19e-16 77.4
MS.gene057124.t1 AT1G34750 26.394 269 133 10 19 277 68 281 4.19e-16 77.4
MS.gene057124.t1 AT1G34750 26.394 269 133 10 19 277 68 281 4.19e-16 77.4
MS.gene057124.t1 AT5G51760 24.085 328 161 8 1 277 91 381 2.27e-15 76.6
MS.gene057124.t1 AT5G51760 24.085 328 161 8 1 277 121 411 2.61e-15 76.6
MS.gene057124.t1 AT5G59220 28.272 191 98 6 1 168 124 298 3.43e-15 75.1
MS.gene057124.t1 AT2G34740 26.471 238 116 10 1 228 97 285 7.23e-14 71.2
MS.gene057124.t1 AT2G34740 26.471 238 116 10 1 228 115 303 1.01e-13 71.2
MS.gene057124.t1 AT5G06750 26.255 259 140 9 13 245 78 311 1.47e-13 71.2
MS.gene057124.t1 AT5G06750 26.255 259 140 9 13 245 78 311 1.47e-13 71.2
MS.gene057124.t1 AT4G38520 24.603 252 146 7 16 246 80 308 1.94e-13 70.9
MS.gene057124.t1 AT4G38520 24.603 252 146 7 16 246 80 308 1.94e-13 70.9
MS.gene057124.t1 AT5G02760 25.000 248 157 7 11 246 67 297 4.97e-13 69.3
MS.gene057124.t1 AT3G51370 25.000 248 148 9 16 245 78 305 1.85e-12 67.8
MS.gene057124.t1 AT3G51370 25.000 248 148 9 16 245 78 305 1.85e-12 67.8
MS.gene057124.t1 AT1G34750 27.189 217 103 8 19 228 68 236 1.88e-12 66.6
MS.gene057124.t1 AT5G19280 27.957 279 145 12 15 277 339 577 1.99e-12 68.2
MS.gene057124.t1 AT5G66080 24.793 242 156 7 16 245 81 308 1.60e-11 65.1
MS.gene057124.t1 AT2G40860 27.426 237 110 10 1 221 405 595 3.02e-11 64.7
MS.gene057124.t1 AT3G55050 24.696 247 152 9 16 246 83 311 6.77e-11 63.2
MS.gene057124.t1 AT3G55050 24.696 247 152 9 16 246 83 311 6.77e-11 63.2

Find 81 sgRNAs with CRISPR-Local

Find 249 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGAAACCTTGGAGACTATT+TGG 0.260980 3.1:-73699458 None:intergenic
CTTATTATTTCCTAGGAATA+TGG 0.264600 3.1:-73700346 None:intergenic
TGTTAGCATCCGATGGCTTA+TGG 0.271564 3.1:+73702419 MS.gene057124:CDS
TGAGGACTAGTTAGCAATTC+TGG 0.276029 3.1:-73700897 None:intergenic
CTGACATGAGGTTGTTAAAA+TGG 0.280042 3.1:+73700163 MS.gene057124:CDS
TTGCTGTATCCCGTGCATTT+GGG 0.314251 3.1:+73701994 MS.gene057124:CDS
AAGCTGCTAATTTCACATAT+TGG 0.316833 3.1:+73700366 MS.gene057124:CDS
ATTGCTGTATCCCGTGCATT+TGG 0.322501 3.1:+73701993 MS.gene057124:CDS
TGGAAGATGATATTATTCTT+AGG 0.339370 3.1:+73699435 MS.gene057124:CDS
AGAGTTACTTGATAAATATC+AGG 0.343230 3.1:-73702373 None:intergenic
TCTTTCGCGGCCGTGTTTGA+TGG 0.343544 3.1:+73699479 MS.gene057124:CDS
GAATTGTGTCTATTGGAATC+TGG 0.357830 3.1:+73703265 MS.gene057124:CDS
ACCGTTGGAATTGTGTCTAT+TGG 0.358693 3.1:+73703258 MS.gene057124:CDS
ATCCCTTGCACAAGTCGTTT+TGG 0.370646 3.1:+73702704 MS.gene057124:CDS
AGCATTATAATTGCCGATCT+AGG 0.371221 3.1:+73702829 MS.gene057124:CDS
TTAGCAGCTTATTATTTCCT+AGG 0.379640 3.1:-73700353 None:intergenic
ACTAGTCCTCACCGTCCATA+TGG 0.386128 3.1:+73700909 MS.gene057124:CDS
GTTAGCATCCGATGGCTTAT+GGG 0.389003 3.1:+73702420 MS.gene057124:CDS
TTGCTTCTGTCCAGTTCCTC+AGG 0.392143 3.1:+73699513 MS.gene057124:CDS
TTTAAAGGCTTGAAATGAAA+GGG 0.400684 3.1:+73700289 MS.gene057124:intron
GTGAAAAGGATGCTACAAAA+AGG 0.413005 3.1:+73702163 MS.gene057124:intron
ATAGCTAAGACCTGAGGAAC+TGG 0.414366 3.1:-73699523 None:intergenic
GGGGAGGAGGAGGATGAATC+AGG 0.415467 3.1:+73700309 MS.gene057124:CDS
TGAAATGAAAGGGGAGGAGG+AGG 0.428058 3.1:+73700299 MS.gene057124:CDS
GATATTTATCAAGTAACTCT+TGG 0.438968 3.1:+73702376 MS.gene057124:CDS
ATCAAAAGAATCAGAGAAGC+AGG 0.445855 3.1:+73700957 MS.gene057124:CDS
GGACAGAAAAGTTCATTTCC+CGG 0.447424 3.1:+73702203 MS.gene057124:CDS
GAGGCCTTGTTGCTCCCATA+TGG 0.455386 3.1:-73700924 None:intergenic
TTCCAACGGTGGCTAGGGCT+TGG 0.460560 3.1:-73703245 None:intergenic
CACAATTCCAACGGTGGCTA+GGG 0.467000 3.1:-73703250 None:intergenic
GCGGCCGTGTTTGATGGCCA+TGG 0.471142 3.1:+73699485 MS.gene057124:CDS
GCTTGAAATGAAAGGGGAGG+AGG 0.477022 3.1:+73700296 MS.gene057124:CDS
ATTACCAACGGTAGGATTTG+CGG 0.480678 3.1:+73701966 MS.gene057124:CDS
CCGTGTTTGATGGCCATGGA+GGG 0.482647 3.1:+73699489 MS.gene057124:CDS
ACACAATTCCAACGGTGGCT+AGG 0.491960 3.1:-73703251 None:intergenic
TCTCCAAGGTTTCTCTTTCG+CGG 0.496528 3.1:+73699466 MS.gene057124:CDS
ACAGCAACTGCCATATTCCT+AGG 0.507970 3.1:+73700336 MS.gene057124:CDS
CTTAGGCCAAATAGTCTCCA+AGG 0.519183 3.1:+73699452 MS.gene057124:CDS
GCTTATGGGATTACATGAGC+AGG 0.519531 3.1:+73702434 MS.gene057124:CDS
CTAGTCCTCACCGTCCATAT+GGG 0.520919 3.1:+73700910 MS.gene057124:CDS
GAATCAGAGAAGCAGGTGGA+TGG 0.523820 3.1:+73700964 MS.gene057124:CDS
AAGGAGCTCAGGAAGGAAGA+TGG 0.526606 3.1:+73702182 MS.gene057124:CDS
TGCTGTATCCCGTGCATTTG+GGG 0.527648 3.1:+73701995 MS.gene057124:CDS
GCATTATAATTGCCGATCTA+GGG 0.535217 3.1:+73702830 MS.gene057124:CDS
TTTATAGTGTTAGCATCCGA+TGG 0.544491 3.1:+73702412 MS.gene057124:CDS
GTGCTTGCAGGAAGACAGAC+TGG 0.546345 3.1:+73703178 MS.gene057124:intron
CGGCCGCGAAAGAGAAACCT+TGG 0.549935 3.1:-73699469 None:intergenic
GTCCAAGCCCTAGCCACCGT+TGG 0.555090 3.1:+73703243 MS.gene057124:CDS
ACAAAATACATACCCTAGAT+CGG 0.557827 3.1:-73702842 None:intergenic
ATCGCATGTCCCCAAATGCA+CGG 0.559501 3.1:-73702004 None:intergenic
CCCTCCATGGCCATCAAACA+CGG 0.563996 3.1:-73699489 None:intergenic
TGTACAGTTCAAAGATGACT+TGG 0.565147 3.1:+73702339 MS.gene057124:CDS
AATCAGAGAAGCAGGTGGAT+GGG 0.572153 3.1:+73700965 MS.gene057124:CDS
TGTTGAAGAAGCATTAAAGC+AGG 0.576690 3.1:+73700128 MS.gene057124:CDS
TCGCATGTCCCCAAATGCAC+GGG 0.578399 3.1:-73702003 None:intergenic
TACCAAAACGACTTGTGCAA+GGG 0.580364 3.1:-73702706 None:intergenic
GAGTGTCTTGAAGCTCTACA+AGG 0.580723 3.1:+73700072 MS.gene057124:CDS
TTACCAAAACGACTTGTGCA+AGG 0.581838 3.1:-73702707 None:intergenic
TTAAAGGCTTGAAATGAAAG+GGG 0.583830 3.1:+73700290 MS.gene057124:intron
CTACAGGGATGAGTTATACA+AGG 0.587623 3.1:+73700050 MS.gene057124:intron
GGACAGAAGCAAACCCTCCA+TGG 0.588408 3.1:-73699502 None:intergenic
ATCTCCGCAAATCCTACCGT+TGG 0.588610 3.1:-73701970 None:intergenic
GAGTTACTTGATAAATATCA+GGG 0.596312 3.1:-73702372 None:intergenic
GTCTTGAAGCTCTACAAGGT+GGG 0.604160 3.1:+73700076 MS.gene057124:CDS
CATGTAATCCCATAAGCCAT+CGG 0.609703 3.1:-73702428 None:intergenic
GCCGTGTTTGATGGCCATGG+AGG 0.611537 3.1:+73699488 MS.gene057124:CDS
AAGGCTTGAAATGAAAGGGG+AGG 0.613590 3.1:+73700293 MS.gene057124:intron
ACATATTGGTGACTCATCTG+TGG 0.614996 3.1:+73700380 MS.gene057124:CDS
TTCTTTAGATTACCAACGGT+AGG 0.622788 3.1:+73701958 MS.gene057124:intron
CCTTGTTGCTCCCATATGGA+CGG 0.623217 3.1:-73700920 None:intergenic
CCGTCCATATGGGAGCAACA+AGG 0.639612 3.1:+73700920 MS.gene057124:CDS
CATTTGTTAAAGCTGACATG+AGG 0.639772 3.1:+73700151 MS.gene057124:CDS
AGGGATCAACTACGAAAACA+TGG 0.647059 3.1:+73702568 MS.gene057124:CDS
TCCAATAGACACAATTCCAA+CGG 0.647966 3.1:-73703259 None:intergenic
TTGCTCCCATATGGACGGTG+AGG 0.659175 3.1:-73700915 None:intergenic
AAAAGAATCAGAGAAGCAGG+TGG 0.661475 3.1:+73700960 MS.gene057124:CDS
TGTCTTGAAGCTCTACAAGG+TGG 0.664593 3.1:+73700075 MS.gene057124:CDS
TGACATTATCCTGTGTACAT+TGG 0.665504 3.1:-73702807 None:intergenic
ACGAAAACATGGAAACACAC+AGG 0.687122 3.1:+73702579 MS.gene057124:CDS
TCTGCAGGACCAATGTACAC+AGG 0.707211 3.1:+73702798 MS.gene057124:intron
AATAGACACAATTCCAACGG+TGG 0.712558 3.1:-73703256 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAATGAAAATAAAATTC+TGG + chr3.1:73701192-73701211 MS.gene057124:intron 10.0%
!!! TTTTTTTTTTTTTTTCACAA+AGG - chr3.1:73702925-73702944 None:intergenic 10.0%
!! AAATTTACAAAATCAATACA+AGG - chr3.1:73699627-73699646 None:intergenic 15.0%
!! ATTAATTAATTATGTGTGTT+TGG + chr3.1:73699579-73699598 MS.gene057124:intron 15.0%
!! ATTTAATAAAACTCATATTC+TGG + chr3.1:73702957-73702976 MS.gene057124:intron 15.0%
!! TTAATTAATTATGTGTGTTT+GGG + chr3.1:73699580-73699599 MS.gene057124:intron 15.0%
!! TTTGAATTTCATTGATATTT+AGG + chr3.1:73701717-73701736 MS.gene057124:intron 15.0%
!!! ATAATTAATCTGATGTTTTA+TGG + chr3.1:73701251-73701270 MS.gene057124:intron 15.0%
!!! CATCTCTTTTTTAATAATAT+TGG - chr3.1:73701494-73701513 None:intergenic 15.0%
!!! CTTTTTTAATAATATTGGAT+AGG - chr3.1:73701489-73701508 None:intergenic 15.0%
!!! TAATTAATCTGATGTTTTAT+GGG + chr3.1:73701252-73701271 MS.gene057124:intron 15.0%
!!! TCATTTTGAATAATTTGTTT+AGG + chr3.1:73701440-73701459 MS.gene057124:intron 15.0%
!!! TTAATCAATTTTATTCATGT+AGG + chr3.1:73700854-73700873 MS.gene057124:intron 15.0%
!!! TTTTATTTAATTTACCTTGA+TGG + chr3.1:73701839-73701858 MS.gene057124:intron 15.0%
!! AAACACAATCCTAATAAAAT+AGG + chr3.1:73701619-73701638 MS.gene057124:intron 20.0%
!! ATAAATCATACATTTGACTA+GGG + chr3.1:73700746-73700765 MS.gene057124:intron 20.0%
!! ATAAATTCCTTTATACTAGA+AGG - chr3.1:73702075-73702094 None:intergenic 20.0%
!! ATATAAAAAATGAAGGAACA+AGG - chr3.1:73700999-73701018 None:intergenic 20.0%
!! GAAATATATTGTTTCCAATA+AGG + chr3.1:73701338-73701357 MS.gene057124:intron 20.0%
!! TAATTAATTATGTGTGTTTG+GGG + chr3.1:73699581-73699600 MS.gene057124:intron 20.0%
!! TAGTTAAAAGCTTATAACAT+AGG + chr3.1:73699744-73699763 MS.gene057124:intron 20.0%
!!! AAAACCAATTTTGTATTCTT+AGG + chr3.1:73700495-73700514 MS.gene057124:intron 20.0%
!!! AAAGAGCATATAAAAAATGA+AGG - chr3.1:73701006-73701025 None:intergenic 20.0%
!!! AATTAATCTGATGTTTTATG+GGG + chr3.1:73701253-73701272 MS.gene057124:intron 20.0%
!!! AGACAGTATTTTGTTTTTAA+AGG + chr3.1:73700274-73700293 MS.gene057124:intron 20.0%
!!! ATAACAAATCTAGAATCATT+TGG - chr3.1:73700230-73700249 None:intergenic 20.0%
!!! ATTTGTTATGATTACATTGA+AGG + chr3.1:73700241-73700260 MS.gene057124:intron 20.0%
!!! TGATTTCATGATTTTGTTTT+GGG - chr3.1:73701664-73701683 None:intergenic 20.0%
!!! TTCAAAAAATGGAAAAGTAT+CGG - chr3.1:73700713-73700732 None:intergenic 20.0%
!!! TTGATTTCATGATTTTGTTT+TGG - chr3.1:73701665-73701684 None:intergenic 20.0%
! AAATAACAAAAACAGTTGAG+GGG + chr3.1:73701519-73701538 MS.gene057124:intron 25.0%
! AAGGAATGATTTAGAGATTA+AGG - chr3.1:73702056-73702075 None:intergenic 25.0%
! AATCATTCCTTCTAGTATAA+AGG + chr3.1:73702065-73702084 MS.gene057124:intron 25.0%
! ACTACCTAAGAATACAAAAT+TGG - chr3.1:73700502-73700521 None:intergenic 25.0%
! AGAAATAACAAAAACAGTTG+AGG + chr3.1:73701517-73701536 MS.gene057124:intron 25.0%
! AGAGTTACTTGATAAATATC+AGG - chr3.1:73702376-73702395 None:intergenic 25.0%
! ATCATTCAACTAGAATATCT+AGG + chr3.1:73700804-73700823 MS.gene057124:intron 25.0%
! CATAAATCATACATTTGACT+AGG + chr3.1:73700745-73700764 MS.gene057124:intron 25.0%
! CTAATATCCAACTACAAATT+AGG + chr3.1:73701687-73701706 MS.gene057124:intron 25.0%
! CTACTTACTTAGTTACATAT+CGG + chr3.1:73700647-73700666 MS.gene057124:intron 25.0%
! CTTATTATTTCCTAGGAATA+TGG - chr3.1:73700349-73700368 None:intergenic 25.0%
! GAAATAACAAAAACAGTTGA+GGG + chr3.1:73701518-73701537 MS.gene057124:intron 25.0%
! GAGTTACTTGATAAATATCA+GGG - chr3.1:73702375-73702394 None:intergenic 25.0%
! GATATTTATCAAGTAACTCT+TGG + chr3.1:73702376-73702395 MS.gene057124:CDS 25.0%
! GTCAAAAAGACATCAATTTA+TGG + chr3.1:73701379-73701398 MS.gene057124:intron 25.0%
! GTTGTAGATACTTCAAAAAA+TGG - chr3.1:73700724-73700743 None:intergenic 25.0%
! TACTTACTTAGTTACATATC+GGG + chr3.1:73700648-73700667 MS.gene057124:intron 25.0%
! TAGAGAATTTCAAATGTGTT+TGG - chr3.1:73699960-73699979 None:intergenic 25.0%
! TCATTCAACTAGAATATCTA+GGG + chr3.1:73700805-73700824 MS.gene057124:intron 25.0%
! TGCCAAAAACTTTATATTTG+AGG + chr3.1:73702604-73702623 MS.gene057124:intron 25.0%
! TGGAAGATGATATTATTCTT+AGG + chr3.1:73699435-73699454 MS.gene057124:CDS 25.0%
! TGTTTCTTTATTATGAAAGC+CGG + chr3.1:73699697-73699716 MS.gene057124:intron 25.0%
! TTCAAACTACACTTTATTGA+AGG + chr3.1:73701773-73701792 MS.gene057124:intron 25.0%
! TTGTCATGTATATATGACTT+TGG + chr3.1:73702861-73702880 MS.gene057124:intron 25.0%
! TTGTTTAAATCCTAAACCTT+TGG - chr3.1:73703034-73703053 None:intergenic 25.0%
! TTTAAAGGCTTGAAATGAAA+GGG + chr3.1:73700289-73700308 MS.gene057124:intron 25.0%
!! TGCCTCAAATATAAAGTTTT+TGG - chr3.1:73702609-73702628 None:intergenic 25.0%
!! TTATTTTCATAAGTGGTACA+TGG - chr3.1:73699802-73699821 None:intergenic 25.0%
!! TTGAAGGTCATTCTTTTAAT+TGG + chr3.1:73701789-73701808 MS.gene057124:intron 25.0%
!!! TCAAAAAATGGAAAAGTATC+GGG - chr3.1:73700712-73700731 None:intergenic 25.0%
!!! TGAAGGTCATTCTTTTAATT+GGG + chr3.1:73701790-73701809 MS.gene057124:intron 25.0%
!!! TTGAGTTTGGTCAATTTTTT+TGG + chr3.1:73701024-73701043 MS.gene057124:intron 25.0%
!!! TTTCAGCTTATTTTCATAAG+TGG - chr3.1:73699809-73699828 None:intergenic 25.0%
!!! TTTTAAAGGCTTGAAATGAA+AGG + chr3.1:73700288-73700307 MS.gene057124:intron 25.0%
!!! TTTTATATGCTCTTTGAGTT+TGG + chr3.1:73701011-73701030 MS.gene057124:intron 25.0%
!!! TTTTTGCTTTTGTTTGAGTT+TGG - chr3.1:73701551-73701570 None:intergenic 25.0%
!!! TTTTTGGTTTTAAAGAGTCT+AGG + chr3.1:73701040-73701059 MS.gene057124:intron 25.0%
AAAATCACACTTACAAAGTG+TGG + chr3.1:73701067-73701086 MS.gene057124:intron 30.0%
AAGCTGCTAATTTCACATAT+TGG + chr3.1:73700366-73700385 MS.gene057124:CDS 30.0%
ACAAAATACATACCCTAGAT+CGG - chr3.1:73702845-73702864 None:intergenic 30.0%
ACATACATAAGATTACCTAC+CGG - chr3.1:73702225-73702244 None:intergenic 30.0%
ATGACATTTGTGTCTTTAGT+TGG + chr3.1:73700549-73700568 MS.gene057124:intron 30.0%
ATTATGAGTTGTGACAACTT+AGG + chr3.1:73701222-73701241 MS.gene057124:intron 30.0%
CAGCAATTACGTTCTATAAT+TGG + chr3.1:73702888-73702907 MS.gene057124:intron 30.0%
CATTCAACTAGAATATCTAG+GGG + chr3.1:73700806-73700825 MS.gene057124:intron 30.0%
CCTAATAAAATAGGACAGTT+CGG + chr3.1:73701628-73701647 MS.gene057124:intron 30.0%
CGTGCTTTCATTATATAGAA+CGG - chr3.1:73701901-73701920 None:intergenic 30.0%
CGTTCTATATAATGAAAGCA+CGG + chr3.1:73701899-73701918 MS.gene057124:intron 30.0%
CTAAAGACACAAATGTCATT+TGG - chr3.1:73700548-73700567 None:intergenic 30.0%
CTTATCCAAACAAATTACAC+CGG - chr3.1:73699719-73699738 None:intergenic 30.0%
GAACAAGCAGAATATTATTG+CGG - chr3.1:73702664-73702683 None:intergenic 30.0%
GACAACGTTCATTTCAAAAA+TGG - chr3.1:73701877-73701896 None:intergenic 30.0%
TAAAACTCATATTCTGGTCA+TGG + chr3.1:73702963-73702982 MS.gene057124:intron 30.0%
TAAGCTAACAAACATGAGAA+AGG - chr3.1:73699559-73699578 None:intergenic 30.0%
TCAGGTGATAGGAAATTAAT+TGG + chr3.1:73701417-73701436 MS.gene057124:intron 30.0%
TTAAAGGCTTGAAATGAAAG+GGG + chr3.1:73700290-73700309 MS.gene057124:intron 30.0%
TTAGCAGCTTATTATTTCCT+AGG - chr3.1:73700356-73700375 None:intergenic 30.0%
! AATTGATGTCTTTTTGACAG+TGG - chr3.1:73701377-73701396 None:intergenic 30.0%
! ATATCACTAGAGCATTAATG+TGG + chr3.1:73703007-73703026 MS.gene057124:intron 30.0%
! CCTTTTCTTTAGATTACCAA+CGG + chr3.1:73701954-73701973 MS.gene057124:intron 30.0%
! GACACGTTTTATGTATTAAC+TGG - chr3.1:73700193-73700212 None:intergenic 30.0%
! TATCAGACATGTATCGATAT+TGG + chr3.1:73700674-73700693 MS.gene057124:intron 30.0%
!! ACTAAGCTTTAGAACATGTT+TGG - chr3.1:73699925-73699944 None:intergenic 30.0%
!! CAAAAAATGGAAAAGTATCG+GGG - chr3.1:73700711-73700730 None:intergenic 30.0%
!!! AGGATTGTGTTTTTAGAGAT+AGG - chr3.1:73701611-73701630 None:intergenic 30.0%
!!! TCTTTTGATTTCTTGAAGAG+AGG - chr3.1:73700946-73700965 None:intergenic 30.0%
!!! TTTTTTTCACAAAGGCATAG+CGG - chr3.1:73702917-73702936 None:intergenic 30.0%
AACAATCAAACCACAACACT+TGG - chr3.1:73701309-73701328 None:intergenic 35.0%
AATAAGCTGAAAACAGCTCA+TGG + chr3.1:73699817-73699836 MS.gene057124:intron 35.0%
AGATTGTTTGGGAAAGCTTA+TGG - chr3.1:73699861-73699880 None:intergenic 35.0%
AGCACTCAATATAAAACGCA+TGG - chr3.1:73703163-73703182 None:intergenic 35.0%
AGCATTATAATTGCCGATCT+AGG + chr3.1:73702829-73702848 MS.gene057124:CDS 35.0%
ATAGTGTGCATTTGCTCTTA+TGG - chr3.1:73699983-73700002 None:intergenic 35.0%
ATCAAAAGAATCAGAGAAGC+AGG + chr3.1:73700957-73700976 MS.gene057124:CDS 35.0%
ATTGTGAAGGTAATTCTCTG+CGG - chr3.1:73702510-73702529 None:intergenic 35.0%
CACTTGGTAAAACTAGGAAA+TGG - chr3.1:73701293-73701312 None:intergenic 35.0%
CATACATAAGATTACCTACC+GGG - chr3.1:73702224-73702243 None:intergenic 35.0%
CTGACATGAGGTTGTTAAAA+TGG + chr3.1:73700163-73700182 MS.gene057124:CDS 35.0%
CTTAGGTAGTAATGTATCGA+AGG + chr3.1:73700512-73700531 MS.gene057124:intron 35.0%
GAACACTAGTGAGATTGTTT+GGG - chr3.1:73699872-73699891 None:intergenic 35.0%
GAATTGTGTCTATTGGAATC+TGG + chr3.1:73703265-73703284 MS.gene057124:CDS 35.0%
GCAAAAGGTAGATAACACTT+AGG - chr3.1:73702141-73702160 None:intergenic 35.0%
GCATTATAATTGCCGATCTA+GGG + chr3.1:73702830-73702849 MS.gene057124:CDS 35.0%
GTAACTGATTGGAACCTTAT+TGG - chr3.1:73701355-73701374 None:intergenic 35.0%
GTGAAAAGGATGCTACAAAA+AGG + chr3.1:73702163-73702182 MS.gene057124:intron 35.0%
TCCAATAGACACAATTCCAA+CGG - chr3.1:73703262-73703281 None:intergenic 35.0%
TGAACACTAGTGAGATTGTT+TGG - chr3.1:73699873-73699892 None:intergenic 35.0%
TGACATTATCCTGTGTACAT+TGG - chr3.1:73702810-73702829 None:intergenic 35.0%
TGTACAGTTCAAAGATGACT+TGG + chr3.1:73702339-73702358 MS.gene057124:CDS 35.0%
TTAATGTGGTCCAAAGGTTT+AGG + chr3.1:73703021-73703040 MS.gene057124:intron 35.0%
TTAATTTCCTATCACCTGAC+AGG - chr3.1:73701416-73701435 None:intergenic 35.0%
TTCTTTAGATTACCAACGGT+AGG + chr3.1:73701958-73701977 MS.gene057124:intron 35.0%
TTGAATATAGCTAAGACCTG+AGG - chr3.1:73699532-73699551 None:intergenic 35.0%
TTTATAGTGTTAGCATCCGA+TGG + chr3.1:73702412-73702431 MS.gene057124:CDS 35.0%
TTTCATAAGTGGTACATGGT+AGG - chr3.1:73699798-73699817 None:intergenic 35.0%
! AAGGGTAGCAGAAATGATTT+TGG - chr3.1:73702475-73702494 None:intergenic 35.0%
! AGGGTAGCAGAAATGATTTT+GGG - chr3.1:73702474-73702493 None:intergenic 35.0%
! ATGAGCACCTAATTTGTAGT+TGG - chr3.1:73701697-73701716 None:intergenic 35.0%
! CATTGTGCATGTTTTATGAG+AGG - chr3.1:73700433-73700452 None:intergenic 35.0%
! CATTTGTTAAAGCTGACATG+AGG + chr3.1:73700151-73700170 MS.gene057124:CDS 35.0%
! CCGAACTGTCCTATTTTATT+AGG - chr3.1:73701631-73701650 None:intergenic 35.0%
! GTTTTATATTGAGTGCTTGC+AGG + chr3.1:73703166-73703185 MS.gene057124:intron 35.0%
! TTTTGACAGTGGTAACTGAT+TGG - chr3.1:73701366-73701385 None:intergenic 35.0%
!! ATGTAGGTTTTATGCAGATC+TGG + chr3.1:73700870-73700889 MS.gene057124:intron 35.0%
!! CCGTTGGTAATCTAAAGAAA+AGG - chr3.1:73701957-73701976 None:intergenic 35.0%
!! GCTTTAGAACATGTTTGGAT+TGG - chr3.1:73699920-73699939 None:intergenic 35.0%
!! GGTCATTCTTTTAATTGGGT+TGG + chr3.1:73701794-73701813 MS.gene057124:intron 35.0%
!! GTTTTATGAGAGGCACAATA+AGG - chr3.1:73700423-73700442 None:intergenic 35.0%
!! TGTTGAAGAAGCATTAAAGC+AGG + chr3.1:73700128-73700147 MS.gene057124:CDS 35.0%
!!! CACTTAGGAAGCATTTTAAC+AGG - chr3.1:73702126-73702145 None:intergenic 35.0%
!!! TTACCTTGATGGTGCAATTT+TGG + chr3.1:73701850-73701869 MS.gene057124:intron 35.0%
!!! TTCTGCTACCCTTCTTTTTT+TGG + chr3.1:73702482-73702501 MS.gene057124:intron 35.0%
!!! TTGGTTTTGTGACACATTCA+TGG - chr3.1:73700483-73700502 None:intergenic 35.0%
AAAAGAATCAGAGAAGCAGG+TGG + chr3.1:73700960-73700979 MS.gene057124:CDS 40.0%
AAGTCAGCTTAGACGGTAAA+AGG - chr3.1:73701150-73701169 None:intergenic 40.0%
AATAGACACAATTCCAACGG+TGG - chr3.1:73703259-73703278 None:intergenic 40.0%
ACCGTTGGAATTGTGTCTAT+TGG + chr3.1:73703258-73703277 MS.gene057124:CDS 40.0%
ACGAAAACATGGAAACACAC+AGG + chr3.1:73702579-73702598 MS.gene057124:CDS 40.0%
ACTTACAAAGTGTGGAGAAG+AGG + chr3.1:73701075-73701094 MS.gene057124:intron 40.0%
AGAAAAGTTCATTTCCCGGT+AGG + chr3.1:73702207-73702226 MS.gene057124:intron 40.0%
AGGGATCAACTACGAAAACA+TGG + chr3.1:73702568-73702587 MS.gene057124:CDS 40.0%
AGTTGTGACAACTTAGGATG+TGG + chr3.1:73701228-73701247 MS.gene057124:intron 40.0%
ATTACCAACGGTAGGATTTG+CGG + chr3.1:73701966-73701985 MS.gene057124:CDS 40.0%
CAAGGATAGCAAGATTGTGA+AGG - chr3.1:73702523-73702542 None:intergenic 40.0%
CATGTAATCCCATAAGCCAT+CGG - chr3.1:73702431-73702450 None:intergenic 40.0%
CCACAACACTTGGTAAAACT+AGG - chr3.1:73701299-73701318 None:intergenic 40.0%
CTACAGGGATGAGTTATACA+AGG + chr3.1:73700050-73700069 MS.gene057124:intron 40.0%
CTGCGGAACCAAAAAAAGAA+GGG - chr3.1:73702493-73702512 None:intergenic 40.0%
CTTACAAAGTGTGGAGAAGA+GGG + chr3.1:73701076-73701095 MS.gene057124:intron 40.0%
GAGAAACCTTGGAGACTATT+TGG - chr3.1:73699461-73699480 None:intergenic 40.0%
GGACAGAAAAGTTCATTTCC+CGG + chr3.1:73702203-73702222 MS.gene057124:CDS 40.0%
GTATAACTCATCCCTGTAGT+TGG - chr3.1:73700049-73700068 None:intergenic 40.0%
GTCATCTTTGAACTGTACAC+TGG - chr3.1:73702338-73702357 None:intergenic 40.0%
TACCAAAACGACTTGTGCAA+GGG - chr3.1:73702709-73702728 None:intergenic 40.0%
TCCATTATGATACACTCTGC+AGG + chr3.1:73702783-73702802 MS.gene057124:intron 40.0%
TCCTGCAGAGTGTATCATAA+TGG - chr3.1:73702787-73702806 None:intergenic 40.0%
TCTGCGGAACCAAAAAAAGA+AGG - chr3.1:73702494-73702513 None:intergenic 40.0%
TTACCAAAACGACTTGTGCA+AGG - chr3.1:73702710-73702729 None:intergenic 40.0%
! ACATATTGGTGACTCATCTG+TGG + chr3.1:73700380-73700399 MS.gene057124:CDS 40.0%
! AGACGCAGTTTCTTTTGTGA+GGG + chr3.1:73702549-73702568 MS.gene057124:CDS 40.0%
! AGAGCATTAATGTGGTCCAA+AGG + chr3.1:73703015-73703034 MS.gene057124:intron 40.0%
! GGGTAGCAGAAATGATTTTG+GGG - chr3.1:73702473-73702492 None:intergenic 40.0%
! GTATCGATATTGGATAGCGT+CGG + chr3.1:73700684-73700703 MS.gene057124:intron 40.0%
! TATAATGAAAGCACGGTGCA+TGG + chr3.1:73701906-73701925 MS.gene057124:intron 40.0%
! TATGAGAGGCACAATAAGGA+TGG - chr3.1:73700419-73700438 None:intergenic 40.0%
! TCTACCTTTTGCGTGTGAAA+AGG + chr3.1:73702149-73702168 MS.gene057124:intron 40.0%
! TTACCGTCTAAGCTGACTTT+CGG + chr3.1:73701151-73701170 MS.gene057124:intron 40.0%
!! GAAAGCCGGTGTAATTTGTT+TGG + chr3.1:73699711-73699730 MS.gene057124:intron 40.0%
!! TGAGGACTAGTTAGCAATTC+TGG - chr3.1:73700900-73700919 None:intergenic 40.0%
!!! CCTAGTTTTACCAAGTGTTG+TGG + chr3.1:73701296-73701315 MS.gene057124:intron 40.0%
AAGGCTTGAAATGAAAGGGG+AGG + chr3.1:73700293-73700312 MS.gene057124:intron 45.0%
AATCAGAGAAGCAGGTGGAT+GGG + chr3.1:73700965-73700984 MS.gene057124:CDS 45.0%
ACAGCAACTGCCATATTCCT+AGG + chr3.1:73700336-73700355 MS.gene057124:CDS 45.0%
AGTGTGGAGAAGAGGGTTAT+TGG + chr3.1:73701083-73701102 MS.gene057124:intron 45.0%
ATAGCTAAGACCTGAGGAAC+TGG - chr3.1:73699526-73699545 None:intergenic 45.0%
ATTGCTGTATCCCGTGCATT+TGG + chr3.1:73701993-73702012 MS.gene057124:CDS 45.0%
CGGAGACATTTGATGTGTTG+GGG - chr3.1:73701124-73701143 None:intergenic 45.0%
CTACAAAAAGGAGCTCAGGA+AGG + chr3.1:73702175-73702194 MS.gene057124:CDS 45.0%
CTATCACCTGACAGGCTAAA+GGG - chr3.1:73701408-73701427 None:intergenic 45.0%
CTTAGGCCAAATAGTCTCCA+AGG + chr3.1:73699452-73699471 MS.gene057124:CDS 45.0%
GAGTGTCTTGAAGCTCTACA+AGG + chr3.1:73700072-73700091 MS.gene057124:CDS 45.0%
GATGCTACAAAAAGGAGCTC+AGG + chr3.1:73702171-73702190 MS.gene057124:CDS 45.0%
GCGGAGACATTTGATGTGTT+GGG - chr3.1:73701125-73701144 None:intergenic 45.0%
GCTTAGACGGTAAAAGGTTG+CGG - chr3.1:73701144-73701163 None:intergenic 45.0%
GCTTATGGGATTACATGAGC+AGG + chr3.1:73702434-73702453 MS.gene057124:CDS 45.0%
GGTCCAAAATTGCACCATCA+AGG - chr3.1:73701856-73701875 None:intergenic 45.0%
GTCTTGAAGCTCTACAAGGT+GGG + chr3.1:73700076-73700095 MS.gene057124:CDS 45.0%
GTTAGCATCCGATGGCTTAT+GGG + chr3.1:73702420-73702439 MS.gene057124:CDS 45.0%
TATTATTGCGGCTGCTTCGA+TGG - chr3.1:73702652-73702671 None:intergenic 45.0%
TCATCCCTGTAGTTGGCATT+TGG - chr3.1:73700042-73700061 None:intergenic 45.0%
TCTCCAAGGTTTCTCTTTCG+CGG + chr3.1:73699466-73699485 MS.gene057124:CDS 45.0%
TGCGGAGACATTTGATGTGT+TGG - chr3.1:73701126-73701145 None:intergenic 45.0%
TGTCTTGAAGCTCTACAAGG+TGG + chr3.1:73700075-73700094 MS.gene057124:CDS 45.0%
TGTGCCAAATGCCAACTACA+GGG + chr3.1:73700035-73700054 MS.gene057124:intron 45.0%
TGTTAGCATCCGATGGCTTA+TGG + chr3.1:73702419-73702438 MS.gene057124:CDS 45.0%
TTGCTGTATCCCGTGCATTT+GGG + chr3.1:73701994-73702013 MS.gene057124:CDS 45.0%
! ATCCCTTGCACAAGTCGTTT+TGG + chr3.1:73702704-73702723 MS.gene057124:CDS 45.0%
! CAGACGCAGTTTCTTTTGTG+AGG + chr3.1:73702548-73702567 MS.gene057124:CDS 45.0%
! GCATCCTTTTCACACGCAAA+AGG - chr3.1:73702156-73702175 None:intergenic 45.0%
! GTGACATTTTGTTGCTGCAG+TGG - chr3.1:73703213-73703232 None:intergenic 45.0%
! TACCGTCTAAGCTGACTTTC+GGG + chr3.1:73701152-73701171 MS.gene057124:intron 45.0%
AAGGAGCTCAGGAAGGAAGA+TGG + chr3.1:73702182-73702201 MS.gene057124:CDS 50.0%
ACACAATTCCAACGGTGGCT+AGG - chr3.1:73703254-73703273 None:intergenic 50.0%
ACATTTGATGTGTTGGGGCG+TGG - chr3.1:73701119-73701138 None:intergenic 50.0%
ACTAGTCCTCACCGTCCATA+TGG + chr3.1:73700909-73700928 MS.gene057124:CDS 50.0%
ATCGCATGTCCCCAAATGCA+CGG - chr3.1:73702007-73702026 None:intergenic 50.0%
ATCTCCGCAAATCCTACCGT+TGG - chr3.1:73701973-73701992 None:intergenic 50.0%
CACAATTCCAACGGTGGCTA+GGG - chr3.1:73703253-73703272 None:intergenic 50.0%
CCTATCACCTGACAGGCTAA+AGG - chr3.1:73701409-73701428 None:intergenic 50.0%
CCTTGTTGCTCCCATATGGA+CGG - chr3.1:73700923-73700942 None:intergenic 50.0%
CCTTTAGCCTGTCAGGTGAT+AGG + chr3.1:73701406-73701425 MS.gene057124:intron 50.0%
CTAGTCCTCACCGTCCATAT+GGG + chr3.1:73700910-73700929 MS.gene057124:CDS 50.0%
CTGTGCCAAATGCCAACTAC+AGG + chr3.1:73700034-73700053 MS.gene057124:intron 50.0%
GAATCAGAGAAGCAGGTGGA+TGG + chr3.1:73700964-73700983 MS.gene057124:CDS 50.0%
GCTTGAAATGAAAGGGGAGG+AGG + chr3.1:73700296-73700315 MS.gene057124:CDS 50.0%
GTCCCGAAAGTCAGCTTAGA+CGG - chr3.1:73701157-73701176 None:intergenic 50.0%
TCTGCAGGACCAATGTACAC+AGG + chr3.1:73702798-73702817 MS.gene057124:intron 50.0%
TGAAATGAAAGGGGAGGAGG+AGG + chr3.1:73700299-73700318 MS.gene057124:CDS 50.0%
TGCTGTATCCCGTGCATTTG+GGG + chr3.1:73701995-73702014 MS.gene057124:CDS 50.0%
TTGCTTCTGTCCAGTTCCTC+AGG + chr3.1:73699513-73699532 MS.gene057124:CDS 50.0%
! TAAGCTGACTTTCGGGACTC+TGG + chr3.1:73701159-73701178 MS.gene057124:intron 50.0%
!! CATGTTGCACAGAAGTGCTC+TGG + chr3.1:73703070-73703089 MS.gene057124:intron 50.0%
CCCTCCATGGCCATCAAACA+CGG - chr3.1:73699492-73699511 None:intergenic 55.0%
CCGTCCATATGGGAGCAACA+AGG + chr3.1:73700920-73700939 MS.gene057124:CDS 55.0%
GAAACTGCGTCTGAGCTGCA+AGG - chr3.1:73702541-73702560 None:intergenic 55.0%
GGACAGAAGCAAACCCTCCA+TGG - chr3.1:73699505-73699524 None:intergenic 55.0%
GTGCTTGCAGGAAGACAGAC+TGG + chr3.1:73703178-73703197 MS.gene057124:intron 55.0%
TCGCATGTCCCCAAATGCAC+GGG - chr3.1:73702006-73702025 None:intergenic 55.0%
TCTTTCGCGGCCGTGTTTGA+TGG + chr3.1:73699479-73699498 MS.gene057124:CDS 55.0%
TGGTCTCCCTTTAGCCTGTC+AGG + chr3.1:73701399-73701418 MS.gene057124:intron 55.0%
TTGCTCCCATATGGACGGTG+AGG - chr3.1:73700918-73700937 None:intergenic 55.0%
! CCGTGTTTGATGGCCATGGA+GGG + chr3.1:73699489-73699508 MS.gene057124:CDS 55.0%
!! GAGGCCTTGTTGCTCCCATA+TGG - chr3.1:73700927-73700946 None:intergenic 55.0%
CGGCCGCGAAAGAGAAACCT+TGG - chr3.1:73699472-73699491 None:intergenic 60.0%
GGGGAGGAGGAGGATGAATC+AGG + chr3.1:73700309-73700328 MS.gene057124:CDS 60.0%
TTCCAACGGTGGCTAGGGCT+TGG - chr3.1:73703248-73703267 None:intergenic 60.0%
! GCCGTGTTTGATGGCCATGG+AGG + chr3.1:73699488-73699507 MS.gene057124:CDS 60.0%
GTCCAAGCCCTAGCCACCGT+TGG + chr3.1:73703243-73703262 MS.gene057124:CDS 65.0%
! GCGGCCGTGTTTGATGGCCA+TGG + chr3.1:73699485-73699504 MS.gene057124:CDS 65.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 73699434 73703311 73699434 ID=MS.gene057124
chr3.1 mRNA 73699434 73703311 73699434 ID=MS.gene057124.t1;Parent=MS.gene057124
chr3.1 exon 73699434 73699534 73699434 ID=MS.gene057124.t1.exon1;Parent=MS.gene057124.t1
chr3.1 CDS 73699434 73699534 73699434 ID=cds.MS.gene057124.t1;Parent=MS.gene057124.t1
chr3.1 exon 73700056 73700184 73700056 ID=MS.gene057124.t1.exon2;Parent=MS.gene057124.t1
chr3.1 CDS 73700056 73700184 73700056 ID=cds.MS.gene057124.t1;Parent=MS.gene057124.t1
chr3.1 exon 73700296 73700401 73700296 ID=MS.gene057124.t1.exon3;Parent=MS.gene057124.t1
chr3.1 CDS 73700296 73700401 73700296 ID=cds.MS.gene057124.t1;Parent=MS.gene057124.t1
chr3.1 exon 73700876 73700986 73700876 ID=MS.gene057124.t1.exon4;Parent=MS.gene057124.t1
chr3.1 CDS 73700876 73700986 73700876 ID=cds.MS.gene057124.t1;Parent=MS.gene057124.t1
chr3.1 exon 73701966 73702045 73701966 ID=MS.gene057124.t1.exon5;Parent=MS.gene057124.t1
chr3.1 CDS 73701966 73702045 73701966 ID=cds.MS.gene057124.t1;Parent=MS.gene057124.t1
chr3.1 exon 73702171 73702224 73702171 ID=MS.gene057124.t1.exon6;Parent=MS.gene057124.t1
chr3.1 CDS 73702171 73702224 73702171 ID=cds.MS.gene057124.t1;Parent=MS.gene057124.t1
chr3.1 exon 73702339 73702455 73702339 ID=MS.gene057124.t1.exon7;Parent=MS.gene057124.t1
chr3.1 CDS 73702339 73702455 73702339 ID=cds.MS.gene057124.t1;Parent=MS.gene057124.t1
chr3.1 exon 73702546 73702600 73702546 ID=MS.gene057124.t1.exon8;Parent=MS.gene057124.t1
chr3.1 CDS 73702546 73702600 73702546 ID=cds.MS.gene057124.t1;Parent=MS.gene057124.t1
chr3.1 exon 73702693 73702725 73702693 ID=MS.gene057124.t1.exon9;Parent=MS.gene057124.t1
chr3.1 CDS 73702693 73702725 73702693 ID=cds.MS.gene057124.t1;Parent=MS.gene057124.t1
chr3.1 exon 73702805 73702851 73702805 ID=MS.gene057124.t1.exon10;Parent=MS.gene057124.t1
chr3.1 CDS 73702805 73702851 73702805 ID=cds.MS.gene057124.t1;Parent=MS.gene057124.t1
chr3.1 exon 73703188 73703311 73703188 ID=MS.gene057124.t1.exon11;Parent=MS.gene057124.t1
chr3.1 CDS 73703188 73703311 73703188 ID=cds.MS.gene057124.t1;Parent=MS.gene057124.t1
Gene Sequence

>MS.gene057124

ATGGAAGATGATATTATTCTTAGGCCAAATAGTCTCCAAGGTTTCTCTTTCGCGGCCGTGTTTGATGGCCATGGAGGGTTTGCTTCTGTCCAGTTCCTCAGGTCTTAGCTATATTCAATTTTCCTTTCTCATGTTTGTTAGCTTAATTAATTAATTATGTGTGTTTGGGGCGAGCTTTTGATCAAAATAGCCTTGTATTGATTTTGTAAATTTGATTTGATTTGATTATAATCGAGTTTGAAGTGAAGTTAGTGATCTTTCGATGTTTCTTTATTATGAAAGCCGGTGTAATTTGTTTGGATAAGCAACTTAGTTAAAAGCTTATAACATAGGTGCTTATCATTTAAGTGCTTATGTATAACCTACCATGTACCACTTATGAAAATAAGCTGAAAACAGCTCATGGACATGTCATAAGATGTTTCCATAAGCTTTCCCAAACAATCTCACTAGTGTTCATTTCACTAGATATACTCAGATAAGCCAATCCAAACATGTTCTAAAGCTTAGTGTAAATTTTGAACCAAACACATTTGAAATTCTCTACCATAAGAGCAAATGCACACTATAATTATTTGCATAATCTAAATTGTTGATTTTCTGTGCCAAATGCCAACTACAGGGATGAGTTATACAAGGAGTGTCTTGAAGCTCTACAAGGTGGGTTACTATTGCTTGAGAAAGATTTCAAAGCTGTTGAAGAAGCATTAAAGCAGGCATTTGTTAAAGCTGACATGAGGTTGTTAAAATGGTAAGCCAGTTAATACATAAAACGTGTCTAATTCAATAGTTTCCAAATGATTCTAGATTTGTTATGATTACATTGAAGGTTTAGACTTTAGACAGTATTTTGTTTTTAAAGGCTTGAAATGAAAGGGGAGGAGGAGGATGAATCAGGTGCTACAGCAACTGCCATATTCCTAGGAAATAATAAGCTGCTAATTTCACATATTGGTGACTCATCTGTGGTATGTATTATAATCCATCCTTATTGTGCCTCTCATAAAACATGCACAATGTTCGTAGTAGAAAGAATATTCTTTCTACCATGAATGTGTCACAAAACCAATTTTGTATTCTTAGGTAGTAATGTATCGAAGGTGTGTCGTATCCAAATGACATTTGTGTCTTTAGTTGGTAAGAAGTATTGAAAATGTTTCTCAGAAGTATCTATTAATTTTTTTTTGAAGAGAATTAAAAGTATTGCTGTATACTACTTACTTAGTTACATATCGGGAAGTATCAGACATGTATCGATATTGGATAGCGTCGGACCCCGATACTTTTCCATTTTTTGAAGTATCTACAACTCATAAATCATACATTTGACTAGGGCTACTTCTTTATATTTAATCAATTTTATGATATTTATCATTCAACTAGAATATCTAGGGGATTGAATGTCATCAAAATCACATGATTAATCAATTTTATTCATGTAGGTTTTATGCAGATCTGGAAAACCAGAATTGCTAACTAGTCCTCACCGTCCATATGGGAGCAACAAGGCCTCTCTTCAAGAAATCAAAAGAATCAGAGAAGCAGGTGGATGGGTGTGTTTTCCTTGTTCCTTCATTTTTTATATGCTCTTTGAGTTTGGTCAATTTTTTTGGTTTTAAAGAGTCTAGGAGCAAAAATCACACTTACAAAGTGTGGAGAAGAGGGTTATTGGCGATTCGAATCCACGCCCCAACACATCAAATGTCTCCGCAACCTTTTACCGTCTAAGCTGACTTTCGGGACTCTGGTCATATTTCTATATAATGAAAATAAAATTCTGGTTCGAAAATTATGAGTTGTGACAACTTAGGATGTGGATAATTAATCTGATGTTTTATGGGGCATATAGCTATTTTCCATTTCCTAGTTTTACCAAGTGTTGTGGTTTGATTGTTTGAGAACATGAAATATATTGTTTCCAATAAGGTTCCAATCAGTTACCACTGTCAAAAAGACATCAATTTATGGTCTCCCTTTAGCCTGTCAGGTGATAGGAAATTAATTGGTCATTTTGAATAATTTGTTTAGGTAAACTTGATAAGTGCAAAAGCACCTATCCAATATTATTAAAAAAGAGATGAAAAGAAATAACAAAAACAGTTGAGGGGACTAGACCAAACTCAAACAAAAGCAAAAAGAAACAAAAGAAAAAACAAATAGTTTAGTACACGATACCTATCTCTAAAAACACAATCCTAATAAAATAGGACAGTTCGGACAGATAACTCCCAAAACAAAATCATGAAATCAAAGCTAATATCCAACTACAAATTAGGTGCTCATTTTGAATTTCATTGATATTTAGGAGCTCATATTCTCACTTAGTTTATAGTATAAGCTTCAAACTACACTTTATTGAAGGTCATTCTTTTAATTGGGTTGGCAGTCTCTTTTGTTTTCATAGTTTTTATTTAATTTACCTTGATGGTGCAATTTTGGACCATTTTTGAAATGAACGTTGTCGCCGTTCTATATAATGAAAGCACGGTGCATGGCTGATGATTACTCAAATGTGTACTGCCTTTTCTTTAGATTACCAACGGTAGGATTTGCGGAGATATTGCTGTATCCCGTGCATTTGGGGACATGCGATTCAAAACAAAGAAGATCGAGTACATTCCTTAATCTCTAAATCATTCCTTCTAGTATAAAGGAATTTATTTATTCTAAATTGTTAATATCTTCTACTCCTGTTAAAATGCTTCCTAAGTGTTATCTACCTTTTGCGTGTGAAAAGGATGCTACAAAAAGGAGCTCAGGAAGGAAGATGGACAGAAAAGTTCATTTCCCGGTAGGTAATCTTATGTATGTCTTATAACAAACGCATTAAAATTGCGTGTTGTATTATATTAAAATTGAGCTTTTAACTAATTTAAGTTTTAATCTAATCATTTCTGTTGACCAGTGTACAGTTCAAAGATGACTTGGTTGTTGCACGCCCTGATATTTATCAAGTAACTCTTGGCTCAGATGCAGAATTTATAGTGTTAGCATCCGATGGCTTATGGGATTACATGAGCAGGTTTATTTTTTGATCCCCAAAATCATTTCTGCTACCCTTCTTTTTTTGGTTCCGCAGAGAATTACCTTCACAATCTTGCTATCCTTGCAGCTCAGACGCAGTTTCTTTTGTGAGGGATCAACTACGAAAACATGGAAACACACAGGTATGCCAAAAACTTTATATTTGAGGCATTTTGATTCATATTGATAAACCATCGAAGCAGCCGCAATAATATTCTGCTTGTTCATATTTCAGCTAGCTTGTGAATCCCTTGCACAAGTCGTTTTGGTAAGTTATAATAAATTATGTAGCAGTTATTATCATGAACTTGTACAGTTTTAGTAATCCATTATGATACACTCTGCAGGACCAATGTACACAGGATAATGTCAGCATTATAATTGCCGATCTAGGGTATGTATTTTGTCATGTATATATGACTTTGGACATCAGCAATTACGTTCTATAATTGGCTACCGCTATGCCTTTGTGAAAAAAAAAAAAAAAACTGTGATTAGCATTTAATAAAACTCATATTCTGGTCATGGAAGTTCTTTCTAGATACTATCATATCACTAGAGCATTAATGTGGTCCAAAGGTTTAGGATTTAAACAAATATGAAAAACTAGAACATGTTGCACAGAAGTGCTCTGGTCGTTATATACACATGTATAGAAAACATATATTTTGTAAATAATTTTTTTTATTTTTATATTAATTACCATGCGTTTTATATTGAGTGCTTGCAGGAAGACAGACTGGAAGAGTGTACCACTGCAGCAACAAAATGTCACATTTGAGCTAGTCCAAGCCCTAGCCACCGTTGGAATTGTGTCTATTGGAATCTGGTTTTCATCACAGCTTTCTTTATAG

Protein sequence

>MS.gene057124.t1

MEDDIILRPNSLQGFSFAAVFDGHGGFASVQFLRDELYKECLEALQGGLLLLEKDFKAVEEALKQAFVKADMRLLKWLEMKGEEEDESGATATAIFLGNNKLLISHIGDSSVVLCRSGKPELLTSPHRPYGSNKASLQEIKRIREAGGWITNGRICGDIAVSRAFGDMRFKTKKIEMLQKGAQEGRWTEKFISRVQFKDDLVVARPDIYQVTLGSDAEFIVLASDGLWDYMSSSDAVSFVRDQLRKHGNTQLACESLAQVVLDQCTQDNVSIIIADLGKTDWKSVPLQQQNVTFELVQALATVGIVSIGIWFSSQLSL