AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene052340


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052340.t1 MTR_4g076940 98.557 693 10 0 1 693 1 693 0.0 1410
MS.gene052340.t1 MTR_4g076940 98.557 693 10 0 1 693 41 733 0.0 1410
MS.gene052340.t1 MTR_4g076940 98.500 600 9 0 94 693 1 600 0.0 1222
MS.gene052340.t1 MTR_4g076900 88.485 660 75 1 33 692 9 667 0.0 1211
MS.gene052340.t1 MTR_4g076970 65.657 693 233 3 1 692 1 689 0.0 964
MS.gene052340.t1 MTR_6g066240 58.372 639 263 3 33 671 47 682 0.0 756
MS.gene052340.t1 MTR_4g094050 47.745 643 309 7 30 659 50 678 0.0 606
MS.gene052340.t1 MTR_4g094060 47.656 640 312 6 30 659 50 676 0.0 597
MS.gene052340.t1 MTR_4g094010 45.753 671 333 9 1 659 3 654 0.0 593
MS.gene052340.t1 MTR_4g094090 44.231 624 324 9 26 643 6 611 0.0 538
MS.gene052340.t1 MTR_4g054020 46.007 576 289 7 87 654 4 565 1.67e-176 516
MS.gene052340.t1 MTR_4g093845 44.013 618 318 10 33 643 41 637 2.16e-176 518
MS.gene052340.t1 MTR_2g095390 38.499 613 354 12 30 635 104 700 4.44e-128 396
MS.gene052340.t1 MTR_1g108340 29.646 678 414 16 35 690 75 711 7.41e-79 266
MS.gene052340.t1 MTR_1g108340 29.646 678 414 16 35 690 75 711 8.40e-79 266
MS.gene052340.t1 MTR_1g054960 30.820 610 374 13 39 636 9 582 8.58e-78 260
MS.gene052340.t1 MTR_1g115790 32.270 533 343 5 50 567 119 648 2.65e-75 258
MS.gene052340.t1 MTR_2g079980 31.271 598 359 17 51 635 29 587 5.22e-72 245
MS.gene052340.t1 MTR_1g096580 34.821 448 270 10 53 493 90 522 5.19e-71 244
MS.gene052340.t1 MTR_1g054935 30.254 552 357 11 51 590 7 542 5.44e-71 242
MS.gene052340.t1 MTR_1g054935 29.843 573 372 12 32 590 148 704 1.18e-70 244
MS.gene052340.t1 MTR_1g093990 30.198 606 371 18 50 636 87 659 2.36e-70 242
MS.gene052340.t1 MTR_5g025470 30.693 606 367 16 51 636 63 635 3.92e-69 238
MS.gene052340.t1 MTR_7g100120 30.672 551 348 9 50 586 124 654 1.31e-68 239
MS.gene052340.t1 MTR_2g078080 31.029 622 358 18 36 635 32 604 5.34e-68 234
MS.gene052340.t1 MTR_7g106880 29.402 602 378 14 51 637 7 576 1.15e-67 233
MS.gene052340.t1 MTR_8g093840 30.083 605 394 11 46 638 49 636 1.79e-67 234
MS.gene052340.t1 MTR_7g106880 28.732 623 395 15 32 637 137 727 5.62e-67 234
MS.gene052340.t1 MTR_8g059150 29.133 611 365 18 47 635 60 624 4.13e-64 224
MS.gene052340.t1 MTR_3g096410 28.900 609 390 14 48 638 53 636 6.56e-64 224
MS.gene052340.t1 MTR_5g096390 40.120 334 180 6 51 378 107 426 1.79e-63 224
MS.gene052340.t1 MTR_1g099570 29.346 535 336 10 49 579 46 542 8.25e-62 218
MS.gene052340.t1 MTR_2g101090 29.027 565 348 14 52 597 870 1400 9.98e-56 206
MS.gene052340.t1 MTR_2g101090 25.569 571 353 16 113 637 221 765 3.15e-35 144
MS.gene052340.t1 MTR_2g102670 29.433 547 325 16 53 573 838 1349 3.19e-54 202
MS.gene052340.t1 MTR_2g102670 26.746 587 332 24 49 582 159 700 1.12e-35 145
MS.gene052340.t1 MTR_2g102660 29.250 547 326 16 53 573 855 1366 1.31e-53 200
MS.gene052340.t1 MTR_2g102660 27.226 584 351 18 49 582 159 718 1.13e-43 170
MS.gene052340.t1 MTR_4g116540 26.520 592 400 12 53 638 75 637 4.15e-53 194
MS.gene052340.t1 MTR_7g098780 28.571 546 327 13 53 574 845 1351 4.73e-53 198
MS.gene052340.t1 MTR_7g098780 26.941 631 391 17 53 637 175 781 1.87e-47 181
MS.gene052340.t1 MTR_4g011630 28.702 547 329 17 53 573 866 1377 1.74e-52 197
MS.gene052340.t1 MTR_4g011630 25.674 631 399 16 53 637 173 779 3.74e-44 171
MS.gene052340.t1 MTR_7g101780 26.594 643 384 16 47 644 508 1107 2.26e-52 196
MS.gene052340.t1 MTR_7g104150 25.796 628 406 15 37 640 866 1457 3.98e-52 196
MS.gene052340.t1 MTR_7g104150 25.303 577 376 12 38 572 165 728 1.59e-39 157
MS.gene052340.t1 MTR_2g102640 28.962 549 325 17 53 573 858 1369 4.94e-52 195
MS.gene052340.t1 MTR_2g102640 27.211 588 347 20 49 585 159 716 3.74e-43 168
MS.gene052340.t1 MTR_3g463680 27.538 650 400 19 36 637 147 773 2.17e-51 193
MS.gene052340.t1 MTR_3g463680 26.199 542 347 16 52 574 842 1349 2.13e-46 178
MS.gene052340.t1 MTR_4g011620 28.546 564 330 14 53 584 856 1378 2.41e-51 193
MS.gene052340.t1 MTR_4g011620 25.037 675 423 17 53 674 161 805 5.15e-46 177
MS.gene052340.t1 MTR_1g094660 40.856 257 144 4 33 286 501 752 2.42e-51 193
MS.gene052340.t1 MTR_1g094660 40.856 257 144 4 33 286 501 752 3.31e-51 192
MS.gene052340.t1 MTR_1g063920 28.596 570 335 16 33 558 477 1018 6.42e-51 192
MS.gene052340.t1 MTR_1g011650 27.243 613 376 17 52 641 876 1441 7.51e-51 192
MS.gene052340.t1 MTR_1g011650 25.183 683 435 18 52 687 165 818 1.98e-41 163
MS.gene052340.t1 MTR_7g098740 28.885 547 324 14 53 574 841 1347 8.88e-51 191
MS.gene052340.t1 MTR_7g098740 25.237 634 398 17 53 637 162 768 7.24e-45 174
MS.gene052340.t1 MTR_7g098760 28.022 546 330 13 53 574 880 1386 1.32e-50 191
MS.gene052340.t1 MTR_7g098760 26.299 635 390 21 53 637 162 768 2.14e-46 178
MS.gene052340.t1 MTR_8g014360 27.256 543 334 11 52 568 904 1411 2.33e-50 190
MS.gene052340.t1 MTR_8g014360 25.496 706 432 25 45 689 166 838 9.58e-44 170
MS.gene052340.t1 MTR_4g011640 27.370 559 343 15 53 584 863 1385 3.20e-50 190
MS.gene052340.t1 MTR_4g011640 26.158 669 417 18 20 635 131 775 1.84e-44 172
MS.gene052340.t1 MTR_8g107450 42.623 244 136 3 53 294 69 310 3.66e-50 188
MS.gene052340.t1 MTR_8g107450 23.659 317 214 8 347 640 502 813 1.96e-15 80.9
MS.gene052340.t1 MTR_7g098800 29.032 589 349 17 20 574 756 1309 5.84e-50 189
MS.gene052340.t1 MTR_7g098800 26.700 603 371 16 53 613 133 706 1.52e-45 176
MS.gene052340.t1 MTR_7g104100 26.634 612 390 12 52 640 880 1455 1.05e-49 188
MS.gene052340.t1 MTR_7g104100 25.915 656 389 21 45 637 170 791 4.40e-45 174
MS.gene052340.t1 MTR_7g098320 27.486 553 343 14 53 580 875 1394 2.31e-48 184
MS.gene052340.t1 MTR_7g098320 25.592 633 397 18 53 637 158 764 5.71e-43 168
MS.gene052340.t1 MTR_1g011640 26.215 679 413 19 3 641 788 1418 3.58e-48 184
MS.gene052340.t1 MTR_1g011640 26.877 666 399 24 49 660 148 779 4.90e-39 155
MS.gene052340.t1 MTR_7g104130 25.490 612 384 13 52 632 882 1452 1.19e-47 182
MS.gene052340.t1 MTR_7g104130 27.304 586 353 18 38 572 165 728 6.06e-41 162
MS.gene052340.t1 MTR_7g098370 27.728 559 315 16 53 574 841 1347 3.50e-47 181
MS.gene052340.t1 MTR_7g098370 25.394 634 397 18 53 637 162 768 1.28e-42 167
MS.gene052340.t1 MTR_1g050525 26.560 625 374 17 52 640 893 1468 8.91e-47 179
MS.gene052340.t1 MTR_1g050525 25.884 707 417 24 47 688 170 834 3.94e-43 168
MS.gene052340.t1 MTR_7g098750 26.667 540 345 10 53 574 883 1389 1.09e-46 179
MS.gene052340.t1 MTR_7g098750 26.341 634 391 19 53 637 162 768 2.04e-45 175
MS.gene052340.t1 MTR_7g098750 26.667 540 345 10 53 574 613 1119 1.58e-46 178
MS.gene052340.t1 MTR_7g098750 26.000 500 333 15 151 637 23 498 1.09e-31 132
MS.gene052340.t1 MTR_5g030910 42.449 245 127 4 53 290 51 288 2.65e-46 176
MS.gene052340.t1 MTR_5g030910 23.247 271 196 8 373 640 462 723 3.41e-12 70.1
MS.gene052340.t1 MTR_5g070320 27.461 579 338 19 50 572 162 714 6.55e-46 177
MS.gene052340.t1 MTR_5g070320 25.612 613 407 14 37 632 841 1421 5.48e-43 168
MS.gene052340.t1 MTR_7g104110 26.306 555 364 10 52 591 874 1398 1.52e-45 176
MS.gene052340.t1 MTR_7g104110 26.425 579 367 13 38 572 159 722 1.79e-44 172
MS.gene052340.t1 MTR_7g098750 26.731 520 333 9 53 557 883 1369 1.74e-45 176
MS.gene052340.t1 MTR_7g098750 26.341 634 391 19 53 637 162 768 1.94e-45 175
MS.gene052340.t1 MTR_3g107870 27.656 546 338 14 52 573 889 1401 1.78e-45 176
MS.gene052340.t1 MTR_3g107870 25.781 640 403 17 53 645 166 780 8.39e-45 173
MS.gene052340.t1 MTR_4g123850 24.653 649 422 16 53 658 168 792 5.13e-45 174
MS.gene052340.t1 MTR_4g123850 24.387 652 416 16 13 631 808 1415 7.99e-45 173
MS.gene052340.t1 MTR_7g104130 26.806 526 324 11 52 552 882 1371 9.66e-45 173
MS.gene052340.t1 MTR_7g104130 27.474 586 352 18 38 572 165 728 5.88e-41 161
MS.gene052340.t1 MTR_7g098300 27.536 552 321 15 53 574 879 1381 1.62e-44 172
MS.gene052340.t1 MTR_7g098300 25.276 633 399 18 53 637 162 768 8.25e-44 170
MS.gene052340.t1 MTR_4g058000 40.856 257 144 4 33 286 491 742 2.75e-44 171
MS.gene052340.t1 MTR_8g014360 25.496 706 432 25 45 689 166 838 1.49e-43 169
MS.gene052340.t1 MTR_8g014360 27.778 432 265 8 52 466 904 1305 7.50e-42 164
MS.gene052340.t1 MTR_1g492950 25.293 597 351 14 52 608 893 1434 4.16e-43 168
MS.gene052340.t1 MTR_1g492950 27.523 654 383 26 41 637 179 798 2.45e-40 160
MS.gene052340.t1 MTR_7g098320 25.592 633 397 18 53 637 158 764 5.30e-43 168
MS.gene052340.t1 MTR_7g098320 28.810 420 256 10 53 457 875 1266 7.96e-39 155
MS.gene052340.t1 MTR_5g070320 25.612 613 407 14 37 632 650 1230 5.32e-43 168
MS.gene052340.t1 MTR_5g070320 25.660 530 316 18 95 572 20 523 9.83e-33 136
MS.gene052340.t1 MTR_4g113070 27.357 541 342 13 52 574 843 1350 6.45e-43 167
MS.gene052340.t1 MTR_4g113070 25.793 694 431 21 53 692 150 813 6.62e-40 158
MS.gene052340.t1 MTR_5g070320 25.612 613 407 14 37 632 554 1134 7.65e-43 167
MS.gene052340.t1 MTR_5g070320 26.712 438 277 14 153 572 16 427 2.56e-31 131
MS.gene052340.t1 MTR_7g098890 26.696 457 297 9 48 492 779 1209 1.07e-35 145
MS.gene052340.t1 MTR_7g098890 22.137 655 431 16 53 675 136 743 3.30e-32 134
MS.gene052340.t1 MTR_3g040670 38.117 223 133 4 73 291 201 422 3.53e-32 130
MS.gene052340.t1 MTR_4g094020 36.406 217 93 4 235 447 168 343 5.72e-31 124
MS.gene052340.t1 MTR_7g407080 24.684 474 259 14 114 560 170 572 2.69e-25 111
MS.gene052340.t1 MTR_7g091350 56.757 74 29 1 33 106 3 73 4.47e-21 90.9
MS.gene052340.t1 MTR_7g091350 57.500 80 34 0 177 256 81 160 2.31e-20 89.0
MS.gene052340.t1 MTR_8g103450 30.242 248 128 9 3 236 191 407 2.26e-20 94.7
MS.gene052340.t1 MTR_7g079540 32.171 258 128 11 37 267 87 324 5.07e-19 89.7
MS.gene052340.t1 MTR_4g089130 52.564 78 37 0 174 251 6 83 1.35e-18 81.6
MS.gene052340.t1 MTR_7g079540 32.227 211 110 7 37 230 87 281 3.22e-18 86.7
MS.gene052340.t1 MTR_1567s0010 29.469 207 128 7 64 264 253 447 1.39e-13 73.9
MS.gene052340.t1 MTR_6g009080 32.243 214 130 8 49 253 226 433 1.54e-13 73.9
MS.gene052340.t1 MTR_6g012535 27.962 211 137 6 53 256 16 218 2.28e-13 70.5
MS.gene052340.t1 MTR_1g059830 29.245 212 129 6 52 254 395 594 4.44e-13 72.8
MS.gene052340.t1 MTR_4g053980 52.542 59 28 0 30 88 46 104 7.68e-13 66.2
MS.gene052340.t1 MTR_6g009110 31.776 214 131 8 49 253 1031 1238 8.54e-13 72.4
MS.gene052340.t1 MTR_6g009150 30.233 215 133 8 49 253 1030 1237 1.04e-12 72.4
MS.gene052340.t1 MTR_6g008800 31.944 216 128 9 49 253 1020 1227 1.24e-12 72.0
MS.gene052340.t1 MTR_4g081190 31.373 204 109 10 49 238 1003 1189 1.86e-12 71.6
MS.gene052340.t1 MTR_4g081190 30.804 224 138 9 49 266 356 568 3.30e-12 70.5
MS.gene052340.t1 MTR_1g086150 32.323 198 115 8 49 238 397 583 2.07e-12 71.2
MS.gene052340.t1 MTR_7g051100 32.338 201 103 10 63 246 384 568 2.51e-12 70.9
MS.gene052340.t1 MTR_7g051100 29.515 227 140 10 49 266 1008 1223 5.09e-11 66.6
MS.gene052340.t1 MTR_3g437990 25.510 196 127 6 65 254 556 738 2.63e-12 70.9
MS.gene052340.t1 MTR_4g109720 28.704 216 140 8 49 259 400 606 2.86e-12 70.5
MS.gene052340.t1 MTR_4g108153 25.541 231 157 7 36 262 573 792 5.15e-12 69.7
MS.gene052340.t1 MTR_3g099990 25.000 196 128 6 65 254 556 738 7.42e-12 69.3
MS.gene052340.t1 MTR_6g009200 30.568 229 138 10 37 253 1021 1240 8.38e-12 69.3
MS.gene052340.t1 MTR_6g009030 31.481 216 129 9 49 253 1012 1219 1.03e-11 68.9
MS.gene052340.t1 MTR_7g033710 27.602 221 129 9 53 259 442 645 1.12e-11 68.6
MS.gene052340.t1 MTR_1g086080 31.818 198 116 8 49 238 402 588 1.15e-11 68.9
MS.gene052340.t1 MTR_3g086430 29.630 216 137 8 49 259 1014 1219 1.20e-11 68.9
MS.gene052340.t1 MTR_6g465300 31.313 198 119 8 49 238 484 672 1.34e-11 68.2
MS.gene052340.t1 MTR_6g465300 31.313 198 119 8 49 238 484 672 1.39e-11 68.2
MS.gene052340.t1 MTR_5g075955 28.448 232 138 9 51 272 479 692 1.50e-11 68.2
MS.gene052340.t1 MTR_5g075955 28.767 219 131 8 51 259 367 570 1.95e-11 67.8
MS.gene052340.t1 MTR_2g018320 31.250 192 110 6 49 230 372 551 2.51e-11 67.8
MS.gene052340.t1 MTR_6g009070 30.233 215 133 8 49 253 947 1154 2.54e-11 67.8
MS.gene052340.t1 MTR_4g123990 31.481 216 117 9 37 238 379 577 3.07e-11 67.4
MS.gene052340.t1 MTR_3g080220 31.579 209 111 9 37 230 396 587 3.75e-11 67.4
MS.gene052340.t1 MTR_3g107800 30.189 212 125 7 37 238 397 595 5.08e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052340.t1 AT3G21090 73.958 672 169 1 27 692 19 690 0.0 1070
MS.gene052340.t1 AT1G51500 73.134 670 176 3 27 692 18 687 0.0 1022
MS.gene052340.t1 AT1G51460 60.805 671 252 2 32 692 9 678 0.0 850
MS.gene052340.t1 AT1G17840 59.680 625 246 5 33 656 50 669 0.0 726
MS.gene052340.t1 AT2G28070 37.175 616 362 8 30 637 111 709 2.29e-129 400
MS.gene052340.t1 AT2G28070 37.175 616 362 8 30 637 111 709 2.29e-129 400
MS.gene052340.t1 AT2G01320 31.429 560 354 11 35 586 72 609 8.12e-83 275
MS.gene052340.t1 AT2G01320 31.429 560 354 11 35 586 72 609 8.12e-83 275
MS.gene052340.t1 AT2G01320 31.429 560 354 11 35 586 72 609 1.44e-82 276
MS.gene052340.t1 AT2G01320 31.429 560 354 11 35 586 72 609 2.15e-82 276
MS.gene052340.t1 AT2G01320 31.429 560 354 11 35 586 72 609 2.15e-82 276
MS.gene052340.t1 AT2G01320 31.429 560 354 11 35 586 72 609 2.31e-82 276
MS.gene052340.t1 AT2G39350 33.148 540 338 7 50 572 106 639 2.39e-77 263
MS.gene052340.t1 AT2G01320 32.618 466 288 7 35 493 72 518 8.25e-77 256
MS.gene052340.t1 AT2G01320 32.618 466 288 7 35 493 72 518 8.25e-77 256
MS.gene052340.t1 AT3G55090 32.156 538 344 5 50 572 104 635 3.35e-76 259
MS.gene052340.t1 AT3G55100 32.887 523 303 10 45 547 41 535 8.54e-75 254
MS.gene052340.t1 AT3G55100 32.887 523 303 10 45 547 41 535 8.54e-75 254
MS.gene052340.t1 AT1G31770 31.086 608 360 15 47 635 75 642 5.84e-74 251
MS.gene052340.t1 AT3G55110 30.931 569 364 9 51 611 89 636 8.84e-73 249
MS.gene052340.t1 AT3G55130 30.612 637 383 11 51 640 97 721 2.25e-72 249
MS.gene052340.t1 AT5G13580 32.477 545 313 8 50 567 105 621 5.10e-72 248
MS.gene052340.t1 AT2G37360 31.041 538 356 7 50 580 130 659 5.15e-72 248
MS.gene052340.t1 AT1G71960 32.285 604 365 21 51 636 81 658 1.27e-71 245
MS.gene052340.t1 AT5G06530 31.203 532 341 11 32 547 156 678 1.62e-70 243
MS.gene052340.t1 AT5G06530 31.203 532 341 11 32 547 156 678 3.64e-70 243
MS.gene052340.t1 AT5G06530 31.203 532 341 11 32 547 156 678 3.64e-70 243
MS.gene052340.t1 AT2G13610 29.079 619 394 11 36 636 45 636 7.29e-69 238
MS.gene052340.t1 AT3G53510 31.354 539 344 7 50 580 123 643 8.21e-69 239
MS.gene052340.t1 AT4G27420 34.848 462 247 11 47 488 60 487 1.38e-68 237
MS.gene052340.t1 AT3G25620 28.671 572 364 11 6 547 31 588 2.31e-67 234
MS.gene052340.t1 AT4G25750 30.405 592 350 15 53 635 30 568 1.06e-65 227
MS.gene052340.t1 AT5G06530 31.504 492 314 10 70 547 1 483 1.00e-64 223
MS.gene052340.t1 AT3G13220 31.827 531 329 12 51 568 104 614 1.31e-63 224
MS.gene052340.t1 AT1G53270 29.174 593 359 13 51 638 48 584 4.21e-63 221
MS.gene052340.t1 AT3G25620 32.634 429 252 8 6 407 31 449 4.74e-63 217
MS.gene052340.t1 AT5G19410 27.379 599 384 14 53 642 75 631 5.02e-62 219
MS.gene052340.t1 AT5G19410 27.379 599 384 14 53 642 66 622 5.94e-62 218
MS.gene052340.t1 AT1G15210 29.268 574 358 13 52 608 866 1408 2.26e-56 208
MS.gene052340.t1 AT1G15210 25.577 563 358 12 53 572 184 728 1.81e-39 157
MS.gene052340.t1 AT5G52860 29.027 596 359 16 49 635 40 580 2.81e-56 202
MS.gene052340.t1 AT1G59870 27.855 578 361 14 52 608 893 1435 2.47e-54 202
MS.gene052340.t1 AT1G59870 24.465 654 415 18 44 647 177 801 7.50e-43 167
MS.gene052340.t1 AT3G53480 26.993 552 361 11 37 574 860 1383 2.41e-53 199
MS.gene052340.t1 AT3G53480 26.029 680 394 27 53 665 189 826 7.22e-46 177
MS.gene052340.t1 AT2G37010 30.172 464 277 11 33 468 484 928 1.28e-52 197
MS.gene052340.t1 AT2G37010 30.172 464 277 11 33 468 484 928 1.28e-52 197
MS.gene052340.t1 AT1G15520 27.899 552 327 15 53 573 852 1363 2.10e-52 196
MS.gene052340.t1 AT1G15520 27.740 584 341 18 41 572 159 713 1.01e-46 179
MS.gene052340.t1 AT3G30842 29.760 541 327 15 53 574 848 1354 2.52e-52 196
MS.gene052340.t1 AT3G30842 27.225 573 327 22 53 566 161 702 3.93e-43 168
MS.gene052340.t1 AT1G53390 28.620 587 344 16 33 572 507 1065 5.39e-52 195
MS.gene052340.t1 AT3G16340 27.402 562 354 14 52 589 835 1366 3.01e-51 193
MS.gene052340.t1 AT3G16340 26.995 589 342 17 33 567 142 696 7.93e-45 174
MS.gene052340.t1 AT3G16340 27.402 562 354 14 52 589 840 1371 4.64e-51 192
MS.gene052340.t1 AT3G16340 26.871 588 349 15 33 567 142 701 2.92e-46 178
MS.gene052340.t1 AT4G15230 26.221 614 386 15 47 637 742 1311 5.97e-51 192
MS.gene052340.t1 AT4G15230 24.373 718 436 25 22 674 41 716 2.89e-49 187
MS.gene052340.t1 AT4G15230 26.221 614 386 15 47 637 821 1390 6.64e-51 192
MS.gene052340.t1 AT4G15230 24.373 718 436 25 22 674 120 795 4.84e-49 186
MS.gene052340.t1 AT4G15230 26.221 614 386 15 47 637 821 1390 6.64e-51 192
MS.gene052340.t1 AT4G15230 24.373 718 436 25 22 674 120 795 4.84e-49 186
MS.gene052340.t1 AT2G29940 27.414 580 364 14 52 607 852 1398 7.51e-51 192
MS.gene052340.t1 AT2G29940 27.551 588 343 16 38 572 163 720 2.13e-49 187
MS.gene052340.t1 AT4G15230 24.373 718 436 25 22 674 120 795 3.91e-49 186
MS.gene052340.t1 AT4G15230 27.644 539 327 14 47 563 821 1318 1.48e-48 185
MS.gene052340.t1 AT4G15215 27.656 546 344 16 47 574 808 1320 8.78e-49 186
MS.gene052340.t1 AT4G15215 24.051 711 440 22 22 674 114 782 1.54e-43 169
MS.gene052340.t1 AT4G15215 27.656 546 344 16 47 574 808 1320 8.78e-49 186
MS.gene052340.t1 AT4G15215 24.051 711 440 22 22 674 114 782 1.54e-43 169
MS.gene052340.t1 AT4G15215 27.656 546 344 16 47 574 808 1320 8.78e-49 186
MS.gene052340.t1 AT4G15215 24.051 711 440 22 22 674 114 782 1.54e-43 169
MS.gene052340.t1 AT4G15215 27.656 546 344 16 47 574 808 1320 8.78e-49 186
MS.gene052340.t1 AT4G15215 24.051 711 440 22 22 674 114 782 1.54e-43 169
MS.gene052340.t1 AT4G15215 27.523 545 346 15 47 574 815 1327 9.57e-49 186
MS.gene052340.t1 AT4G15215 23.769 711 449 21 22 674 114 789 6.73e-44 171
MS.gene052340.t1 AT4G15215 27.523 545 346 15 47 574 815 1327 9.57e-49 186
MS.gene052340.t1 AT4G15215 23.769 711 449 21 22 674 114 789 6.73e-44 171
MS.gene052340.t1 AT4G15215 27.523 545 346 15 47 574 815 1327 9.57e-49 186
MS.gene052340.t1 AT4G15215 23.769 711 449 21 22 674 114 789 6.73e-44 171
MS.gene052340.t1 AT4G15215 27.523 545 346 15 47 574 815 1327 9.57e-49 186
MS.gene052340.t1 AT4G15215 23.769 711 449 21 22 674 114 789 6.73e-44 171
MS.gene052340.t1 AT4G15215 27.523 545 346 15 47 574 815 1327 9.57e-49 186
MS.gene052340.t1 AT4G15215 23.769 711 449 21 22 674 114 789 6.73e-44 171
MS.gene052340.t1 AT4G15215 27.523 545 346 15 47 574 818 1330 1.13e-48 185
MS.gene052340.t1 AT4G15215 23.769 711 449 21 22 674 117 792 6.68e-44 171
MS.gene052340.t1 AT4G15215 27.656 546 344 16 47 574 811 1323 1.18e-48 185
MS.gene052340.t1 AT4G15215 24.051 711 440 22 22 674 117 785 1.63e-43 169
MS.gene052340.t1 AT2G37280 25.197 635 397 16 52 637 153 758 2.04e-48 184
MS.gene052340.t1 AT2G37280 25.906 552 365 11 37 573 823 1345 3.90e-48 184
MS.gene052340.t1 AT2G37280 24.926 674 419 18 22 637 114 758 2.24e-48 184
MS.gene052340.t1 AT2G37280 26.012 519 340 9 52 557 839 1326 2.12e-47 181
MS.gene052340.t1 AT4G15236 26.632 582 356 19 47 600 811 1349 2.56e-48 184
MS.gene052340.t1 AT4G15236 24.408 676 412 23 44 659 143 779 6.60e-42 164
MS.gene052340.t1 AT2G37280 25.906 552 365 11 37 573 852 1374 3.85e-48 184
MS.gene052340.t1 AT2G37280 23.592 746 446 22 22 680 114 822 1.92e-44 172
MS.gene052340.t1 AT2G37280 25.933 536 354 10 52 573 681 1187 5.28e-48 183
MS.gene052340.t1 AT2G37280 24.211 665 418 18 65 680 8 635 5.80e-45 174
MS.gene052340.t1 AT4G15233 25.758 594 346 19 47 600 804 1342 2.15e-47 181
MS.gene052340.t1 AT4G15233 24.522 628 382 22 66 637 159 750 4.85e-38 152
MS.gene052340.t1 AT2G26910 27.799 536 340 13 52 568 844 1351 2.31e-47 181
MS.gene052340.t1 AT2G26910 25.360 694 419 23 46 680 143 796 9.11e-41 161
MS.gene052340.t1 AT4G15233 25.758 594 346 19 47 600 795 1333 2.43e-47 181
MS.gene052340.t1 AT4G15233 25.589 637 398 23 39 637 143 741 4.82e-45 174
MS.gene052340.t1 AT4G15233 25.758 594 346 19 47 600 751 1289 2.65e-47 181
MS.gene052340.t1 AT4G15233 24.885 655 398 23 39 637 81 697 3.35e-42 166
MS.gene052340.t1 AT4G15233 25.758 594 346 19 47 600 751 1289 2.65e-47 181
MS.gene052340.t1 AT4G15233 24.885 655 398 23 39 637 81 697 3.35e-42 166
MS.gene052340.t1 AT4G15233 25.758 594 346 19 47 600 813 1351 2.71e-47 181
MS.gene052340.t1 AT4G15233 24.885 655 398 23 39 637 143 759 2.83e-42 166
MS.gene052340.t1 AT1G15520 26.040 649 396 18 41 637 159 775 7.05e-47 180
MS.gene052340.t1 AT1G15520 29.613 439 252 13 53 469 852 1255 2.41e-42 166
MS.gene052340.t1 AT5G60740 41.245 257 143 5 33 286 499 750 2.26e-46 178
MS.gene052340.t1 AT4G15233 26.422 545 315 17 47 557 813 1305 1.95e-45 175
MS.gene052340.t1 AT4G15233 24.885 655 398 23 39 637 143 759 1.95e-42 166
MS.gene052340.t1 AT4G15233 25.585 641 401 23 39 641 81 683 2.62e-45 175
MS.gene052340.t1 AT4G15233 25.301 581 351 17 54 600 677 1208 8.53e-45 173
MS.gene052340.t1 AT4G15233 25.585 641 401 23 39 641 81 683 2.62e-45 175
MS.gene052340.t1 AT4G15233 25.301 581 351 17 54 600 677 1208 8.53e-45 173
MS.gene052340.t1 AT1G66950 25.641 585 330 18 47 583 874 1401 5.38e-43 168
MS.gene052340.t1 AT1G66950 26.889 569 355 15 49 572 182 734 6.57e-41 161
MS.gene052340.t1 AT2G36380 25.494 557 342 13 47 574 873 1385 5.73e-43 168
MS.gene052340.t1 AT2G36380 25.483 569 363 16 49 572 180 732 2.65e-38 153
MS.gene052340.t1 AT3G21080 50.340 147 64 3 510 651 105 247 7.99e-37 139
MS.gene052340.t1 AT5G61700 25.118 211 141 5 30 234 592 791 2.71e-16 83.6
MS.gene052340.t1 AT5G61700 25.118 211 141 5 30 234 592 791 2.71e-16 83.6
MS.gene052340.t1 AT5G61700 25.105 239 160 7 30 262 592 817 6.90e-15 79.3
MS.gene052340.t1 AT5G61740 26.596 188 121 5 30 211 445 621 9.37e-14 75.5
MS.gene052340.t1 AT5G61740 26.596 188 121 5 30 211 584 760 1.13e-13 75.1
MS.gene052340.t1 AT5G61740 26.596 188 121 5 30 211 550 726 1.23e-13 75.1
MS.gene052340.t1 AT5G39040 31.019 216 135 8 49 259 409 615 4.38e-13 73.2
MS.gene052340.t1 AT3G47760 23.431 239 164 7 30 262 571 796 8.83e-13 72.4
MS.gene052340.t1 AT1G70610 30.081 246 143 10 53 286 291 519 8.99e-13 71.6
MS.gene052340.t1 AT3G47760 23.431 239 164 7 30 262 611 836 1.22e-12 72.0
MS.gene052340.t1 AT3G47760 23.431 239 164 7 30 262 581 806 1.40e-12 71.6
MS.gene052340.t1 AT3G47740 23.176 233 160 6 36 262 613 832 1.40e-12 71.6
MS.gene052340.t1 AT1G70610 30.081 246 143 10 53 286 472 700 1.69e-12 71.2
MS.gene052340.t1 AT3G47750 22.747 233 161 7 36 262 618 837 2.11e-12 71.2
MS.gene052340.t1 AT4G28620 27.731 238 148 8 29 259 435 655 2.46e-12 70.9
MS.gene052340.t1 AT4G28630 26.829 246 154 10 29 266 433 660 2.59e-12 70.5
MS.gene052340.t1 AT4G18050 31.606 193 108 6 49 230 368 547 2.84e-12 70.9
MS.gene052340.t1 AT3G47780 24.034 233 158 7 36 262 616 835 2.89e-12 70.9
MS.gene052340.t1 AT4G18050 31.606 193 108 6 49 230 378 557 2.92e-12 70.9
MS.gene052340.t1 AT3G47790 20.949 253 185 5 14 262 567 808 3.44e-12 70.5
MS.gene052340.t1 AT2G47000 31.313 198 117 9 49 238 397 583 3.49e-12 70.5
MS.gene052340.t1 AT5G58270 28.319 226 137 8 44 259 485 695 4.04e-12 70.1
MS.gene052340.t1 AT2G47000 31.313 198 117 9 49 238 397 583 4.16e-12 70.1
MS.gene052340.t1 AT2G47000 31.313 198 117 9 49 238 397 583 4.16e-12 70.1
MS.gene052340.t1 AT2G47000 31.313 198 117 9 49 238 397 583 4.79e-12 70.1
MS.gene052340.t1 AT3G47790 21.525 223 162 4 14 232 567 780 4.88e-12 69.7
MS.gene052340.t1 AT3G47790 21.525 223 162 4 14 232 448 661 5.69e-12 69.7
MS.gene052340.t1 AT2G47000 31.313 198 117 9 49 238 397 583 6.52e-12 69.7
MS.gene052340.t1 AT2G47000 31.313 198 117 9 49 238 397 583 6.52e-12 69.7
MS.gene052340.t1 AT2G47000 31.313 198 117 9 49 238 397 583 6.52e-12 69.7
MS.gene052340.t1 AT3G47730 26.020 196 124 7 65 253 558 739 1.53e-11 68.6
MS.gene052340.t1 AT2G36910 32.487 197 116 8 49 238 381 567 2.10e-11 68.2
MS.gene052340.t1 AT4G25960 31.674 221 126 10 49 259 414 619 2.49e-11 67.8
MS.gene052340.t1 AT4G25450 31.064 235 134 12 49 272 483 700 3.04e-11 67.4
MS.gene052340.t1 AT4G25450 31.064 235 134 12 49 272 314 531 3.66e-11 66.6
MS.gene052340.t1 AT3G47770 23.077 221 151 6 48 262 599 806 3.79e-11 67.0
MS.gene052340.t1 AT1G10680 32.178 202 110 10 49 238 374 560 4.82e-11 67.0
MS.gene052340.t1 AT3G47770 22.318 233 162 6 36 262 613 832 5.09e-11 66.6
MS.gene052340.t1 AT1G10680 32.178 202 110 10 49 238 374 560 5.27e-11 66.6
MS.gene052340.t1 AT5G61690 28.283 198 117 8 65 253 559 740 7.70e-11 66.2

Find 132 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCAGATCCTTTCATGAATT+TGG 0.135560 4.4:-33658366 MS.gene052340:CDS
ATGAAAGGATCTGCTGAATT+TGG 0.146252 4.4:+33658374 None:intergenic
ATGATTCCCATGAGAAAATT+TGG 0.154614 4.4:+33656963 None:intergenic
TTGAGAAAAGACCTTCTTTC+AGG 0.175896 4.4:-33655563 MS.gene052340:CDS
TCTTTCATCATTCCCGTTCT+TGG 0.177169 4.4:-33657132 MS.gene052340:CDS
AGAGTTATGTTGCCAAATTT+TGG 0.179448 4.4:-33663114 MS.gene052340:CDS
GTTGGTCCTTTCCCAAAATT+TGG 0.179855 4.4:+33663102 None:intergenic
TCCTCCTTCTCTTATGTTAC+AGG 0.190030 4.4:-33655671 MS.gene052340:CDS
ACATATTCTCCTGTCAGTTT+TGG 0.195140 4.4:+33655756 None:intergenic
AGGTTGCTTAATGGACTAAA+TGG 0.247817 4.4:-33663075 MS.gene052340:CDS
TAAGCCGCTGATTTCTTCTT+TGG 0.253209 4.4:+33659524 None:intergenic
AGTGGCGAAACTGTTTATTT+TGG 0.268980 4.4:-33659201 MS.gene052340:CDS
TGGTAGAATCATGGCTATTA+TGG 0.271739 4.4:-33663040 MS.gene052340:CDS
GGATAGCGCCAAACAGGTTT+TGG 0.292187 4.4:+33656786 None:intergenic
TTTCTCATGGGAATCATTAC+AGG 0.293620 4.4:-33656957 MS.gene052340:CDS
AAGCTGTTGTATGGTTCTTT+TGG 0.296775 4.4:+33655584 None:intergenic
TGATGACCTCTGGATTCTTT+AGG 0.298220 4.4:-33656824 MS.gene052340:CDS
CCAACTAAAAGGTTGCTTAA+TGG 0.302201 4.4:-33663084 MS.gene052340:CDS
AGTCAGAATTGATGCATCTT+AGG 0.307460 4.4:+33658822 None:intergenic
CATATAACATGGTGAAATTC+AGG 0.319419 4.4:-33657079 MS.gene052340:CDS
CCGTAACTGATATATGAAAT+TGG 0.321146 4.4:+33656765 None:intergenic
TTGGGAAAGGACCAACTAAA+AGG 0.333669 4.4:-33663095 MS.gene052340:CDS
TGCCATCTGTTACTACTTCC+AGG 0.334733 4.4:-33655536 MS.gene052340:CDS
TGATGCAACAATCATTGAAA+TGG 0.335549 4.4:-33659499 MS.gene052340:CDS
GAAAGAATGAATGGATATTA+TGG 0.336869 4.4:-33657182 MS.gene052340:CDS
GCCTGTGGTGCATTTATATC+AGG 0.340620 4.4:-33657875 MS.gene052340:CDS
ACTTTGCTTGATACACTTGC+AGG 0.353311 4.4:-33662994 MS.gene052340:intron
TTTATGACTTTCATGTCAAT+TGG 0.367206 4.4:-33657851 MS.gene052340:CDS
GACTGTGCAGATAGGTTAAT+AGG 0.377572 4.4:-33659468 MS.gene052340:CDS
TTCATTTCTTCAATAAAAGA+TGG 0.384010 4.4:+33657821 None:intergenic
CTGATCTTCCAAAACCTGTT+TGG 0.390665 4.4:-33656794 MS.gene052340:CDS
ACAGGAAATGTTCTTCTCAA+TGG 0.391733 4.4:-33659875 MS.gene052340:CDS
CAGATAGGTTAATAGGTAAC+TGG 0.395360 4.4:-33659461 MS.gene052340:CDS
TGATGAACCGACCAGTGGTT+TGG 0.405769 4.4:-33659355 MS.gene052340:CDS
TCTTCTTTGGACATTGTTGA+TGG 0.414148 4.4:+33659537 None:intergenic
ATGGCTATTATGGGTCCTTC+TGG 0.416172 4.4:-33663030 MS.gene052340:CDS
TTCTGACTTTGACGTTGTAA+TGG 0.423696 4.4:-33658807 MS.gene052340:CDS
CCATTCCAAGTGGTGGGACT+TGG 0.425020 4.4:-33655703 MS.gene052340:CDS
TTACGGTGCATGGGCGATAC+AGG 0.428031 4.4:-33656748 MS.gene052340:intron
ATTATGGGTCCTTCTGGCTC+TGG 0.429652 4.4:-33663024 MS.gene052340:CDS
GGTAGAATCATGGCTATTAT+GGG 0.431697 4.4:-33663039 MS.gene052340:CDS
GAAATTGGATAGCGCCAAAC+AGG 0.438877 4.4:+33656780 None:intergenic
CTACGGCTACACTTCCATCT+TGG 0.441109 4.4:-33657906 MS.gene052340:CDS
CAGGAAATGTTCTTCTCAAT+GGG 0.444946 4.4:-33659874 MS.gene052340:CDS
CATATATCAGTTACGGTGCA+TGG 0.450064 4.4:-33656758 MS.gene052340:CDS
CCAATTTCATATATCAGTTA+CGG 0.456412 4.4:-33656765 MS.gene052340:CDS
ATGGGAATCATTACAGGAGC+TGG 0.460308 4.4:-33656951 MS.gene052340:CDS
TTTACGTGGACAAGGGAAAC+CGG 0.461223 4.4:+33658865 None:intergenic
GATGCAACAATCATTGAAAT+GGG 0.469400 4.4:-33659498 MS.gene052340:CDS
GTTGCTTCCACCAACTAGCT+TGG 0.469934 4.4:+33658050 None:intergenic
ACGCAAGAAGATGTGTTGTT+AGG 0.470386 4.4:-33659609 MS.gene052340:CDS
TATGTGATAACACACATGTT+GGG 0.472789 4.4:-33655738 MS.gene052340:CDS
TGCTGAGCCTGGTAGAATCA+TGG 0.476639 4.4:-33663049 MS.gene052340:CDS
GAGCAATAGCAACCAAGAAC+GGG 0.478605 4.4:+33657120 None:intergenic
ACCAACTAGCTTGGCTTCCA+AGG 0.481452 4.4:+33658059 None:intergenic
TCATTCACTGTCTTCTCAAG+AGG 0.483031 4.4:-33655499 MS.gene052340:CDS
ATGACTTTCATGTCAATTGG+AGG 0.485960 4.4:-33657848 MS.gene052340:CDS
CCAAGTCCCACCACTTGGAA+TGG 0.495424 4.4:+33655703 None:intergenic
TTTGGGTTACCTGGGAGTAG+TGG 0.496541 4.4:+33655774 None:intergenic
TGCTGCCAAGTCCCACCACT+TGG 0.499759 4.4:+33655698 None:intergenic
GCATATTGTGGTCTTAATAG+AGG 0.502246 4.4:-33663162 MS.gene052340:CDS
GGAATCATGATGATGACCTC+TGG 0.502637 4.4:-33656834 MS.gene052340:CDS
ATCATTGTATCTATATGTGT+TGG 0.504900 4.4:-33657950 MS.gene052340:CDS
GTGAACATGTGTAGAGATGT+TGG 0.507536 4.4:-33658001 MS.gene052340:CDS
CTTGAGAAGACAGTGAATGA+AGG 0.514359 4.4:+33655502 None:intergenic
ATGAAGGGGTTGATGCCTCC+TGG 0.517928 4.4:+33655518 None:intergenic
ACAGGCACCACGAGCCAAGA+TGG 0.518793 4.4:+33657892 None:intergenic
ACCTTGGAAGCCAAGCTAGT+TGG 0.522711 4.4:-33658060 MS.gene052340:CDS
GTAGAGATGTTGGTTACTAC+TGG 0.523631 4.4:-33657991 MS.gene052340:CDS
CGTTGTAATGGCTACACTGA+AGG 0.524184 4.4:-33658795 MS.gene052340:CDS
TTGGAAGCCAAGCTAGTTGG+TGG 0.528421 4.4:-33658057 MS.gene052340:CDS
CTTGAAACTGAGATAAACCT+TGG 0.528878 4.4:-33658076 MS.gene052340:CDS
CATTCACTGTCTTCTCAAGA+GGG 0.534132 4.4:-33655498 MS.gene052340:CDS
TCCTGATATAAATGCACCAC+AGG 0.540257 4.4:+33657874 None:intergenic
AGAGCAATAGCAACCAAGAA+CGG 0.544729 4.4:+33657119 None:intergenic
ATATGTGATAACACACATGT+TGG 0.546284 4.4:-33655739 MS.gene052340:CDS
ATCTTGGCTCGTGGTGCCTG+TGG 0.547250 4.4:-33657890 MS.gene052340:CDS
AACGCATAGTGAATGAATCC+TGG 0.547925 4.4:+33657056 None:intergenic
TTGAGAAGACAGTGAATGAA+GGG 0.548087 4.4:+33655503 None:intergenic
CTTAGAAATTGTGCTCGTGA+TGG 0.549034 4.4:-33659300 MS.gene052340:CDS
ATATATCAGTTACGGTGCAT+GGG 0.552581 4.4:-33656757 MS.gene052340:CDS
ATAGAGGAAGCTTCTTAGCA+TGG 0.554454 4.4:-33663146 MS.gene052340:CDS
TAGAGGAAGCTTCTTAGCAT+GGG 0.556492 4.4:-33663145 MS.gene052340:CDS
AATTAAGCCATTCCAAGTGG+TGG 0.556493 4.4:-33655710 MS.gene052340:CDS
CTTACAACAAAACCATAGCC+TGG 0.557488 4.4:+33659839 None:intergenic
GAAATTGTGCTCGTGATGGA+AGG 0.559639 4.4:-33659296 MS.gene052340:CDS
CCAGGTAACCCAAAACTGAC+AGG 0.560140 4.4:-33655765 MS.gene052340:CDS
TCATACAAGAATGACTTGCT+TGG 0.561045 4.4:-33655810 MS.gene052340:CDS
TTAACCTATCTGCACAGTCA+TGG 0.561627 4.4:+33659472 None:intergenic
AGCGTTCAACGTATGCCAGA+AGG 0.563888 4.4:-33658304 MS.gene052340:CDS
GTCTCCATGACTGTGCAGAT+AGG 0.568429 4.4:-33659476 MS.gene052340:CDS
GAGTTTGATCCACTACTCCC+AGG 0.569657 4.4:-33655783 MS.gene052340:CDS
GAGGTATAAGTGGTGGCGAA+AGG 0.574362 4.4:-33659431 MS.gene052340:CDS
AACATGGTGAAATTCAGGCC+AGG 0.575455 4.4:-33657074 MS.gene052340:CDS
ATGTGATAACACACATGTTG+GGG 0.583963 4.4:-33655737 MS.gene052340:CDS
TGGCATTTGAGAGGTATAAG+TGG 0.586145 4.4:-33659441 MS.gene052340:CDS
TGCAAGTGTATCAAGCAAAG+TGG 0.586411 4.4:+33662996 None:intergenic
ATGTTGGTTACTACTGGCTG+AGG 0.586749 4.4:-33657985 MS.gene052340:CDS
AACCACTGGTCGGTTCATCA+AGG 0.587210 4.4:+33659358 None:intergenic
CATCTTAGGAAATGATCAGA+AGG 0.591308 4.4:+33658836 None:intergenic
ATTAAGCCATTCCAAGTGGT+GGG 0.591525 4.4:-33655709 MS.gene052340:CDS
TCCTGTAACATAAGAGAAGG+AGG 0.591821 4.4:+33655670 None:intergenic
AGATGCACTGTCCAAACCAC+TGG 0.599382 4.4:+33659344 None:intergenic
GTTGTAATGGCTACACTGAA+GGG 0.600828 4.4:-33658794 MS.gene052340:CDS
GCGTTCAACGTATGCCAGAA+GGG 0.602784 4.4:-33658303 MS.gene052340:CDS
TACACTTCCATCTTGGCTCG+TGG 0.602988 4.4:-33657899 MS.gene052340:CDS
CTCCTGGAAGTAGTAACAGA+TGG 0.608454 4.4:+33655534 None:intergenic
AGTGCAAAGACTTCACTGCT+AGG 0.611217 4.4:+33659249 None:intergenic
ATAGGTAACTGGCATTTGAG+AGG 0.611647 4.4:-33659450 MS.gene052340:CDS
GCTGTAGCCAAATTCATGAA+AGG 0.611893 4.4:+33658359 None:intergenic
TTCCTTGATGAACCGACCAG+TGG 0.613055 4.4:-33659360 MS.gene052340:CDS
ATATCCTGTAACATAAGAGA+AGG 0.613354 4.4:+33655667 None:intergenic
AGTGATGAGGAAGCATATTG+TGG 0.621490 4.4:-33663174 MS.gene052340:CDS
ATAATAGCCATGATTCTACC+AGG 0.623399 4.4:+33663042 None:intergenic
CAACAACAAAGGATGCAACA+TGG 0.635595 4.4:-33663202 MS.gene052340:CDS
CAACATGGACGAGAGTGATG+AGG 0.639956 4.4:-33663187 MS.gene052340:CDS
TTGAATTAAGCCATTCCAAG+TGG 0.642469 4.4:-33655713 MS.gene052340:CDS
TTGAGATTCTCACAAGACCT+CGG 0.643139 4.4:-33659389 MS.gene052340:CDS
CTACACTGAAGGGATCTCAA+AGG 0.649125 4.4:-33658784 MS.gene052340:CDS
TGAAGCTAAAATGGCAATCG+AGG 0.650043 4.4:-33659178 MS.gene052340:intron
ATGGAGATTGAAGCAGCAAG+TGG 0.658880 4.4:-33663228 MS.gene052340:CDS
TGAGAAGACAGTGAATGAAG+GGG 0.663320 4.4:+33655504 None:intergenic
AGCAACTCAAAACACTGACA+AGG 0.665776 4.4:-33658033 MS.gene052340:CDS
CATTTGAGAGGTATAAGTGG+TGG 0.666459 4.4:-33659438 MS.gene052340:CDS
AGTGATTGAGAGTCTCATGA+TGG 0.667256 4.4:-33657003 MS.gene052340:CDS
TTGCACAATCACATATAACA+TGG 0.677547 4.4:-33657090 MS.gene052340:CDS
GCAAGTGGTAGCAACAACAA+AGG 0.683774 4.4:-33663213 MS.gene052340:CDS
GCACTGTCCAAACCACTGGT+CGG 0.688239 4.4:+33659348 None:intergenic
TAGCAACCTAAAGAATCCAG+AGG 0.696592 4.4:+33656818 None:intergenic
ATGTCCAAAGAAGAAATCAG+CGG 0.710305 4.4:-33659528 MS.gene052340:CDS
TCATCAAGGAACAGTAACCG+AGG 0.733960 4.4:+33659372 None:intergenic
CATCTGTTACTACTTCCAGG+AGG 0.782086 4.4:-33655533 MS.gene052340:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr4.4 gene 33655473 33663250 33655473 ID=MS.gene052340
chr4.4 mRNA 33655473 33663250 33655473 ID=MS.gene052340.t1;Parent=MS.gene052340
chr4.4 exon 33662995 33663250 33662995 ID=MS.gene052340.t1.exon1;Parent=MS.gene052340.t1
chr4.4 CDS 33662995 33663250 33662995 ID=cds.MS.gene052340.t1;Parent=MS.gene052340.t1
chr4.4 exon 33659844 33659923 33659844 ID=MS.gene052340.t1.exon2;Parent=MS.gene052340.t1
chr4.4 CDS 33659844 33659923 33659844 ID=cds.MS.gene052340.t1;Parent=MS.gene052340.t1
chr4.4 exon 33659179 33659640 33659179 ID=MS.gene052340.t1.exon3;Parent=MS.gene052340.t1
chr4.4 CDS 33659179 33659640 33659179 ID=cds.MS.gene052340.t1;Parent=MS.gene052340.t1
chr4.4 exon 33658778 33658900 33658778 ID=MS.gene052340.t1.exon4;Parent=MS.gene052340.t1
chr4.4 CDS 33658778 33658900 33658778 ID=cds.MS.gene052340.t1;Parent=MS.gene052340.t1
chr4.4 exon 33658271 33658402 33658271 ID=MS.gene052340.t1.exon5;Parent=MS.gene052340.t1
chr4.4 CDS 33658271 33658402 33658271 ID=cds.MS.gene052340.t1;Parent=MS.gene052340.t1
chr4.4 exon 33657820 33658104 33657820 ID=MS.gene052340.t1.exon6;Parent=MS.gene052340.t1
chr4.4 CDS 33657820 33658104 33657820 ID=cds.MS.gene052340.t1;Parent=MS.gene052340.t1
chr4.4 exon 33656944 33657216 33656944 ID=MS.gene052340.t1.exon7;Parent=MS.gene052340.t1
chr4.4 CDS 33656944 33657216 33656944 ID=cds.MS.gene052340.t1;Parent=MS.gene052340.t1
chr4.4 exon 33656749 33656856 33656749 ID=MS.gene052340.t1.exon8;Parent=MS.gene052340.t1
chr4.4 CDS 33656749 33656856 33656749 ID=cds.MS.gene052340.t1;Parent=MS.gene052340.t1
chr4.4 exon 33655473 33655835 33655473 ID=MS.gene052340.t1.exon9;Parent=MS.gene052340.t1
chr4.4 CDS 33655473 33655835 33655473 ID=cds.MS.gene052340.t1;Parent=MS.gene052340.t1
Gene Sequence

>MS.gene052340

ATGGAGATTGAAGCAGCAAGTGGTAGCAACAACAAAGGATGCAACATGGACGAGAGTGATGAGGAAGCATATTGTGGTCTTAATAGAGGAAGCTTCTTAGCATGGGAAGATCTAAGAGTTATGTTGCCAAATTTTGGGAAAGGACCAACTAAAAGGTTGCTTAATGGACTAAATGGTTTTGCTGAGCCTGGTAGAATCATGGCTATTATGGGTCCTTCTGGCTCTGGAAAATCCACTTTGCTTGATACACTTGCAGGTTCATAACTAGTTACTTCATTCTTATTATGCTGCTATATATATGTTTCTCTGTTTGTGATAGTACTTCTTTTCTTATGCTATGACTTGAATTGCCCAAACATGAGTAAATTCAAGGTTTTTCATAAACCAAAATATCATGTTTTTTGGAAGAAGAAAAAATGTTCAACCTTTTATTACTTTGATGGTTTCTCACTATGGTGGTACACAAATTCTTTTATTCAATTAGGATTATGTATAATTGAGTATACCAAAAATTGGATATTTCCCTTTTGAGGTTTCTTTCTGGGACTGTTTGAAGCTTAATTGGTTAGTTTAGTGTATTGAATTTACTATATTGATTTTTAATTTTTAATTTTATAAAATAACTCTGGTGACACTAACCTAAGGGCCCTGGTTTTAATGGCTTGGTCTGTGGTGGGGTATGATATTGTTATCTAACATTAACAAACATTACAATTATGGACCATCCCGAACCAATTCTGTCAAGTCAAAAATATATTTGCTATTTTGATGATATTTGAATTTATTTTTGTACTTCTAAATAATCACCAAGGAAAAAATTGGGGTTTATTATAAAAAATATATATATACAAATATTTACAAAAATACCTTAGTGACCTTTCCACTATACAGCTACAAATAATGAAGTGGCATTCAAAAATTCAATTATAATTTAACTAGGGCATTATGGGAAGAATAATATTAAGGTAGTTAAAATTGCTTATATTCCCTAAAAATAATTTGCTCATATTAGAGAACACGAAAGGTTAATGTTTTTTTTTCTTTCTTAGGGACATGTTTTTTTGAAGAGGAATCTATATAGGAAGTGCTCCCTCCCTCCATCCTTTAATATAGGAGTATTTTATCAAAATCATGGATATTAAGAAAAGATGTGGAGTAATAAATTTATGTGAAACTATTACTTTTTTTTACTAGTTTTTTTTTTTTGGAATCAACTTTTTTTTTTTACTAAATTGTTCTTTATGTATAAATTCATTTAATGTTGATTTCTATATTATAAGACAATTGGTAGTATTATACTTTCTCCGCCCAAATTATATGACGTTTTGGGTATTTCACATGTATTAAGAAAAATCTAATTAATTTTGTATGAAAATGAGATATTGTGAGTTGTTTTATAAAATTGTCCTTAATAAATGATATAAGAAAGATAAATTAAAAAATTGAAAAAAATAGAGTAATAAATAGTTAAGGATATATAGGAAAAGTAACATTAAAGTTTCATTTGGTATTGTAAAACGGCTTATAATCTATAACAATTTTTTTCCTCAAAGCGACTTATAATTTGAGGACAGAGGAAGTATTAATAAAGGGTATAGTTGGAAAAAAATAATGAATACATTTAAAAATTTATAGATGGTCTTATATTTAACGACAAACATCTTTTTATAAATGATCTTATAATCAAGCACGAGTGAAATATTTATTAAAGAAAAAAATTCTTCAAAATTTTAAAAAAATAATTTATATCTTTGCCATGCTAAGATGTGTATTTCCCTTTTCCTTATCTTATAATAAGGAATAGAGGGGGCATGGAGTATTGATTTTTGTAGAGTTGGGTAACAAAGTGGCGGTCGCAACTGTTTCTGTCTCCAAAATTTATTTCCAAATCTTTGACAGCTGCCATTGAAAAGAACAAGTTAATAGCTCTCTATCTTTATGTTATTAAATTTTGGTGGTTGGAATTGTGAGATTGGAAAATTATATTCAAGCACATAACCTAACTTATGGATTTTGAAAAGGGTAGGTTCAATGAGCATGTGAATCTAGGTGTGTACAATTAATCAAGTACTTTCTAAGAGATTTTTTTTTTAGATTCATTTGATAAAATGATGTATTTAATCCTTAATATAGATTAAATGCATCATTTTTTTATATGAATCTAAAATGTCAATTTTCTTTTATAATAGAGACGGGAGAAAATATATATTCAAAAAATTATTGCGAAGAATTTAATAAACCTATATTTCATTACCTTCATAAGTGTTCTTTTTATCTCAATTCTCAGGTTTTAAAAAGAAATAGATCTTAGTTTAGATTTTAAGGTAAGTAAAGTTTGATTAAACGTTAACTAAGTGATTGGACTTAAGTGTTAATGAGTTTTATCAAATGATGAATTTGTTCGAAAAAACTTGAGTCTTATTTTTAAGTGGAACAATTATTAACCAAATTTTACTTACTTCGCTGTCAAACTCTGGATTACTAAGACATTGTGCCATGAAATTAAATTCTAAATAATTTAATTTAACATATTTGTAATGATTTTTTGGCGTCGGATTTTTTTTTAAGTTTAGTTTATATTTGGAGATATTTTTTTTGAGGCAGTTGATTATTTTTTTCGAATAACTAATTTTTTAGAATAAAGAAATTAATAATATATTGTTTCATAAAAAATAAAAAATAAATAAAAAAACTTATTTTTTCGAATGTACTCCCTCCGGTCACTATTATAAGCTAAAGTTCATTTTTTAGATTCATTCAATAAATGATGTAAGTAGTCTATATACAGACCACATACATCATTTATTAAATGAATCTAAAAAGTCCTTATAATAGTGACTGTAGGTAGTATATATTACAAGTTAGTACTTTTGTTAGTGTATTTAACTTAGTTTAAACACTTTCTTAGTTTAGTCATGTTGCCCAAATTACGGTTTGTAAGTTAAAGCCATGAATTGTGTGTTCCATTTTCACCGTAAGTTGATAATTACCAGATCAATTATCAAATTCCATGAACATTGATTGCCAAAACACACTTTAATGCCCATGGCCCATGCTGGGGACCATGGTTTTTGTCTTCTCATTTGCACTAGTAATGGGATTTGACCTTTTCACCTAATCATCACGTATCATAAATGGTTGAGTGTTGCATAATCTATCTTGCTTATCATCCAGTGTTAGATGAAATTATAATCATATTAGCATCAACATTAATCACAAGATAAAAAAGGAGCAACAAAGTTTAATCAGTACTACAATTATCCATATGCAATTTGCTAATATACATGACTTTTCAGGGCTAATTTAAATGTCTAAATGTTGTTACAGGTAGACTTGCAAAAAATGTTGTAATGACAGGAAATGTTCTTCTCAATGGGAAGAAAAAAACTCCAGGCTATGGTTTTGTTGTAAGTACACTAACACAAACTCTTACTTTTGTAGAGGACTTTCAACTGAAATTTGTGCTTATAATTCGTTTTGAGCATCAATATATTCATTTATGCATCAATAGATTTATTTGTTACACTTACAATTTCGAGAATCAATACTATATTCACTTGTTTAAAAATATATGATTCATAATACTCATTAATTGATGTTGAAACTTCAGGCATACGTAACGCAAGAAGATGTGTTGTTAGGAACTCTTACAGTGAAAGAAACGATAACATATTCAGCACATTTACGTCTTCCATCAACAATGTCCAAAGAAGAAATCAGCGGCTTAGTTGATGCAACAATCATTGAAATGGGTCTCCATGACTGTGCAGATAGGTTAATAGGTAACTGGCATTTGAGAGGTATAAGTGGTGGCGAAAGGAAAAGAACTAGCATTGCACTTGAGATTCTCACAAGACCTCGGTTACTGTTCCTTGATGAACCGACCAGTGGTTTGGACAGTGCATCTGCATTTTTTGTTGTTCAAACTCTTAGAAATTGTGCTCGTGATGGAAGGACTGTTATTTCTTCTATTCATCAGCCTAGCAGTGAAGTCTTTGCACTTTTTGATGATCTTTTCTTGCTCTCTAGTGGCGAAACTGTTTATTTTGGTGAAGCTAAAATGGCAATCGAGGTATAAATACATTTTTGGTGTCTGCAAATATTTATAGATTTAAAAATGTTTCTGCAAAGATTTTATCTTGTCGAAACCCTCACATTTTGAGAAGGACTTGTTTTCTCTTATGTAGAAAGACACTTTAAGTTCAAGACATGTCCTGAGTATCTGAAACATATCAATGTTCGACATTCATACAATATTGACACGTGGATTCACGTTTGTCTGATTCATAAATTTTCTCTTCTTCAACAACTAGTACTCATGTTCTATAAATTTTTCGATTTCTTGTGCAGTTTTTTGCTGAAGCCGGTTTCCCTTGTCCACGTAAAAGAAATCCTTCTGATCATTTCCTAAGATGCATCAATTCTGACTTTGACGTTGTAATGGCTACACTGAAGGGATCTCAAAGGATTCCTGTATGTATTATTTAGTAATTCTAAACATATGCTTTGAGGTGTCAGATGATTAATTATATACTCATCCTACTTAGGATCTTTTGCAAGAGCTGCTTATCTTATGACGTCAACTAACAAATAATTGAAAATAGCTTATGATATGATCATAAATTGTTTTTTTAGCTTACTTTTATGTTATGTTCATAAGCTGTTTTCAGCTTATTTTTAGAAACAAATCTAGCTAGCTTTTTGTCGTAAGTTGTTTTCAGCTTATGAAGAGTTTATCCTCATTTGTTCAACAATTTCAGAAACAACTTATACCTTAGGTCTTACACGATATTGAACAAACACCTATTGACATGGATTTGTTTGTTTCACTTTTTTCCCCCTTATTAGGATGTTCCAAATTCAGCAGATCCTTTCATGAATTTGGCTACAGCACAAATTAAGTCGATGCTAGTTGAGAGATTTAAGCGTTCAACGTATGCCAGAAGGGTAAAAGACAAGATTCAAGAACAATCAACCAATGTAAGCATTTATATTTAGCTATACTCCTCATTACATATAATTCAACTGATATCTATGCCAAGCCGAAATCCTTAGGATAATCTTTTTCTGTCAGTATAGTAGCCGGTGTCCGTGTCCTTGTCGGTCCTTCATAATATTGATTTTGTTAATGATAAATGTACTACAGGAAGGGCTTGAAACTGAGATAAACCTTGGAAGCCAAGCTAGTTGGTGGAAGCAACTCAAAACACTGACAAGGAGATCATTTGTGAACATGTGTAGAGATGTTGGTTACTACTGGCTGAGGATTATGATCTATATCATTGTATCTATATGTGTTGGAACTATCTATTTTGATATTGGCTACGGCTACACTTCCATCTTGGCTCGTGGTGCCTGTGGTGCATTTATATCAGGATTTATGACTTTCATGTCAATTGGAGGCTTTCCATCTTTTATTGAAGAAATGAAGGTAAAAAAAAAATTGATTCAAGAAATGAAACTAATTATTGAAGTCAGTAATATGAGTTTATAAACGGATAGTTTTCATCAATACTTTGGAAGTGTATGGAAGAACTTGTTTGAGTCTCTCTGGATTAGCTTATTGTAGTTTATCTACCAGTATAAATACTTGTGAGATTGTTTGGTAATGCTTATAGAAACAACGTATGACATGTTAGATGTTTTCATCTTATTTCCATAAAATCTCTAGGATAGCGTATGGTTTATATGAAAACAACTTGATGTTATTGTCTTTTGTTATAGAAATAGCTTATACATTATATGATAAGCGTTTATGCTATAAGCATTGTAAATCCGAACAAATCCGATGCCATAAGCACTAGTATAAGTCTTTGGAAGATCCTTTGAAAATAGCTTATGTTAAGTCTAAAAATTATTTTCAGTTCATTTTCATAAGCTCTTTCAGATAGCTCAGTGTCATAAGTTTTAGCATATGCAGAGTTTACCTTCATTTCAACTTTGATTGTAGAACCAACTTATACATAAGTTCCTGTAAGATATGTGTTTATTCAATAAGCCGCTTATGATGTTTTTGTTGATATATCTGAAACAGGTATTTTATAGAGAAAGAATGAATGGATATTATGGCGTAGCAGCATTTATTTTATCAAACTTTCTTTCATCATTCCCGTTCTTGGTTGCTATTGCTCTTACTTCTTGCACAATCACATATAACATGGTGAAATTCAGGCCAGGATTCATTCACTATGCGTTTTTCACTGTTAACATCTATGGATGCATCTCAGTGATTGAGAGTCTCATGATGGTTGTAGCTGCACTTGTTCCAAATTTTCTCATGGGAATCATTACAGGAGCTGGAATCATTGTAAGAAAAAATGGCGAAAATTCTACTTGAAACCAACTACATGATCCACATGCGTTAATTTTTCATATATTGTTGTTGTTCATGCAGGGAATCATGATGATGACCTCTGGATTCTTTAGGTTGCTATCTGATCTTCCAAAACCTGTTTGGCGCTATCCAATTTCATATATCAGTTACGGTGCATGGGCGATACAGGTAATTCTCGTTGATACCAAGTGTCGGTTTGGTTTTGTGGTTGACAAAATTGATTTTGACTAAACTGATTATGGCTAAAAATGAGTTGAATGTAAAGTGTATTATATTTGGATATGTTTATGTAAAGTCTGTTGAACAATAAATTTGAGGCTAAAAATCAATTGTAGACAGAATAAGTAAGAATCAATTATGGATGCAAAATCAGTTCTACATGAGAACATCCAAACATGTCAATACCAATTCTATACCTGTAAAATCAATTTTTCTTCCTCCAAGAGTCGAACTAAACATACACTAATTGATTCCGGAAGAACTGAATTTGTTAGGAAGTTGACAATTTTGACAGAGTACCCTAGTAACAAGTCCATACTTGAGACTAAAGTAACATAAATGACATCTTTTAAGGATCCAATTGCACATTTATTTTATCTTCATTGATGACAAACATAACAGCATAATACGTTTCTAGACGTGAATTTGAAGATTTATGCTCTATGTATAATAGCACGGACAATTTAGATTGAAAGCGCGCTAGATACTGAGACATGTAATTACATCCAATCACTTCCATCTTTATTGATGACAAACATAAGAGCATAATATGTTCCTAGAAGTCGATTTGGAGATTTATGCTCTATGTATAGTAGCACCAATTATTTAAATTGAAAACACGTTAGATACTGACACGTGTAGTTACATCTAATCACTTCCATCTTTATTGATGACAAATATAAGAGCCTAATATCTTTTTAGAAGTCAACTTGAAGATTTATGCTCTATGTATAGTAGCACAACACTTGAGATTGAAAGTGCGTAAGATACAGACGCGATACCAACATCAGTGCTTATGTGTCAGTGTCGTGTCCGGTGTTAGTGTCCATCTCAATGCTAATTAATATGAATTTGGATGCAGGGTTCATACAAGAATGACTTGCTTGGTCTTGAGTTTGATCCACTACTCCCAGGTAACCCAAAACTGACAGGAGAATATGTGATAACACACATGTTGGGGATTGAATTAAGCCATTCCAAGTGGTGGGACTTGGCAGCACTTTTCCTCCTTCTCTTATGTTACAGGATATTGTTTTTTGTTGTTCTCAAGTTCAAGGAAAGAGCATCACCATTATATAGAAAACTTACTGCCAAAAGAACCATACAACAGCTTGAGAAAAGACCTTCTTTCAGGAAAATGCCATCTGTTACTACTTCCAGGAGGCATCAACCCCTTCATTCACTGTCTTCTCAAGAGGGTCTTGATTCTCCACTCCACACCTAG

Protein sequence

>MS.gene052340.t1

MEIEAASGSNNKGCNMDESDEEAYCGLNRGSFLAWEDLRVMLPNFGKGPTKRLLNGLNGFAEPGRIMAIMGPSGSGKSTLLDTLAGRLAKNVVMTGNVLLNGKKKTPGYGFVAYVTQEDVLLGTLTVKETITYSAHLRLPSTMSKEEISGLVDATIIEMGLHDCADRLIGNWHLRGISGGERKRTSIALEILTRPRLLFLDEPTSGLDSASAFFVVQTLRNCARDGRTVISSIHQPSSEVFALFDDLFLLSSGETVYFGEAKMAIEFFAEAGFPCPRKRNPSDHFLRCINSDFDVVMATLKGSQRIPDVPNSADPFMNLATAQIKSMLVERFKRSTYARRVKDKIQEQSTNEGLETEINLGSQASWWKQLKTLTRRSFVNMCRDVGYYWLRIMIYIIVSICVGTIYFDIGYGYTSILARGACGAFISGFMTFMSIGGFPSFIEEMKVFYRERMNGYYGVAAFILSNFLSSFPFLVAIALTSCTITYNMVKFRPGFIHYAFFTVNIYGCISVIESLMMVVAALVPNFLMGIITGAGIIGIMMMTSGFFRLLSDLPKPVWRYPISYISYGAWAIQGSYKNDLLGLEFDPLLPGNPKLTGEYVITHMLGIELSHSKWWDLAALFLLLLCYRILFFVVLKFKERASPLYRKLTAKRTIQQLEKRPSFRKMPSVTTSRRHQPLHSLSSQEGLDSPLHT