Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene24440.t1 | XP_003589133.1 | 97.9 | 469 | 10 | 0 | 1 | 469 | 6 | 474 | 1.10E-239 | 839 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene24440.t1 | P43297 | 68.9 | 460 | 133 | 4 | 8 | 464 | 8 | 460 | 4.2e-163 | 575.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene24440.t1 | Q2HTQ3 | 97.9 | 469 | 10 | 0 | 1 | 469 | 6 | 474 | 8.0e-240 | 839.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene24440 | MS.gene69606 | PPI |
MS.gene24440 | MS.gene69449 | PPI |
MS.gene24440 | MS.gene96250 | PPI |
MS.gene064708 | MS.gene24440 | PPI |
MS.gene05839 | MS.gene24440 | PPI |
MS.gene42423 | MS.gene24440 | PPI |
MS.gene004403 | MS.gene24440 | PPI |
MS.gene24440 | MS.gene42300 | PPI |
MS.gene24440 | MS.gene014473 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene24440.t1 | MTR_1g018840 | 97.868 | 469 | 10 | 0 | 1 | 469 | 6 | 474 | 0.0 | 961 |
MS.gene24440.t1 | MTR_1g018840 | 97.717 | 438 | 10 | 0 | 1 | 438 | 6 | 443 | 0.0 | 895 |
MS.gene24440.t1 | MTR_3g102220 | 72.043 | 465 | 127 | 2 | 7 | 469 | 11 | 474 | 0.0 | 688 |
MS.gene24440.t1 | MTR_1g107550 | 68.203 | 434 | 131 | 3 | 22 | 454 | 26 | 453 | 0.0 | 600 |
MS.gene24440.t1 | MTR_4g094918 | 64.543 | 361 | 114 | 1 | 3 | 363 | 2 | 348 | 3.58e-177 | 501 |
MS.gene24440.t1 | MTR_3g112430 | 51.020 | 392 | 181 | 6 | 49 | 438 | 35 | 417 | 1.46e-131 | 388 |
MS.gene24440.t1 | MTR_3g116080 | 52.632 | 342 | 150 | 4 | 16 | 357 | 19 | 348 | 1.98e-127 | 374 |
MS.gene24440.t1 | MTR_3g075390 | 51.397 | 358 | 162 | 8 | 11 | 365 | 6 | 354 | 6.08e-123 | 363 |
MS.gene24440.t1 | MTR_4g104370 | 49.862 | 363 | 172 | 7 | 13 | 373 | 6 | 360 | 3.27e-118 | 350 |
MS.gene24440.t1 | MTR_2g016180 | 44.787 | 422 | 208 | 8 | 42 | 448 | 43 | 454 | 2.01e-117 | 353 |
MS.gene24440.t1 | MTR_2g016270 | 44.286 | 420 | 198 | 8 | 42 | 448 | 43 | 439 | 6.01e-115 | 346 |
MS.gene24440.t1 | MTR_4g079470 | 51.368 | 329 | 137 | 7 | 37 | 355 | 28 | 343 | 1.37e-112 | 336 |
MS.gene24440.t1 | MTR_4g079770 | 53.035 | 313 | 130 | 7 | 50 | 355 | 41 | 343 | 3.00e-112 | 335 |
MS.gene24440.t1 | MTR_5g022560 | 48.864 | 352 | 151 | 8 | 16 | 355 | 8 | 342 | 4.92e-111 | 332 |
MS.gene24440.t1 | MTR_4g047610 | 50.462 | 325 | 145 | 6 | 38 | 355 | 26 | 341 | 7.93e-111 | 331 |
MS.gene24440.t1 | MTR_4g079800 | 52.532 | 316 | 127 | 7 | 50 | 355 | 41 | 343 | 9.65e-111 | 331 |
MS.gene24440.t1 | MTR_2g075830 | 49.271 | 343 | 152 | 7 | 19 | 355 | 13 | 339 | 1.49e-110 | 330 |
MS.gene24440.t1 | MTR_4g080730 | 52.597 | 308 | 135 | 6 | 50 | 355 | 40 | 338 | 3.08e-108 | 324 |
MS.gene24440.t1 | MTR_4g080700 | 51.948 | 308 | 137 | 6 | 50 | 355 | 40 | 338 | 7.30e-107 | 321 |
MS.gene24440.t1 | MTR_4g107930 | 50.467 | 321 | 140 | 8 | 45 | 355 | 32 | 343 | 2.96e-106 | 320 |
MS.gene24440.t1 | MTR_4g079440 | 45.559 | 349 | 179 | 6 | 10 | 356 | 5 | 344 | 5.20e-106 | 319 |
MS.gene24440.t1 | MTR_2g090890 | 46.307 | 352 | 166 | 7 | 14 | 358 | 3 | 338 | 6.10e-106 | 318 |
MS.gene24440.t1 | MTR_4g080360 | 47.664 | 321 | 161 | 6 | 39 | 356 | 25 | 341 | 3.71e-100 | 304 |
MS.gene24440.t1 | MTR_2g083930 | 45.342 | 322 | 172 | 4 | 38 | 356 | 23 | 343 | 3.06e-98 | 299 |
MS.gene24440.t1 | MTR_7g078600 | 46.326 | 313 | 149 | 10 | 50 | 358 | 42 | 339 | 4.86e-86 | 268 |
MS.gene24440.t1 | MTR_7g079230 | 43.077 | 325 | 166 | 8 | 37 | 355 | 23 | 334 | 3.04e-85 | 265 |
MS.gene24440.t1 | MTR_2g015850 | 47.797 | 295 | 145 | 7 | 64 | 356 | 76 | 363 | 1.43e-80 | 254 |
MS.gene24440.t1 | MTR_4g065077 | 40.599 | 367 | 184 | 14 | 5 | 357 | 11 | 357 | 5.93e-75 | 239 |
MS.gene24440.t1 | MTR_2g015920 | 37.057 | 367 | 209 | 12 | 9 | 362 | 8 | 365 | 2.10e-70 | 228 |
MS.gene24440.t1 | MTR_2g015930 | 38.950 | 362 | 195 | 13 | 11 | 357 | 9 | 359 | 3.97e-69 | 224 |
MS.gene24440.t1 | MTR_4g125300 | 38.227 | 361 | 190 | 12 | 11 | 356 | 6 | 348 | 1.03e-66 | 218 |
MS.gene24440.t1 | MTR_2g067900 | 43.849 | 317 | 162 | 12 | 50 | 356 | 16 | 326 | 4.06e-66 | 216 |
MS.gene24440.t1 | MTR_8g086470 | 37.466 | 363 | 185 | 13 | 5 | 357 | 27 | 357 | 4.43e-65 | 214 |
MS.gene24440.t1 | MTR_4g071060 | 38.983 | 354 | 168 | 12 | 13 | 336 | 6 | 341 | 2.25e-63 | 209 |
MS.gene24440.t1 | MTR_1g023210 | 41.611 | 298 | 148 | 8 | 56 | 336 | 57 | 345 | 3.52e-63 | 209 |
MS.gene24440.t1 | MTR_2g067560 | 39.255 | 349 | 186 | 15 | 48 | 380 | 14 | 352 | 9.25e-55 | 196 |
MS.gene24440.t1 | MTR_2g064475 | 37.101 | 345 | 169 | 14 | 48 | 354 | 14 | 348 | 1.52e-54 | 186 |
MS.gene24440.t1 | MTR_1g094135 | 33.962 | 371 | 201 | 10 | 4 | 348 | 6 | 358 | 2.48e-54 | 186 |
MS.gene24440.t1 | MTR_1g023810 | 45.249 | 221 | 111 | 7 | 138 | 354 | 47 | 261 | 4.46e-52 | 177 |
MS.gene24440.t1 | MTR_2g066980 | 32.861 | 353 | 183 | 12 | 19 | 355 | 3 | 317 | 8.36e-50 | 172 |
MS.gene24440.t1 | MTR_7g078630 | 37.162 | 296 | 134 | 8 | 28 | 311 | 690 | 945 | 1.05e-47 | 176 |
MS.gene24440.t1 | MTR_4g072790 | 35.714 | 294 | 146 | 8 | 50 | 336 | 48 | 305 | 5.55e-46 | 162 |
MS.gene24440.t1 | MTR_2g016380 | 40.553 | 217 | 117 | 4 | 240 | 446 | 18 | 232 | 2.55e-45 | 159 |
MS.gene24440.t1 | MTR_4g072340 | 32.551 | 341 | 179 | 10 | 7 | 336 | 9 | 309 | 4.51e-44 | 157 |
MS.gene24440.t1 | MTR_4g073660 | 34.459 | 296 | 151 | 7 | 50 | 336 | 47 | 308 | 1.06e-43 | 157 |
MS.gene24440.t1 | MTR_1g025450 | 43.103 | 174 | 77 | 5 | 138 | 308 | 53 | 207 | 1.12e-32 | 130 |
MS.gene24440.t1 | MTR_7g078580 | 50.476 | 105 | 49 | 3 | 258 | 361 | 4 | 106 | 5.96e-29 | 110 |
MS.gene24440.t1 | MTR_2g015840 | 39.259 | 135 | 78 | 2 | 42 | 175 | 25 | 156 | 1.51e-27 | 111 |
MS.gene24440.t1 | MTR_2g015840 | 44.954 | 109 | 57 | 3 | 248 | 355 | 164 | 270 | 1.31e-24 | 103 |
MS.gene24440.t1 | MTR_7g079130 | 50.538 | 93 | 44 | 2 | 265 | 356 | 6 | 97 | 1.07e-24 | 98.2 |
MS.gene24440.t1 | MTR_3g029560 | 33.962 | 212 | 111 | 8 | 151 | 356 | 49 | 237 | 2.47e-21 | 93.2 |
MS.gene24440.t1 | MTR_7g078310 | 47.917 | 96 | 47 | 2 | 140 | 232 | 152 | 247 | 1.21e-20 | 91.7 |
MS.gene24440.t1 | MTR_7g111060 | 28.114 | 281 | 157 | 13 | 97 | 348 | 66 | 330 | 1.95e-19 | 90.1 |
MS.gene24440.t1 | MTR_2g047960 | 48.101 | 79 | 41 | 0 | 149 | 227 | 7 | 85 | 1.84e-18 | 80.9 |
MS.gene24440.t1 | MTR_7g111050 | 27.046 | 281 | 160 | 12 | 97 | 348 | 63 | 327 | 5.80e-17 | 82.4 |
MS.gene24440.t1 | MTR_8g087510 | 33.588 | 131 | 79 | 7 | 181 | 308 | 23 | 148 | 4.40e-12 | 65.1 |
MS.gene24440.t1 | MTR_7g079260 | 42.466 | 73 | 24 | 2 | 282 | 353 | 7 | 62 | 7.29e-11 | 59.7 |
MS.gene24440.t1 | MTR_1g009480 | 27.451 | 102 | 66 | 1 | 5 | 106 | 1 | 94 | 7.88e-11 | 60.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene24440.t1 | AT1G47128 | 71.739 | 460 | 120 | 4 | 8 | 464 | 8 | 460 | 0.0 | 657 |
MS.gene24440.t1 | AT5G43060 | 71.429 | 455 | 119 | 5 | 9 | 459 | 9 | 456 | 0.0 | 639 |
MS.gene24440.t1 | AT3G19390 | 59.465 | 449 | 161 | 8 | 9 | 454 | 8 | 438 | 0.0 | 528 |
MS.gene24440.t1 | AT4G36880 | 61.890 | 328 | 119 | 2 | 41 | 362 | 40 | 367 | 5.81e-150 | 432 |
MS.gene24440.t1 | AT1G09850 | 52.184 | 412 | 174 | 6 | 44 | 449 | 26 | 420 | 1.24e-145 | 423 |
MS.gene24440.t1 | AT3G19400 | 59.133 | 323 | 122 | 6 | 40 | 358 | 34 | 350 | 9.23e-136 | 395 |
MS.gene24440.t1 | AT4G23520 | 55.307 | 358 | 141 | 9 | 5 | 358 | 9 | 351 | 1.05e-135 | 395 |
MS.gene24440.t1 | AT4G11310 | 51.524 | 361 | 165 | 6 | 1 | 358 | 1 | 354 | 5.38e-127 | 373 |
MS.gene24440.t1 | AT4G11320 | 51.801 | 361 | 164 | 6 | 3 | 358 | 6 | 361 | 1.02e-125 | 370 |
MS.gene24440.t1 | AT4G11320 | 51.801 | 361 | 164 | 6 | 3 | 358 | 6 | 361 | 1.02e-125 | 370 |
MS.gene24440.t1 | AT3G48340 | 52.113 | 355 | 163 | 5 | 12 | 365 | 4 | 352 | 3.64e-125 | 369 |
MS.gene24440.t1 | AT1G20850 | 53.731 | 335 | 145 | 4 | 23 | 357 | 30 | 354 | 1.82e-122 | 361 |
MS.gene24440.t1 | AT4G35350 | 50.712 | 351 | 162 | 4 | 7 | 357 | 14 | 353 | 3.45e-121 | 358 |
MS.gene24440.t1 | AT5G50260 | 55.346 | 318 | 136 | 5 | 49 | 364 | 37 | 350 | 1.60e-118 | 352 |
MS.gene24440.t1 | AT1G06260 | 47.714 | 350 | 164 | 6 | 11 | 357 | 10 | 343 | 4.21e-109 | 327 |
MS.gene24440.t1 | AT3G48350 | 47.922 | 361 | 173 | 7 | 5 | 362 | 1 | 349 | 1.73e-108 | 326 |
MS.gene24440.t1 | AT5G45890 | 45.042 | 353 | 173 | 6 | 7 | 355 | 9 | 344 | 1.42e-104 | 315 |
MS.gene24440.t1 | AT3G43960 | 51.032 | 339 | 151 | 10 | 37 | 368 | 28 | 358 | 1.40e-102 | 311 |
MS.gene24440.t1 | AT3G19400 | 58.566 | 251 | 95 | 5 | 40 | 286 | 34 | 279 | 5.27e-100 | 301 |
MS.gene24440.t1 | AT2G34080 | 42.033 | 364 | 183 | 8 | 1 | 356 | 1 | 344 | 3.23e-91 | 281 |
MS.gene24440.t1 | AT2G27420 | 42.936 | 361 | 183 | 10 | 5 | 356 | 1 | 347 | 7.64e-91 | 280 |
MS.gene24440.t1 | AT3G49340 | 46.815 | 314 | 152 | 9 | 50 | 356 | 35 | 340 | 3.30e-90 | 278 |
MS.gene24440.t1 | AT4G35350 | 48.239 | 284 | 136 | 4 | 7 | 290 | 14 | 286 | 7.27e-89 | 273 |
MS.gene24440.t1 | AT1G29080 | 41.905 | 315 | 175 | 7 | 46 | 356 | 35 | 345 | 1.06e-81 | 256 |
MS.gene24440.t1 | AT1G29090 | 40.000 | 365 | 179 | 11 | 9 | 356 | 13 | 354 | 1.67e-80 | 254 |
MS.gene24440.t1 | AT3G48350 | 44.097 | 288 | 148 | 5 | 5 | 290 | 1 | 277 | 9.58e-74 | 234 |
MS.gene24440.t1 | AT1G29110 | 35.673 | 342 | 202 | 6 | 19 | 356 | 6 | 333 | 7.94e-70 | 225 |
MS.gene24440.t1 | AT5G60360 | 38.286 | 350 | 179 | 12 | 27 | 356 | 24 | 356 | 7.41e-66 | 216 |
MS.gene24440.t1 | AT3G45310 | 36.533 | 375 | 200 | 12 | 1 | 356 | 1 | 356 | 5.13e-65 | 214 |
MS.gene24440.t1 | AT4G39090 | 39.806 | 309 | 159 | 7 | 42 | 334 | 46 | 343 | 8.02e-64 | 211 |
MS.gene24440.t1 | AT5G60360 | 37.714 | 350 | 180 | 12 | 27 | 356 | 24 | 355 | 1.73e-63 | 210 |
MS.gene24440.t1 | AT5G60360 | 37.971 | 345 | 183 | 12 | 27 | 352 | 24 | 356 | 4.77e-63 | 209 |
MS.gene24440.t1 | AT3G45310 | 36.074 | 377 | 198 | 13 | 1 | 356 | 1 | 355 | 1.57e-62 | 207 |
MS.gene24440.t1 | AT2G21430 | 36.212 | 359 | 185 | 10 | 1 | 334 | 1 | 340 | 1.93e-62 | 207 |
MS.gene24440.t1 | AT4G16190 | 35.574 | 357 | 195 | 11 | 6 | 336 | 3 | 350 | 2.91e-57 | 194 |
MS.gene24440.t1 | AT3G54940 | 33.333 | 357 | 195 | 10 | 6 | 336 | 8 | 347 | 3.61e-52 | 180 |
MS.gene24440.t1 | AT3G54940 | 32.394 | 284 | 160 | 7 | 6 | 272 | 8 | 276 | 1.12e-39 | 144 |
MS.gene24440.t1 | AT4G01610 | 27.148 | 291 | 173 | 12 | 97 | 361 | 66 | 343 | 1.12e-19 | 90.9 |
MS.gene24440.t1 | AT1G02305 | 28.058 | 278 | 161 | 12 | 97 | 348 | 69 | 333 | 1.63e-19 | 90.1 |
MS.gene24440.t1 | AT4G01610 | 26.460 | 291 | 175 | 12 | 97 | 361 | 66 | 343 | 6.71e-18 | 85.5 |
MS.gene24440.t1 | AT1G02300 | 28.095 | 210 | 122 | 8 | 161 | 348 | 148 | 350 | 4.78e-13 | 70.9 |
Find 127 sgRNAs with CRISPR-Local
Find 289 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAACCGTAGGATGAAGAAAT+TGG | 0.244550 | 1.1:+4099556 | MS.gene24440:CDS |
TATGTTCATCAATGAATTTA+AGG | 0.255434 | 1.1:-4099436 | None:intergenic |
GGTGGTGATGGTCCAGGGTT+AGG | 0.264790 | 1.1:-4102605 | None:intergenic |
CAGAAAACGGGAAAGATTAT+TGG | 0.266107 | 1.1:+4102444 | MS.gene24440:CDS |
GGGTTCTGTCCATTCTTAAT+TGG | 0.270191 | 1.1:-4102581 | None:intergenic |
TTCCTCCAATCAACAGATTC+AGG | 0.289567 | 1.1:-4099626 | None:intergenic |
GCCAAGCCTCACTGGGCCTT+TGG | 0.294833 | 1.1:+4103775 | MS.gene24440:CDS |
TGTTGCTGTATTTACGAGTA+TGG | 0.314590 | 1.1:+4102689 | MS.gene24440:CDS |
AACTTACATATTCATATAAC+TGG | 0.326706 | 1.1:-4101743 | None:intergenic |
AGGATGCAATGGTGGACTTA+TGG | 0.331252 | 1.1:+4101364 | MS.gene24440:CDS |
TGAATTCGACATATAGATTA+GGG | 0.336748 | 1.1:+4099465 | MS.gene24440:CDS |
GTGGTGATGGTCCAGGGTTA+GGG | 0.341154 | 1.1:-4102604 | None:intergenic |
GGAAAATCCTACAACGGTTT+AGG | 0.345309 | 1.1:+4099377 | MS.gene24440:CDS |
ATGGTAGATGTGACCAGAAC+AGG | 0.354867 | 1.1:+4101459 | MS.gene24440:CDS |
GAAATTCATGGGGTGGTAGC+TGG | 0.356281 | 1.1:+4102474 | MS.gene24440:CDS |
TTGAATTCGACATATAGATT+AGG | 0.369544 | 1.1:+4099464 | MS.gene24440:CDS |
CAGACAGATGGTGGCTTGAT+AGG | 0.385214 | 1.1:-4102632 | None:intergenic |
GCACTCCTGCCAAGCCTCAC+TGG | 0.389486 | 1.1:+4103767 | MS.gene24440:CDS |
TGTTCCTGCTTATGATGAAT+TGG | 0.389594 | 1.1:+4101656 | MS.gene24440:CDS |
TCTTGTCAGGGTGTATTTAC+CGG | 0.390275 | 1.1:+4102371 | MS.gene24440:intron |
TGAAGAAATTGGGTGGTTCT+AGG | 0.394114 | 1.1:+4099567 | MS.gene24440:CDS |
CCTATCGCCGTTGCTGTTGA+AGG | 0.401421 | 1.1:+4101705 | MS.gene24440:CDS |
CGTTGGTTAGATCCGCGAAC+CGG | 0.404470 | 1.1:-4099493 | None:intergenic |
ATTGGATTGTGAGAAATTCA+TGG | 0.410060 | 1.1:+4102462 | MS.gene24440:CDS |
CCAAGTAACTAACCCTGTTC+TGG | 0.415431 | 1.1:-4101472 | None:intergenic |
TACCCTTACAAGGCTATTGA+TGG | 0.421160 | 1.1:+4101440 | MS.gene24440:CDS |
CTACCATCAATAGCCTTGTA+AGG | 0.422671 | 1.1:-4101443 | None:intergenic |
AATTGCCTGAATCTGTTGAT+TGG | 0.426885 | 1.1:+4099621 | MS.gene24440:CDS |
AAGGCCCAGTGAGGCTTGGC+AGG | 0.429824 | 1.1:-4103772 | None:intergenic |
CACTCCTGCCAAGCCTCACT+GGG | 0.436398 | 1.1:+4103768 | MS.gene24440:CDS |
CCATTCTTAATTGGATAAGA+TGG | 0.437304 | 1.1:-4102572 | None:intergenic |
AAATTCATGGGGTGGTAGCT+GGG | 0.440858 | 1.1:+4102475 | MS.gene24440:CDS |
TCAGCAATCGCAGCTGTTGA+AGG | 0.443055 | 1.1:+4101263 | MS.gene24440:CDS |
TTTCAATGAAGGGAGTTGTT+GGG | 0.446061 | 1.1:+4101235 | MS.gene24440:intron |
GGTGATGGTCCAGGGTTAGG+GGG | 0.448618 | 1.1:-4102602 | None:intergenic |
TGGTGATGGTCCAGGGTTAG+GGG | 0.449337 | 1.1:-4102603 | None:intergenic |
AAGCCTCACTGGGCCTTTGG+TGG | 0.453398 | 1.1:+4103778 | MS.gene24440:CDS |
GTGATGGTCCAGGGTTAGGG+GGG | 0.453507 | 1.1:-4102601 | None:intergenic |
AGGAAGGAAGGCGCTGTTGT+TGG | 0.455471 | 1.1:+4099644 | MS.gene24440:CDS |
CATAGTCAACACTTCTTCGT+TGG | 0.459007 | 1.1:-4099330 | None:intergenic |
TCGTGCTGGACTTTGTCTTA+AGG | 0.462543 | 1.1:+4102811 | MS.gene24440:CDS |
GTTGGATACGGTACAGAAAA+CGG | 0.466958 | 1.1:+4102431 | MS.gene24440:CDS |
TTCACTATCAGAACAAGAAC+TGG | 0.467996 | 1.1:+4101316 | MS.gene24440:CDS |
AATTTCTTCATCCTACGGTT+CGG | 0.472057 | 1.1:-4099554 | None:intergenic |
GGTGAAGGTGGTGATGGTCC+AGG | 0.475487 | 1.1:-4102611 | None:intergenic |
TGATGAATTGGCCTTGCAAA+AGG | 0.476220 | 1.1:+4101668 | MS.gene24440:CDS |
CTTGCTTCTATACTCTTCGT+TGG | 0.478320 | 1.1:-4099510 | None:intergenic |
GGAATAAATAAGATTGTGAC+AGG | 0.481755 | 1.1:+4101284 | MS.gene24440:CDS |
AGGAGATGATCGACATGTCT+AGG | 0.481788 | 1.1:-4099268 | None:intergenic |
CACCCAATTTCTTCATCCTA+CGG | 0.483167 | 1.1:-4099559 | None:intergenic |
TTGAATGACTTCACTCCCAA+TGG | 0.485328 | 1.1:-4103742 | None:intergenic |
AGTGCTTACCACAACTTGCT+TGG | 0.487527 | 1.1:-4099676 | None:intergenic |
GCTTGTTGATTTGTCTGGGT+GGG | 0.490913 | 1.1:-4099300 | None:intergenic |
CAACAGCAACGGCGATAGGC+TGG | 0.494154 | 1.1:-4101701 | None:intergenic |
ATTAGGGTTGACCCGGTTCG+CGG | 0.494343 | 1.1:+4099481 | MS.gene24440:CDS |
CCTTCAACAGCAACGGCGAT+AGG | 0.495351 | 1.1:-4101705 | None:intergenic |
ACCAAAGGCCCAGTGAGGCT+TGG | 0.495376 | 1.1:-4103776 | None:intergenic |
AACCGTAGGATGAAGAAATT+GGG | 0.496972 | 1.1:+4099557 | MS.gene24440:CDS |
TTGGATACGGTACAGAAAAC+GGG | 0.498134 | 1.1:+4102432 | MS.gene24440:CDS |
CCTGTCTGTGACACTCGTGC+TGG | 0.506173 | 1.1:+4102797 | MS.gene24440:CDS |
TGGAAGATCTTGCTTTGAGT+GGG | 0.510888 | 1.1:+4102709 | MS.gene24440:CDS |
CCATCTTATCCAATTAAGAA+TGG | 0.514473 | 1.1:+4102572 | MS.gene24440:CDS |
CAGGGCAAGAACAACCCATT+GGG | 0.518625 | 1.1:+4103727 | MS.gene24440:intron |
TGAATGACTTCACTCCCAAT+GGG | 0.526000 | 1.1:-4103741 | None:intergenic |
TGCTTGTTGATTTGTCTGGG+TGG | 0.529438 | 1.1:-4099301 | None:intergenic |
AAATTCATTGATGAACATAA+CGG | 0.530458 | 1.1:+4099440 | MS.gene24440:CDS |
TCAAGCAGAGCAGGAAAGTG+TGG | 0.532736 | 1.1:+4102536 | MS.gene24440:CDS |
GGCTAGTGAAACTGTGAAAG+TGG | 0.534429 | 1.1:-4099246 | None:intergenic |
AGCTACTACAGCTGTGCTGA+AGG | 0.535391 | 1.1:+4102659 | MS.gene24440:CDS |
TTTGAGTTCATCATCAGTAA+TGG | 0.537702 | 1.1:+4101395 | MS.gene24440:CDS |
AATCTAGCTTCAAGCAGAGC+AGG | 0.546872 | 1.1:+4102527 | MS.gene24440:CDS |
TTGGATTGTGAGAAATTCAT+GGG | 0.548066 | 1.1:+4102463 | MS.gene24440:CDS |
GACCATGGTGTTGCAGCTGT+TGG | 0.548818 | 1.1:+4102413 | MS.gene24440:CDS |
TGCCTGAATCTGTTGATTGG+AGG | 0.549740 | 1.1:+4099624 | MS.gene24440:CDS |
TGCTGTTGAAGGAGGCGGTA+GGG | 0.550318 | 1.1:+4101716 | MS.gene24440:CDS |
CATCTTGTTCTTACCACCAA+AGG | 0.551674 | 1.1:-4103791 | None:intergenic |
GGTGGTAGCTGGGGTGAACA+AGG | 0.554597 | 1.1:+4102485 | MS.gene24440:CDS |
TTGATAGGTGAAGGTGGTGA+TGG | 0.555756 | 1.1:-4102617 | None:intergenic |
GCCGTTGCTGTTGAAGGAGG+CGG | 0.557434 | 1.1:+4101711 | MS.gene24440:CDS |
GGTGTTGCAGCTGTTGGATA+CGG | 0.561703 | 1.1:+4102419 | MS.gene24440:CDS |
CATATAGATTAGGGTTGACC+CGG | 0.561757 | 1.1:+4099474 | MS.gene24440:CDS |
ATGGAAGATCTTGCTTTGAG+TGG | 0.563923 | 1.1:+4102708 | MS.gene24440:CDS |
TAGTGCTGTTCCACATCTAC+CGG | 0.566895 | 1.1:-4102390 | None:intergenic |
CCAGCACGAGTGTCACAGAC+AGG | 0.571924 | 1.1:-4102797 | None:intergenic |
TGAAGAGGATTACCCTTACA+AGG | 0.572769 | 1.1:+4101430 | MS.gene24440:CDS |
AATTCATGGGGTGGTAGCTG+GGG | 0.574383 | 1.1:+4102476 | MS.gene24440:CDS |
GGAGATGATCGACATGTCTA+GGG | 0.575045 | 1.1:-4099267 | None:intergenic |
AATCGTTATGCGCCACGTGT+CGG | 0.576425 | 1.1:+4099593 | MS.gene24440:CDS |
GTCAAAGACCAAGCAAGTTG+TGG | 0.584862 | 1.1:+4099668 | MS.gene24440:CDS |
AAGGCCAATTCATCATAAGC+AGG | 0.585009 | 1.1:-4101660 | None:intergenic |
ACAGGGCAAGAACAACCCAT+TGG | 0.586674 | 1.1:+4103726 | MS.gene24440:intron |
GGTGTATTTACCGGTAGATG+TGG | 0.590389 | 1.1:+4102380 | MS.gene24440:CDS |
TCTGTTGATTGGAGGAAGGA+AGG | 0.590689 | 1.1:+4099632 | MS.gene24440:CDS |
GTTGGTTAGATCCGCGAACC+GGG | 0.598424 | 1.1:-4099492 | None:intergenic |
TACCATCAATAGCCTTGTAA+GGG | 0.599159 | 1.1:-4101442 | None:intergenic |
GAGTTCATCATCAGTAATGG+TGG | 0.599792 | 1.1:+4101398 | MS.gene24440:CDS |
ACTATCAGAACAAGAACTGG+TGG | 0.602270 | 1.1:+4101319 | MS.gene24440:CDS |
GTGAAGGTGGTGATGGTCCA+GGG | 0.603987 | 1.1:-4102610 | None:intergenic |
ATCGCCGTTGCTGTTGAAGG+AGG | 0.609464 | 1.1:+4101708 | MS.gene24440:CDS |
TTGCTGTTGAAGGAGGCGGT+AGG | 0.609931 | 1.1:+4101715 | MS.gene24440:CDS |
GAAGAGTGGTTAGTGAAACA+TGG | 0.615801 | 1.1:+4099356 | MS.gene24440:CDS |
CAAAGATCGATCCGAACCGT+AGG | 0.618623 | 1.1:+4099543 | MS.gene24440:CDS |
CAGCAAGTAGCAGACTCAAG+AGG | 0.620435 | 1.1:-4102740 | None:intergenic |
TAGTAGCTGTCACAGACAGA+TGG | 0.620790 | 1.1:-4102644 | None:intergenic |
TGGTAGATGTGACCAGAACA+GGG | 0.623188 | 1.1:+4101460 | MS.gene24440:CDS |
TGGTGGCATTGACTCTGAAG+AGG | 0.626193 | 1.1:+4101415 | MS.gene24440:CDS |
TCATACAACGAAGGATGCAA+TGG | 0.627683 | 1.1:+4101353 | MS.gene24440:CDS |
TACAACGAAGGATGCAATGG+TGG | 0.630463 | 1.1:+4101356 | MS.gene24440:CDS |
GGCAATTTATCACCGACACG+TGG | 0.638153 | 1.1:-4099605 | None:intergenic |
TGTTGACTATGTACGAAGAG+TGG | 0.640568 | 1.1:+4099342 | MS.gene24440:CDS |
TAGCTGTCACAGACAGATGG+TGG | 0.645708 | 1.1:-4102641 | None:intergenic |
ATTACTGATGATGAACTCAA+AGG | 0.646757 | 1.1:-4101393 | None:intergenic |
GGTGGCTTGATAGGTGAAGG+TGG | 0.647988 | 1.1:-4102623 | None:intergenic |
ACCGCCTCCTTCAACAGCAA+CGG | 0.651172 | 1.1:-4101712 | None:intergenic |
TGAATCTGTTGATTGGAGGA+AGG | 0.656666 | 1.1:+4099628 | MS.gene24440:CDS |
CACAGACAGGATACTCATGA+GGG | 0.662230 | 1.1:-4102784 | None:intergenic |
TCACAGACAGGATACTCATG+AGG | 0.662392 | 1.1:-4102785 | None:intergenic |
ATCCAACAGCTGCAACACCA+TGG | 0.676166 | 1.1:-4102415 | None:intergenic |
CGTAGGATGAAGAAATTGGG+TGG | 0.680087 | 1.1:+4099560 | MS.gene24440:CDS |
GATGGTGGCTTGATAGGTGA+AGG | 0.689206 | 1.1:-4102626 | None:intergenic |
GGAAGATCTTGCTTTGAGTG+GGG | 0.689687 | 1.1:+4102710 | MS.gene24440:CDS |
AAACATGGAAAATCCTACAA+CGG | 0.700433 | 1.1:+4099371 | MS.gene24440:CDS |
ATTGTGAGAAATTCATGGGG+TGG | 0.703535 | 1.1:+4102467 | MS.gene24440:CDS |
TGTGATACATCATACAACGA+AGG | 0.706999 | 1.1:+4101344 | MS.gene24440:CDS |
TGTGGAACAGCACTAGACCA+TGG | 0.711951 | 1.1:+4102398 | MS.gene24440:CDS |
TTACCACCAAAGGCCCAGTG+AGG | 0.714697 | 1.1:-4103781 | None:intergenic |
TGGATTGTGAGAAATTCATG+GGG | 0.737069 | 1.1:+4102464 | MS.gene24440:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ACAAAATTTTAATTCATAAA+AGG | + | chr1.1:4100253-4100272 | MS.gene24440:intron | 10.0% |
!!! | CAAAATTTTAATTCATAAAA+GGG | + | chr1.1:4100254-4100273 | MS.gene24440:intron | 10.0% |
!!! | GCTTTTTATAAAAAATTTAT+AGG | - | chr1.1:4103379-4103398 | None:intergenic | 10.0% |
!! | GTCAAAAAAAATAAATTAAC+AGG | - | chr1.1:4102282-4102301 | None:intergenic | 15.0% |
!! | TTAAACTAAAAACAATTCTT+TGG | + | chr1.1:4100516-4100535 | MS.gene24440:intron | 15.0% |
!!! | AACAAAAAAGCATTATATTA+TGG | - | chr1.1:4101031-4101050 | None:intergenic | 15.0% |
!!! | ATAATATTAGCAATTTTTTG+TGG | - | chr1.1:4101207-4101226 | None:intergenic | 15.0% |
!!! | TCTTAATTTAGTTGTTTTAT+CGG | + | chr1.1:4103639-4103658 | MS.gene24440:intron | 15.0% |
!!! | TTAGATTTTTCTTATTTTCT+TGG | + | chr1.1:4100064-4100083 | MS.gene24440:intron | 15.0% |
!! | AAACAAAGTCAAATTCTTAT+GGG | + | chr1.1:4103595-4103614 | MS.gene24440:intron | 20.0% |
!! | AAATTCATTGATGAACATAA+CGG | + | chr1.1:4099440-4099459 | MS.gene24440:CDS | 20.0% |
!! | AACTTACATATTCATATAAC+TGG | - | chr1.1:4101746-4101765 | None:intergenic | 20.0% |
!! | ACAATACACCAAAAAATTAT+GGG | - | chr1.1:4100327-4100346 | None:intergenic | 20.0% |
!! | ATGTATTGTTAGATACAATA+TGG | - | chr1.1:4102104-4102123 | None:intergenic | 20.0% |
!! | ATTAATTCTACTATGAAACT+AGG | + | chr1.1:4101771-4101790 | MS.gene24440:intron | 20.0% |
!! | TACAATACACCAAAAAATTA+TGG | - | chr1.1:4100328-4100347 | None:intergenic | 20.0% |
!! | TATAAATTGTTTAGAAGAGA+AGG | - | chr1.1:4102141-4102160 | None:intergenic | 20.0% |
!! | TATGTTCATCAATGAATTTA+AGG | - | chr1.1:4099439-4099458 | None:intergenic | 20.0% |
!! | TATTGTATCTAACAATACAT+TGG | + | chr1.1:4102104-4102123 | MS.gene24440:intron | 20.0% |
!!! | AGTATTCTGATTTTCTAAAA+TGG | + | chr1.1:4101929-4101948 | MS.gene24440:intron | 20.0% |
!!! | ATCTTCTTTTTTTCAATGAA+GGG | + | chr1.1:4101225-4101244 | MS.gene24440:intron | 20.0% |
!!! | ATTTTCTTGGATATGTTATT+AGG | + | chr1.1:4100077-4100096 | MS.gene24440:intron | 20.0% |
!!! | CTTAATTTAGTTGTTTTATC+GGG | + | chr1.1:4103640-4103659 | MS.gene24440:intron | 20.0% |
!!! | TAATGATGTACTTTAATTTG+TGG | + | chr1.1:4099984-4100003 | MS.gene24440:intron | 20.0% |
!!! | TATATTTCGTATGACTTTTA+AGG | - | chr1.1:4100803-4100822 | None:intergenic | 20.0% |
!!! | TATCTTCTTTTTTTCAATGA+AGG | + | chr1.1:4101224-4101243 | MS.gene24440:intron | 20.0% |
!!! | TCCAAGTAATGTTTTAAAAA+TGG | - | chr1.1:4103066-4103085 | None:intergenic | 20.0% |
!!! | TCCATTTTTAAAACATTACT+TGG | + | chr1.1:4103062-4103081 | MS.gene24440:intron | 20.0% |
! | AATATGGAATAAAAATTCCC+TGG | - | chr1.1:4101885-4101904 | None:intergenic | 25.0% |
! | AATCAAACTCAGTTAATCAT+GGG | - | chr1.1:4101129-4101148 | None:intergenic | 25.0% |
! | ACAATATGGTTTAGATACAT+TGG | - | chr1.1:4102090-4102109 | None:intergenic | 25.0% |
! | ACGAATAATAGACATGTTAT+AGG | - | chr1.1:4103495-4103514 | None:intergenic | 25.0% |
! | AGTTAAACTAATAAGCTCTA+TGG | + | chr1.1:4103414-4103433 | MS.gene24440:intron | 25.0% |
! | ATGACAATAGTAAATGTTTG+TGG | + | chr1.1:4101509-4101528 | MS.gene24440:intron | 25.0% |
! | ATTGATATATTGAGTACTCT+TGG | - | chr1.1:4100979-4100998 | None:intergenic | 25.0% |
! | CAAACAAAGTCAAATTCTTA+TGG | + | chr1.1:4103594-4103613 | MS.gene24440:intron | 25.0% |
! | CAATCATTGGTGTAATAATA+TGG | + | chr1.1:4100995-4101014 | MS.gene24440:intron | 25.0% |
! | GAAAACAATCCATACAAATT+TGG | - | chr1.1:4103672-4103691 | None:intergenic | 25.0% |
! | GTACTCAATATATCAATCAT+TGG | + | chr1.1:4100982-4101001 | MS.gene24440:intron | 25.0% |
! | TAACACTCTAATTCTTTCAT+TGG | + | chr1.1:4101561-4101580 | MS.gene24440:intron | 25.0% |
! | TAATCAAACTCAGTTAATCA+TGG | - | chr1.1:4101130-4101149 | None:intergenic | 25.0% |
! | TGAATTCGACATATAGATTA+GGG | + | chr1.1:4099465-4099484 | MS.gene24440:CDS | 25.0% |
! | TGATCAAGCACATAAAAATT+TGG | - | chr1.1:4103707-4103726 | None:intergenic | 25.0% |
! | TGATTAACTGAGTTTGATTA+AGG | + | chr1.1:4101130-4101149 | MS.gene24440:intron | 25.0% |
! | TGCATTTGTTTGTTCAATAT+GGG | + | chr1.1:4100704-4100723 | MS.gene24440:intron | 25.0% |
! | TTATTTAAACTGTTTGATCG+TGG | - | chr1.1:4102986-4103005 | None:intergenic | 25.0% |
! | TTGAATAAAAATCATCTGTC+TGG | + | chr1.1:4102213-4102232 | MS.gene24440:intron | 25.0% |
! | TTGAATTCGACATATAGATT+AGG | + | chr1.1:4099464-4099483 | MS.gene24440:CDS | 25.0% |
! | TTGATATATTGAGTACTCTT+GGG | - | chr1.1:4100978-4100997 | None:intergenic | 25.0% |
! | TTGCATTTGTTTGTTCAATA+TGG | + | chr1.1:4100703-4100722 | MS.gene24440:intron | 25.0% |
!! | AATTTTATACTGTGTTGCAT+TGG | + | chr1.1:4101794-4101813 | MS.gene24440:intron | 25.0% |
!! | ATTTTATACTGTGTTGCATT+GGG | + | chr1.1:4101795-4101814 | MS.gene24440:intron | 25.0% |
!! | CATAAGAATTTGACTTTGTT+TGG | - | chr1.1:4103596-4103615 | None:intergenic | 25.0% |
!! | TTAAGGAACATGATAGTTTT+TGG | + | chr1.1:4101147-4101166 | MS.gene24440:intron | 25.0% |
!! | TTTAAGGTAGACATGATTAA+AGG | - | chr1.1:4100787-4100806 | None:intergenic | 25.0% |
!!! | ATTTTAATGATCTGAGAGTT+AGG | - | chr1.1:4100441-4100460 | None:intergenic | 25.0% |
!!! | CTTTGTTTTGTAGTCATATA+AGG | + | chr1.1:4100594-4100613 | MS.gene24440:intron | 25.0% |
!!! | TGATTTAAAATTTTGTGCAC+CGG | - | chr1.1:4100394-4100413 | None:intergenic | 25.0% |
!!! | TTCATTGGTTTTAAACTGTT+TGG | + | chr1.1:4101576-4101595 | MS.gene24440:intron | 25.0% |
!!! | TTTTTGATTGGATTTTCACT+TGG | + | chr1.1:4102870-4102889 | MS.gene24440:intron | 25.0% |
AAACATGGAAAATCCTACAA+CGG | + | chr1.1:4099371-4099390 | MS.gene24440:CDS | 30.0% | |
AGGAAATCAGATGAATTATC+AGG | - | chr1.1:4100162-4100181 | None:intergenic | 30.0% | |
AGTAAAAGATAAGGTTGACT+TGG | - | chr1.1:4102842-4102861 | None:intergenic | 30.0% | |
ATAACGTCATATTCATGTCA+TGG | + | chr1.1:4101818-4101837 | MS.gene24440:intron | 30.0% | |
ATACAATACACCAAGAAACT+GGG | - | chr1.1:4100361-4100380 | None:intergenic | 30.0% | |
ATCAAACTCAGTTAATCATG+GGG | - | chr1.1:4101128-4101147 | None:intergenic | 30.0% | |
ATGAAATCCCAAAGCAAATA+AGG | - | chr1.1:4100182-4100201 | None:intergenic | 30.0% | |
ATGCAAGCAAGTAAAAGATA+AGG | - | chr1.1:4102851-4102870 | None:intergenic | 30.0% | |
ATTGCGTGATTATGTGAATA+TGG | - | chr1.1:4101901-4101920 | None:intergenic | 30.0% | |
ATTGGATTGTGAGAAATTCA+TGG | + | chr1.1:4102462-4102481 | MS.gene24440:CDS | 30.0% | |
CATTACTTGGAACTAATTGT+TGG | + | chr1.1:4103075-4103094 | MS.gene24440:intron | 30.0% | |
CCAATTTGAGCTGTTTAAAA+CGG | - | chr1.1:4102956-4102975 | None:intergenic | 30.0% | |
CCATCTTATCCAATTAAGAA+TGG | + | chr1.1:4102572-4102591 | MS.gene24440:CDS | 30.0% | |
CCATGTTATGATTGATTGAT+AGG | - | chr1.1:4100751-4100770 | None:intergenic | 30.0% | |
CCATTCTTAATTGGATAAGA+TGG | - | chr1.1:4102575-4102594 | None:intergenic | 30.0% | |
CCTATCAATCAATCATAACA+TGG | + | chr1.1:4100748-4100767 | MS.gene24440:intron | 30.0% | |
GCAAATCAAAATCAATCGTA+TGG | - | chr1.1:4100488-4100507 | None:intergenic | 30.0% | |
GGAATAAATAAGATTGTGAC+AGG | + | chr1.1:4101284-4101303 | MS.gene24440:CDS | 30.0% | |
GGGAATTATCCAAATTTGTA+TGG | + | chr1.1:4103660-4103679 | MS.gene24440:intron | 30.0% | |
GTAGATAATCATGTATCATG+TGG | + | chr1.1:4100917-4100936 | MS.gene24440:intron | 30.0% | |
GTTTAGGTGAAAAAGACAAA+AGG | + | chr1.1:4099393-4099412 | MS.gene24440:CDS | 30.0% | |
TACTTCTGCTCAAGAAATAA+AGG | - | chr1.1:4101074-4101093 | None:intergenic | 30.0% | |
TTGGATTGTGAGAAATTCAT+GGG | + | chr1.1:4102463-4102482 | MS.gene24440:CDS | 30.0% | |
TTTATCTACTGAGACTGTTT+GGG | + | chr1.1:4103452-4103471 | MS.gene24440:intron | 30.0% | |
TTTGTCTCTATCGAATGTAT+AGG | - | chr1.1:4102176-4102195 | None:intergenic | 30.0% | |
! | AGAGTATAGAAGCAAGTTTT+TGG | + | chr1.1:4099517-4099536 | MS.gene24440:CDS | 30.0% |
! | ATTACTGATGATGAACTCAA+AGG | - | chr1.1:4101396-4101415 | None:intergenic | 30.0% |
! | ATTTTTATGTGCTTGATCAC+AGG | + | chr1.1:4103708-4103727 | MS.gene24440:intron | 30.0% |
! | CTGATTTCCTTATTTGCTTT+GGG | + | chr1.1:4100172-4100191 | MS.gene24440:intron | 30.0% |
! | GAGTATAGAAGCAAGTTTTT+GGG | + | chr1.1:4099518-4099537 | MS.gene24440:CDS | 30.0% |
! | GATAATCTGAAATCAGCTTA+TGG | - | chr1.1:4103335-4103354 | None:intergenic | 30.0% |
! | TACTTGCTTGCATTTTTGAT+TGG | + | chr1.1:4102858-4102877 | MS.gene24440:intron | 30.0% |
! | TCTGATTTCCTTATTTGCTT+TGG | + | chr1.1:4100171-4100190 | MS.gene24440:intron | 30.0% |
! | TTTGAGTTCATCATCAGTAA+TGG | + | chr1.1:4101395-4101414 | MS.gene24440:CDS | 30.0% |
! | TTTTTATGTGCTTGATCACA+GGG | + | chr1.1:4103709-4103728 | MS.gene24440:intron | 30.0% |
!! | CTAATTGTTGGCTACTATTT+TGG | + | chr1.1:4103087-4103106 | MS.gene24440:intron | 30.0% |
!! | GATTTAAAATTTTGTGCACC+GGG | - | chr1.1:4100393-4100412 | None:intergenic | 30.0% |
!!! | GGATTTTTTTCCTGTTGATA+GGG | + | chr1.1:4103108-4103127 | MS.gene24440:intron | 30.0% |
!!! | TGGATTTTTTTCCTGTTGAT+AGG | + | chr1.1:4103107-4103126 | MS.gene24440:intron | 30.0% |
!!! | TTTTGCTTGTTGATTTGTCT+GGG | - | chr1.1:4099307-4099326 | None:intergenic | 30.0% |
AAAGTCCAAATGAACGCAAA+AGG | - | chr1.1:4103141-4103160 | None:intergenic | 35.0% | |
AACCGTAGGATGAAGAAATT+GGG | + | chr1.1:4099557-4099576 | MS.gene24440:CDS | 35.0% | |
AAGTCCAAATGAACGCAAAA+GGG | - | chr1.1:4103140-4103159 | None:intergenic | 35.0% | |
AATAAAAATTCCCTGGAGTC+AGG | - | chr1.1:4101878-4101897 | None:intergenic | 35.0% | |
AATTGCCTGAATCTGTTGAT+TGG | + | chr1.1:4099621-4099640 | MS.gene24440:CDS | 35.0% | |
AATTTCTTCATCCTACGGTT+CGG | - | chr1.1:4099557-4099576 | None:intergenic | 35.0% | |
AGTCTTTACGTTTCAATGTC+CGG | - | chr1.1:4102918-4102937 | None:intergenic | 35.0% | |
ATAAAAATTCCCTGGAGTCA+GGG | - | chr1.1:4101877-4101896 | None:intergenic | 35.0% | |
ATGAAAGATATCCCTAGTAG+TGG | + | chr1.1:4102023-4102042 | MS.gene24440:intron | 35.0% | |
ATGCTATATAGCCACTACTA+GGG | - | chr1.1:4102037-4102056 | None:intergenic | 35.0% | |
ATTCCATTTGTCTCTTGTCA+GGG | + | chr1.1:4102359-4102378 | MS.gene24440:intron | 35.0% | |
CAAATGCAAACCAAGAATTC+TGG | - | chr1.1:4100692-4100711 | None:intergenic | 35.0% | |
CAATGAACAGACACTATCTA+CGG | - | chr1.1:4103014-4103033 | None:intergenic | 35.0% | |
CAGAAAACGGGAAAGATTAT+TGG | + | chr1.1:4102444-4102463 | MS.gene24440:CDS | 35.0% | |
CATACAATACACCAAGAAAC+TGG | - | chr1.1:4100362-4100381 | None:intergenic | 35.0% | |
CCTAAAATCACCAGAATTCT+TGG | + | chr1.1:4100679-4100698 | MS.gene24440:intron | 35.0% | |
GATTCAAAGCATGTTTCAGA+TGG | + | chr1.1:4101951-4101970 | MS.gene24440:intron | 35.0% | |
GGCTATTGAAGATAATGTGA+AGG | - | chr1.1:4102261-4102280 | None:intergenic | 35.0% | |
GTAGTCATATAAGGTCTGTT+TGG | + | chr1.1:4100603-4100622 | MS.gene24440:intron | 35.0% | |
GTGGAAGATAGTTAATCAGT+AGG | + | chr1.1:4101528-4101547 | MS.gene24440:intron | 35.0% | |
GTTTATCTACTGAGACTGTT+TGG | + | chr1.1:4103451-4103470 | MS.gene24440:intron | 35.0% | |
TATCGAATGTATAGGCAATG+AGG | - | chr1.1:4102168-4102187 | None:intergenic | 35.0% | |
TATTCCATTTGTCTCTTGTC+AGG | + | chr1.1:4102358-4102377 | MS.gene24440:intron | 35.0% | |
TGGATTGTGAGAAATTCATG+GGG | + | chr1.1:4102464-4102483 | MS.gene24440:CDS | 35.0% | |
TGTGATACATCATACAACGA+AGG | + | chr1.1:4101344-4101363 | MS.gene24440:CDS | 35.0% | |
TGTTCCTGCTTATGATGAAT+TGG | + | chr1.1:4101656-4101675 | MS.gene24440:CDS | 35.0% | |
TGTTGCTGTATTTACGAGTA+TGG | + | chr1.1:4102689-4102708 | MS.gene24440:CDS | 35.0% | |
TTAATGATCTGAGAGTTAGG+AGG | - | chr1.1:4100438-4100457 | None:intergenic | 35.0% | |
TTCACTATCAGAACAAGAAC+TGG | + | chr1.1:4101316-4101335 | MS.gene24440:CDS | 35.0% | |
TTGACTTTGCTTCACAAGAT+TGG | + | chr1.1:4102297-4102316 | MS.gene24440:intron | 35.0% | |
TTTCAATGAAGGGAGTTGTT+GGG | + | chr1.1:4101235-4101254 | MS.gene24440:intron | 35.0% | |
TTTCCAGATATTGCTACACA+TGG | - | chr1.1:4099948-4099967 | None:intergenic | 35.0% | |
TTTGGATTTCGTTTGCAGTA+TGG | + | chr1.1:4100534-4100553 | MS.gene24440:intron | 35.0% | |
! | CCAAGAATTCTGGTGATTTT+AGG | - | chr1.1:4100682-4100701 | None:intergenic | 35.0% |
! | GTTTCTTGGTGTATTGTATG+TGG | + | chr1.1:4100362-4100381 | MS.gene24440:intron | 35.0% |
! | TCGTCGTCGTAAAACTTTTA+AGG | - | chr1.1:4100847-4100866 | None:intergenic | 35.0% |
! | TTTTCAATGAAGGGAGTTGT+TGG | + | chr1.1:4101234-4101253 | MS.gene24440:intron | 35.0% |
! | TTTTTCACCTAAACCGTTGT+AGG | - | chr1.1:4099387-4099406 | None:intergenic | 35.0% |
!! | CAATGCTTTAAAAGCCAAAC+CGG | + | chr1.1:4102896-4102915 | MS.gene24440:intron | 35.0% |
!! | CCGTTTTAAACAGCTCAAAT+TGG | + | chr1.1:4102953-4102972 | MS.gene24440:intron | 35.0% |
!! | TACCATCAATAGCCTTGTAA+GGG | - | chr1.1:4101445-4101464 | None:intergenic | 35.0% |
!!! | CTTTTGCTTGTTGATTTGTC+TGG | - | chr1.1:4099308-4099327 | None:intergenic | 35.0% |
AAAAATTATGGGACCCTTCC+CGG | - | chr1.1:4100316-4100335 | None:intergenic | 40.0% | |
AAAATCATCTGTCTGGCAAG+TGG | + | chr1.1:4102220-4102239 | MS.gene24440:intron | 40.0% | |
AAACCAAATTCTCTGCAGTC+AGG | - | chr1.1:4101854-4101873 | None:intergenic | 40.0% | |
AACAGACACTATCTACGGTT+CGG | - | chr1.1:4103009-4103028 | None:intergenic | 40.0% | |
AACCAAATTCTCTGCAGTCA+GGG | - | chr1.1:4101853-4101872 | None:intergenic | 40.0% | |
AAGGCCAATTCATCATAAGC+AGG | - | chr1.1:4101663-4101682 | None:intergenic | 40.0% | |
ACTATCAGAACAAGAACTGG+TGG | + | chr1.1:4101319-4101338 | MS.gene24440:CDS | 40.0% | |
ATTGTGAGAAATTCATGGGG+TGG | + | chr1.1:4102467-4102486 | MS.gene24440:CDS | 40.0% | |
CACCCAATTTCTTCATCCTA+CGG | - | chr1.1:4099562-4099581 | None:intergenic | 40.0% | |
CAGATATTGCTACACATGGA+TGG | - | chr1.1:4099944-4099963 | None:intergenic | 40.0% | |
CATAGTCAACACTTCTTCGT+TGG | - | chr1.1:4099333-4099352 | None:intergenic | 40.0% | |
CATATAGATTAGGGTTGACC+CGG | + | chr1.1:4099474-4099493 | MS.gene24440:CDS | 40.0% | |
CATCCATGTGTAGCAATATC+TGG | + | chr1.1:4099942-4099961 | MS.gene24440:intron | 40.0% | |
CATCTTGTTCTTACCACCAA+AGG | - | chr1.1:4103794-4103813 | None:intergenic | 40.0% | |
CATGCTATATAGCCACTACT+AGG | - | chr1.1:4102038-4102057 | None:intergenic | 40.0% | |
CTAGTAGTGGCTATATAGCA+TGG | + | chr1.1:4102036-4102055 | MS.gene24440:intron | 40.0% | |
CTTGCTTCTATACTCTTCGT+TGG | - | chr1.1:4099513-4099532 | None:intergenic | 40.0% | |
GAACCGTAGGATGAAGAAAT+TGG | + | chr1.1:4099556-4099575 | MS.gene24440:CDS | 40.0% | |
GAAGAGTGGTTAGTGAAACA+TGG | + | chr1.1:4099356-4099375 | MS.gene24440:CDS | 40.0% | |
GAGTTCATCATCAGTAATGG+TGG | + | chr1.1:4101398-4101417 | MS.gene24440:CDS | 40.0% | |
GCAATCACGCTTTGTGATTT+CGG | - | chr1.1:4101978-4101997 | None:intergenic | 40.0% | |
GGAAAATCCTACAACGGTTT+AGG | + | chr1.1:4099377-4099396 | MS.gene24440:CDS | 40.0% | |
GGGTTCTGTCCATTCTTAAT+TGG | - | chr1.1:4102584-4102603 | None:intergenic | 40.0% | |
GTTGGATACGGTACAGAAAA+CGG | + | chr1.1:4102431-4102450 | MS.gene24440:CDS | 40.0% | |
TAAAACTCCCCGCATAAGTA+GGG | + | chr1.1:4100289-4100308 | MS.gene24440:intron | 40.0% | |
TACCCTTACAAGGCTATTGA+TGG | + | chr1.1:4101440-4101459 | MS.gene24440:CDS | 40.0% | |
TATAGCATGGCAGCAATGAA+TGG | + | chr1.1:4102049-4102068 | MS.gene24440:intron | 40.0% | |
TCATACAACGAAGGATGCAA+TGG | + | chr1.1:4101353-4101372 | MS.gene24440:CDS | 40.0% | |
TCTTGTCAGGGTGTATTTAC+CGG | + | chr1.1:4102371-4102390 | MS.gene24440:intron | 40.0% | |
TGAAGAAATTGGGTGGTTCT+AGG | + | chr1.1:4099567-4099586 | MS.gene24440:CDS | 40.0% | |
TGAAGAGGATTACCCTTACA+AGG | + | chr1.1:4101430-4101449 | MS.gene24440:CDS | 40.0% | |
TGAATGACTTCACTCCCAAT+GGG | - | chr1.1:4103744-4103763 | None:intergenic | 40.0% | |
TGTAAGATATCCATCAGCTG+TGG | - | chr1.1:4100659-4100678 | None:intergenic | 40.0% | |
TTACGTTTCAATGTCCGGTT+TGG | - | chr1.1:4102913-4102932 | None:intergenic | 40.0% | |
TTCCTCCAATCAACAGATTC+AGG | - | chr1.1:4099629-4099648 | None:intergenic | 40.0% | |
TTGAATGACTTCACTCCCAA+TGG | - | chr1.1:4103745-4103764 | None:intergenic | 40.0% | |
TTGGATACGGTACAGAAAAC+GGG | + | chr1.1:4102432-4102451 | MS.gene24440:CDS | 40.0% | |
! | AAAATTTTGTGCACCGGGTA+AGG | - | chr1.1:4100388-4100407 | None:intergenic | 40.0% |
! | ATGGAAGATCTTGCTTTGAG+TGG | + | chr1.1:4102708-4102727 | MS.gene24440:CDS | 40.0% |
! | ATGTCCCTTTTGCGTTCATT+TGG | + | chr1.1:4103133-4103152 | MS.gene24440:intron | 40.0% |
! | TGAATCTGTTGATTGGAGGA+AGG | + | chr1.1:4099628-4099647 | MS.gene24440:CDS | 40.0% |
! | TGGAAGATCTTGCTTTGAGT+GGG | + | chr1.1:4102709-4102728 | MS.gene24440:CDS | 40.0% |
! | TGTTGACTATGTACGAAGAG+TGG | + | chr1.1:4099342-4099361 | MS.gene24440:CDS | 40.0% |
!! | CTACCATCAATAGCCTTGTA+AGG | - | chr1.1:4101446-4101465 | None:intergenic | 40.0% |
!! | TGATGAATTGGCCTTGCAAA+AGG | + | chr1.1:4101668-4101687 | MS.gene24440:CDS | 40.0% |
!!! | CGGTTTGGCTTTTAAAGCAT+TGG | - | chr1.1:4102898-4102917 | None:intergenic | 40.0% |
!!! | GGAAGGGTCCCATAATTTTT+TGG | + | chr1.1:4100316-4100335 | MS.gene24440:intron | 40.0% |
AAATTCATGGGGTGGTAGCT+GGG | + | chr1.1:4102475-4102494 | MS.gene24440:CDS | 45.0% | |
ACACCCTGACAAGAGACAAA+TGG | - | chr1.1:4102365-4102384 | None:intergenic | 45.0% | |
ACTGGTTGAACTGTCTTGTC+TGG | + | chr1.1:4103038-4103057 | MS.gene24440:intron | 45.0% | |
AGGAGATGATCGACATGTCT+AGG | - | chr1.1:4099271-4099290 | None:intergenic | 45.0% | |
AGTATCATCACCACAGCTGA+TGG | + | chr1.1:4100646-4100665 | MS.gene24440:intron | 45.0% | |
ATGGTAGATGTGACCAGAAC+AGG | + | chr1.1:4101459-4101478 | MS.gene24440:CDS | 45.0% | |
CACAGACAGGATACTCATGA+GGG | - | chr1.1:4102787-4102806 | None:intergenic | 45.0% | |
CCAAGTAACTAACCCTGTTC+TGG | - | chr1.1:4101475-4101494 | None:intergenic | 45.0% | |
CGTAGGATGAAGAAATTGGG+TGG | + | chr1.1:4099560-4099579 | MS.gene24440:CDS | 45.0% | |
CTAAAACTCCCCGCATAAGT+AGG | + | chr1.1:4100288-4100307 | MS.gene24440:intron | 45.0% | |
CTCAGTTAATCATGGGGTGA+AGG | - | chr1.1:4101122-4101141 | None:intergenic | 45.0% | |
GGAGATGATCGACATGTCTA+GGG | - | chr1.1:4099270-4099289 | None:intergenic | 45.0% | |
GGCTAGTGAAACTGTGAAAG+TGG | - | chr1.1:4099249-4099268 | None:intergenic | 45.0% | |
GGTGTATTTACCGGTAGATG+TGG | + | chr1.1:4102380-4102399 | MS.gene24440:CDS | 45.0% | |
GTCAAAGACCAAGCAAGTTG+TGG | + | chr1.1:4099668-4099687 | MS.gene24440:CDS | 45.0% | |
GTGTCTGTTCATTGCTCAAC+TGG | + | chr1.1:4103020-4103039 | MS.gene24440:intron | 45.0% | |
TACAACGAAGGATGCAATGG+TGG | + | chr1.1:4101356-4101375 | MS.gene24440:CDS | 45.0% | |
TAGTAGCTGTCACAGACAGA+TGG | - | chr1.1:4102647-4102666 | None:intergenic | 45.0% | |
TCACAGACAGGATACTCATG+AGG | - | chr1.1:4102788-4102807 | None:intergenic | 45.0% | |
TCGTGCTGGACTTTGTCTTA+AGG | + | chr1.1:4102811-4102830 | MS.gene24440:CDS | 45.0% | |
TGAGACTGTTTGGGAGAACA+TGG | + | chr1.1:4103461-4103480 | MS.gene24440:intron | 45.0% | |
TGGTAGATGTGACCAGAACA+GGG | + | chr1.1:4101460-4101479 | MS.gene24440:CDS | 45.0% | |
TTCCCTGACTGCAGAGAATT+TGG | + | chr1.1:4101848-4101867 | MS.gene24440:intron | 45.0% | |
TTGATAGGTGAAGGTGGTGA+TGG | - | chr1.1:4102620-4102639 | None:intergenic | 45.0% | |
! | AATCTAGCTTCAAGCAGAGC+AGG | + | chr1.1:4102527-4102546 | MS.gene24440:CDS | 45.0% |
! | AATTTGGTTTCCCTGACTCC+AGG | + | chr1.1:4101864-4101883 | MS.gene24440:intron | 45.0% |
! | AGTGCTTACCACAACTTGCT+TGG | - | chr1.1:4099679-4099698 | None:intergenic | 45.0% |
! | ATTTGGTTTCCCTGACTCCA+GGG | + | chr1.1:4101865-4101884 | MS.gene24440:intron | 45.0% |
! | GGAAGATCTTGCTTTGAGTG+GGG | + | chr1.1:4102710-4102729 | MS.gene24440:CDS | 45.0% |
! | GTATTGTATGTGGCCTTACC+CGG | + | chr1.1:4100372-4100391 | MS.gene24440:intron | 45.0% |
! | GTTTGCAACAGCCTTTTGCA+AGG | - | chr1.1:4101682-4101701 | None:intergenic | 45.0% |
! | TAGTGCTGTTCCACATCTAC+CGG | - | chr1.1:4102393-4102412 | None:intergenic | 45.0% |
! | TCTGTTGATTGGAGGAAGGA+AGG | + | chr1.1:4099632-4099651 | MS.gene24440:CDS | 45.0% |
! | TGCCTGAATCTGTTGATTGG+AGG | + | chr1.1:4099624-4099643 | MS.gene24440:CDS | 45.0% |
!! | AGGATGCAATGGTGGACTTA+TGG | + | chr1.1:4101364-4101383 | MS.gene24440:CDS | 45.0% |
!! | CCAGAACAGGGTTAGTTACT+TGG | + | chr1.1:4101472-4101491 | MS.gene24440:intron | 45.0% |
!! | GCTTGTTGATTTGTCTGGGT+GGG | - | chr1.1:4099303-4099322 | None:intergenic | 45.0% |
!! | TGCTTGTTGATTTGTCTGGG+TGG | - | chr1.1:4099304-4099323 | None:intergenic | 45.0% |
!!! | TAATTTTAAAATTAAATACA+AGG | + | chr1.1:4100032-4100051 | MS.gene24440:intron | 5.0% |
AATCGTTATGCGCCACGTGT+CGG | + | chr1.1:4099593-4099612 | MS.gene24440:CDS | 50.0% | |
AATTCATGGGGTGGTAGCTG+GGG | + | chr1.1:4102476-4102495 | MS.gene24440:CDS | 50.0% | |
ACAGGGCAAGAACAACCCAT+TGG | + | chr1.1:4103726-4103745 | MS.gene24440:intron | 50.0% | |
AGCTACTACAGCTGTGCTGA+AGG | + | chr1.1:4102659-4102678 | MS.gene24440:CDS | 50.0% | |
AGGGACATCACCCTATCAAC+AGG | - | chr1.1:4103121-4103140 | None:intergenic | 50.0% | |
ATCCAACAGCTGCAACACCA+TGG | - | chr1.1:4102418-4102437 | None:intergenic | 50.0% | |
CAAAGATCGATCCGAACCGT+AGG | + | chr1.1:4099543-4099562 | MS.gene24440:CDS | 50.0% | |
CAGCAAGTAGCAGACTCAAG+AGG | - | chr1.1:4102743-4102762 | None:intergenic | 50.0% | |
CAGGGCAAGAACAACCCATT+GGG | + | chr1.1:4103727-4103746 | MS.gene24440:intron | 50.0% | |
CGCAGTCTTACCCAGTTTCT+TGG | + | chr1.1:4100348-4100367 | MS.gene24440:intron | 50.0% | |
GAAATTCATGGGGTGGTAGC+TGG | + | chr1.1:4102474-4102493 | MS.gene24440:CDS | 50.0% | |
GGCAATTTATCACCGACACG+TGG | - | chr1.1:4099608-4099627 | None:intergenic | 50.0% | |
TAGCTGTCACAGACAGATGG+TGG | - | chr1.1:4102644-4102663 | None:intergenic | 50.0% | |
TCAAGCAGAGCAGGAAAGTG+TGG | + | chr1.1:4102536-4102555 | MS.gene24440:CDS | 50.0% | |
TCAGCAATCGCAGCTGTTGA+AGG | + | chr1.1:4101263-4101282 | MS.gene24440:CDS | 50.0% | |
TGTGGAACAGCACTAGACCA+TGG | + | chr1.1:4102398-4102417 | MS.gene24440:CDS | 50.0% | |
! | CAGACAGATGGTGGCTTGAT+AGG | - | chr1.1:4102635-4102654 | None:intergenic | 50.0% |
! | GATGGTGGCTTGATAGGTGA+AGG | - | chr1.1:4102629-4102648 | None:intergenic | 50.0% |
! | GGTGTTGCAGCTGTTGGATA+CGG | + | chr1.1:4102419-4102438 | MS.gene24440:CDS | 50.0% |
!! | TGGTGGCATTGACTCTGAAG+AGG | + | chr1.1:4101415-4101434 | MS.gene24440:CDS | 50.0% |
ACCGCCTCCTTCAACAGCAA+CGG | - | chr1.1:4101715-4101734 | None:intergenic | 55.0% | |
CCTTCAACAGCAACGGCGAT+AGG | - | chr1.1:4101708-4101727 | None:intergenic | 55.0% | |
CTTCCCGGACCCTACTTATG+CGG | - | chr1.1:4100301-4100320 | None:intergenic | 55.0% | |
GCATAAGTAGGGTCCGGGAA+GGG | + | chr1.1:4100300-4100319 | MS.gene24440:intron | 55.0% | |
GGTGGCTTGATAGGTGAAGG+TGG | - | chr1.1:4102626-4102645 | None:intergenic | 55.0% | |
GTTGGTTAGATCCGCGAACC+GGG | - | chr1.1:4099495-4099514 | None:intergenic | 55.0% | |
TGCTGTTGAAGGAGGCGGTA+GGG | + | chr1.1:4101716-4101735 | MS.gene24440:CDS | 55.0% | |
TTACCACCAAAGGCCCAGTG+AGG | - | chr1.1:4103784-4103803 | None:intergenic | 55.0% | |
TTCCCGGACCCTACTTATGC+GGG | - | chr1.1:4100300-4100319 | None:intergenic | 55.0% | |
! | ATCGCCGTTGCTGTTGAAGG+AGG | + | chr1.1:4101708-4101727 | MS.gene24440:CDS | 55.0% |
! | ATTAGGGTTGACCCGGTTCG+CGG | + | chr1.1:4099481-4099500 | MS.gene24440:CDS | 55.0% |
! | CCTATCGCCGTTGCTGTTGA+AGG | + | chr1.1:4101705-4101724 | MS.gene24440:CDS | 55.0% |
! | CGTTGGTTAGATCCGCGAAC+CGG | - | chr1.1:4099496-4099515 | None:intergenic | 55.0% |
! | TTGCTGTTGAAGGAGGCGGT+AGG | + | chr1.1:4101715-4101734 | MS.gene24440:CDS | 55.0% |
!! | AGGAAGGAAGGCGCTGTTGT+TGG | + | chr1.1:4099644-4099663 | MS.gene24440:CDS | 55.0% |
!! | GACCATGGTGTTGCAGCTGT+TGG | + | chr1.1:4102413-4102432 | MS.gene24440:CDS | 55.0% |
!! | GTCTGGGTGGGTTTTGTCGT+AGG | - | chr1.1:4099291-4099310 | None:intergenic | 55.0% |
!! | GTGAAGGTGGTGATGGTCCA+GGG | - | chr1.1:4102613-4102632 | None:intergenic | 55.0% |
!! | GTGGTGATGGTCCAGGGTTA+GGG | - | chr1.1:4102607-4102626 | None:intergenic | 55.0% |
!! | TGGTGATGGTCCAGGGTTAG+GGG | - | chr1.1:4102606-4102625 | None:intergenic | 55.0% |
AAGCCTCACTGGGCCTTTGG+TGG | + | chr1.1:4103778-4103797 | MS.gene24440:CDS | 60.0% | |
ACCAAAGGCCCAGTGAGGCT+TGG | - | chr1.1:4103779-4103798 | None:intergenic | 60.0% | |
CAACAGCAACGGCGATAGGC+TGG | - | chr1.1:4101704-4101723 | None:intergenic | 60.0% | |
CACTCCTGCCAAGCCTCACT+GGG | + | chr1.1:4103768-4103787 | MS.gene24440:CDS | 60.0% | |
CCAGCACGAGTGTCACAGAC+AGG | - | chr1.1:4102800-4102819 | None:intergenic | 60.0% | |
CCTGTCTGTGACACTCGTGC+TGG | + | chr1.1:4102797-4102816 | MS.gene24440:CDS | 60.0% | |
CGCATAAGTAGGGTCCGGGA+AGG | + | chr1.1:4100299-4100318 | MS.gene24440:intron | 60.0% | |
CTCCCCGCATAAGTAGGGTC+CGG | + | chr1.1:4100294-4100313 | MS.gene24440:intron | 60.0% | |
GGTGGTAGCTGGGGTGAACA+AGG | + | chr1.1:4102485-4102504 | MS.gene24440:CDS | 60.0% | |
GTGATGGTCCAGGGTTAGGG+GGG | - | chr1.1:4102604-4102623 | None:intergenic | 60.0% | |
TCCCCGCATAAGTAGGGTCC+GGG | + | chr1.1:4100295-4100314 | MS.gene24440:intron | 60.0% | |
TCCCGGACCCTACTTATGCG+GGG | - | chr1.1:4100299-4100318 | None:intergenic | 60.0% | |
! | GCCGTTGCTGTTGAAGGAGG+CGG | + | chr1.1:4101711-4101730 | MS.gene24440:CDS | 60.0% |
! | GGTGATGGTCCAGGGTTAGG+GGG | - | chr1.1:4102605-4102624 | None:intergenic | 60.0% |
!! | GGTGAAGGTGGTGATGGTCC+AGG | - | chr1.1:4102614-4102633 | None:intergenic | 60.0% |
!! | GGTGGTGATGGTCCAGGGTT+AGG | - | chr1.1:4102608-4102627 | None:intergenic | 60.0% |
!! | TGCGGGGAGTTTTAGTGCGC+AGG | - | chr1.1:4100283-4100302 | None:intergenic | 60.0% |
AAGGCCCAGTGAGGCTTGGC+AGG | - | chr1.1:4103775-4103794 | None:intergenic | 65.0% | |
GCACTCCTGCCAAGCCTCAC+TGG | + | chr1.1:4103767-4103786 | MS.gene24440:CDS | 65.0% | |
GCCAAGCCTCACTGGGCCTT+TGG | + | chr1.1:4103775-4103794 | MS.gene24440:CDS | 65.0% | |
GGACAGAACCCCCCTAACCC+TGG | + | chr1.1:4102593-4102612 | MS.gene24440:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 4099206 | 4103825 | 4099206 | ID=MS.gene24440 |
chr1.1 | mRNA | 4099206 | 4103825 | 4099206 | ID=MS.gene24440.t1;Parent=MS.gene24440 |
chr1.1 | exon | 4099206 | 4099689 | 4099206 | ID=MS.gene24440.t1.exon1;Parent=MS.gene24440.t1 |
chr1.1 | CDS | 4099206 | 4099689 | 4099206 | ID=cds.MS.gene24440.t1;Parent=MS.gene24440.t1 |
chr1.1 | exon | 4101246 | 4101481 | 4101246 | ID=MS.gene24440.t1.exon2;Parent=MS.gene24440.t1 |
chr1.1 | CDS | 4101246 | 4101481 | 4101246 | ID=cds.MS.gene24440.t1;Parent=MS.gene24440.t1 |
chr1.1 | exon | 4101618 | 4101758 | 4101618 | ID=MS.gene24440.t1.exon3;Parent=MS.gene24440.t1 |
chr1.1 | CDS | 4101618 | 4101758 | 4101618 | ID=cds.MS.gene24440.t1;Parent=MS.gene24440.t1 |
chr1.1 | exon | 4102380 | 4102832 | 4102380 | ID=MS.gene24440.t1.exon4;Parent=MS.gene24440.t1 |
chr1.1 | CDS | 4102380 | 4102832 | 4102380 | ID=cds.MS.gene24440.t1;Parent=MS.gene24440.t1 |
chr1.1 | exon | 4103730 | 4103825 | 4103730 | ID=MS.gene24440.t1.exon5;Parent=MS.gene24440.t1 |
chr1.1 | CDS | 4103730 | 4103825 | 4103730 | ID=cds.MS.gene24440.t1;Parent=MS.gene24440.t1 |
Gene Sequence |
Protein sequence |