Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25078.t1 | XP_003627374.1 | 95.8 | 236 | 7 | 2 | 1 | 234 | 1 | 235 | 4.10E-118 | 434.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25078.t1 | A9BNG6 | 47.0 | 83 | 40 | 1 | 10 | 92 | 5 | 83 | 6.8e-13 | 75.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25078.t1 | G7L8C9 | 95.8 | 236 | 7 | 2 | 1 | 234 | 1 | 235 | 3.0e-118 | 434.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051064 | MS.gene25078 | 0.998574 | 3.22E-269 | -1.69E-46 |
| MS.gene052176 | MS.gene25078 | 0.820881 | 5.43E-53 | -1.69E-46 |
| MS.gene052389 | MS.gene25078 | 0.830854 | 2.32E-55 | -1.69E-46 |
| MS.gene052586 | MS.gene25078 | 0.812521 | 4.07E-51 | -1.69E-46 |
| MS.gene055225 | MS.gene25078 | 0.818348 | 2.05E-52 | -1.69E-46 |
| MS.gene056087 | MS.gene25078 | 0.819153 | 1.35E-52 | -1.69E-46 |
| MS.gene058498 | MS.gene25078 | 0.865514 | 5.59E-65 | -1.69E-46 |
| MS.gene058500 | MS.gene25078 | 0.860668 | 1.76E-63 | -1.69E-46 |
| MS.gene058502 | MS.gene25078 | 0.801941 | 7.10E-49 | -1.69E-46 |
| MS.gene060879 | MS.gene25078 | 0.841264 | 5.28E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25078.t1 | MTR_8g022310 | 96.186 | 236 | 6 | 2 | 1 | 234 | 1 | 235 | 2.72e-165 | 456 |
| MS.gene25078.t1 | MTR_8g022310 | 87.037 | 216 | 20 | 1 | 1 | 216 | 1 | 208 | 1.01e-134 | 377 |
| MS.gene25078.t1 | MTR_8g022310 | 97.861 | 187 | 4 | 0 | 1 | 187 | 1 | 187 | 3.25e-134 | 375 |
| MS.gene25078.t1 | MTR_8g022310 | 97.861 | 187 | 4 | 0 | 1 | 187 | 1 | 187 | 7.40e-134 | 375 |
| MS.gene25078.t1 | MTR_8g022310 | 93.878 | 147 | 6 | 2 | 90 | 234 | 7 | 152 | 6.59e-86 | 251 |
| MS.gene25078.t1 | MTR_8g022310 | 96.429 | 112 | 4 | 0 | 76 | 187 | 1 | 112 | 2.95e-73 | 219 |
| MS.gene25078.t1 | MTR_7g112360 | 41.176 | 153 | 80 | 5 | 11 | 162 | 17 | 160 | 1.47e-30 | 111 |
| MS.gene25078.t1 | MTR_4g085070 | 44.094 | 127 | 64 | 4 | 16 | 138 | 18 | 141 | 8.58e-28 | 103 |
| MS.gene25078.t1 | MTR_7g112360 | 50.617 | 81 | 38 | 1 | 11 | 91 | 17 | 95 | 2.22e-23 | 91.3 |
| MS.gene25078.t1 | MTR_2g014480 | 45.122 | 82 | 38 | 2 | 10 | 91 | 4 | 78 | 2.10e-15 | 74.3 |
| MS.gene25078.t1 | MTR_7g101070 | 49.333 | 75 | 33 | 1 | 6 | 80 | 354 | 423 | 2.17e-15 | 75.1 |
| MS.gene25078.t1 | MTR_2g090705 | 49.275 | 69 | 30 | 1 | 10 | 78 | 4 | 67 | 4.84e-15 | 73.6 |
| MS.gene25078.t1 | MTR_4g109510 | 53.731 | 67 | 29 | 1 | 12 | 78 | 10 | 74 | 1.33e-14 | 72.8 |
| MS.gene25078.t1 | MTR_4g015840 | 46.377 | 69 | 32 | 1 | 10 | 78 | 4 | 67 | 5.22e-14 | 70.5 |
| MS.gene25078.t1 | MTR_2g014470 | 43.478 | 69 | 34 | 1 | 10 | 78 | 4 | 67 | 6.43e-14 | 70.1 |
| MS.gene25078.t1 | MTR_4g078850 | 43.478 | 69 | 34 | 1 | 10 | 78 | 4 | 67 | 1.01e-13 | 69.7 |
| MS.gene25078.t1 | MTR_2g436580 | 45.000 | 80 | 37 | 2 | 9 | 88 | 109 | 181 | 2.83e-13 | 67.4 |
| MS.gene25078.t1 | MTR_7g092380 | 37.736 | 106 | 56 | 3 | 4 | 105 | 16 | 115 | 3.32e-13 | 67.8 |
| MS.gene25078.t1 | MTR_5g065860 | 37.895 | 95 | 44 | 3 | 7 | 97 | 45 | 128 | 3.47e-13 | 65.1 |
| MS.gene25078.t1 | MTR_3g108020 | 43.478 | 69 | 34 | 1 | 10 | 78 | 4 | 67 | 4.37e-13 | 67.8 |
| MS.gene25078.t1 | MTR_7g109340 | 50.000 | 68 | 28 | 2 | 11 | 78 | 27 | 88 | 6.79e-12 | 64.3 |
| MS.gene25078.t1 | MTR_1g110310 | 41.026 | 78 | 40 | 1 | 9 | 86 | 15 | 86 | 7.26e-12 | 64.7 |
| MS.gene25078.t1 | MTR_5g012530 | 42.254 | 71 | 38 | 1 | 9 | 79 | 11 | 78 | 1.03e-11 | 64.3 |
| MS.gene25078.t1 | MTR_6g027110 | 47.143 | 70 | 34 | 2 | 10 | 78 | 2 | 69 | 1.07e-11 | 61.2 |
| MS.gene25078.t1 | MTR_1g052110 | 42.500 | 80 | 39 | 2 | 8 | 86 | 36 | 109 | 1.49e-11 | 63.2 |
| MS.gene25078.t1 | MTR_2g436560 | 41.250 | 80 | 40 | 2 | 1 | 80 | 95 | 167 | 4.45e-11 | 62.0 |
| MS.gene25078.t1 | MTR_6g026940 | 48.485 | 66 | 31 | 2 | 10 | 74 | 2 | 65 | 7.89e-11 | 59.7 |
| MS.gene25078.t1 | MTR_3g087030 | 44.928 | 69 | 31 | 1 | 10 | 78 | 82 | 143 | 8.62e-11 | 61.6 |
| MS.gene25078.t1 | MTR_6g027030 | 47.143 | 70 | 34 | 2 | 10 | 78 | 2 | 69 | 9.72e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25078.t1 | AT3G14200 | 51.082 | 231 | 89 | 9 | 10 | 231 | 12 | 227 | 5.08e-59 | 186 |
| MS.gene25078.t1 | AT1G72416 | 63.810 | 105 | 25 | 2 | 10 | 109 | 5 | 101 | 1.88e-40 | 137 |
| MS.gene25078.t1 | AT1G72416 | 65.049 | 103 | 23 | 2 | 10 | 107 | 5 | 99 | 2.52e-40 | 137 |
| MS.gene25078.t1 | AT1G72416 | 65.049 | 103 | 23 | 2 | 10 | 107 | 5 | 99 | 2.67e-40 | 137 |
| MS.gene25078.t1 | AT1G72416 | 65.049 | 103 | 23 | 2 | 10 | 107 | 5 | 99 | 6.97e-40 | 136 |
| MS.gene25078.t1 | AT1G56300 | 50.376 | 133 | 57 | 4 | 1 | 129 | 1 | 128 | 8.01e-33 | 117 |
| MS.gene25078.t1 | AT1G71000 | 48.611 | 144 | 58 | 6 | 4 | 139 | 2 | 137 | 8.15e-33 | 117 |
| MS.gene25078.t1 | AT1G71000 | 42.593 | 162 | 79 | 5 | 4 | 159 | 2 | 155 | 4.24e-28 | 105 |
| MS.gene25078.t1 | AT1G56300 | 51.818 | 110 | 47 | 3 | 1 | 106 | 1 | 108 | 8.12e-28 | 102 |
| MS.gene25078.t1 | AT1G72416 | 73.469 | 49 | 13 | 0 | 61 | 109 | 10 | 58 | 9.56e-19 | 80.5 |
| MS.gene25078.t1 | AT5G01390 | 49.275 | 69 | 30 | 1 | 10 | 78 | 4 | 67 | 3.54e-15 | 72.8 |
| MS.gene25078.t1 | AT5G01390 | 49.275 | 69 | 30 | 1 | 10 | 78 | 4 | 67 | 6.99e-15 | 72.4 |
| MS.gene25078.t1 | AT1G59725 | 46.377 | 69 | 33 | 1 | 10 | 78 | 4 | 68 | 9.24e-15 | 72.8 |
| MS.gene25078.t1 | AT5G01390 | 49.275 | 69 | 30 | 1 | 10 | 78 | 4 | 67 | 1.01e-14 | 72.4 |
| MS.gene25078.t1 | AT5G01390 | 49.275 | 69 | 30 | 1 | 10 | 78 | 4 | 67 | 2.05e-14 | 70.5 |
| MS.gene25078.t1 | AT5G49060 | 46.914 | 81 | 35 | 3 | 7 | 86 | 96 | 169 | 2.41e-14 | 71.6 |
| MS.gene25078.t1 | AT5G49060 | 46.914 | 81 | 35 | 3 | 7 | 86 | 96 | 169 | 2.41e-14 | 71.6 |
| MS.gene25078.t1 | AT5G03160 | 46.667 | 75 | 35 | 1 | 6 | 80 | 366 | 435 | 3.92e-14 | 71.2 |
| MS.gene25078.t1 | AT5G25530 | 44.928 | 69 | 33 | 1 | 10 | 78 | 4 | 67 | 4.96e-14 | 70.5 |
| MS.gene25078.t1 | AT4G28480 | 46.377 | 69 | 32 | 1 | 10 | 78 | 4 | 67 | 6.72e-14 | 69.7 |
| MS.gene25078.t1 | AT3G08910 | 46.377 | 69 | 32 | 1 | 10 | 78 | 4 | 67 | 8.97e-14 | 69.7 |
| MS.gene25078.t1 | AT4G28480 | 46.377 | 69 | 32 | 1 | 10 | 78 | 4 | 67 | 1.23e-13 | 69.7 |
| MS.gene25078.t1 | AT3G47940 | 42.857 | 70 | 36 | 1 | 10 | 79 | 4 | 69 | 1.93e-13 | 68.9 |
| MS.gene25078.t1 | AT2G35720 | 42.308 | 78 | 42 | 1 | 2 | 79 | 7 | 81 | 2.07e-13 | 69.3 |
| MS.gene25078.t1 | AT1G10350 | 42.029 | 69 | 35 | 1 | 10 | 78 | 4 | 67 | 3.04e-13 | 68.6 |
| MS.gene25078.t1 | AT5G16650 | 39.024 | 82 | 43 | 2 | 3 | 83 | 4 | 79 | 6.05e-13 | 64.3 |
| MS.gene25078.t1 | AT2G20560 | 44.928 | 69 | 33 | 1 | 10 | 78 | 4 | 67 | 7.09e-13 | 67.4 |
| MS.gene25078.t1 | AT5G16650 | 39.024 | 82 | 43 | 2 | 3 | 83 | 4 | 79 | 2.31e-12 | 63.5 |
| MS.gene25078.t1 | AT2G33735 | 50.704 | 71 | 25 | 2 | 10 | 78 | 22 | 84 | 2.83e-12 | 62.0 |
| MS.gene25078.t1 | AT2G33735 | 50.704 | 71 | 25 | 2 | 10 | 78 | 22 | 84 | 2.83e-12 | 62.0 |
| MS.gene25078.t1 | AT3G12170 | 38.793 | 116 | 61 | 4 | 1 | 113 | 1 | 109 | 3.34e-12 | 64.7 |
| MS.gene25078.t1 | AT3G12170 | 37.931 | 116 | 62 | 4 | 1 | 113 | 37 | 145 | 7.17e-12 | 64.3 |
| MS.gene25078.t1 | AT5G06910 | 37.705 | 122 | 59 | 5 | 1 | 116 | 19 | 129 | 9.77e-12 | 63.5 |
| MS.gene25078.t1 | AT5G25530 | 41.558 | 77 | 32 | 3 | 10 | 78 | 4 | 75 | 1.86e-11 | 63.2 |
| MS.gene25078.t1 | AT4G39960 | 39.785 | 93 | 43 | 3 | 9 | 97 | 84 | 167 | 2.83e-11 | 62.8 |
| MS.gene25078.t1 | AT4G39960 | 39.785 | 93 | 43 | 3 | 9 | 97 | 84 | 167 | 2.83e-11 | 62.8 |
| MS.gene25078.t1 | AT1G80030 | 42.254 | 71 | 34 | 1 | 8 | 78 | 73 | 136 | 4.49e-11 | 62.4 |
| MS.gene25078.t1 | AT1G80030 | 42.254 | 71 | 34 | 1 | 8 | 78 | 73 | 136 | 5.64e-11 | 62.0 |
| MS.gene25078.t1 | AT1G80030 | 42.254 | 71 | 34 | 1 | 8 | 78 | 73 | 136 | 5.64e-11 | 62.0 |
| MS.gene25078.t1 | AT1G80030 | 42.254 | 71 | 34 | 1 | 8 | 78 | 73 | 136 | 5.64e-11 | 62.0 |
| MS.gene25078.t1 | AT3G62600 | 48.529 | 68 | 29 | 2 | 11 | 78 | 27 | 88 | 7.97e-11 | 61.2 |
Find 44 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACAGAAGTTCTGGTAATT+TGG | 0.142853 | 8.4:-72120291 | None:intergenic |
| AATTCTACTCAGATGAATTA+TGG | 0.200136 | 8.4:+72120240 | MS.gene25078:CDS |
| GAAGATGTGGAGAAGGAAAA+AGG | 0.260664 | 8.4:+72121190 | MS.gene25078:CDS |
| CCTTCTCCACATCTTCTTGA+AGG | 0.267807 | 8.4:-72121183 | None:intergenic |
| CAATGATTTCTATGCAGTTT+TGG | 0.279803 | 8.4:+72117725 | MS.gene25078:CDS |
| CCAGATCGTTGTTCAGCTTC+AGG | 0.283002 | 8.4:+72118069 | MS.gene25078:CDS |
| AATTACCAGAACTTCTGTTT+TGG | 0.283009 | 8.4:+72120294 | MS.gene25078:CDS |
| GGCTCACATTTGATTTAGTT+TGG | 0.297419 | 8.4:-72119400 | None:intergenic |
| CAAGCGGATATCGGATTAAA+TGG | 0.298600 | 8.4:+72120135 | MS.gene25078:CDS |
| GCAGAGGATTCTTCTAGTTT+TGG | 0.305479 | 8.4:+72120267 | MS.gene25078:CDS |
| AGCACCTCTCTTAATGCTTC+GGG | 0.329574 | 8.4:+72120159 | MS.gene25078:CDS |
| TTATATGTGATACAGGAAAA+TGG | 0.333099 | 8.4:+72120066 | MS.gene25078:intron |
| GCAATTCAAGAAGCCTATTC+TGG | 0.348966 | 8.4:+72118132 | MS.gene25078:CDS |
| AGAAGCTAAGAAGAAATTTC+AGG | 0.357982 | 8.4:+72118110 | MS.gene25078:CDS |
| TCATCTACTTTCATGACTTT+CGG | 0.362653 | 8.4:+72120192 | MS.gene25078:CDS |
| AAGCACCTCTCTTAATGCTT+CGG | 0.391365 | 8.4:+72120158 | MS.gene25078:CDS |
| GATATGTTTCAAGCGGATAT+CGG | 0.410739 | 8.4:+72120126 | MS.gene25078:CDS |
| ATTCTACTCAGATGAATTAT+GGG | 0.423184 | 8.4:+72120241 | MS.gene25078:CDS |
| TGACCCCAAAACAGAAGTTC+TGG | 0.428777 | 8.4:-72120299 | None:intergenic |
| CAGATCGTTGTTCAGCTTCA+GGG | 0.447334 | 8.4:+72118070 | MS.gene25078:CDS |
| TGCATGTAAATTACCAGAAT+AGG | 0.452286 | 8.4:-72118145 | None:intergenic |
| AAATGGAGAGGAGAGCTTTG+AGG | 0.455188 | 8.4:+72120083 | MS.gene25078:CDS |
| CCTGAAGCTGAACAACGATC+TGG | 0.468892 | 8.4:-72118069 | None:intergenic |
| AATCCCAGGATGGTCATTAG+AGG | 0.480600 | 8.4:-72121290 | None:intergenic |
| GGGAGACTTTCTGAACGAAA+TGG | 0.482099 | 8.4:+72119364 | MS.gene25078:CDS |
| GGAAATAATATGGCTAATGA+AGG | 0.487826 | 8.4:+72117693 | None:intergenic |
| TCATGACTTTCGGTGAAAGC+GGG | 0.503824 | 8.4:+72120202 | MS.gene25078:CDS |
| AATGCTCTGATTCAGAACTA+AGG | 0.513112 | 8.4:+72117760 | MS.gene25078:CDS |
| TTCAGGGAATGTGAAGTTTG+TGG | 0.516942 | 8.4:+72118086 | MS.gene25078:CDS |
| GTTTCCTCTAATGACCATCC+TGG | 0.517095 | 8.4:+72121286 | MS.gene25078:CDS |
| TTTCCTCTAATGACCATCCT+GGG | 0.536902 | 8.4:+72121287 | MS.gene25078:CDS |
| AGTCATGAAAGTAGATGAAG+TGG | 0.538936 | 8.4:-72120187 | None:intergenic |
| TGCTTATAAGAAACTTGCAC+TGG | 0.543386 | 8.4:+72117785 | MS.gene25078:CDS |
| ATTTGATGATATGTTTCAAG+CGG | 0.571158 | 8.4:+72120119 | MS.gene25078:CDS |
| TTCATGACTTTCGGTGAAAG+CGG | 0.579461 | 8.4:+72120201 | MS.gene25078:CDS |
| CCTTCAAGAAGATGTGGAGA+AGG | 0.586502 | 8.4:+72121183 | MS.gene25078:CDS |
| GAAGCACCTTCAAGAAGATG+TGG | 0.593810 | 8.4:+72121177 | MS.gene25078:intron |
| GATGAATTATGGGAAGGCAG+AGG | 0.603296 | 8.4:+72120251 | MS.gene25078:CDS |
| TACTCAGATGAATTATGGGA+AGG | 0.609702 | 8.4:+72120245 | MS.gene25078:CDS |
| TATCAATTAGCAGAAATCCC+AGG | 0.616344 | 8.4:-72121304 | None:intergenic |
| TGTGATACAGGAAAATGGAG+AGG | 0.651222 | 8.4:+72120071 | MS.gene25078:intron |
| AAGAGATTAATGTACGACGT+TGG | 0.670458 | 8.4:+72118312 | MS.gene25078:CDS |
| AATTAGCAGAAATCCCAGGA+TGG | 0.683865 | 8.4:-72121300 | None:intergenic |
| GCAACCCGAAGCATTAAGAG+AGG | 0.689028 | 8.4:-72120163 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTGCAAAAATATTAAAT+AGG | - | chr8.4:72119425-72119444 | None:intergenic | 10.0% |
| !! | TATTGCAAAAATATTAAATA+GGG | - | chr8.4:72119424-72119443 | None:intergenic | 10.0% |
| !! | TATTTAAAAAATAATTCAAG+TGG | + | chr8.4:72119759-72119778 | MS.gene25078:intron | 10.0% |
| !! | TTGATTATATGAAAAAAAAT+CGG | - | chr8.4:72118954-72118973 | None:intergenic | 10.0% |
| !!! | TTTATATATTTTTTGTTTAG+TGG | + | chr8.4:72119521-72119540 | MS.gene25078:intron | 10.0% |
| !! | AACTTGAATTAATCAATTTA+TGG | - | chr8.4:72119953-72119972 | None:intergenic | 15.0% |
| !! | ACAAATAATAATTTGAATCA+TGG | - | chr8.4:72118228-72118247 | None:intergenic | 15.0% |
| !! | AGGAAAATAATTTGATTAAA+TGG | + | chr8.4:72118033-72118052 | MS.gene25078:intron | 15.0% |
| !! | TGATTATATGAAAAAAAATC+GGG | - | chr8.4:72118953-72118972 | None:intergenic | 15.0% |
| !!! | AACAAGATATTATTTTATTG+TGG | + | chr8.4:72119800-72119819 | MS.gene25078:intron | 15.0% |
| !!! | CTTTAAATTATACAAGATTT+TGG | + | chr8.4:72120521-72120540 | MS.gene25078:intron | 15.0% |
| !!! | TGAATAAACTTTAGAAAAAA+CGG | - | chr8.4:72117883-72117902 | None:intergenic | 15.0% |
| !!! | TTCTCAATCTATTTTTTAAA+CGG | - | chr8.4:72118660-72118679 | None:intergenic | 15.0% |
| !! | AAAGTGAAAAGGTAAAATTA+AGG | - | chr8.4:72118487-72118506 | None:intergenic | 20.0% |
| !! | AACAAGACATAAACATTATT+AGG | - | chr8.4:72119623-72119642 | None:intergenic | 20.0% |
| !! | AACGAAAACAAGAAAAAAAA+TGG | + | chr8.4:72118741-72118760 | MS.gene25078:intron | 20.0% |
| !! | AATGAATTGAAAGAGTTAAA+AGG | - | chr8.4:72120018-72120037 | None:intergenic | 20.0% |
| !! | ACCAAGAATAAAAAAAATGT+TGG | - | chr8.4:72121155-72121174 | None:intergenic | 20.0% |
| !! | ACTCTATTAATAACTCAAAA+TGG | - | chr8.4:72120996-72121015 | None:intergenic | 20.0% |
| !! | ATGAATATTGAAACTGAATT+AGG | + | chr8.4:72118540-72118559 | MS.gene25078:intron | 20.0% |
| !! | ATTCAGTTTCAATATTCATT+AGG | - | chr8.4:72118539-72118558 | None:intergenic | 20.0% |
| !! | ATTTGAAAATAATTGTTGGA+AGG | + | chr8.4:72119838-72119857 | MS.gene25078:intron | 20.0% |
| !! | CAAGATTTGAAAATAATTGT+TGG | + | chr8.4:72119834-72119853 | MS.gene25078:intron | 20.0% |
| !! | GATTAATTTATATGTGATAC+AGG | + | chr8.4:72120059-72120078 | MS.gene25078:intron | 20.0% |
| !! | TATCTTTCTTTCACAAATTT+AGG | - | chr8.4:72117963-72117982 | None:intergenic | 20.0% |
| !! | TGAATATTGAAACTGAATTA+GGG | + | chr8.4:72118541-72118560 | MS.gene25078:intron | 20.0% |
| !! | TTAACATGTAATTGAGTTAT+GGG | + | chr8.4:72120493-72120512 | MS.gene25078:intron | 20.0% |
| !! | TTATAGCACATCAAAATTAT+TGG | - | chr8.4:72119312-72119331 | None:intergenic | 20.0% |
| !! | TTTAACATGTAATTGAGTTA+TGG | + | chr8.4:72120492-72120511 | MS.gene25078:intron | 20.0% |
| !! | TTTGTATCAAATTCTCAAAT+TGG | - | chr8.4:72121025-72121044 | None:intergenic | 20.0% |
| !!! | AAAATGAATTTTGTTTTGCA+GGG | + | chr8.4:72119338-72119357 | MS.gene25078:intron | 20.0% |
| !!! | AATAATGTTTATGTCTTGTT+TGG | + | chr8.4:72119623-72119642 | MS.gene25078:intron | 20.0% |
| !!! | AATGTAAATGGTGTTTTTTT+TGG | + | chr8.4:72118267-72118286 | MS.gene25078:intron | 20.0% |
| !!! | AGTTAAAAGGATTGAAATTT+TGG | - | chr8.4:72120005-72120024 | None:intergenic | 20.0% |
| !!! | ATGATAGAAGATTTAGAATT+TGG | + | chr8.4:72120554-72120573 | MS.gene25078:intron | 20.0% |
| !!! | ATGTAAATGGTGTTTTTTTT+GGG | + | chr8.4:72118268-72118287 | MS.gene25078:intron | 20.0% |
| !!! | GTTTAAAATAGTGACTTAAT+TGG | - | chr8.4:72118831-72118850 | None:intergenic | 20.0% |
| !!! | TCCAACATTTTTTTTATTCT+TGG | + | chr8.4:72121151-72121170 | MS.gene25078:intron | 20.0% |
| !!! | TGCAATTTTTTTAAGAAGAT+TGG | + | chr8.4:72121103-72121122 | MS.gene25078:intron | 20.0% |
| !!! | TGGAAATGAGTTAATTTTTT+AGG | + | chr8.4:72118761-72118780 | MS.gene25078:intron | 20.0% |
| !!! | TTTCTAAAGTTTATTCACAT+GGG | + | chr8.4:72117886-72117905 | MS.gene25078:intron | 20.0% |
| !!! | TTTGTGAAAGAAAGATATTT+TGG | + | chr8.4:72117966-72117985 | MS.gene25078:intron | 20.0% |
| !!! | TTTTCTAAAGTTTATTCACA+TGG | + | chr8.4:72117885-72117904 | MS.gene25078:intron | 20.0% |
| ! | AAAAAGAGATATGTTCTTCA+AGG | + | chr8.4:72119085-72119104 | MS.gene25078:intron | 25.0% |
| ! | AAAGTTGGAATTGTTTAGAA+AGG | + | chr8.4:72118013-72118032 | MS.gene25078:intron | 25.0% |
| ! | AACAATGATATGGTCAATTT+CGG | + | chr8.4:72118715-72118734 | MS.gene25078:intron | 25.0% |
| ! | AAGAGGAGAAGAAAAATAAT+TGG | - | chr8.4:72119057-72119076 | None:intergenic | 25.0% |
| ! | AATTCTACTCAGATGAATTA+TGG | + | chr8.4:72120240-72120259 | MS.gene25078:CDS | 25.0% |
| ! | AGAAAACAAAAAATCTCATG+TGG | + | chr8.4:72121256-72121275 | MS.gene25078:CDS | 25.0% |
| ! | AGTAGTAACAACAAAAAGAT+AGG | + | chr8.4:72120469-72120488 | MS.gene25078:intron | 25.0% |
| ! | ATTATCATTACCAATGAATG+AGG | + | chr8.4:72120849-72120868 | MS.gene25078:intron | 25.0% |
| ! | ATTCATGGAATTGAATCAAA+TGG | + | chr8.4:72119271-72119290 | MS.gene25078:intron | 25.0% |
| ! | ATTCTACTCAGATGAATTAT+GGG | + | chr8.4:72120241-72120260 | MS.gene25078:CDS | 25.0% |
| ! | CACTAATTAAAAGACTCATT+GGG | - | chr8.4:72120787-72120806 | None:intergenic | 25.0% |
| ! | CATAACACAAAAATAGAAGT+AGG | - | chr8.4:72118422-72118441 | None:intergenic | 25.0% |
| ! | GATTCAATTCCATGAATTAT+TGG | - | chr8.4:72119268-72119287 | None:intergenic | 25.0% |
| ! | TAACATGTAATTGAGTTATG+GGG | + | chr8.4:72120494-72120513 | MS.gene25078:intron | 25.0% |
| ! | TAATCTATCTTCAGAGTAAT+TGG | - | chr8.4:72120722-72120741 | None:intergenic | 25.0% |
| ! | TGTTTCTTCATTTACTTGAA+GGG | + | chr8.4:72118445-72118464 | MS.gene25078:intron | 25.0% |
| ! | TTAAGTGGTTAAGGAAAAAA+TGG | + | chr8.4:72120739-72120758 | MS.gene25078:intron | 25.0% |
| ! | TTACAAAACTAATAGAGTCA+GGG | + | chr8.4:72120937-72120956 | MS.gene25078:intron | 25.0% |
| ! | TTATATGTGATACAGGAAAA+TGG | + | chr8.4:72120066-72120085 | MS.gene25078:intron | 25.0% |
| ! | TTGAATGATTGTTTATTGTG+AGG | + | chr8.4:72120417-72120436 | MS.gene25078:intron | 25.0% |
| ! | TTGTTAATGTGAAAGTGAAA+AGG | - | chr8.4:72118498-72118517 | None:intergenic | 25.0% |
| ! | TTTGATTAAATGGACAGAAA+TGG | + | chr8.4:72118043-72118062 | MS.gene25078:intron | 25.0% |
| !! | AATCAATTTATGGAAAGTAC+AGG | - | chr8.4:72119943-72119962 | None:intergenic | 25.0% |
| !! | AATGATTTCTATGCAGTTTT+GGG | + | chr8.4:72117726-72117745 | MS.gene25078:CDS | 25.0% |
| !! | ATAAACTTTAGAAAAAACGG+TGG | - | chr8.4:72117880-72117899 | None:intergenic | 25.0% |
| !! | ATTGTTGTTATGATGAAAGT+TGG | + | chr8.4:72117998-72118017 | MS.gene25078:intron | 25.0% |
| !! | ATTTGATGATATGTTTCAAG+CGG | + | chr8.4:72120119-72120138 | MS.gene25078:CDS | 25.0% |
| !! | CACTTTCACATTAACAATTT+TGG | + | chr8.4:72118501-72118520 | MS.gene25078:intron | 25.0% |
| !! | TATAAGGATGATTTGATAGT+TGG | + | chr8.4:72118565-72118584 | MS.gene25078:intron | 25.0% |
| !! | TATTGGGTCTAAAATGTAAA+TGG | + | chr8.4:72118255-72118274 | MS.gene25078:intron | 25.0% |
| !! | TTGTTTCTTCATTTACTTGA+AGG | + | chr8.4:72118444-72118463 | MS.gene25078:intron | 25.0% |
| !!! | AACATTTTTTTTTCCTCCTT+TGG | - | chr8.4:72119148-72119167 | None:intergenic | 25.0% |
| !!! | ACATTTTTTTTTCCTCCTTT+GGG | - | chr8.4:72119147-72119166 | None:intergenic | 25.0% |
| !!! | AGTCACTATTTTAAACCTAA+AGG | + | chr8.4:72118835-72118854 | MS.gene25078:intron | 25.0% |
| !!! | GAAAATGAATTTTGTTTTGC+AGG | + | chr8.4:72119337-72119356 | MS.gene25078:intron | 25.0% |
| !!! | TTTTGTTGTTCATGTTATCA+AGG | + | chr8.4:72120814-72120833 | MS.gene25078:intron | 25.0% |
| !!! | TTTTGTTTGCTTGTAATTAG+TGG | + | chr8.4:72119452-72119471 | MS.gene25078:intron | 25.0% |
| AAAGACAGAGAGTAATTTGA+TGG | + | chr8.4:72121042-72121061 | MS.gene25078:intron | 30.0% | |
| AGAAGCTAAGAAGAAATTTC+AGG | + | chr8.4:72118110-72118129 | MS.gene25078:CDS | 30.0% | |
| ATAACAATTCATGCTTCAGA+TGG | - | chr8.4:72120681-72120700 | None:intergenic | 30.0% | |
| ATAATTTGAATCATGGCTCA+TGG | - | chr8.4:72118221-72118240 | None:intergenic | 30.0% | |
| ATATGTTCTTCAAGGTTAGT+AGG | + | chr8.4:72119093-72119112 | MS.gene25078:intron | 30.0% | |
| ATGAATGTTGCATCAAATGA+AGG | - | chr8.4:72120355-72120374 | None:intergenic | 30.0% | |
| CAATAAGAGCCAATAATTCA+TGG | + | chr8.4:72119256-72119275 | MS.gene25078:intron | 30.0% | |
| CACTCCATATATTATATAGC+TGG | + | chr8.4:72121067-72121086 | MS.gene25078:intron | 30.0% | |
| CCACTAATTAAAAGACTCAT+TGG | - | chr8.4:72120788-72120807 | None:intergenic | 30.0% | |
| CTTACAAAACTAATAGAGTC+AGG | + | chr8.4:72120936-72120955 | MS.gene25078:intron | 30.0% | |
| GAAACTGAATTAGGGATATA+AGG | + | chr8.4:72118549-72118568 | MS.gene25078:intron | 30.0% | |
| GAAGATAGATTAAGTGGTTA+AGG | + | chr8.4:72120730-72120749 | MS.gene25078:intron | 30.0% | |
| GAGACCAGCTATATAATATA+TGG | - | chr8.4:72121074-72121093 | None:intergenic | 30.0% | |
| GGAGAAGAAAAATAATTGGA+CGG | - | chr8.4:72119053-72119072 | None:intergenic | 30.0% | |
| GTTTCAATATTCATTAGGCA+TGG | - | chr8.4:72118534-72118553 | None:intergenic | 30.0% | |
| TAATTGTTGGAAGGATAAAG+TGG | + | chr8.4:72119847-72119866 | MS.gene25078:intron | 30.0% | |
| TAATTTGAATCATGGCTCAT+GGG | - | chr8.4:72118220-72118239 | None:intergenic | 30.0% | |
| TCATCTACTTTCATGACTTT+CGG | + | chr8.4:72120192-72120211 | MS.gene25078:CDS | 30.0% | |
| TGAATGAGGATACAAAACAA+TGG | + | chr8.4:72120863-72120882 | MS.gene25078:intron | 30.0% | |
| TGCATGTAAATTACCAGAAT+AGG | - | chr8.4:72118148-72118167 | None:intergenic | 30.0% | |
| TTCATTTGATGCAACATTCA+TGG | + | chr8.4:72120354-72120373 | MS.gene25078:intron | 30.0% | |
| TTTGGGAAAAGACATTTGTT+GGG | - | chr8.4:72119130-72119149 | None:intergenic | 30.0% | |
| ! | AAACAGAAGTTCTGGTAATT+TGG | - | chr8.4:72120294-72120313 | None:intergenic | 30.0% |
| ! | AATTACCAGAACTTCTGTTT+TGG | + | chr8.4:72120294-72120313 | MS.gene25078:CDS | 30.0% |
| ! | ATTACCAGAACTTCTGTTTT+GGG | + | chr8.4:72120295-72120314 | MS.gene25078:CDS | 30.0% |
| ! | CAATGATTTCTATGCAGTTT+TGG | + | chr8.4:72117725-72117744 | MS.gene25078:CDS | 30.0% |
| ! | TACTCTGAAGATAGATTAAG+TGG | + | chr8.4:72120724-72120743 | MS.gene25078:intron | 30.0% |
| ! | TGTTTTGTATCCTCATTCAT+TGG | - | chr8.4:72120862-72120881 | None:intergenic | 30.0% |
| !! | CCAATGAGTCTTTTAATTAG+TGG | + | chr8.4:72120785-72120804 | MS.gene25078:intron | 30.0% |
| !!! | AATTTTGTTTTGCAGGGTAT+GGG | + | chr8.4:72119344-72119363 | MS.gene25078:intron | 30.0% |
| !!! | CTGACTCTATTAGTTTTGTA+AGG | - | chr8.4:72120938-72120957 | None:intergenic | 30.0% |
| AAGAGATTAATGTACGACGT+TGG | + | chr8.4:72118312-72118331 | MS.gene25078:CDS | 35.0% | |
| AAGATGTGGAGAAGGAAAAA+GGG | + | chr8.4:72121191-72121210 | MS.gene25078:CDS | 35.0% | |
| AATGCTCTGATTCAGAACTA+AGG | + | chr8.4:72117760-72117779 | MS.gene25078:CDS | 35.0% | |
| AATTAGTGGAACGTTAGGTT+AGG | + | chr8.4:72119466-72119485 | MS.gene25078:intron | 35.0% | |
| ACAAAACAATGGAGTATGTG+TGG | + | chr8.4:72120874-72120893 | MS.gene25078:intron | 35.0% | |
| ACACCAACTTTCATAGCAAT+TGG | - | chr8.4:72119650-72119669 | None:intergenic | 35.0% | |
| AGGCACAACTACATAGTATT+AGG | - | chr8.4:72119579-72119598 | None:intergenic | 35.0% | |
| AGTCATGAAAGTAGATGAAG+TGG | - | chr8.4:72120190-72120209 | None:intergenic | 35.0% | |
| ATGTGTGGAGTATATAGAAG+TGG | + | chr8.4:72120889-72120908 | MS.gene25078:intron | 35.0% | |
| ATTTCACACCATTCATGAGT+TGG | + | chr8.4:72118374-72118393 | MS.gene25078:intron | 35.0% | |
| CATGGAATTGAATCAAATGG+AGG | + | chr8.4:72119274-72119293 | MS.gene25078:intron | 35.0% | |
| CTTGTAATTAGTGGAACGTT+AGG | + | chr8.4:72119461-72119480 | MS.gene25078:intron | 35.0% | |
| GATATGTTTCAAGCGGATAT+CGG | + | chr8.4:72120126-72120145 | MS.gene25078:CDS | 35.0% | |
| GGCAAACATATAGCATAGTA+AGG | + | chr8.4:72120375-72120394 | MS.gene25078:intron | 35.0% | |
| GGTAGCAAAAAACAAGGAAA+TGG | + | chr8.4:72121232-72121251 | MS.gene25078:CDS | 35.0% | |
| GGTTAGAGTAGAAACAAAGA+CGG | - | chr8.4:72117852-72117871 | None:intergenic | 35.0% | |
| TACTCAGATGAATTATGGGA+AGG | + | chr8.4:72120245-72120264 | MS.gene25078:CDS | 35.0% | |
| TATCTTCAGAGTAATTGGCA+AGG | - | chr8.4:72120717-72120736 | None:intergenic | 35.0% | |
| TATGTGTCACATAACACATG+TGG | + | chr8.4:72119208-72119227 | MS.gene25078:intron | 35.0% | |
| TCACTGTCTTCTTTACCTTT+AGG | - | chr8.4:72118853-72118872 | None:intergenic | 35.0% | |
| TGAGAATGAATTTCCTCTCT+TGG | + | chr8.4:72118674-72118693 | MS.gene25078:intron | 35.0% | |
| TGCTTATAAGAAACTTGCAC+TGG | + | chr8.4:72117785-72117804 | MS.gene25078:CDS | 35.0% | |
| TGTTACTACTTACTACCCAT+AGG | - | chr8.4:72120459-72120478 | None:intergenic | 35.0% | |
| TTAAAGATCAGAGTGATGAG+CGG | + | chr8.4:72118596-72118615 | MS.gene25078:intron | 35.0% | |
| TTGACCATATCATTGTTTCG+TGG | - | chr8.4:72118712-72118731 | None:intergenic | 35.0% | |
| TTGTCAAACGTTTCTCAGAT+TGG | - | chr8.4:72120964-72120983 | None:intergenic | 35.0% | |
| TTTCACACCATTCATGAGTT+GGG | + | chr8.4:72118375-72118394 | MS.gene25078:intron | 35.0% | |
| ! | AACTTTAGAAAAAACGGTGG+AGG | - | chr8.4:72117877-72117896 | None:intergenic | 35.0% |
| ! | AAGGATGATTTGATAGTTGG+TGG | + | chr8.4:72118568-72118587 | MS.gene25078:intron | 35.0% |
| ! | ACTTTAGAAAAAACGGTGGA+GGG | - | chr8.4:72117876-72117895 | None:intergenic | 35.0% |
| ! | AGGATGATTTGATAGTTGGT+GGG | + | chr8.4:72118569-72118588 | MS.gene25078:intron | 35.0% |
| ! | AGTTGTGCCTTTTTACCTTT+TGG | + | chr8.4:72119589-72119608 | MS.gene25078:intron | 35.0% |
| ! | CAACAAATGTCTTTTCCCAA+AGG | + | chr8.4:72119129-72119148 | MS.gene25078:intron | 35.0% |
| ! | CTTTGGGAAAAGACATTTGT+TGG | - | chr8.4:72119131-72119150 | None:intergenic | 35.0% |
| ! | GGCTCACATTTGATTTAGTT+TGG | - | chr8.4:72119403-72119422 | None:intergenic | 35.0% |
| ! | GTTGTGCCTTTTTACCTTTT+GGG | + | chr8.4:72119590-72119609 | MS.gene25078:intron | 35.0% |
| ! | TTACCAGAACTTCTGTTTTG+GGG | + | chr8.4:72120296-72120315 | MS.gene25078:CDS | 35.0% |
| ! | TTGGGAAAAGACATTTGTTG+GGG | - | chr8.4:72119129-72119148 | None:intergenic | 35.0% |
| !! | AATTGCTATGAAAGTTGGTG+TGG | + | chr8.4:72119649-72119668 | MS.gene25078:intron | 35.0% |
| !! | AGTTTTGTAAGGAGATCACT+AGG | - | chr8.4:72120927-72120946 | None:intergenic | 35.0% |
| !!! | CCTTTTTACCTTTTGGGATT+GGG | + | chr8.4:72119596-72119615 | MS.gene25078:intron | 35.0% |
| !!! | GAATTTTGTTTTGCAGGGTA+TGG | + | chr8.4:72119343-72119362 | MS.gene25078:intron | 35.0% |
| !!! | TCTCTTTTTTCACGTGAAAG+AGG | - | chr8.4:72119074-72119093 | None:intergenic | 35.0% |
| !!! | TGCAGTTTTGGGATTGAATA+AGG | + | chr8.4:72117737-72117756 | MS.gene25078:CDS | 35.0% |
| AAGCACCTCTCTTAATGCTT+CGG | + | chr8.4:72120158-72120177 | MS.gene25078:CDS | 40.0% | |
| AATTAGCAGAAATCCCAGGA+TGG | - | chr8.4:72121303-72121322 | None:intergenic | 40.0% | |
| AGATGTGGAGAAGGAAAAAG+GGG | + | chr8.4:72121192-72121211 | MS.gene25078:CDS | 40.0% | |
| AGGCAAGTGAAAGAGAAAGA+GGG | - | chr8.4:72118402-72118421 | None:intergenic | 40.0% | |
| ATAAAGTGGTTTACTGGACC+GGG | + | chr8.4:72119861-72119880 | MS.gene25078:intron | 40.0% | |
| CAAGCGGATATCGGATTAAA+TGG | + | chr8.4:72120135-72120154 | MS.gene25078:CDS | 40.0% | |
| CCCAATCCCAAAAGGTAAAA+AGG | - | chr8.4:72119599-72119618 | None:intergenic | 40.0% | |
| CCTTTACTTGTTTGGCCTAT+GGG | + | chr8.4:72120441-72120460 | MS.gene25078:intron | 40.0% | |
| GAAAAAGGGGGAATTCTAGA+AGG | + | chr8.4:72121205-72121224 | MS.gene25078:CDS | 40.0% | |
| GAAGATGTGGAGAAGGAAAA+AGG | + | chr8.4:72121190-72121209 | MS.gene25078:CDS | 40.0% | |
| GAAGCAAATATGACCAAGAG+AGG | - | chr8.4:72118690-72118709 | None:intergenic | 40.0% | |
| GATAAAGTGGTTTACTGGAC+CGG | + | chr8.4:72119860-72119879 | MS.gene25078:intron | 40.0% | |
| GATGCAACTATTGTAGTCGT+TGG | + | chr8.4:72120598-72120617 | MS.gene25078:intron | 40.0% | |
| GCAATTCAAGAAGCCTATTC+TGG | + | chr8.4:72118132-72118151 | MS.gene25078:CDS | 40.0% | |
| GCTTCCACGAAACAATGATA+TGG | + | chr8.4:72118705-72118724 | MS.gene25078:intron | 40.0% | |
| GGAAGGATAAAGTGGTTTAC+TGG | + | chr8.4:72119855-72119874 | MS.gene25078:intron | 40.0% | |
| GGTCCAATTGCTATGAAAGT+TGG | + | chr8.4:72119644-72119663 | MS.gene25078:intron | 40.0% | |
| TAAAGATCAGAGTGATGAGC+GGG | + | chr8.4:72118597-72118616 | MS.gene25078:intron | 40.0% | |
| TAGGCAAGTGAAAGAGAAAG+AGG | - | chr8.4:72118403-72118422 | None:intergenic | 40.0% | |
| TATTAGGACCCAATCCCAAA+AGG | - | chr8.4:72119607-72119626 | None:intergenic | 40.0% | |
| TCCTTTACTTGTTTGGCCTA+TGG | + | chr8.4:72120440-72120459 | MS.gene25078:intron | 40.0% | |
| TGCAACGAATGCACATTTGT+TGG | - | chr8.4:72120635-72120654 | None:intergenic | 40.0% | |
| TGTGAGGTCCTTTACTTGTT+TGG | + | chr8.4:72120433-72120452 | MS.gene25078:intron | 40.0% | |
| TGTGATACAGGAAAATGGAG+AGG | + | chr8.4:72120071-72120090 | MS.gene25078:intron | 40.0% | |
| TTCAGGGAATGTGAAGTTTG+TGG | + | chr8.4:72118086-72118105 | MS.gene25078:CDS | 40.0% | |
| TTCATGACTTTCGGTGAAAG+CGG | + | chr8.4:72120201-72120220 | MS.gene25078:CDS | 40.0% | |
| TTTCCTCTAATGACCATCCT+GGG | + | chr8.4:72121287-72121306 | MS.gene25078:CDS | 40.0% | |
| ! | AATGCACATTTGTTGGATCC+TGG | - | chr8.4:72120628-72120647 | None:intergenic | 40.0% |
| ! | CAAATGTCTTTTCCCAAAGG+AGG | + | chr8.4:72119132-72119151 | MS.gene25078:intron | 40.0% |
| ! | GGATGATTTGATAGTTGGTG+GGG | + | chr8.4:72118570-72118589 | MS.gene25078:intron | 40.0% |
| !!! | GCAGAGGATTCTTCTAGTTT+TGG | + | chr8.4:72120267-72120286 | MS.gene25078:CDS | 40.0% |
| !!! | GCCTTTTTACCTTTTGGGAT+TGG | + | chr8.4:72119595-72119614 | MS.gene25078:intron | 40.0% |
| AAATGGAGAGGAGAGCTTTG+AGG | + | chr8.4:72120083-72120102 | MS.gene25078:CDS | 45.0% | |
| AATCCCAGGATGGTCATTAG+AGG | - | chr8.4:72121293-72121312 | None:intergenic | 45.0% | |
| AGCACCTCTCTTAATGCTTC+GGG | + | chr8.4:72120159-72120178 | MS.gene25078:CDS | 45.0% | |
| CAGATCGTTGTTCAGCTTCA+GGG | + | chr8.4:72118070-72118089 | MS.gene25078:CDS | 45.0% | |
| CCCATAGGCCAAACAAGTAA+AGG | - | chr8.4:72120444-72120463 | None:intergenic | 45.0% | |
| CCTTCAAGAAGATGTGGAGA+AGG | + | chr8.4:72121183-72121202 | MS.gene25078:CDS | 45.0% | |
| CCTTCTCCACATCTTCTTGA+AGG | - | chr8.4:72121186-72121205 | None:intergenic | 45.0% | |
| GATGAATTATGGGAAGGCAG+AGG | + | chr8.4:72120251-72120270 | MS.gene25078:CDS | 45.0% | |
| GATGTGGAGAAGGAAAAAGG+GGG | + | chr8.4:72121193-72121212 | MS.gene25078:CDS | 45.0% | |
| GGAGGAGGTAGCAAAAAACA+AGG | + | chr8.4:72121226-72121245 | MS.gene25078:CDS | 45.0% | |
| GGGAGACTTTCTGAACGAAA+TGG | + | chr8.4:72119364-72119383 | MS.gene25078:CDS | 45.0% | |
| GTTTCCTCTAATGACCATCC+TGG | + | chr8.4:72121286-72121305 | MS.gene25078:CDS | 45.0% | |
| TATTGTACGAACACACAGCC+CGG | - | chr8.4:72119882-72119901 | None:intergenic | 45.0% | |
| TCACATAACACATGTGGCAG+TGG | + | chr8.4:72119214-72119233 | MS.gene25078:intron | 45.0% | |
| TCATGACTTTCGGTGAAAGC+GGG | + | chr8.4:72120202-72120221 | MS.gene25078:CDS | 45.0% | |
| TGACCCCAAAACAGAAGTTC+TGG | - | chr8.4:72120302-72120321 | None:intergenic | 45.0% | |
| TTAGAAAAAACGGTGGAGGG+TGG | - | chr8.4:72117873-72117892 | None:intergenic | 45.0% | |
| ! | AAAGGGGGAATTCTAGAAGG+AGG | + | chr8.4:72121208-72121227 | MS.gene25078:CDS | 45.0% |
| ! | GAAGCACCTTCAAGAAGATG+TGG | + | chr8.4:72121177-72121196 | MS.gene25078:intron | 45.0% |
| ! | TGTGGTGGGGGTATATTGTT+GGG | + | chr8.4:72119667-72119686 | MS.gene25078:intron | 45.0% |
| !! | CTATGAAAGTTGGTGTGGTG+GGG | + | chr8.4:72119654-72119673 | MS.gene25078:intron | 45.0% |
| !! | GCTATGAAAGTTGGTGTGGT+GGG | + | chr8.4:72119653-72119672 | MS.gene25078:intron | 45.0% |
| !! | TATGAAAGTTGGTGTGGTGG+GGG | + | chr8.4:72119655-72119674 | MS.gene25078:intron | 45.0% |
| !! | TGCTATGAAAGTTGGTGTGG+TGG | + | chr8.4:72119652-72119671 | MS.gene25078:intron | 45.0% |
| !!! | AAATTATATATTTTTTTTCA+TGG | + | chr8.4:72117917-72117936 | MS.gene25078:intron | 5.0% |
| !!! | ATTATTTGTTTTTATATATT+GGG | + | chr8.4:72118239-72118258 | MS.gene25078:intron | 5.0% |
| !!! | TATTATTTGTTTTTATATAT+TGG | + | chr8.4:72118238-72118257 | MS.gene25078:intron | 5.0% |
| AGAGGGTCCCAACTCATGAA+TGG | - | chr8.4:72118385-72118404 | None:intergenic | 50.0% | |
| ATCCTCGACAACAGCAACAC+TGG | - | chr8.4:72120658-72120677 | None:intergenic | 50.0% | |
| ATTGTAGTCGTTGGATCGCC+AGG | + | chr8.4:72120607-72120626 | MS.gene25078:intron | 50.0% | |
| CCAGATCGTTGTTCAGCTTC+AGG | + | chr8.4:72118069-72118088 | MS.gene25078:CDS | 50.0% | |
| CCTGAAGCTGAACAACGATC+TGG | - | chr8.4:72118072-72118091 | None:intergenic | 50.0% | |
| ! | GCAACCCGAAGCATTAAGAG+AGG | - | chr8.4:72120166-72120185 | None:intergenic | 50.0% |
| ! | GTGGTGGGGGTATATTGTTG+GGG | + | chr8.4:72119668-72119687 | MS.gene25078:intron | 50.0% |
| ! | GTGTGGTGGGGGTATATTGT+TGG | + | chr8.4:72119666-72119685 | MS.gene25078:intron | 50.0% |
| ! | CACCAGTGTTGCTGTTGTCG+AGG | + | chr8.4:72120653-72120672 | MS.gene25078:intron | 55.0% |
| ! | GGGGGAATTCTAGAAGGAGG+AGG | + | chr8.4:72121211-72121230 | MS.gene25078:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 72117702 | 72121324 | 72117702 | ID=MS.gene25078 |
| chr8.4 | mRNA | 72117702 | 72121324 | 72117702 | ID=MS.gene25078.t1;Parent=MS.gene25078 |
| chr8.4 | exon | 72117702 | 72117806 | 72117702 | ID=MS.gene25078.t1.exon1;Parent=MS.gene25078.t1 |
| chr8.4 | CDS | 72117702 | 72117806 | 72117702 | ID=cds.MS.gene25078.t1;Parent=MS.gene25078.t1 |
| chr8.4 | exon | 72118060 | 72118153 | 72118060 | ID=MS.gene25078.t1.exon2;Parent=MS.gene25078.t1 |
| chr8.4 | CDS | 72118060 | 72118153 | 72118060 | ID=cds.MS.gene25078.t1;Parent=MS.gene25078.t1 |
| chr8.4 | exon | 72118295 | 72118362 | 72118295 | ID=MS.gene25078.t1.exon3;Parent=MS.gene25078.t1 |
| chr8.4 | CDS | 72118295 | 72118362 | 72118295 | ID=cds.MS.gene25078.t1;Parent=MS.gene25078.t1 |
| chr8.4 | exon | 72119359 | 72119415 | 72119359 | ID=MS.gene25078.t1.exon4;Parent=MS.gene25078.t1 |
| chr8.4 | CDS | 72119359 | 72119415 | 72119359 | ID=cds.MS.gene25078.t1;Parent=MS.gene25078.t1 |
| chr8.4 | exon | 72120081 | 72120317 | 72120081 | ID=MS.gene25078.t1.exon5;Parent=MS.gene25078.t1 |
| chr8.4 | CDS | 72120081 | 72120317 | 72120081 | ID=cds.MS.gene25078.t1;Parent=MS.gene25078.t1 |
| chr8.4 | exon | 72121181 | 72121324 | 72121181 | ID=MS.gene25078.t1.exon6;Parent=MS.gene25078.t1 |
| chr8.4 | CDS | 72121181 | 72121324 | 72121181 | ID=cds.MS.gene25078.t1;Parent=MS.gene25078.t1 |
| Gene Sequence |
| Protein sequence |
