Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25223.t1 | XP_013450246.1 | 91.5 | 188 | 12 | 2 | 1 | 185 | 1 | 187 | 2.00E-83 | 318.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25223.t1 | W5X2N3 | 52.8 | 199 | 74 | 5 | 1 | 185 | 1 | 193 | 3.0e-48 | 193.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25223.t1 | I3SRQ1 | 91.5 | 188 | 12 | 2 | 1 | 185 | 1 | 187 | 1.4e-83 | 318.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049230 | MS.gene25223 | 0.811123 | 8.20E-51 | -1.69E-46 |
| MS.gene051535 | MS.gene25223 | 0.803947 | 2.73E-49 | -1.69E-46 |
| MS.gene052176 | MS.gene25223 | 0.826486 | 2.64E-54 | -1.69E-46 |
| MS.gene054930 | MS.gene25223 | 0.820618 | 6.24E-53 | -1.69E-46 |
| MS.gene059788 | MS.gene25223 | 0.828016 | 1.14E-54 | -1.69E-46 |
| MS.gene059899 | MS.gene25223 | 0.824469 | 7.94E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25223.t1 | MTR_7g106660 | 93.085 | 188 | 9 | 2 | 1 | 185 | 1 | 187 | 2.70e-126 | 353 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25223.t1 | AT2G35900 | 46.078 | 204 | 79 | 7 | 1 | 185 | 1 | 192 | 8.72e-53 | 167 |
| MS.gene25223.t1 | AT2G35900 | 41.353 | 133 | 61 | 5 | 59 | 185 | 26 | 147 | 1.57e-23 | 91.3 |
| MS.gene25223.t1 | AT2G35900 | 41.353 | 133 | 61 | 5 | 59 | 185 | 26 | 147 | 1.57e-23 | 91.3 |
Find 48 sgRNAs with CRISPR-Local
Find 121 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTCCGTATCCTTGGATTT+AGG | 0.265695 | 7.3:+7376390 | None:intergenic |
| CGCAACCTCTTCGGTGGTCT+CGG | 0.314056 | 7.3:-7376552 | MS.gene25223:CDS |
| CTGAGATTTCACGACTTTCC+TGG | 0.320318 | 7.3:+7378126 | None:intergenic |
| GATAACAACAACTCTTCTTC+AGG | 0.370020 | 7.3:-7378169 | MS.gene25223:CDS |
| CTAAGAAAATGGGTTGGGTT+TGG | 0.371297 | 7.3:-7378201 | None:intergenic |
| GGGATACCTATTGAAGATAA+TGG | 0.379651 | 7.3:-7376429 | MS.gene25223:CDS |
| AGAGGAGGGTCTGCCACATT+TGG | 0.396459 | 7.3:-7376648 | MS.gene25223:CDS |
| ATTTAGGATGAGTTTCTTGC+CGG | 0.398851 | 7.3:+7376406 | None:intergenic |
| TTTGATTGCAGCACTTCAAC+AGG | 0.402118 | 7.3:+7376711 | None:intergenic |
| AGTTTGCAATAACATCAAAA+AGG | 0.435162 | 7.3:+7376493 | None:intergenic |
| ATCAGCTGATTCCGTATCCT+TGG | 0.436734 | 7.3:+7376383 | None:intergenic |
| GGAAGCTAAGAAAATGGGTT+GGG | 0.440868 | 7.3:-7378206 | None:intergenic |
| GTCATGGAGCGCAACCTCTT+CGG | 0.456959 | 7.3:-7376561 | MS.gene25223:CDS |
| TGCCGGCCATTATCTTCAAT+AGG | 0.466167 | 7.3:+7376423 | None:intergenic |
| CATGGAATGTTCAACTTCCC+TGG | 0.467653 | 7.3:-7376603 | MS.gene25223:CDS |
| CATCTCTGCATCAAATATAG+AGG | 0.468284 | 7.3:+7376467 | None:intergenic |
| TTGAACCTGGAAAATTCATT+CGG | 0.473945 | 7.3:-7378087 | MS.gene25223:CDS |
| TAGGTATCCCTCGCCTCATA+CGG | 0.477154 | 7.3:+7376442 | None:intergenic |
| ATCACCAGTGAGGTACTTAG+AGG | 0.483893 | 7.3:-7376666 | MS.gene25223:CDS |
| TGATACTGATTTCTCTGCAT+TGG | 0.487086 | 7.3:-7376364 | MS.gene25223:CDS |
| ATGCAGAGATGCCCCGTATG+AGG | 0.495867 | 7.3:-7376455 | MS.gene25223:CDS |
| GAGCTTCTCAAAACTTGCGC+TGG | 0.511543 | 7.3:-7378046 | MS.gene25223:CDS |
| TCAATATCACTTCGTAGCCC+AGG | 0.516666 | 7.3:+7376585 | None:intergenic |
| TGGAAGCTAAGAAAATGGGT+TGG | 0.519769 | 7.3:-7378207 | None:intergenic |
| CCTGGTGGAGCATCGTTCAT+CGG | 0.520580 | 7.3:+7378144 | None:intergenic |
| CCGATGAACGATGCTCCACC+AGG | 0.527517 | 7.3:-7378144 | MS.gene25223:CDS |
| TCATCCTAAATCCAAGGATA+CGG | 0.528227 | 7.3:-7376394 | MS.gene25223:CDS |
| AGGTATCCCTCGCCTCATAC+GGG | 0.544190 | 7.3:+7376443 | None:intergenic |
| CCCTCCTCTAAGTACCTCAC+TGG | 0.550025 | 7.3:+7376662 | None:intergenic |
| ATGGAATGTTCAACTTCCCT+GGG | 0.553660 | 7.3:-7376602 | MS.gene25223:CDS |
| CAGGGAAGTTGAACATTCCA+TGG | 0.558704 | 7.3:+7376604 | None:intergenic |
| ACGAAGTGATATTGAAGTCA+TGG | 0.559482 | 7.3:-7376577 | MS.gene25223:CDS |
| TACCTATTGAAGATAATGGC+CGG | 0.564553 | 7.3:-7376425 | MS.gene25223:CDS |
| AGAAACTCATCCTAAATCCA+AGG | 0.596218 | 7.3:-7376400 | MS.gene25223:CDS |
| AGATGCCCCGTATGAGGCGA+GGG | 0.597898 | 7.3:-7376449 | MS.gene25223:CDS |
| AAAACCGAAGAAGTTGAACC+TGG | 0.597931 | 7.3:-7378100 | MS.gene25223:CDS |
| GAGATGCCCCGTATGAGGCG+AGG | 0.605612 | 7.3:-7376450 | MS.gene25223:CDS |
| CAATATCACTTCGTAGCCCA+GGG | 0.608807 | 7.3:+7376586 | None:intergenic |
| ACCAGTGAGGTACTTAGAGG+AGG | 0.611706 | 7.3:-7376663 | MS.gene25223:CDS |
| ATCTCTGCATCAAATATAGA+GGG | 0.614696 | 7.3:+7376468 | None:intergenic |
| ATGGAGCGCAACCTCTTCGG+TGG | 0.620855 | 7.3:-7376558 | MS.gene25223:CDS |
| CCAGTGAGGTACTTAGAGGA+GGG | 0.628488 | 7.3:-7376662 | MS.gene25223:CDS |
| AGATTTCACGACTTTCCTGG+TGG | 0.634477 | 7.3:+7378129 | None:intergenic |
| AGCGACCGAGACCACCGAAG+AGG | 0.648679 | 7.3:+7376547 | None:intergenic |
| GCAAATAGCTCATCAGACCA+TGG | 0.656602 | 7.3:-7376621 | MS.gene25223:CDS |
| GGTATCCCTCGCCTCATACG+GGG | 0.681041 | 7.3:+7376444 | None:intergenic |
| GCTATTTGCTGAGCCAAATG+TGG | 0.697929 | 7.3:+7376635 | None:intergenic |
| AGAAGAAGATATCACCAGTG+AGG | 0.746392 | 7.3:-7376676 | MS.gene25223:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTATTTATTAGGTATT+AGG | - | chr7.3:7376598-7376617 | MS.gene25223:CDS | 10.0% |
| !!! | TTCATACTATTTTATTTATT+AGG | - | chr7.3:7376591-7376610 | MS.gene25223:CDS | 10.0% |
| !! | AATAATAATAAAGAAGAAGA+AGG | + | chr7.3:7376541-7376560 | None:intergenic | 15.0% |
| !! | ATTCAAATTAAATCGTAAAA+AGG | + | chr7.3:7376943-7376962 | None:intergenic | 15.0% |
| !! | TATGATACTTTATATTTGAA+TGG | + | chr7.3:7377389-7377408 | None:intergenic | 15.0% |
| !!! | ATTTAATTTGAATGATCATT+TGG | - | chr7.3:7376950-7376969 | MS.gene25223:intron | 15.0% |
| !!! | ATTTCAATTTTTAGGTATTA+GGG | - | chr7.3:7377571-7377590 | MS.gene25223:intron | 15.0% |
| !!! | GGATTTTTAATCAATTTTTT+TGG | - | chr7.3:7376633-7376652 | MS.gene25223:CDS | 15.0% |
| !!! | TATTGGTTGATTATATTTTT+TGG | - | chr7.3:7377679-7377698 | MS.gene25223:intron | 15.0% |
| !!! | TTCAATTGATTTCAATTTTT+AGG | - | chr7.3:7377563-7377582 | MS.gene25223:intron | 15.0% |
| !! | AAAATAGTATGAAGCAAATT+GGG | + | chr7.3:7376584-7376603 | None:intergenic | 20.0% |
| !! | ATTTATTAGGTATTAGGATT+AGG | - | chr7.3:7376604-7376623 | MS.gene25223:CDS | 20.0% |
| !! | TAAAATAGTATGAAGCAAAT+TGG | + | chr7.3:7376585-7376604 | None:intergenic | 20.0% |
| !! | TATAGTATAGGATGTTATAA+TGG | + | chr7.3:7376803-7376822 | None:intergenic | 20.0% |
| !! | TGAATATCAAGATAATTTGA+TGG | + | chr7.3:7377631-7377650 | None:intergenic | 20.0% |
| !!! | AAAAAGTTTTTGTGCTTTAT+TGG | - | chr7.3:7377662-7377681 | MS.gene25223:intron | 20.0% |
| !!! | GATTTCAATTTTTAGGTATT+AGG | - | chr7.3:7377570-7377589 | MS.gene25223:intron | 20.0% |
| ! | AAGTATCATAATATGACATG+TGG | - | chr7.3:7377399-7377418 | MS.gene25223:intron | 25.0% |
| ! | AGTTTGCAATAACATCAAAA+AGG | + | chr7.3:7378053-7378072 | None:intergenic | 25.0% |
| ! | ATTGAAATCAATTGCAGTAT+TGG | + | chr7.3:7377463-7377482 | None:intergenic | 25.0% |
| ! | GACTTCATAAAGTATAGTAT+AGG | + | chr7.3:7376815-7376834 | None:intergenic | 25.0% |
| ! | TATCTTGATGTTGATACAAA+TGG | - | chr7.3:7377540-7377559 | MS.gene25223:intron | 25.0% |
| ! | TCTAATTTCATCTTTACCTT+TGG | - | chr7.3:7377796-7377815 | MS.gene25223:intron | 25.0% |
| !! | AAACATTGTCAATTTTGTCT+TGG | + | chr7.3:7377055-7377074 | None:intergenic | 25.0% |
| !!! | TTAGTGACTTGTTTTGTATA+GGG | - | chr7.3:7377290-7377309 | MS.gene25223:intron | 25.0% |
| !!! | TTTAGTGACTTGTTTTGTAT+AGG | - | chr7.3:7377289-7377308 | MS.gene25223:intron | 25.0% |
| !!! | TTTTTGGTCATTATGTTCTT+CGG | - | chr7.3:7377695-7377714 | MS.gene25223:intron | 25.0% |
| AAATATGCTAAAACCACCAA+AGG | - | chr7.3:7376889-7376908 | MS.gene25223:intron | 30.0% | |
| AAGCAAATTGGGAATAGAAT+AGG | + | chr7.3:7376573-7376592 | None:intergenic | 30.0% | |
| ACTTTACCTGAAAAGAACAT+TGG | - | chr7.3:7377137-7377156 | MS.gene25223:intron | 30.0% | |
| AGCAAATTGGGAATAGAATA+GGG | + | chr7.3:7376572-7376591 | None:intergenic | 30.0% | |
| ATCTCTGCATCAAATATAGA+GGG | + | chr7.3:7378078-7378097 | None:intergenic | 30.0% | |
| GAATGATCATTTGGATCAAT+TGG | - | chr7.3:7376959-7376978 | MS.gene25223:intron | 30.0% | |
| TATACTTTATGAAGTCTCTG+AGG | - | chr7.3:7376819-7376838 | MS.gene25223:intron | 30.0% | |
| TCAACATCAAGATACTTTGA+TGG | + | chr7.3:7377534-7377553 | None:intergenic | 30.0% | |
| TCATTTGGATCAATTGGAAA+TGG | - | chr7.3:7376965-7376984 | MS.gene25223:intron | 30.0% | |
| TTGAACCTGGAAAATTCATT+CGG | - | chr7.3:7376456-7376475 | MS.gene25223:CDS | 30.0% | |
| TTTCGAAAATCAGGTTTCTT+GGG | + | chr7.3:7377267-7377286 | None:intergenic | 30.0% | |
| ! | ATTGTACCAATGTTCTTTTC+AGG | + | chr7.3:7377146-7377165 | None:intergenic | 30.0% |
| ! | TTTTGGTCATTATGTTCTTC+GGG | - | chr7.3:7377696-7377715 | MS.gene25223:intron | 30.0% |
| !! | TACAAATTTTAGCACACGTT+TGG | + | chr7.3:7376774-7376793 | None:intergenic | 30.0% |
| !! | TTTGTATAGGGTTGTTTTAC+AGG | - | chr7.3:7377302-7377321 | MS.gene25223:intron | 30.0% |
| AAACCACCAAAGGTTTCATT+TGG | - | chr7.3:7376899-7376918 | MS.gene25223:intron | 35.0% | |
| ACGAAGTGATATTGAAGTCA+TGG | - | chr7.3:7377966-7377985 | MS.gene25223:intron | 35.0% | |
| AGAAACTCATCCTAAATCCA+AGG | - | chr7.3:7378143-7378162 | MS.gene25223:CDS | 35.0% | |
| AGCATTAAGGATCAGAAAGT+CGG | + | chr7.3:7377027-7377046 | None:intergenic | 35.0% | |
| AGGTATTAGGATTAGGATGA+TGG | - | chr7.3:7376611-7376630 | MS.gene25223:CDS | 35.0% | |
| CACTAAAGCTTTCGAAAATC+AGG | + | chr7.3:7377276-7377295 | None:intergenic | 35.0% | |
| CATCTCTGCATCAAATATAG+AGG | + | chr7.3:7378079-7378098 | None:intergenic | 35.0% | |
| CTTTCGAAAATCAGGTTTCT+TGG | + | chr7.3:7377268-7377287 | None:intergenic | 35.0% | |
| GATAACAACAACTCTTCTTC+AGG | - | chr7.3:7376374-7376393 | MS.gene25223:CDS | 35.0% | |
| GATGAAACAGGTACACAAAA+AGG | + | chr7.3:7377746-7377765 | None:intergenic | 35.0% | |
| GCAGCTGAAGAAATGAAAAA+TGG | - | chr7.3:7378027-7378046 | MS.gene25223:intron | 35.0% | |
| GGGATACCTATTGAAGATAA+TGG | - | chr7.3:7378114-7378133 | MS.gene25223:CDS | 35.0% | |
| GGTATTAGGATTAGGATGAT+GGG | - | chr7.3:7376612-7376631 | MS.gene25223:CDS | 35.0% | |
| GTTCTATTTGTGTAGTGTGT+GGG | - | chr7.3:7377427-7377446 | MS.gene25223:intron | 35.0% | |
| TCATCCTAAATCCAAGGATA+CGG | - | chr7.3:7378149-7378168 | MS.gene25223:CDS | 35.0% | |
| TGTTCTATTTGTGTAGTGTG+TGG | - | chr7.3:7377426-7377445 | MS.gene25223:intron | 35.0% | |
| TTACCTTTGGACTAATTCTC+AGG | - | chr7.3:7377809-7377828 | MS.gene25223:intron | 35.0% | |
| ! | ATTTAGGATGAGTTTCTTGC+CGG | + | chr7.3:7378140-7378159 | None:intergenic | 35.0% |
| ! | ATTTTATTCTGCCAAACCGA+TGG | - | chr7.3:7376743-7376762 | MS.gene25223:intron | 35.0% |
| ! | CATTTCCGAATGAATTTTCC+AGG | + | chr7.3:7376464-7376483 | None:intergenic | 35.0% |
| ! | TACCTATTGAAGATAATGGC+CGG | - | chr7.3:7378118-7378137 | MS.gene25223:CDS | 35.0% |
| ! | TGATTTTGCAAAAGCTACAC+AGG | + | chr7.3:7376720-7376739 | None:intergenic | 35.0% |
| ! | TTTTCCAGGTTCAACTTCTT+CGG | + | chr7.3:7376450-7376469 | None:intergenic | 35.0% |
| !! | AAATCAATTGCAGTATTGGC+AGG | + | chr7.3:7377459-7377478 | None:intergenic | 35.0% |
| !! | TGATACTGATTTCTCTGCAT+TGG | - | chr7.3:7378179-7378198 | MS.gene25223:CDS | 35.0% |
| AAAACCGAAGAAGTTGAACC+TGG | - | chr7.3:7376443-7376462 | MS.gene25223:CDS | 40.0% | |
| AGAAGAAGATATCACCAGTG+AGG | - | chr7.3:7377867-7377886 | MS.gene25223:intron | 40.0% | |
| ATCGCTCCAAATGAAACCTT+TGG | + | chr7.3:7376908-7376927 | None:intergenic | 40.0% | |
| ATGGAATGTTCAACTTCCCT+GGG | - | chr7.3:7377941-7377960 | MS.gene25223:intron | 40.0% | |
| GATTCCGTATCCTTGGATTT+AGG | + | chr7.3:7378156-7378175 | None:intergenic | 40.0% | |
| TAGGTATTAGGGTTATGCAC+AGG | - | chr7.3:7377582-7377601 | MS.gene25223:intron | 40.0% | |
| TTTGATTGCAGCACTTCAAC+AGG | + | chr7.3:7377835-7377854 | None:intergenic | 40.0% | |
| ! | TGTCTTGGCATAGAGCATTA+AGG | + | chr7.3:7377040-7377059 | None:intergenic | 40.0% |
| !! | GGTTGTTTTACAGGCTTTGA+AGG | - | chr7.3:7377311-7377330 | MS.gene25223:intron | 40.0% |
| AGATTTCACGACTTTCCTGG+TGG | + | chr7.3:7376417-7376436 | None:intergenic | 45.0% | |
| AGGCCTGAGAATTAGTCCAA+AGG | + | chr7.3:7377815-7377834 | None:intergenic | 45.0% | |
| CAATATCACTTCGTAGCCCA+GGG | + | chr7.3:7377960-7377979 | None:intergenic | 45.0% | |
| CACTTGTGCATGTACATGTG+TGG | - | chr7.3:7377206-7377225 | MS.gene25223:intron | 45.0% | |
| CAGGGAAGTTGAACATTCCA+TGG | + | chr7.3:7377942-7377961 | None:intergenic | 45.0% | |
| CATGGAATGTTCAACTTCCC+TGG | - | chr7.3:7377940-7377959 | MS.gene25223:intron | 45.0% | |
| CATGTACATGCACAAGTGAC+AGG | + | chr7.3:7377204-7377223 | None:intergenic | 45.0% | |
| CTGAGATTTCACGACTTTCC+TGG | + | chr7.3:7376420-7376439 | None:intergenic | 45.0% | |
| GCAAATAGCTCATCAGACCA+TGG | - | chr7.3:7377922-7377941 | MS.gene25223:intron | 45.0% | |
| GCAACATAGCAGGAAGAGAA+TGG | - | chr7.3:7377176-7377195 | MS.gene25223:intron | 45.0% | |
| GCTCCAAATGAAACCTTTGG+TGG | + | chr7.3:7376905-7376924 | None:intergenic | 45.0% | |
| TCAATATCACTTCGTAGCCC+AGG | + | chr7.3:7377961-7377980 | None:intergenic | 45.0% | |
| TGCCGGCCATTATCTTCAAT+AGG | + | chr7.3:7378123-7378142 | None:intergenic | 45.0% | |
| TTCAGTCGCATTTGCAGAGA+GGG | + | chr7.3:7377774-7377793 | None:intergenic | 45.0% | |
| TTTCAGTCGCATTTGCAGAG+AGG | + | chr7.3:7377775-7377794 | None:intergenic | 45.0% | |
| ! | ATCACCAGTGAGGTACTTAG+AGG | - | chr7.3:7377877-7377896 | MS.gene25223:intron | 45.0% |
| ! | ATCAGCTGATTCCGTATCCT+TGG | + | chr7.3:7378163-7378182 | None:intergenic | 45.0% |
| ! | GATGGAGCACTTCCAAAAAG+TGG | + | chr7.3:7377516-7377535 | None:intergenic | 45.0% |
| ! | GCTATTTGCTGAGCCAAATG+TGG | + | chr7.3:7377911-7377930 | None:intergenic | 45.0% |
| ! | GTTGTCGTTTGCAACATAGC+AGG | - | chr7.3:7377166-7377185 | MS.gene25223:intron | 45.0% |
| !! | CACACGTTTGGATTAGCCAT+CGG | + | chr7.3:7376762-7376781 | None:intergenic | 45.0% |
| !! | GCACAAGTAGCACCACTTTT+TGG | - | chr7.3:7377501-7377520 | MS.gene25223:intron | 45.0% |
| !! | GTTTGGATTAGCCATCGGTT+TGG | + | chr7.3:7376757-7376776 | None:intergenic | 45.0% |
| GAGCTTCTCAAAACTTGCGC+TGG | - | chr7.3:7376497-7376516 | MS.gene25223:CDS | 50.0% | |
| TAGGTATCCCTCGCCTCATA+CGG | + | chr7.3:7378104-7378123 | None:intergenic | 50.0% | |
| ! | ACCAGTGAGGTACTTAGAGG+AGG | - | chr7.3:7377880-7377899 | MS.gene25223:intron | 50.0% |
| ! | AGTGAGTGTCGCTGCATGTT+GGG | + | chr7.3:7377351-7377370 | None:intergenic | 50.0% |
| ! | CCAGTGAGGTACTTAGAGGA+GGG | - | chr7.3:7377881-7377900 | MS.gene25223:intron | 50.0% |
| AGAGGAGGGTCTGCCACATT+TGG | - | chr7.3:7377895-7377914 | MS.gene25223:intron | 55.0% | |
| AGGTATCCCTCGCCTCATAC+GGG | + | chr7.3:7378103-7378122 | None:intergenic | 55.0% | |
| AGTCGCATTTGCAGAGAGGG+TGG | + | chr7.3:7377771-7377790 | None:intergenic | 55.0% | |
| ATGCAGAGATGCCCCGTATG+AGG | - | chr7.3:7378088-7378107 | MS.gene25223:CDS | 55.0% | |
| CCCTCCTCTAAGTACCTCAC+TGG | + | chr7.3:7377884-7377903 | None:intergenic | 55.0% | |
| GAGAGGGTGGGTGATGAAAC+AGG | + | chr7.3:7377758-7377777 | None:intergenic | 55.0% | |
| GTCATGGAGCGCAACCTCTT+CGG | - | chr7.3:7377982-7378001 | MS.gene25223:intron | 55.0% | |
| GTCGCATTTGCAGAGAGGGT+GGG | + | chr7.3:7377770-7377789 | None:intergenic | 55.0% | |
| ! | CAGTGAGTGTCGCTGCATGT+TGG | + | chr7.3:7377352-7377371 | None:intergenic | 55.0% |
| !! | CCTGGTGGAGCATCGTTCAT+CGG | + | chr7.3:7376402-7376421 | None:intergenic | 55.0% |
| AGATGCCCCGTATGAGGCGA+GGG | - | chr7.3:7378094-7378113 | MS.gene25223:CDS | 60.0% | |
| ATGGAGCGCAACCTCTTCGG+TGG | - | chr7.3:7377985-7378004 | MS.gene25223:intron | 60.0% | |
| CCGATGAACGATGCTCCACC+AGG | - | chr7.3:7376399-7376418 | MS.gene25223:CDS | 60.0% | |
| CGCAACCTCTTCGGTGGTCT+CGG | - | chr7.3:7377991-7378010 | MS.gene25223:intron | 60.0% | |
| GGTATCCCTCGCCTCATACG+GGG | + | chr7.3:7378102-7378121 | None:intergenic | 60.0% | |
| AGCGACCGAGACCACCGAAG+AGG | + | chr7.3:7377999-7378018 | None:intergenic | 65.0% | |
| GAGATGCCCCGTATGAGGCG+AGG | - | chr7.3:7378093-7378112 | MS.gene25223:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 7376350 | 7378215 | 7376350 | ID=MS.gene25223 |
| chr7.3 | mRNA | 7376350 | 7378215 | 7376350 | ID=MS.gene25223.t1;Parent=MS.gene25223 |
| chr7.3 | exon | 7378043 | 7378215 | 7378043 | ID=MS.gene25223.t1.exon1;Parent=MS.gene25223.t1 |
| chr7.3 | CDS | 7378043 | 7378215 | 7378043 | ID=cds.MS.gene25223.t1;Parent=MS.gene25223.t1 |
| chr7.3 | exon | 7376350 | 7376734 | 7376350 | ID=MS.gene25223.t1.exon2;Parent=MS.gene25223.t1 |
| chr7.3 | CDS | 7376350 | 7376734 | 7376350 | ID=cds.MS.gene25223.t1;Parent=MS.gene25223.t1 |
| Gene Sequence |
| Protein sequence |
