AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene049230


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049230.t1 MTR_3g097060 98.810 420 4 1 1 419 1 420 0.0 845
MS.gene049230.t1 MTR_3g097060 98.688 381 4 1 1 380 1 381 0.0 762
MS.gene049230.t1 MTR_3g096780 32.208 385 176 10 39 417 39 344 1.80e-50 176
MS.gene049230.t1 MTR_8g094410 30.245 367 213 10 39 394 37 371 1.80e-42 154
MS.gene049230.t1 MTR_8g094410 29.494 356 222 9 68 419 14 344 4.33e-34 131
MS.gene049230.t1 MTR_8g094410 32.558 129 87 0 44 172 250 378 6.78e-15 76.3
MS.gene049230.t1 MTR_8g094410 30.245 367 213 10 39 394 37 371 2.73e-42 154
MS.gene049230.t1 MTR_8g094410 29.494 356 222 9 68 419 14 344 9.12e-34 131
MS.gene049230.t1 MTR_8g094410 32.558 129 87 0 44 172 250 378 8.37e-15 76.3
MS.gene049230.t1 MTR_8g094410 32.119 302 181 7 121 419 15 295 1.01e-31 124
MS.gene049230.t1 MTR_8g094410 29.900 301 189 8 39 331 37 323 1.12e-31 124
MS.gene049230.t1 MTR_8g094410 28.994 338 200 11 68 394 14 322 7.98e-31 121
MS.gene049230.t1 MTR_8g094410 32.558 129 87 0 44 172 201 329 4.23e-15 76.6
MS.gene049230.t1 MTR_8g094410 32.119 302 181 7 121 419 15 295 2.36e-31 124
MS.gene049230.t1 MTR_8g094410 29.900 301 189 8 39 331 37 323 2.94e-31 123
MS.gene049230.t1 MTR_8g094410 28.994 338 200 11 68 394 14 322 2.31e-30 121
MS.gene049230.t1 MTR_8g094410 32.558 129 87 0 44 172 201 329 6.51e-15 76.3
MS.gene049230.t1 MTR_0024s0070 27.670 412 233 16 39 418 8 386 2.48e-31 124
MS.gene049230.t1 MTR_5g089900 28.219 365 221 9 68 415 326 666 1.16e-29 122
MS.gene049230.t1 MTR_5g089900 30.588 340 188 10 39 352 349 666 3.72e-27 114
MS.gene049230.t1 MTR_5g089900 28.975 283 156 9 152 415 306 562 6.53e-21 95.9
MS.gene049230.t1 MTR_5g089900 33.838 198 114 5 225 417 316 501 3.62e-20 93.6
MS.gene049230.t1 MTR_0095s0070 33.333 267 149 7 143 405 33 274 3.48e-29 115
MS.gene049230.t1 MTR_0095s0070 29.394 330 159 9 9 331 2 264 7.07e-28 111
MS.gene049230.t1 MTR_0095s0070 30.282 142 96 2 39 180 138 276 3.29e-12 67.0
MS.gene049230.t1 MTR_4g029410 29.752 363 217 10 68 415 67 406 2.28e-28 118
MS.gene049230.t1 MTR_4g029410 28.065 367 225 13 5 352 60 406 3.09e-20 94.0
MS.gene049230.t1 MTR_4g029410 31.301 246 123 11 188 419 31 244 6.58e-18 86.7
MS.gene049230.t1 MTR_4g029410 27.036 307 178 10 127 415 24 302 4.71e-17 84.0
MS.gene049230.t1 MTR_6g034795 30.894 369 206 13 68 415 277 617 1.95e-27 115
MS.gene049230.t1 MTR_6g034795 27.941 340 188 11 112 416 203 520 9.72e-24 104
MS.gene049230.t1 MTR_6g034795 27.762 353 221 10 18 352 281 617 9.91e-23 101
MS.gene049230.t1 MTR_6g034795 30.196 255 157 7 171 417 211 452 2.52e-21 97.4
MS.gene049230.t1 MTR_6g034795 33.908 174 99 5 32 201 465 626 7.93e-14 73.9
MS.gene049230.t1 MTR_3g064560 28.496 379 221 11 58 415 295 644 3.53e-27 114
MS.gene049230.t1 MTR_3g064560 27.976 336 201 8 39 352 328 644 4.18e-26 111
MS.gene049230.t1 MTR_3g064560 30.000 270 150 5 163 415 294 541 1.32e-24 107
MS.gene049230.t1 MTR_3g064560 32.035 231 131 8 197 419 270 482 7.99e-18 86.7
MS.gene049230.t1 MTR_8g094410 30.189 265 151 7 136 394 1 237 1.07e-26 109
MS.gene049230.t1 MTR_8g094410 30.738 244 151 6 88 327 5 234 9.87e-24 101
MS.gene049230.t1 MTR_8g094410 26.860 242 165 3 39 280 8 237 1.03e-20 92.4
MS.gene049230.t1 MTR_8g094410 31.441 229 133 5 193 419 4 210 1.25e-20 92.4
MS.gene049230.t1 MTR_8g094410 32.558 129 87 0 44 172 116 244 3.80e-15 76.3
MS.gene049230.t1 MTR_7g086050 28.324 346 212 10 39 369 158 482 1.10e-26 113
MS.gene049230.t1 MTR_7g086050 33.588 262 135 10 112 361 141 375 2.04e-25 109
MS.gene049230.t1 MTR_7g072410 29.670 364 216 11 68 415 265 604 7.69e-26 110
MS.gene049230.t1 MTR_7g072410 27.671 365 229 11 5 352 258 604 1.98e-22 100
MS.gene049230.t1 MTR_7g072410 29.796 245 133 9 188 417 220 440 1.32e-18 89.0
MS.gene049230.t1 MTR_7g072410 27.333 300 173 10 138 415 224 500 9.72e-18 86.3
MS.gene049230.t1 MTR_1g099220 29.589 365 216 12 68 415 280 620 2.20e-25 109
MS.gene049230.t1 MTR_1g099220 28.177 362 226 10 9 352 275 620 1.00e-24 107
MS.gene049230.t1 MTR_1g099220 33.193 238 129 8 192 417 236 455 6.60e-21 95.9
MS.gene049230.t1 MTR_1g099220 27.000 300 172 8 138 412 236 513 1.37e-19 92.0
MS.gene049230.t1 MTR_1g099220 34.270 178 105 5 26 201 462 629 3.10e-15 78.6
MS.gene049230.t1 MTR_2g079610 28.253 269 177 4 56 317 205 464 3.38e-25 107
MS.gene049230.t1 MTR_2g079610 26.384 307 196 9 68 363 113 400 7.64e-14 73.6
MS.gene049230.t1 MTR_7g063440 29.389 262 150 6 112 349 132 382 5.58e-25 105
MS.gene049230.t1 MTR_7g063440 29.455 275 146 7 164 412 130 382 1.45e-20 93.2
MS.gene049230.t1 MTR_7g063440 27.881 269 158 5 58 301 130 387 1.64e-17 84.3
MS.gene049230.t1 MTR_7g063440 37.500 152 90 4 40 190 240 387 4.97e-16 79.7
MS.gene049230.t1 MTR_7g063440 23.699 346 192 8 118 417 17 336 1.94e-12 68.9
MS.gene049230.t1 MTR_7g063440 28.788 198 107 7 39 208 163 354 1.78e-11 65.9
MS.gene049230.t1 MTR_1g042800 30.704 355 197 12 30 352 265 602 9.08e-25 107
MS.gene049230.t1 MTR_1g042800 27.541 305 169 11 138 415 219 498 2.14e-21 97.4
MS.gene049230.t1 MTR_1g042800 27.838 370 218 11 68 415 260 602 6.56e-21 95.9
MS.gene049230.t1 MTR_1g042800 33.333 198 115 5 225 417 250 435 2.38e-20 94.4
MS.gene049230.t1 MTR_7g063440 29.389 262 150 6 112 349 224 474 9.18e-25 106
MS.gene049230.t1 MTR_7g063440 29.455 275 146 7 164 412 222 474 2.80e-20 93.2
MS.gene049230.t1 MTR_7g063440 27.881 269 158 5 58 301 222 479 1.92e-17 84.7
MS.gene049230.t1 MTR_7g063440 37.500 152 90 4 40 190 332 479 6.53e-16 79.7
MS.gene049230.t1 MTR_7g063440 23.590 390 214 11 86 417 65 428 4.77e-13 70.9
MS.gene049230.t1 MTR_7g063440 28.788 198 107 7 39 208 255 446 2.41e-11 65.9
MS.gene049230.t1 MTR_3g069030 29.528 254 142 7 120 349 216 456 1.08e-24 105
MS.gene049230.t1 MTR_3g069030 31.136 273 160 7 160 417 202 461 6.08e-23 100
MS.gene049230.t1 MTR_3g069030 30.451 266 149 8 58 299 206 459 1.49e-17 84.7
MS.gene049230.t1 MTR_3g069030 29.381 194 109 4 39 208 239 428 1.84e-15 78.6
MS.gene049230.t1 MTR_5g038220 27.525 396 237 12 39 415 19 383 1.24e-24 104
MS.gene049230.t1 MTR_5g038220 25.749 334 210 9 39 353 70 384 2.68e-20 92.4
MS.gene049230.t1 MTR_5g038220 30.043 233 143 7 139 363 15 235 4.17e-18 85.9
MS.gene049230.t1 MTR_1g006695 30.390 385 212 15 69 412 14 383 1.38e-24 105
MS.gene049230.t1 MTR_1g006695 27.964 329 188 11 120 415 13 325 6.83e-23 100
MS.gene049230.t1 MTR_1g006695 27.826 460 231 20 5 401 4 425 1.16e-21 97.1
MS.gene049230.t1 MTR_8g094410 34.286 175 102 6 39 208 21 187 6.71e-24 100
MS.gene049230.t1 MTR_8g094410 30.332 211 131 4 124 331 2 199 6.06e-21 92.4
MS.gene049230.t1 MTR_8g094410 29.464 224 126 6 177 394 1 198 2.51e-18 85.1
MS.gene049230.t1 MTR_8g094410 26.794 209 141 3 72 280 2 198 5.03e-16 78.2
MS.gene049230.t1 MTR_8g094410 32.558 129 87 0 44 172 77 205 1.93e-15 76.6
MS.gene049230.t1 MTR_8g094410 32.240 183 109 4 239 419 2 171 9.69e-15 74.3
MS.gene049230.t1 MTR_7g016640 26.509 381 226 11 20 362 7 371 1.30e-22 99.4
MS.gene049230.t1 MTR_7g016640 26.159 302 185 9 39 314 86 375 7.20e-18 85.5
MS.gene049230.t1 MTR_7g016640 26.509 381 226 11 20 362 7 371 1.91e-22 99.4
MS.gene049230.t1 MTR_7g016640 26.159 302 185 9 39 314 86 375 8.99e-18 85.5
MS.gene049230.t1 MTR_3g086300 28.571 357 221 13 65 406 145 482 8.05e-22 98.2
MS.gene049230.t1 MTR_3g086300 29.000 300 184 7 126 417 153 431 6.91e-20 92.0
MS.gene049230.t1 MTR_3g086300 25.290 431 263 16 1 394 122 530 6.28e-17 83.2
MS.gene049230.t1 MTR_3g109650 26.426 333 196 11 120 415 16 336 2.75e-20 93.6
MS.gene049230.t1 MTR_3g109650 26.933 401 231 15 66 417 14 401 6.29e-18 86.3
MS.gene049230.t1 MTR_3g109650 26.353 425 232 16 39 404 39 441 2.19e-17 84.7
MS.gene049230.t1 MTR_5g020630 27.321 377 195 13 39 355 85 442 3.40e-20 92.4
MS.gene049230.t1 MTR_5g020630 26.168 428 238 15 40 411 30 435 5.34e-19 89.0
MS.gene049230.t1 MTR_3g113250 27.059 340 200 15 39 352 82 399 5.82e-18 86.3
MS.gene049230.t1 MTR_3g113250 27.165 254 137 9 164 394 47 275 4.60e-12 68.2
MS.gene049230.t1 MTR_7g451760 36.364 154 91 4 39 191 118 265 1.72e-13 70.9
MS.gene049230.t1 MTR_7g451760 25.794 252 167 7 92 335 9 248 6.48e-13 69.3
MS.gene049230.t1 MTR_7g451760 25.292 257 165 5 40 289 9 245 5.03e-11 63.5
MS.gene049230.t1 MTR_7g047560 36.364 154 91 4 39 191 118 265 1.72e-13 70.9
MS.gene049230.t1 MTR_7g047560 25.794 252 167 7 92 335 9 248 6.48e-13 69.3
MS.gene049230.t1 MTR_7g047560 25.292 257 165 5 40 289 9 245 5.03e-11 63.5
MS.gene049230.t1 MTR_7g063440 26.984 252 137 5 164 415 222 426 4.33e-13 70.9
MS.gene049230.t1 MTR_7g063440 28.505 214 118 4 58 247 222 424 5.24e-12 67.8
MS.gene049230.t1 MTR_3g109650 26.101 318 181 12 120 404 47 343 8.92e-12 67.0
MS.gene049230.t1 MTR_3g109650 25.234 321 196 12 47 333 26 336 1.00e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049230.t1 AT5G08710 67.766 394 127 0 25 418 40 433 0.0 536
MS.gene049230.t1 AT5G08710 68.259 293 93 0 25 317 40 332 2.30e-135 391
MS.gene049230.t1 AT5G63860 31.564 358 215 9 39 391 39 371 6.25e-48 169
MS.gene049230.t1 AT5G63860 32.961 358 206 10 67 417 15 345 2.86e-44 160
MS.gene049230.t1 AT5G12350 30.352 369 207 11 68 415 309 648 1.90e-34 136
MS.gene049230.t1 AT5G12350 30.000 340 208 7 39 363 332 656 2.55e-29 121
MS.gene049230.t1 AT5G12350 29.259 270 151 6 163 415 298 544 2.53e-23 103
MS.gene049230.t1 AT5G12350 31.122 196 120 4 225 417 299 482 4.40e-18 87.4
MS.gene049230.t1 AT5G12350 33.918 171 101 5 32 200 496 656 7.95e-15 77.4
MS.gene049230.t1 AT5G19420 29.670 364 216 8 68 415 313 652 2.01e-34 136
MS.gene049230.t1 AT5G19420 29.179 329 206 6 39 352 336 652 3.40e-28 117
MS.gene049230.t1 AT5G19420 29.259 270 151 7 163 415 302 548 1.09e-22 101
MS.gene049230.t1 AT5G19420 31.633 196 119 4 225 417 303 486 2.61e-18 87.8
MS.gene049230.t1 AT5G19420 29.670 364 216 8 68 415 347 686 4.87e-34 135
MS.gene049230.t1 AT5G19420 29.179 329 206 6 39 352 370 686 1.11e-27 116
MS.gene049230.t1 AT5G19420 29.259 270 151 7 163 415 336 582 1.98e-22 100
MS.gene049230.t1 AT5G19420 31.633 196 119 4 225 417 337 520 3.14e-18 87.8
MS.gene049230.t1 AT5G19420 29.670 364 216 8 68 415 313 652 6.02e-34 135
MS.gene049230.t1 AT5G19420 29.179 329 206 6 39 352 336 652 1.28e-27 116
MS.gene049230.t1 AT5G19420 29.259 270 151 7 163 415 302 548 2.05e-22 100
MS.gene049230.t1 AT5G19420 31.633 196 119 4 225 417 303 486 3.16e-18 87.8
MS.gene049230.t1 AT1G27060 29.275 386 234 10 39 415 20 375 3.39e-32 126
MS.gene049230.t1 AT1G27060 26.586 331 211 7 32 352 67 375 8.44e-23 99.8
MS.gene049230.t1 AT1G27060 30.870 230 142 6 139 363 16 233 1.45e-20 93.2
MS.gene049230.t1 AT3G02510 27.073 410 238 16 39 418 10 388 3.62e-31 123
MS.gene049230.t1 AT3G02510 29.641 334 206 11 88 415 7 317 2.15e-26 110
MS.gene049230.t1 AT3G02510 31.795 195 113 7 12 190 197 387 3.23e-16 80.5
MS.gene049230.t1 AT5G16040 28.117 409 235 14 39 418 10 388 1.10e-30 122
MS.gene049230.t1 AT5G48330 29.258 458 247 21 6 412 17 448 2.05e-29 119
MS.gene049230.t1 AT5G48330 29.194 459 247 21 6 412 17 449 4.35e-29 118
MS.gene049230.t1 AT1G69710 29.650 371 210 11 68 415 288 630 1.44e-27 116
MS.gene049230.t1 AT1G69710 29.653 317 187 10 57 352 329 630 3.35e-22 100
MS.gene049230.t1 AT1G69710 28.000 300 168 10 138 412 247 523 1.47e-16 82.8
MS.gene049230.t1 AT1G69710 36.434 129 74 3 39 161 483 609 2.14e-14 75.9
MS.gene049230.t1 AT1G69710 29.650 371 210 11 68 415 301 643 1.46e-27 116
MS.gene049230.t1 AT1G69710 29.653 317 187 10 57 352 342 643 4.15e-22 99.8
MS.gene049230.t1 AT1G69710 28.000 300 168 10 138 412 260 536 1.54e-16 82.4
MS.gene049230.t1 AT1G69710 36.434 129 74 3 39 161 496 622 2.07e-14 75.9
MS.gene049230.t1 AT5G60870 29.553 291 182 7 38 318 123 400 2.52e-27 113
MS.gene049230.t1 AT5G60870 31.169 308 172 11 122 417 104 383 6.14e-27 112
MS.gene049230.t1 AT5G60870 26.797 306 174 10 139 417 49 331 1.21e-15 79.0
MS.gene049230.t1 AT5G60870 31.373 306 170 11 122 415 104 381 2.54e-27 112
MS.gene049230.t1 AT5G60870 25.680 331 172 9 38 360 123 387 2.47e-23 101
MS.gene049230.t1 AT5G60870 26.797 306 174 10 139 417 49 331 5.50e-16 79.7
MS.gene049230.t1 AT5G60870 31.373 306 170 11 122 415 104 381 6.71e-27 112
MS.gene049230.t1 AT5G60870 29.195 298 181 8 38 318 123 407 2.94e-25 107
MS.gene049230.t1 AT5G60870 26.797 306 174 10 139 417 49 331 9.92e-16 79.3
MS.gene049230.t1 AT5G42140 28.493 365 220 9 68 415 278 618 8.11e-27 114
MS.gene049230.t1 AT5G42140 29.296 355 213 11 18 352 282 618 2.64e-24 106
MS.gene049230.t1 AT5G42140 28.146 302 166 11 138 412 234 511 1.73e-21 97.8
MS.gene049230.t1 AT5G42140 31.466 232 141 6 192 417 234 453 3.48e-21 97.1
MS.gene049230.t1 AT5G42140 28.493 365 220 9 68 415 278 618 8.11e-27 114
MS.gene049230.t1 AT5G42140 29.296 355 213 11 18 352 282 618 2.64e-24 106
MS.gene049230.t1 AT5G42140 28.146 302 166 11 138 412 234 511 1.73e-21 97.8
MS.gene049230.t1 AT5G42140 31.466 232 141 6 192 417 234 453 3.48e-21 97.1
MS.gene049230.t1 AT3G47660 30.183 328 196 9 39 352 178 486 1.73e-26 112
MS.gene049230.t1 AT3G47660 28.732 355 163 13 124 415 159 486 5.67e-26 111
MS.gene049230.t1 AT3G47660 27.444 266 158 8 163 415 144 387 4.14e-19 90.5
MS.gene049230.t1 AT3G47660 32.075 159 95 4 32 188 339 486 9.27e-14 73.9
MS.gene049230.t1 AT3G47660 30.183 328 196 9 39 352 323 631 1.89e-26 112
MS.gene049230.t1 AT3G47660 28.732 355 163 13 124 415 304 631 5.41e-26 111
MS.gene049230.t1 AT3G47660 27.444 266 158 8 163 415 289 532 4.96e-19 90.1
MS.gene049230.t1 AT3G47660 32.075 159 95 4 32 188 484 631 1.16e-13 73.6
MS.gene049230.t1 AT3G47660 30.183 328 196 9 39 352 323 631 1.91e-26 112
MS.gene049230.t1 AT3G47660 28.732 355 163 13 124 415 304 631 5.94e-26 111
MS.gene049230.t1 AT3G47660 27.444 266 158 8 163 415 289 532 4.91e-19 90.1
MS.gene049230.t1 AT3G47660 32.075 159 95 4 32 188 484 631 1.29e-13 73.6
MS.gene049230.t1 AT3G47660 30.183 328 196 9 39 352 245 553 1.97e-26 112
MS.gene049230.t1 AT3G47660 28.732 355 163 13 124 415 226 553 6.58e-26 110
MS.gene049230.t1 AT3G47660 27.444 266 158 8 163 415 211 454 4.47e-19 90.5
MS.gene049230.t1 AT3G47660 32.075 159 95 4 32 188 406 553 1.06e-13 73.6
MS.gene049230.t1 AT3G47660 30.183 328 196 9 39 352 359 667 2.00e-26 112
MS.gene049230.t1 AT3G47660 28.732 355 163 13 124 415 340 667 6.33e-26 111
MS.gene049230.t1 AT3G47660 27.444 266 158 8 163 415 325 568 4.60e-19 90.5
MS.gene049230.t1 AT3G47660 32.075 159 95 4 32 188 520 667 1.64e-13 73.2
MS.gene049230.t1 AT3G47660 30.183 328 196 9 39 352 320 628 2.56e-26 112
MS.gene049230.t1 AT3G47660 28.732 355 163 13 124 415 301 628 7.46e-26 110
MS.gene049230.t1 AT3G47660 27.444 266 158 8 163 415 286 529 6.26e-19 89.7
MS.gene049230.t1 AT3G47660 32.075 159 95 4 32 188 481 628 1.40e-13 73.2
MS.gene049230.t1 AT3G47660 30.183 328 196 9 39 352 320 628 2.56e-26 112
MS.gene049230.t1 AT3G47660 28.732 355 163 13 124 415 301 628 7.46e-26 110
MS.gene049230.t1 AT3G47660 27.444 266 158 8 163 415 286 529 6.26e-19 89.7
MS.gene049230.t1 AT3G47660 32.075 159 95 4 32 188 481 628 1.40e-13 73.2
MS.gene049230.t1 AT1G76950 28.689 366 220 11 68 415 282 624 1.41e-25 110
MS.gene049230.t1 AT1G76950 28.571 364 224 11 9 352 277 624 4.30e-23 102
MS.gene049230.t1 AT1G76950 27.152 302 171 9 138 412 238 517 5.78e-21 96.3
MS.gene049230.t1 AT1G76950 33.166 199 115 5 225 417 272 458 2.89e-18 87.8
MS.gene049230.t1 AT1G76950 34.118 170 104 3 32 201 472 633 1.34e-15 79.7
MS.gene049230.t1 AT1G76950 32.065 184 101 5 249 418 234 407 2.45e-15 79.0
MS.gene049230.t1 AT4G14368 28.846 364 219 11 68 415 271 610 2.21e-25 109
MS.gene049230.t1 AT4G14368 27.628 333 206 10 39 352 294 610 6.60e-24 105
MS.gene049230.t1 AT4G14368 26.537 309 164 11 138 415 230 506 1.08e-18 89.4
MS.gene049230.t1 AT4G14368 31.818 198 118 5 225 417 261 446 2.97e-18 87.8
MS.gene049230.t1 AT4G14368 34.545 165 98 4 39 201 463 619 1.28e-14 76.6
MS.gene049230.t1 AT1G65920 27.072 362 233 8 5 352 240 584 2.41e-25 109
MS.gene049230.t1 AT1G65920 28.378 296 164 8 139 415 214 480 1.22e-22 101
MS.gene049230.t1 AT1G65920 26.478 389 234 10 48 415 227 584 2.27e-20 94.4
MS.gene049230.t1 AT1G65920 33.668 199 115 5 224 419 236 420 2.76e-17 84.7
MS.gene049230.t1 AT1G65920 27.072 362 233 8 5 352 286 630 3.46e-25 108
MS.gene049230.t1 AT1G65920 28.378 296 164 8 139 415 260 526 1.42e-22 100
MS.gene049230.t1 AT1G65920 26.478 389 234 10 48 415 273 630 2.58e-20 94.4
MS.gene049230.t1 AT1G65920 33.668 199 115 5 224 419 282 466 2.97e-17 84.7
MS.gene049230.t1 AT4G14368 28.846 364 219 11 68 415 269 608 3.78e-25 108
MS.gene049230.t1 AT4G14368 27.628 333 206 10 39 352 292 608 9.46e-24 104
MS.gene049230.t1 AT4G14368 26.537 309 164 11 138 415 228 504 1.57e-18 88.6
MS.gene049230.t1 AT4G14368 31.818 198 118 5 225 417 259 444 3.56e-18 87.8
MS.gene049230.t1 AT4G14368 34.545 165 98 4 39 201 461 617 1.17e-14 76.6
MS.gene049230.t1 AT4G14368 28.846 364 219 11 68 415 264 603 3.81e-25 108
MS.gene049230.t1 AT4G14368 27.628 333 206 10 39 352 287 603 8.85e-24 104
MS.gene049230.t1 AT4G14368 26.537 309 164 11 138 415 223 499 1.63e-18 88.6
MS.gene049230.t1 AT4G14368 31.818 198 118 5 225 417 254 439 3.50e-18 87.8
MS.gene049230.t1 AT4G14368 34.545 165 98 4 39 201 456 612 1.19e-14 76.6
MS.gene049230.t1 AT4G14368 28.846 364 219 11 68 415 271 610 3.85e-25 108
MS.gene049230.t1 AT4G14368 27.628 333 206 10 39 352 294 610 9.82e-24 104
MS.gene049230.t1 AT4G14368 26.537 309 164 11 138 415 230 506 1.72e-18 88.6
MS.gene049230.t1 AT4G14368 31.818 198 118 5 225 417 261 446 3.83e-18 87.4
MS.gene049230.t1 AT4G14368 34.545 165 98 4 39 201 463 619 1.20e-14 76.6
MS.gene049230.t1 AT3G15430 28.881 277 164 6 56 317 205 463 2.13e-24 105
MS.gene049230.t1 AT3G15430 27.072 362 230 13 66 417 110 447 6.06e-18 86.3
MS.gene049230.t1 AT3G15430 28.881 277 164 6 56 317 205 463 2.13e-24 105
MS.gene049230.t1 AT3G15430 27.072 362 230 13 66 417 110 447 6.06e-18 86.3
MS.gene049230.t1 AT3G15430 28.881 277 164 6 56 317 205 463 2.13e-24 105
MS.gene049230.t1 AT3G15430 27.072 362 230 13 66 417 110 447 6.06e-18 86.3
MS.gene049230.t1 AT3G15430 28.881 277 164 6 56 317 205 463 2.13e-24 105
MS.gene049230.t1 AT3G15430 27.072 362 230 13 66 417 110 447 6.06e-18 86.3
MS.gene049230.t1 AT3G15430 28.881 277 164 6 56 317 205 463 2.13e-24 105
MS.gene049230.t1 AT3G15430 27.072 362 230 13 66 417 110 447 6.06e-18 86.3
MS.gene049230.t1 AT3G15430 28.881 277 164 6 56 317 205 463 2.13e-24 105
MS.gene049230.t1 AT3G15430 27.072 362 230 13 66 417 110 447 6.06e-18 86.3
MS.gene049230.t1 AT5G11580 29.651 344 174 11 119 415 16 338 2.41e-24 105
MS.gene049230.t1 AT5G11580 27.083 432 212 20 39 401 40 437 1.44e-21 97.4
MS.gene049230.t1 AT5G11580 28.030 396 231 13 66 417 15 400 4.71e-21 95.9
MS.gene049230.t1 AT3G23270 28.571 364 220 11 68 415 252 591 2.51e-24 106
MS.gene049230.t1 AT3G23270 27.492 331 209 9 39 352 275 591 7.90e-23 102
MS.gene049230.t1 AT3G23270 28.333 300 170 9 138 415 211 487 1.34e-19 92.0
MS.gene049230.t1 AT3G23270 31.156 199 120 5 224 417 241 427 2.99e-18 87.8
MS.gene049230.t1 AT3G23270 32.558 172 106 4 39 208 444 607 6.63e-13 71.2
MS.gene049230.t1 AT3G02510 25.868 317 203 11 39 342 10 307 3.49e-24 102
MS.gene049230.t1 AT3G02510 30.851 282 176 9 88 363 7 275 1.12e-23 100
MS.gene049230.t1 AT3G02510 34.921 189 102 6 29 208 107 283 1.20e-18 86.7
MS.gene049230.t1 AT3G23270 28.571 364 220 11 68 415 256 595 3.67e-24 105
MS.gene049230.t1 AT3G23270 27.492 331 209 9 39 352 279 595 1.09e-22 101
MS.gene049230.t1 AT3G23270 28.333 300 170 9 138 415 215 491 1.65e-19 91.7
MS.gene049230.t1 AT3G23270 31.156 199 120 5 224 417 245 431 3.34e-18 87.8
MS.gene049230.t1 AT3G23270 32.558 172 106 4 39 208 448 611 7.59e-13 71.2
MS.gene049230.t1 AT3G55580 31.387 274 155 7 159 412 220 480 7.98e-24 103
MS.gene049230.t1 AT3G55580 29.070 258 143 6 120 349 235 480 3.90e-23 101
MS.gene049230.t1 AT3G55580 26.715 277 164 6 51 299 218 483 1.84e-15 78.6
MS.gene049230.t1 AT3G55580 32.061 131 87 1 40 168 336 466 1.95e-11 66.2
MS.gene049230.t1 AT3G02510 26.944 360 204 14 88 418 1 330 3.25e-23 100
MS.gene049230.t1 AT3G02510 40.000 145 85 2 67 210 138 281 1.28e-21 95.5
MS.gene049230.t1 AT3G02510 25.439 342 209 11 39 352 4 327 1.82e-21 95.1
MS.gene049230.t1 AT3G02510 31.795 195 113 7 12 190 139 329 1.97e-16 80.5
MS.gene049230.t1 AT3G26100 29.299 314 194 9 65 365 42 340 7.83e-23 100
MS.gene049230.t1 AT3G26100 26.196 397 249 12 1 363 19 405 3.82e-19 89.4
MS.gene049230.t1 AT3G26100 28.319 226 133 5 177 394 47 251 2.38e-18 87.0
MS.gene049230.t1 AT3G26100 29.299 314 194 9 65 365 42 340 7.83e-23 100
MS.gene049230.t1 AT3G26100 26.196 397 249 12 1 363 19 405 3.82e-19 89.4
MS.gene049230.t1 AT3G26100 28.319 226 133 5 177 394 47 251 2.38e-18 87.0
MS.gene049230.t1 AT3G26100 29.299 314 194 9 65 365 42 340 7.83e-23 100
MS.gene049230.t1 AT3G26100 26.196 397 249 12 1 363 19 405 3.82e-19 89.4
MS.gene049230.t1 AT3G26100 28.319 226 133 5 177 394 47 251 2.38e-18 87.0
MS.gene049230.t1 AT5G16040 27.303 304 192 8 39 330 10 296 9.73e-23 99.0
MS.gene049230.t1 AT5G16040 30.405 296 186 10 88 376 7 289 1.11e-21 95.9
MS.gene049230.t1 AT5G16040 27.018 285 171 7 140 415 7 263 1.83e-17 83.6
MS.gene049230.t1 AT5G16040 41.818 110 62 2 67 175 196 304 2.06e-15 77.4
MS.gene049230.t1 AT3G03790 26.744 344 213 13 39 367 155 474 1.35e-22 101
MS.gene049230.t1 AT3G03790 29.870 231 145 7 139 361 151 372 1.50e-18 89.0
MS.gene049230.t1 AT3G03790 26.744 344 213 13 39 367 158 477 1.37e-22 101
MS.gene049230.t1 AT3G03790 29.787 235 148 7 135 361 150 375 1.01e-18 89.4
MS.gene049230.t1 AT3G03790 26.744 344 213 13 39 367 158 477 1.40e-22 101
MS.gene049230.t1 AT3G03790 29.787 235 148 7 135 361 150 375 9.89e-19 89.4
MS.gene049230.t1 AT3G26100 28.443 334 206 10 65 380 142 460 2.42e-22 99.8
MS.gene049230.t1 AT3G26100 26.196 397 249 12 1 363 119 505 1.71e-18 88.2
MS.gene049230.t1 AT3G26100 28.319 226 133 5 177 394 147 351 2.80e-18 87.4
MS.gene049230.t1 AT3G26100 28.443 334 206 10 65 380 142 460 2.42e-22 99.8
MS.gene049230.t1 AT3G26100 26.196 397 249 12 1 363 119 505 1.71e-18 88.2
MS.gene049230.t1 AT3G26100 28.319 226 133 5 177 394 147 351 2.80e-18 87.4
MS.gene049230.t1 AT3G26100 28.443 334 206 10 65 380 142 460 2.42e-22 99.8
MS.gene049230.t1 AT3G26100 26.196 397 249 12 1 363 119 505 1.71e-18 88.2
MS.gene049230.t1 AT3G26100 28.319 226 133 5 177 394 147 351 2.80e-18 87.4
MS.gene049230.t1 AT3G53830 26.437 261 150 5 120 349 215 464 1.02e-21 97.4
MS.gene049230.t1 AT3G53830 26.166 386 214 11 69 412 108 464 2.99e-19 90.1
MS.gene049230.t1 AT3G53830 37.013 154 90 4 40 190 320 469 1.94e-18 87.4
MS.gene049230.t1 AT3G53830 27.737 274 155 6 58 299 205 467 2.78e-16 80.9
MS.gene049230.t1 AT3G53830 26.054 261 151 5 120 349 243 492 1.46e-21 97.1
MS.gene049230.t1 AT3G53830 28.470 281 148 7 164 412 233 492 4.85e-19 89.7
MS.gene049230.t1 AT3G53830 37.013 154 90 4 40 190 348 497 2.29e-18 87.4
MS.gene049230.t1 AT3G53830 27.737 274 155 6 58 299 233 495 2.78e-16 81.3
MS.gene049230.t1 AT3G02300 29.524 315 162 16 131 415 24 308 2.80e-20 93.2
MS.gene049230.t1 AT3G02300 26.144 306 180 8 39 314 96 385 2.85e-19 90.1
MS.gene049230.t1 AT3G02300 28.797 316 163 15 131 415 13 297 3.38e-20 92.8
MS.gene049230.t1 AT3G02300 26.144 306 180 8 39 314 85 374 3.17e-19 90.1
MS.gene049230.t1 AT1G19880 26.239 343 205 10 39 352 82 405 6.21e-17 83.2
MS.gene049230.t1 AT1G19880 26.744 258 139 8 164 394 47 281 2.03e-11 66.2
MS.gene049230.t1 AT5G60870 28.634 227 145 4 40 260 8 223 5.74e-16 78.2
MS.gene049230.t1 AT5G60870 37.594 133 80 3 39 170 117 247 3.53e-15 75.9
MS.gene049230.t1 AT5G60870 25.726 241 159 6 88 318 1 231 7.37e-14 72.0
MS.gene049230.t1 AT5G60870 29.310 232 127 9 198 417 8 214 6.43e-12 66.2
MS.gene049230.t1 AT5G60870 33.099 142 85 3 69 206 95 230 5.32e-11 63.5
MS.gene049230.t1 AT3G53830 28.507 221 119 4 164 353 233 445 6.03e-14 73.9
MS.gene049230.t1 AT3G53830 23.697 211 121 4 120 299 243 444 9.68e-12 67.0
MS.gene049230.t1 AT3G53830 28.054 221 117 5 58 247 233 442 8.43e-11 63.9
MS.gene049230.t1 AT3G53830 25.767 326 185 8 69 353 108 417 6.44e-14 73.6
MS.gene049230.t1 AT5G11580 28.000 200 110 9 39 212 81 272 3.11e-11 65.1
MS.gene049230.t1 AT5G11580 26.923 312 161 15 131 402 3 287 7.75e-11 63.9

Find 117 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTACTGGTCTCAATGATTT+TGG 0.129541 3.3:-80368409 MS.gene049230:CDS
AATGGCTCTGTGTTTATATT+TGG 0.147980 3.3:-80363314 MS.gene049230:CDS
AAACATACAGCTGCCATTTC+TGG 0.213317 3.3:-80362746 MS.gene049230:intron
CTTGGAGTCTTCTGTTGTTC+AGG 0.218691 3.3:-80362783 MS.gene049230:CDS
ACAAGTTCTGAGGTTGAATT+TGG 0.222412 3.3:+80369502 None:intergenic
AGAACTTGTGCTTTAGGGTT+AGG 0.236843 3.3:-80369488 MS.gene049230:CDS
TAGGATTCTTCAAAAGTTAC+AGG 0.239406 3.3:-80365774 MS.gene049230:intron
ACCTCAGAACTTGTGCTTTA+GGG 0.256155 3.3:-80369493 MS.gene049230:CDS
ACTTGGGGTTCAAATGAAAA+TGG 0.267753 3.3:-80362979 MS.gene049230:CDS
GTGTTTATATTTGGAGATAA+AGG 0.279849 3.3:-80363305 MS.gene049230:CDS
AGATAAAGGGATTGACAAAT+TGG 0.288919 3.3:-80363291 MS.gene049230:intron
AACCTCAGAACTTGTGCTTT+AGG 0.301018 3.3:-80369494 MS.gene049230:CDS
CACCATTGAAATGGCTGCTC+TGG 0.312774 3.3:-80367267 MS.gene049230:CDS
GAAAGAGATTCGCTGCGTTA+TGG 0.321350 3.3:-80369433 MS.gene049230:CDS
GAACTTGTGCTTTAGGGTTA+GGG 0.323519 3.3:-80369487 MS.gene049230:CDS
AAGAATCTTCACATGGGGTT+GGG 0.332061 3.3:-80361201 MS.gene049230:CDS
GCTCACACGCTATTCTTAAC+AGG 0.337662 3.3:-80369299 MS.gene049230:intron
AAAGGTTCAAGGGCCATTCT+TGG 0.349910 3.3:-80362801 MS.gene049230:CDS
TCTGACGATGGACATTCTTC+AGG 0.355764 3.3:-80361158 MS.gene049230:CDS
TTGTTCAGGTTTCTTGTGGC+TGG 0.358645 3.3:-80362769 MS.gene049230:CDS
CGAGATCCTTTATAAGCCTT+GGG 0.368219 3.3:+80363627 None:intergenic
TCGAGATCCTTTATAAGCCT+TGG 0.369767 3.3:+80363626 None:intergenic
AGAAAAGAACTTACCAGAAA+TGG 0.380370 3.3:+80362733 None:intergenic
TCCAAGTATTCCACTTTAGT+TGG 0.385067 3.3:+80367296 None:intergenic
TGTTTATATTTGGAGATAAA+GGG 0.387413 3.3:-80363304 MS.gene049230:CDS
AAAGAGATTCGCTGCGTTAT+GGG 0.389516 3.3:-80369432 MS.gene049230:CDS
GAGGCCTATAGTTGGGGAAC+AGG 0.389709 3.3:-80365838 MS.gene049230:CDS
AGAATCTTCACATGGGGTTG+GGG 0.395285 3.3:-80361200 MS.gene049230:CDS
ATGTGGGGAAAGAATACAAC+TGG 0.396830 3.3:-80367553 MS.gene049230:CDS
TCTGCAAAGCAAACTCTTGA+AGG 0.410034 3.3:+80360723 None:intergenic
ACGATCATTCTCCTCTGAAC+CGG 0.417040 3.3:-80369456 MS.gene049230:CDS
AACGCAGCGAATCTCTTTCC+CGG 0.419591 3.3:+80369437 None:intergenic
GCCAACTAAAGTGGAATACT+TGG 0.420481 3.3:-80367297 MS.gene049230:CDS
AATCATTCCAGTGCAATAAC+AGG 0.427411 3.3:-80368140 MS.gene049230:intron
TCATGTGGTTTCAATCATAC+AGG 0.428947 3.3:-80360678 MS.gene049230:CDS
CAACGGCGATTACGGTAGAT+TGG 0.430515 3.3:-80369408 MS.gene049230:CDS
TGGAGGAGAGGCCTATAGTT+GGG 0.432894 3.3:-80365845 MS.gene049230:CDS
CGCTCCTGTTCCCCAACTAT+AGG 0.433922 3.3:+80365834 None:intergenic
GGTCATGAGTCAAGCATACT+AGG 0.438017 3.3:-80365793 MS.gene049230:CDS
AGTTCCTTTGCCAACTAAAG+TGG 0.444092 3.3:-80367306 MS.gene049230:CDS
ACATTCTTCAGGTGGACAAT+TGG 0.448996 3.3:-80361147 MS.gene049230:intron
TGCCATTCATCTACCTGAAA+AGG 0.451115 3.3:-80362819 MS.gene049230:CDS
GTTGGCAAAGGAACTATGTT+GGG 0.451329 3.3:+80367314 None:intergenic
TGGGGTTGGGGAGGTTCAAA+TGG 0.455759 3.3:-80361188 MS.gene049230:CDS
ATACAGCCCAAGGCTTATAA+AGG 0.456504 3.3:-80363633 MS.gene049230:CDS
GAAGAATCTTCACATGGGGT+TGG 0.457129 3.3:-80361202 MS.gene049230:CDS
TCGGTAATTTGAATTCTCAA+TGG 0.458241 3.3:-80369382 MS.gene049230:CDS
TAGGTAAAATATGTAGCTGC+TGG 0.459735 3.3:-80363484 MS.gene049230:CDS
TCAATATACTCAGCTCTTGA+AGG 0.463549 3.3:-80363197 MS.gene049230:intron
TCAAATGAAAATGGCTGCCT+TGG 0.466319 3.3:-80362970 MS.gene049230:CDS
ACAACTGGGCAGCTTGGACT+TGG 0.468747 3.3:-80367538 MS.gene049230:CDS
CATCTACCTGAAAAGGTTCA+AGG 0.471179 3.3:-80362812 MS.gene049230:CDS
TTATGGGGCAACGGCGATTA+CGG 0.471827 3.3:-80369416 MS.gene049230:CDS
TGGAAGGAGGTGCAAATAGC+AGG 0.475507 3.3:+80369356 None:intergenic
GAGCACTCACTGGCTATTAG+TGG 0.483358 3.3:-80367239 MS.gene049230:intron
GAAAATGGCTGCCTTGGCAT+AGG 0.483375 3.3:-80362964 MS.gene049230:CDS
AATGGATGTGTTTATGCTAC+TGG 0.487639 3.3:-80368424 MS.gene049230:CDS
AGTTGGGGAACAGGAGCGTC+TGG 0.489434 3.3:-80365829 MS.gene049230:CDS
CTGCAAAGCAAACTCTTGAA+GGG 0.492032 3.3:+80360724 None:intergenic
AGTTGGCAAAGGAACTATGT+TGG 0.493703 3.3:+80367313 None:intergenic
AGGTAGATGAATGGCATATG+AGG 0.498045 3.3:+80362826 None:intergenic
AAGAATACAACTGGGCAGCT+TGG 0.498434 3.3:-80367544 MS.gene049230:CDS
AACGGCGATTACGGTAGATT+GGG 0.498822 3.3:-80369407 MS.gene049230:CDS
TCTGGGTTCTGAGCACTCAC+TGG 0.502064 3.3:-80367249 MS.gene049230:CDS
CTGACCTCCGCTTGTACTGA+TGG 0.507686 3.3:-80363457 MS.gene049230:intron
ACCATTGAAATGGCTGCTCT+GGG 0.517239 3.3:-80367266 MS.gene049230:CDS
ATCTTCACATGGGGTTGGGG+AGG 0.520691 3.3:-80361197 MS.gene049230:CDS
AAAGGATCTCGAAGGAATCA+AGG 0.521019 3.3:-80363615 MS.gene049230:intron
GGATGGAATCACCATTGAAA+TGG 0.523654 3.3:-80367276 MS.gene049230:CDS
TATTCCACTTTAGTTGGCAA+AGG 0.528095 3.3:+80367302 None:intergenic
CGATCATTCTCCTCTGAACC+GGG 0.533165 3.3:-80369455 MS.gene049230:CDS
CAATATACTCAGCTCTTGAA+GGG 0.533382 3.3:-80363196 MS.gene049230:intron
ATGGAGGAGAGGCCTATAGT+TGG 0.534204 3.3:-80365846 MS.gene049230:CDS
AAAATGGCTGCCTTGGCATA+GGG 0.536458 3.3:-80362963 MS.gene049230:intron
ACCCAGAGCAGCCATTTCAA+TGG 0.539288 3.3:+80367265 None:intergenic
AAAGTTGTACGGATCTCTGC+TGG 0.539892 3.3:-80368167 MS.gene049230:CDS
AAGTAATCATACAACTGAGT+AGG 0.540327 3.3:+80368360 None:intergenic
ACACAGACCTGTTATTGCAC+TGG 0.543355 3.3:+80368133 None:intergenic
ATTTGGATGATGATGATAAA+CGG 0.544013 3.3:+80369519 None:intergenic
TCTGTTGTTCAGGTTTCTTG+TGG 0.545325 3.3:-80362773 MS.gene049230:CDS
TTTGGTGAACTTTATACTTG+GGG 0.547586 3.3:-80362994 MS.gene049230:CDS
ATGCTTTCAACTCAGGGTCA+TGG 0.549570 3.3:-80360768 MS.gene049230:intron
CAAGCAACTTCTTCAGCGTA+TGG 0.557439 3.3:+80363133 None:intergenic
AGTAATCATACAACTGAGTA+GGG 0.560241 3.3:+80368361 None:intergenic
ACAACAGAAGACTCCAAGAA+TGG 0.564629 3.3:+80362788 None:intergenic
TTCTTTGCTAGATGGAGGAG+AGG 0.567161 3.3:-80365857 MS.gene049230:intron
TGCTATATTTGAGTATGCAT+AGG 0.569565 3.3:-80360655 None:intergenic
ACAGGAGCGTCTGGTAGACT+TGG 0.578671 3.3:-80365820 MS.gene049230:CDS
GACGATGGACATTCTTCAGG+TGG 0.585101 3.3:-80361155 MS.gene049230:CDS
AGGTAAAATATGTAGCTGCT+GGG 0.585430 3.3:-80363483 MS.gene049230:CDS
GAATCTCTTTCCCGGTTCAG+AGG 0.587029 3.3:+80369445 None:intergenic
TTCGCTGCGTTATGGGGCAA+CGG 0.588201 3.3:-80369425 MS.gene049230:CDS
ACTAAAGTGGAATACTTGGA+TGG 0.589055 3.3:-80367293 MS.gene049230:CDS
ATCTACCTGAAAAGGTTCAA+GGG 0.589691 3.3:-80362811 MS.gene049230:CDS
GGCATGAGAAGAAAGTTGTA+CGG 0.591405 3.3:-80368178 MS.gene049230:CDS
AAGAGATTCGCTGCGTTATG+GGG 0.607108 3.3:-80369431 MS.gene049230:CDS
TCAGGGTCATGGAAGTGATG+TGG 0.611297 3.3:-80360757 MS.gene049230:intron
TCAATTACCATCAGTACAAG+CGG 0.614511 3.3:+80363450 None:intergenic
ACCCTAAAGCACAAGTTCTG+AGG 0.618662 3.3:+80369492 None:intergenic
GGAGGAGAGGCCTATAGTTG+GGG 0.620828 3.3:-80365844 MS.gene049230:CDS
AACGTTCAAGCAATTGCTTG+TGG 0.625570 3.3:-80369326 MS.gene049230:CDS
AAAGCATTGCAAGTTTCATG+TGG 0.626884 3.3:-80360693 MS.gene049230:CDS
CATGCAGTGAATACAGCCCA+AGG 0.630068 3.3:-80363643 MS.gene049230:intron
ATGATTACTTGTCAAGACAC+AGG 0.632778 3.3:+80363096 None:intergenic
GATTACGGTAGATTGGGTCT+CGG 0.634070 3.3:-80369401 MS.gene049230:CDS
GCGTCTGGTAGACTTGGTCA+TGG 0.636935 3.3:-80365814 MS.gene049230:CDS
AATATACTCAGCTCTTGAAG+GGG 0.650688 3.3:-80363195 MS.gene049230:intron
TGGATGGAGAACTGTACATG+TGG 0.655493 3.3:-80367570 MS.gene049230:CDS
GGAAGTTCACTGATCAACGA+TGG 0.660463 3.3:+80363154 None:intergenic
AGGCTTATAAAGGATCTCGA+AGG 0.668316 3.3:-80363623 MS.gene049230:CDS
GTTCAAGCAATTGCTTGTGG+TGG 0.671066 3.3:-80369323 MS.gene049230:CDS
GCTGAAGAAGTTGCTTGTGG+TGG 0.674243 3.3:-80363127 MS.gene049230:CDS
TACGCTGAAGAAGTTGCTTG+TGG 0.677233 3.3:-80363130 MS.gene049230:CDS
GGATGGAGAACTGTACATGT+GGG 0.711238 3.3:-80367569 MS.gene049230:CDS
ATTACCATCAGTACAAGCGG+AGG 0.713610 3.3:+80363453 None:intergenic
TGTGGGGAAAGAATACAACT+GGG 0.744466 3.3:-80367552 MS.gene049230:CDS
GATGGAGAACTGTACATGTG+GGG 0.759152 3.3:-80367568 MS.gene049230:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr3.3 gene 80360656 80369549 80360656 ID=MS.gene049230
chr3.3 mRNA 80360656 80369549 80360656 ID=MS.gene049230.t1;Parent=MS.gene049230
chr3.3 exon 80369300 80369549 80369300 ID=MS.gene049230.t1.exon1;Parent=MS.gene049230.t1
chr3.3 CDS 80369300 80369549 80369300 ID=cds.MS.gene049230.t1;Parent=MS.gene049230.t1
chr3.3 exon 80368372 80368448 80368372 ID=MS.gene049230.t1.exon2;Parent=MS.gene049230.t1
chr3.3 CDS 80368372 80368448 80368372 ID=cds.MS.gene049230.t1;Parent=MS.gene049230.t1
chr3.3 exon 80368141 80368219 80368141 ID=MS.gene049230.t1.exon3;Parent=MS.gene049230.t1
chr3.3 CDS 80368141 80368219 80368141 ID=cds.MS.gene049230.t1;Parent=MS.gene049230.t1
chr3.3 exon 80367533 80367592 80367533 ID=MS.gene049230.t1.exon4;Parent=MS.gene049230.t1
chr3.3 CDS 80367533 80367592 80367533 ID=cds.MS.gene049230.t1;Parent=MS.gene049230.t1
chr3.3 exon 80367240 80367341 80367240 ID=MS.gene049230.t1.exon5;Parent=MS.gene049230.t1
chr3.3 CDS 80367240 80367341 80367240 ID=cds.MS.gene049230.t1;Parent=MS.gene049230.t1
chr3.3 exon 80365775 80365868 80365775 ID=MS.gene049230.t1.exon6;Parent=MS.gene049230.t1
chr3.3 CDS 80365775 80365868 80365775 ID=cds.MS.gene049230.t1;Parent=MS.gene049230.t1
chr3.3 exon 80363616 80363658 80363616 ID=MS.gene049230.t1.exon7;Parent=MS.gene049230.t1
chr3.3 CDS 80363616 80363658 80363616 ID=cds.MS.gene049230.t1;Parent=MS.gene049230.t1
chr3.3 exon 80363458 80363503 80363458 ID=MS.gene049230.t1.exon8;Parent=MS.gene049230.t1
chr3.3 CDS 80363458 80363503 80363458 ID=cds.MS.gene049230.t1;Parent=MS.gene049230.t1
chr3.3 exon 80363292 80363338 80363292 ID=MS.gene049230.t1.exon9;Parent=MS.gene049230.t1
chr3.3 CDS 80363292 80363338 80363292 ID=cds.MS.gene049230.t1;Parent=MS.gene049230.t1
chr3.3 exon 80363104 80363206 80363104 ID=MS.gene049230.t1.exon10;Parent=MS.gene049230.t1
chr3.3 CDS 80363104 80363206 80363104 ID=cds.MS.gene049230.t1;Parent=MS.gene049230.t1
chr3.3 exon 80362964 80363018 80362964 ID=MS.gene049230.t1.exon11;Parent=MS.gene049230.t1
chr3.3 CDS 80362964 80363018 80362964 ID=cds.MS.gene049230.t1;Parent=MS.gene049230.t1
chr3.3 exon 80362747 80362850 80362747 ID=MS.gene049230.t1.exon12;Parent=MS.gene049230.t1
chr3.3 CDS 80362747 80362850 80362747 ID=cds.MS.gene049230.t1;Parent=MS.gene049230.t1
chr3.3 exon 80361148 80361227 80361148 ID=MS.gene049230.t1.exon13;Parent=MS.gene049230.t1
chr3.3 CDS 80361148 80361227 80361148 ID=cds.MS.gene049230.t1;Parent=MS.gene049230.t1
chr3.3 exon 80360656 80360775 80360656 ID=MS.gene049230.t1.exon14;Parent=MS.gene049230.t1
chr3.3 CDS 80360656 80360775 80360656 ID=cds.MS.gene049230.t1;Parent=MS.gene049230.t1
Gene Sequence

>MS.gene049230

ATGTGGCACCGTTTATCATCATCATCCAAATTCAACCTCAGAACTTGTGCTTTAGGGTTAGGGTTTCTTAGACGATCATTCTCCTCTGAACCGGGAAAGAGATTCGCTGCGTTATGGGGCAACGGCGATTACGGTAGATTGGGTCTCGGTAATTTGAATTCTCAATGGAAACCTGCTATTTGCACCTCCTTCCATAATCAAAACGTTCAAGCAATTGCTTGTGGTGGTGCTCACACGCTATTCTTAACAGGTTCACTTTCTCTATCTCCCTTCCTTCCACTTCCATTTTCCATTTCATTATTCTTATTTTTTTCTTCTTCTTTCAATTCGGTTGAGATCGATTGATTCCTTCCTCGCTTGATCAATGATGTATTTAGTATTTGATGGTCTTAAATATATGCAAATGTTAACTATCTTTATCATATTTACTGCTATTATTCCTAAATTACCCTTCATCCTATGTTTGGTTTCATGTGAAATTGATTTGAGTTTTAACATTTTCAGTTGCTCTTGAGTAGAATTGATTTTCCCTCTACATTTGATTCTAACTTGAAGTTTGAATTTGTAGCTTTTGAGTTTAAACGTGATTCTTACACTGAAATTTATCATTCAACTCACTTTTATGTAAATGTATACAAACATTAGTCATTTTACATTCAACTCACTTTTAAAGCAAAATCAGTTTTTCAAAATAAATTTTTGTTACTGCAGAACCAAACATGCACATAGATTTTATTTTTCAATTATTTTTTTGTTCTAATGGAATCCATAAGGCGCAATTTAGAAAATATAAATTTTTTTTTGGTTGCTTTGAGACATGTAAAGTAACCCGAGGGAGTACTGTCTATCAAGTATAAAATTTTTGTTATTATTCTAAGTGGTTGTGTAATTTTATGAGAATTGATCGGTTGATTTTTTTTTTTTGGGGTTCCTTGGAATGTCTATGGTTTCGAGGTTGCTTGCTTATTTTAGTAACAGTTTTCTTTATGCCACTGGATGGCTACAATGTGGCAGTCTTTGAAATTGGTGATGAGTCTGGTGACTATTGAAGAGTCTCTGTAATGTTAGAGTAGGGGCTTACAAATTGTACTCCTTTCACAGACAATGGATGTGTTTATGCTACTGGTCTCAATGATTTTGGACAGCTCGGTACATCGGAGAGTAAACCCTACTCAGTTGTATGATTACTTCGCCTTTTTTCCTGTATCTTTGTCAAGTAAACCGATGACAGTTGCAACATCTTGTTCTTTTGCTCTAGTGTTCATGAGTGCGTTACTTGCCAGCATTTTCTTGTTTTCGGTATTTTATTCACTTGTTTATAATGTTTCAGGTGCCACTTCAAGTTTTTGGGCATGAGAAGAAAGTTGTACGGATCTCTGCTGGTTATAATCATTCCAGTGCAATAACAGGTCTGTGTTTATGGATACCATTGTCATTCATCCCAATAATAACAAGCTTTGGCCCTCGATAACTTTTATTTGAAGTTGACTGATGTTTTCCCCTTCAGAATAAATATTTTATAACTTACGTTTTTTCAAGAAAAAGGGAAATATAGTATGTGACTGGTTAAGAAATCCGTTGTTGAACACATTGCAATAAGTTAATCTTAATCTAATAGTAGGTTCACCAAGAAGCTATTGTCCAAAACCATATATCTATATCATATCAATATAAGAAGTCATCAATTAATTACTACTTTTTTTATTATAAGTAACTAGTAGTTGGATTGTTGAAAAGCAAAAATTGTACAGATGCTTGATTTCAATTTGTTCTGAGCTTATATTGTTTTGGCATGTATAGATTAGTTACCAGAGGCTGCTTAGTGCTTTTATTTTTTGTTTATTCCTTTTAAAGCTATTAGTATTATTTGTTAATGCGTTTTACGTTGTGAATTTCTGCACATTCTATAACTTATTGTTTTTAAACAGAATTCTCTCTCTCCCTTTCTTACTTGCAGTGGATGGAGAACTGTACATGTGGGGAAAGAATACAACTGGGCAGCTTGGACTTGGAAAAAGTAAGAACTAGACCTTGTTTTAGCATTTTGACAAGTTGAAGAGCTTTTTTCCACTGAAACTAATAATATTATATGATTTATAAAAATGGGTACTATACTACTATTAGTAATAGAATCCCCTATAGCTGATAAGGTTGGCTGGTGGAAAGTGGAAACTACTATGAGTATAATGTCATTTTACTTACATGCAGAGGCTCCCAACATAGTTCCTTTGCCAACTAAAGTGGAATACTTGGATGGAATCACCATTGAAATGGCTGCTCTGGGTTCTGAGCACTCACTGGCTATTAGTGGTATGCAATAAACAATCATAATTTTAATTCATATTAGTTGCTGATGCTAATTTATCTATTTTGTTCCTTTTTGTAATATTTTTTTATTTTTTAGATTAATTATTTATATAGTCTTGAGCTACAGAAGAATAGCGATGGGATAGGTCAGAAAAAATGATATATCCCAATTTAAAATTTACAGGTTTCAGATTGAAAAAGAGAGAAGAGATTTTGAATAAATGGTCGGCATATGAAATTAATCGGGCAAATTACAATGTGATATGAAAGGCAGAAAAACAATCCCTATTTATATTGGGAATCTGGTCAAATTGACTCCCAAAGAATGTAACCCTAATACTAATCAAACAAAGAAAAACTTCAATGAAAATCCCAAAGAATAATTTTCTGTTTATTATAAGATATGTAAAAATAAGCTAACACAATTATTCCTCAAAAAAAAATTATTTCTAAAATGAAATAAATTTTCCTCATCTATTATGTGCATCATTCTCTCCCTTTGAGATACAGTACAGATAATTAAACTATCACTATCCAAAACACACAATTTTTAGACAGGGTGTATTTTGCTTAAGAATTAGGATTACATTGTAATTCCGTGTAAATTGAGACTATTTTGGGGCAGTCCTTCAAAAAATGCATGAAAAATCCCTGGAATGGAAGATATGAAATTAATAATGGTAAATTGGTAACAACATACTTAGATCTATAAAACATTAGAATGAGCTTAGCTGTAAGAAAACTAGAATATCAATATGATTTTATCTTTATATCTAGCTTTAGTTGATGCTTTGACATCCTGTATTATTTGACTTAGTTTTGTAAGATAATTCCAGGGATCATCTGACAGCAACTTAGAACTACCCTCAAAACTTGAAGGTGATTAACATGAGAAAGATGGTTGCATTGTTTTTCGAATCAAGTTCTCTTACAGTAAAACTAAGACCCTTTCAGAAAGTATAGTATACAAGTGGAATAAAAATTTAGATCACGCTTAATTGTGATTATTAAAGTGTAAAGTGATTTTCAAAGAAATCTTACAGATGAGGTCTCATAGCTATTTCAAAAAAAGAGTAACGCAATCAAGCAAACATCTACACATTCTGAATACAATACGTAAGTCTTAAATCAGTGAAGAATGCATATGCTAGTGCTACATGAATGTTCTGTCTATACCGGGCTTATGAACTTCAAGCTAAAAGAGCTTTTGTATGATGGCCTTGGTAATAATGAGATAATGTATGAAATATAACCAATTACCAGGCACAGACCTTGTTGCTTAAACTTTTAGGATCCAATGGTATTTGACAATGTGGATTCTCTTCATGATATATATTACTTGAGCTTGTTGCTTAAACGTTATTTCTTTGCTAGATGGAGGAGAGGCCTATAGTTGGGGAACAGGAGCGTCTGGTAGACTTGGTCATGGTCATGAGTCAAGCATACTAGGATTCTTCAAAAGTTACAGGTTTTTTTTTTGCTTCTTTTCTTTTAAAATTTTTAGCTGCATTAATCTGTATTTATGTTTTATTATTACACTTTACCCCCGTATGATTTTTTCCCAAAATACTTTGCCACCTCATGGTATAAAATCTAAGACTTACCCCCTTTGTGCTCAGCCCCATTAAATGTTTTAAATTAAAACATAGCATTGTACTATTTTTTCTCTTTTTTCAATATAATTTATAATTGGAACATACTAAAAACCACCAATTTTTCTTTTCGTCTTTCATTCTCCCAGATCAAGTGAGCATCCATTTTTCCACCTTTTCTGCTATCCTCCACTCATTAGAGAAGTTTGGAGAGTTTTTGAAAATTACATCTAATATATTTCATTTTTGCATTAGAGTAAAACCCAAACTATAGCACCGTCGTTCATTTTGGAAAAAATGCTGTTGAGCATATTGGGCTTGGAGTTGCCTATAGCGATTTCCATTTGTATAACCGCATGCAGATCTCCTCTATACATTCATGGTTAACGTTTGAGACAAATTGATTAACTGTAAACACTAAAGAAATAGGAGATGCAGTAAAAAATGTAACATTAATCAAGACCCGTTAATTTAAATATAGATCAAGAAAATTCTAATAGATAATTAAGCTTATGTAGAGCACAAGGCTGTTTAAATTTATACAAAATTTTAGACACAAAAAACCAGTAGTCTCCAGGAATCCTTTTCCCCCTTCCGCGTAAGAATGTCTTGGGCTTGTTTAGTTTCAATTTAAAAAAAAAAACATATTATGTTTTTAGTTCAATTATAAAAATGTCATTGACACCTTATTTTCAAAGTTTTGTAGCAGCAGTTAAGACGAGAATTTTTTTTTTTTGTTAGAGTAATTCAGAATAGCTAGCTTGCAGTTCAGTTGGGTAACTTACAATTATTCAGTTGTAGAAGTGGTTCGGACCACCTCATTGTAAATACTGCACTGTGTAGTGTGTACACAGGTTCTCAATCAATGAAATCATTTTTCAGATTCAGCAATACATACTATCTTTAAATTCTCTCTTCTAGAAAGTTTGCATGCTATTACATTGCTAAGATCAATGACTGCAGAAAACCCCAAACTTCCTACTCCACCGCCCTAACCACCACTACCACTCAACCCACATATTTGGTTCCACTTCAGTTGGACCACATCCTTCAATCTCCTCAACTTCTTCTCTACAGTGCTTTGGAGATCTGCAAAAGTTATATTGATTCGCCATTCTCTTATAAGAACTGTTGCCCTTTAGCCTAATTACCTGCCCATCTTGAAAGAAAACAATGAACATTGCTTTTCAGTAGTTATAACCATCCCCAAAGTTTCCAACCACACTATACCGAAAATTGCATCCACTACTATGAAATATAGCAGAAATTTAAATCTATCAATTCAGAAAGGATTTAAAAGAAAGAAAAAATGCTTGTAGCTTTTACCCAATGGAAATACAAAAGTGAATGTGACACTGTTATAAAATGAAGTGTGCATTCTGCACTTGTTATATTAGACAAAGTTTCAACATCCACAACTATTTTGACTATGGTTCTAATATTGAGATCTATTTTATTTTCACCTTTGTTAGTCCAAGTTTCAACATCAACAACAATTTTGACTATAACTCTATTGTGTTGAAAACCCGCCTTGATTAAAGATAAGGTTTATAAGGTTGAGTCAGGTCTCACCTTGCAAGCCAAATTTGTAGGGTTGAGTGAGATCCTAAGCTCAAGATGAAAATGGAATATAGTCTATCTGAGATCTGTTATTGTGTCATGATCTCTGTTATTCCACACGCTTTGTCCACACCCCAGATGTCCAGTCCTGTCCTGGGCATCATGGGGTGTGTTGAGATCCTGTTGTTCCTTCGTATTAGTTCAGGCTTTATAAGTCTATCCATAATCTTTAAAAGGCATGTTGAAAGTTCAATATTGACTAGAGATATGGCCTAAGTAGTTCTTATAAGGCTTGGACAGTCCTAGCCTTACCAATCAGTTTTGTTGGGTTGAGTTAGACCCTAAATCCAAATTCTAAGAGATTAATTGTAAGCTAACCATACTTTTCAATTTATGTAGATCTATAATAATGTATTTTTTGAAATCATGCAGTGAATACAGCCCAAGGCTTATAAAGGATCTCGAAGGAATCAAGGTGTGATGTTAAATTTACTGCCTGGTTGTTTCTTATATAAGGTTGATAAATTTATTTCAAACTTGTTATTTATCACCTATGTATTTTGGCTTCATTCTTGAAATATTTATAGGTAAAATATGTAGCTGCTGGGATGCTGACCTCCGCTTGTACTGATGGTAATTGAATTTAATTATATCTTTATTTTTTTTTTTCTACTTTCTCGTTCATACCTTTGGTTGTACATCTGCATTTGGAATTAATCTTTGATTTTTGCTCTAACATGCAATTCGTGCAGAAAATGGCTCTGTGTTTATATTTGGAGATAAAGGGATTGACAAATTGGTAGGTGCAATCGGTATAAATCATTATTTTTTCTCCTCTGCTACTACTTGTAATGACAGATATTTTCTTCAATCAATATACTCAGCTCTTGAAGGGGACGAGCAATACAACAAAACCATCGTTGATCAGTGAACTTCCATACGCTGAAGAAGTTGCTTGTGGTGGCTATCATACCTGTGTCTTGACAAGTAATCATCAAGTTCTGAACTTACACATGTGTTGATTTGTGATAATTTGTTTACTGCTTCATTCTATTTGGTGTTTGTTGTATAGATTTTGGTGAACTTTATACTTGGGGTTCAAATGAAAATGGCTGCCTTGGCATAGGGTATCCTTTTTATTCTTAAAACTTGTTACTTTGTCTTTCTCATTTTCTACATTTCCATTCCCTCATTTCTCTTTCTTTCAAGTGTTTTGATTCTTCAAATCATTTTTATCTAGGTCCTCATATGCCATTCATCTACCTGAAAAGGTTCAAGGGCCATTCTTGGAGTCTTCTGTTGTTCAGGTTTCTTGTGGCTGGAAACATACAGCTGCCATTTCTGGTAAGTTCTTTTCTTCGTATAAAAGACAAAGAAGTACCTTACGTTAAGTGCTTTTTCTTGTTAATTTTTTTTTGGTAACATAAAAAAAAATAGGTGAATGCATGCTTTTCTTTTCTCTTATTATCATAAAAGATTGTTTCATCAAGATGGACAAGGCATCAAACAAAGCAACACAAGAATATTGATATTGAGTATGTGTCTGATAGTTTTGATGTTTTATAGGAACCCTGTGTCATCATGATAAAGAAAAATTCATTTGCGAGAATATGAAAGACTTAGCAAAACGATGGTAAGGTAATAATTAAGATGTAACAAGCGTGTCTTGGCAGAACAATAGTACGGGAATCCGTAAGATGTAACAAGCATGTCGTTTGTAGTAACATAGTCACCCCTAGCAAGTTTCTAAAAAGAATTTTATGTGTTAAAAAAATAATTGCCGTAAATGAGCGAAAGAATGTATCATCATCTTTCAAGAAAAAATTGTGGACTGATTTTGAAGGCTAACATTAAGAGTGTCATTCATGACATTGTATTAAAGAGTGAAATCTAGAGAAAAGAGAACTTTCGCAAAAAATGAGATTGGCATTTCTCTGATCAGCATGAGAAAATAACTTTCTGGGCATCAAACGTGATTCACTATTTCACATGAGAGAGCGAATATATGGCTGGAAACATAAAACACTTGCAATCCCCATAAAATTCAACCATGTTGGTTTAAATCGCATTAAAAGTTTTGGCAGTACTATTGAAATCTACCTATAGTCCTTTGTGAACTGGGATTGCTGAAACGCCTGTATACGGTTCACACTTCTTATATATTTGGATCAATGCATCTCTTTTTTTCCCAACCTCTTTTTCCATAAAAGAAAAGAAAAACATCTCTTTCAATATTCTCATATACGAACTACCAATGAGTGATTCTACTGACAGCCATGGAACATGTCAGAAAATTTAGGTGCTATATCTTCAAGTTATATTGCTTCTTACACTTGTCTAATAGGCAATTAGTTAATTGAATTTAGGAATGAGGAAGTTTGGACTTAAAGAACTTTATAGGTTTCTTGCCTCTTGGAGAATTTCAGCCTTTTATTTATTTAGAGTATTTGTTGGTGGCTTACTTGCATGAGTCTGGGTTTTTTAGAAACCACGACAACACTGCACGACTACTAGATGCCACTAATGGTAGCTTCACAATATCACATCCATTTTTGCCTTGGGATGCGATAATTCTGACTCCACCGCACATCCCTGTGCGTAAACTGGGATAGCCTTCATGGATTTCTGCACAAAGCTGCAGGCTTTGCATGGAGATATAATCACCTTTTCCCATTGTAACATATGGATGACCCCTTCCATTATTCCTTTTTGTTAATTTTTTTTCCTTCATTTAAATTCATTTAATATTTAACTTACTCTCACTTTTAAGACTTGATGTGTATACTTTATACTGTATTGGTAGTTGTGAGATAAAAGGATTTTATTGCTGCCGTCTATGCTGAAATTTTTCGTTGATTTTCAGGGGGAAGAATCTTCACATGGGGTTGGGGAGGTTCAAATGGAACTTTTTCTGACGATGGACATTCTTCAGGTGGACAATTGGTATGCTTCTGTTTGTTATAATTTATGACTTCATGTATTTTTAAGTGTTAATCGAGAGACGGTTATCACAATGGTCAGGATGTCGTATTCTATGACAAGTCCTCTGACAGGAGAACCAAAAAAATTGTTTAGAGTAGCAAGGCATTTTATATAATTAATCACAATTTTTCAAATAAAAACGACCACCCATACACTTAGAAACTTTCTTCATATTAATTTAGGAGTCACATTTGCTTAGGAGTGTGGTCAGTTTGATTAGTGGGCCAGGTGCAATACCTAGATAAATTTGATTAGTTTCTTGCCTTTGATTTTGCAAAGTATACAATTTCCTGCGCTGCAGTACTATAAATGAAACTTATGCTTTCAACTCAGGGTCATGGAAGTGATGTGGATTATATAAACCCTTCAAGAGTTTGCTTTGCAGAAGACGTGAAAGCATTGCAAGTTTCATGTGGTTTCAATCATACAGGTGCTATATTTGAGTATGCATAG

Protein sequence

>MS.gene049230.t1

MWHRLSSSSKFNLRTCALGLGFLRRSFSSEPGKRFAALWGNGDYGRLGLGNLNSQWKPAICTSFHNQNVQAIACGGAHTLFLTDNGCVYATGLNDFGQLGTSESKPYSVVPLQVFGHEKKVVRISAGYNHSSAITVDGELYMWGKNTTGQLGLGKKAPNIVPLPTKVEYLDGITIEMAALGSEHSLAISDGGEAYSWGTGASGRLGHGHESSILGFFKSYSEYSPRLIKDLEGIKVKYVAAGMLTSACTDENGSVFIFGDKGIDKLLLKGTSNTTKPSLISELPYAEEVACGGYHTCVLTNFGELYTWGSNENGCLGIGSSYAIHLPEKVQGPFLESSVVQVSCGWKHTAAISGGRIFTWGWGGSNGTFSDDGHSSGGQLGHGSDVDYINPSRVCFAEDVKALQVSCGFNHTGAIFEYA