Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051535.t1 | XP_013465872.1 | 98.7 | 149 | 2 | 0 | 1 | 149 | 1 | 149 | 1.90E-76 | 295 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051535.t1 | A0A072VER7 | 98.7 | 149 | 2 | 0 | 1 | 149 | 1 | 149 | 1.4e-76 | 295.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049151 | MS.gene051535 | 0.809348 | 1.98E-50 | -1.69E-46 |
| MS.gene049378 | MS.gene051535 | 0.822488 | 2.31E-53 | -1.69E-46 |
| MS.gene049758 | MS.gene051535 | 0.808517 | 2.98E-50 | -1.69E-46 |
| MS.gene050128 | MS.gene051535 | 0.802762 | 4.81E-49 | -1.69E-46 |
| MS.gene050226 | MS.gene051535 | 0.804982 | 1.66E-49 | -1.69E-46 |
| MS.gene050228 | MS.gene051535 | 0.803918 | 2.77E-49 | -1.69E-46 |
| MS.gene050623 | MS.gene051535 | -0.834275 | 3.29E-56 | -1.69E-46 |
| MS.gene050642 | MS.gene051535 | 0.811616 | 6.41E-51 | -1.69E-46 |
| MS.gene050762 | MS.gene051535 | 0.831856 | 1.32E-55 | -1.69E-46 |
| MS.gene050763 | MS.gene051535 | 0.831178 | 1.93E-55 | -1.69E-46 |
| MS.gene050987 | MS.gene051535 | 0.82144 | 4.03E-53 | -1.69E-46 |
| MS.gene051535 | MS.gene051983 | 0.827744 | 1.32E-54 | -1.69E-46 |
| MS.gene051535 | MS.gene052077 | 0.80117 | 1.02E-48 | -1.69E-46 |
| MS.gene051535 | MS.gene052426 | 0.83686 | 7.30E-57 | -1.69E-46 |
| MS.gene051535 | MS.gene053073 | 0.816804 | 4.58E-52 | -1.69E-46 |
| MS.gene051535 | MS.gene05316 | 0.813704 | 2.24E-51 | -1.69E-46 |
| MS.gene051535 | MS.gene053494 | 0.81527 | 1.01E-51 | -1.69E-46 |
| MS.gene051535 | MS.gene054379 | 0.839717 | 1.34E-57 | -1.69E-46 |
| MS.gene051535 | MS.gene054930 | 0.817303 | 3.54E-52 | -1.69E-46 |
| MS.gene051535 | MS.gene05510 | 0.825405 | 4.77E-54 | -1.69E-46 |
| MS.gene051535 | MS.gene055441 | 0.80213 | 6.49E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene055701 | 0.829965 | 3.83E-55 | -1.69E-46 |
| MS.gene051535 | MS.gene056979 | 0.826587 | 2.50E-54 | -1.69E-46 |
| MS.gene051535 | MS.gene057750 | 0.802494 | 5.46E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene057754 | 0.80779 | 4.26E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene058146 | 0.820021 | 8.54E-53 | -1.69E-46 |
| MS.gene051535 | MS.gene058435 | 0.924543 | 6.12E-90 | -1.69E-46 |
| MS.gene051535 | MS.gene058595 | 0.809855 | 1.54E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene059899 | 0.810513 | 1.11E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene060084 | 0.836253 | 1.04E-56 | -1.69E-46 |
| MS.gene051535 | MS.gene060297 | 0.809238 | 2.09E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene060495 | 0.815798 | 7.69E-52 | -1.69E-46 |
| MS.gene051535 | MS.gene060683 | 0.822205 | 2.68E-53 | -1.69E-46 |
| MS.gene051535 | MS.gene060685 | 0.810434 | 1.16E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene060998 | 0.806734 | 7.12E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene063021 | 0.809232 | 2.09E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene063544 | 0.816266 | 6.04E-52 | -1.69E-46 |
| MS.gene051535 | MS.gene063876 | 0.824668 | 7.13E-54 | -1.69E-46 |
| MS.gene051535 | MS.gene064293 | 0.801281 | 9.69E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene064937 | 0.813121 | 3.00E-51 | -1.69E-46 |
| MS.gene051535 | MS.gene06503 | 0.826169 | 3.14E-54 | -1.69E-46 |
| MS.gene051535 | MS.gene066222 | 0.806727 | 7.15E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene066362 | 0.809188 | 2.14E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene066716 | 0.803675 | 3.11E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene066745 | 0.808713 | 2.71E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene067552 | 0.807745 | 4.35E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene067553 | 0.822635 | 2.13E-53 | -1.69E-46 |
| MS.gene051535 | MS.gene067566 | 0.802534 | 5.36E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene067635 | 0.807418 | 5.11E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene068045 | 0.831186 | 1.92E-55 | -1.69E-46 |
| MS.gene051535 | MS.gene06865 | 0.814109 | 1.82E-51 | -1.69E-46 |
| MS.gene051535 | MS.gene069559 | 0.819648 | 1.04E-52 | -1.69E-46 |
| MS.gene051535 | MS.gene069679 | 0.82761 | 1.42E-54 | -1.69E-46 |
| MS.gene051535 | MS.gene070491 | 0.817517 | 3.17E-52 | -1.69E-46 |
| MS.gene051535 | MS.gene070790 | 0.806138 | 9.51E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene071343 | 0.812583 | 3.94E-51 | -1.69E-46 |
| MS.gene051535 | MS.gene071407 | 0.805926 | 1.05E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene072023 | 0.832624 | 8.50E-56 | -1.69E-46 |
| MS.gene051535 | MS.gene072087 | -0.822495 | 2.30E-53 | -1.69E-46 |
| MS.gene051535 | MS.gene072564 | 0.824293 | 8.73E-54 | -1.69E-46 |
| MS.gene051535 | MS.gene072565 | 0.82817 | 1.04E-54 | -1.69E-46 |
| MS.gene051535 | MS.gene073954 | 0.81393 | 1.99E-51 | -1.69E-46 |
| MS.gene051535 | MS.gene074091 | 0.828796 | 7.36E-55 | -1.69E-46 |
| MS.gene051535 | MS.gene074393 | -0.826328 | 2.88E-54 | -1.69E-46 |
| MS.gene051535 | MS.gene08486 | 0.839877 | 1.22E-57 | -1.69E-46 |
| MS.gene051535 | MS.gene08779 | 0.814282 | 1.67E-51 | -1.69E-46 |
| MS.gene051535 | MS.gene08782 | 0.840022 | 1.12E-57 | -1.69E-46 |
| MS.gene051535 | MS.gene09136 | 0.821039 | 4.99E-53 | -1.69E-46 |
| MS.gene051535 | MS.gene09310 | 0.800891 | 1.17E-48 | -1.69E-46 |
| MS.gene051535 | MS.gene09558 | 0.805487 | 1.30E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene20438 | 0.808731 | 2.68E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene20939 | 0.802079 | 6.65E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene21109 | 0.803191 | 3.92E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene21911 | 0.821382 | 4.16E-53 | -1.69E-46 |
| MS.gene051535 | MS.gene22343 | 0.818978 | 1.48E-52 | -1.69E-46 |
| MS.gene051535 | MS.gene22689 | 0.812033 | 5.20E-51 | -1.69E-46 |
| MS.gene051535 | MS.gene22691 | 0.817554 | 3.10E-52 | -1.69E-46 |
| MS.gene051535 | MS.gene22820 | -0.841337 | 5.05E-58 | -1.69E-46 |
| MS.gene051535 | MS.gene24247 | 0.806038 | 9.99E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene25012 | 0.825579 | 4.34E-54 | -1.69E-46 |
| MS.gene051535 | MS.gene25223 | 0.803947 | 2.73E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene25913 | -0.82783 | 1.26E-54 | -1.69E-46 |
| MS.gene051535 | MS.gene26485 | 0.805176 | 1.51E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene26514 | 0.81488 | 1.23E-51 | -1.69E-46 |
| MS.gene051535 | MS.gene26990 | 0.817949 | 2.53E-52 | -1.69E-46 |
| MS.gene051535 | MS.gene27008 | 0.809968 | 1.46E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene27393 | 0.825527 | 4.47E-54 | -1.69E-46 |
| MS.gene051535 | MS.gene27501 | 0.833517 | 5.10E-56 | -1.69E-46 |
| MS.gene051535 | MS.gene27530 | 0.808911 | 2.45E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene28049 | 0.802412 | 5.68E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene28835 | 0.822101 | 2.84E-53 | -1.69E-46 |
| MS.gene051535 | MS.gene28864 | 0.80875 | 2.66E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene29000 | 0.8306 | 2.68E-55 | -1.69E-46 |
| MS.gene051535 | MS.gene29211 | 0.80468 | 1.92E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene29405 | 0.809552 | 1.79E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene29773 | 0.817557 | 3.10E-52 | -1.69E-46 |
| MS.gene051535 | MS.gene29986 | 0.818451 | 1.95E-52 | -1.69E-46 |
| MS.gene051535 | MS.gene31059 | 0.823816 | 1.13E-53 | -1.69E-46 |
| MS.gene051535 | MS.gene31116 | 0.830355 | 3.08E-55 | -1.69E-46 |
| MS.gene051535 | MS.gene31609 | 0.806032 | 1.00E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene32657 | 0.808101 | 3.65E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene32732 | 0.823342 | 1.46E-53 | -1.69E-46 |
| MS.gene051535 | MS.gene33065 | 0.934497 | 3.69E-96 | -1.69E-46 |
| MS.gene051535 | MS.gene33198 | 0.803335 | 3.66E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene33248 | 0.833812 | 4.30E-56 | -1.69E-46 |
| MS.gene051535 | MS.gene34191 | 0.802228 | 6.20E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene34437 | 0.817757 | 2.79E-52 | -1.69E-46 |
| MS.gene051535 | MS.gene34687 | 0.806282 | 8.87E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene35590 | 0.809375 | 1.95E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene35799 | 0.813314 | 2.72E-51 | -1.69E-46 |
| MS.gene051535 | MS.gene35930 | 0.827945 | 1.18E-54 | -1.69E-46 |
| MS.gene051535 | MS.gene36146 | 0.814266 | 1.68E-51 | -1.69E-46 |
| MS.gene051535 | MS.gene36331 | 0.816762 | 4.68E-52 | -1.69E-46 |
| MS.gene051535 | MS.gene37434 | -0.806081 | 9.78E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene39091 | 0.813342 | 2.69E-51 | -1.69E-46 |
| MS.gene051535 | MS.gene39638 | 0.815784 | 7.74E-52 | -1.69E-46 |
| MS.gene051535 | MS.gene40946 | 0.81208 | 5.08E-51 | -1.69E-46 |
| MS.gene051535 | MS.gene41037 | 0.806287 | 8.85E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene42668 | 0.8226 | 2.17E-53 | -1.69E-46 |
| MS.gene051535 | MS.gene42831 | 0.800553 | 1.37E-48 | -1.69E-46 |
| MS.gene051535 | MS.gene43459 | 0.800098 | 1.69E-48 | -1.69E-46 |
| MS.gene051535 | MS.gene43954 | 0.800863 | 1.18E-48 | -1.69E-46 |
| MS.gene051535 | MS.gene44007 | 0.807761 | 4.32E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene45170 | 0.822296 | 2.56E-53 | -1.69E-46 |
| MS.gene051535 | MS.gene45171 | 0.815711 | 8.04E-52 | -1.69E-46 |
| MS.gene051535 | MS.gene45533 | 0.831352 | 1.75E-55 | -1.69E-46 |
| MS.gene051535 | MS.gene46881 | -0.800681 | 1.29E-48 | -1.69E-46 |
| MS.gene051535 | MS.gene47145 | 0.803031 | 4.23E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene47146 | 0.8212 | 4.58E-53 | -1.69E-46 |
| MS.gene051535 | MS.gene49486 | 0.810578 | 1.08E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene49940 | 0.833594 | 4.88E-56 | -1.69E-46 |
| MS.gene051535 | MS.gene50436 | 0.804366 | 2.24E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene52448 | 0.827825 | 1.26E-54 | -1.69E-46 |
| MS.gene051535 | MS.gene52512 | 0.808445 | 3.09E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene53056 | 0.801863 | 7.37E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene53326 | 0.803431 | 3.50E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene55263 | 0.814896 | 1.22E-51 | -1.69E-46 |
| MS.gene051535 | MS.gene55396 | 0.813087 | 3.06E-51 | -1.69E-46 |
| MS.gene051535 | MS.gene55397 | 0.822536 | 2.25E-53 | -1.69E-46 |
| MS.gene051535 | MS.gene55505 | 0.847632 | 1.02E-59 | -1.69E-46 |
| MS.gene051535 | MS.gene56431 | 0.824681 | 7.08E-54 | -1.69E-46 |
| MS.gene051535 | MS.gene56488 | 0.810178 | 1.31E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene57183 | 0.81915 | 1.35E-52 | -1.69E-46 |
| MS.gene051535 | MS.gene57643 | 0.800784 | 1.23E-48 | -1.69E-46 |
| MS.gene051535 | MS.gene57951 | 0.813778 | 2.15E-51 | -1.69E-46 |
| MS.gene051535 | MS.gene58503 | 0.83341 | 5.42E-56 | -1.69E-46 |
| MS.gene051535 | MS.gene58652 | 0.802034 | 6.79E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene58676 | 0.807763 | 4.31E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene58789 | 0.802912 | 4.48E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene59149 | 0.817098 | 3.93E-52 | -1.69E-46 |
| MS.gene051535 | MS.gene59206 | 0.824774 | 6.73E-54 | -1.69E-46 |
| MS.gene051535 | MS.gene59216 | 0.811984 | 5.33E-51 | -1.69E-46 |
| MS.gene051535 | MS.gene59948 | 0.816786 | 4.62E-52 | -1.69E-46 |
| MS.gene051535 | MS.gene61435 | 0.812495 | 4.12E-51 | -1.69E-46 |
| MS.gene051535 | MS.gene62394 | 0.815836 | 7.54E-52 | -1.69E-46 |
| MS.gene051535 | MS.gene62587 | 0.841012 | 6.15E-58 | -1.69E-46 |
| MS.gene051535 | MS.gene62623 | 0.86592 | 4.16E-65 | -1.69E-46 |
| MS.gene051535 | MS.gene62847 | -0.815242 | 1.02E-51 | -1.69E-46 |
| MS.gene051535 | MS.gene63058 | 0.822423 | 2.39E-53 | -1.69E-46 |
| MS.gene051535 | MS.gene63673 | 0.819948 | 8.88E-53 | -1.69E-46 |
| MS.gene051535 | MS.gene64243 | 0.802341 | 5.87E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene64417 | 0.827868 | 1.23E-54 | -1.69E-46 |
| MS.gene051535 | MS.gene65895 | 0.811186 | 7.94E-51 | -1.69E-46 |
| MS.gene051535 | MS.gene66292 | 0.803096 | 4.10E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene66676 | 0.800687 | 1.28E-48 | -1.69E-46 |
| MS.gene051535 | MS.gene68873 | 0.804523 | 2.07E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene68874 | 0.802842 | 4.63E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene68877 | 0.846436 | 2.17E-59 | -1.69E-46 |
| MS.gene051535 | MS.gene68933 | 0.841154 | 5.64E-58 | -1.69E-46 |
| MS.gene051535 | MS.gene68959 | 0.834864 | 2.34E-56 | -1.69E-46 |
| MS.gene051535 | MS.gene69314 | 0.818851 | 1.58E-52 | -1.69E-46 |
| MS.gene051535 | MS.gene69935 | 0.806506 | 7.96E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene70378 | 0.805153 | 1.53E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene70586 | -0.824316 | 8.62E-54 | -1.69E-46 |
| MS.gene051535 | MS.gene70819 | 0.835777 | 1.38E-56 | -1.69E-46 |
| MS.gene051535 | MS.gene71450 | 0.808814 | 2.57E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene71871 | 0.817051 | 4.03E-52 | -1.69E-46 |
| MS.gene051535 | MS.gene71890 | -0.827947 | 1.18E-54 | -1.69E-46 |
| MS.gene051535 | MS.gene72109 | -0.824165 | 9.36E-54 | -1.69E-46 |
| MS.gene051535 | MS.gene73227 | 0.821536 | 3.83E-53 | -1.69E-46 |
| MS.gene051535 | MS.gene74443 | 0.842167 | 3.05E-58 | -1.69E-46 |
| MS.gene051535 | MS.gene74444 | 0.856359 | 3.39E-62 | -1.69E-46 |
| MS.gene051535 | MS.gene74922 | 0.803286 | 3.75E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene75128 | 0.82194 | 3.09E-53 | -1.69E-46 |
| MS.gene051535 | MS.gene75614 | 0.841648 | 4.18E-58 | -1.69E-46 |
| MS.gene051535 | MS.gene75993 | 0.825329 | 4.98E-54 | -1.69E-46 |
| MS.gene051535 | MS.gene76620 | 0.806021 | 1.01E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene76834 | 0.801401 | 9.16E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene78202 | 0.804035 | 2.62E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene78205 | 0.821589 | 3.73E-53 | -1.69E-46 |
| MS.gene051535 | MS.gene78405 | 0.839132 | 1.90E-57 | -1.69E-46 |
| MS.gene051535 | MS.gene78478 | 0.833769 | 4.41E-56 | -1.69E-46 |
| MS.gene051535 | MS.gene78682 | 0.827095 | 1.89E-54 | -1.69E-46 |
| MS.gene051535 | MS.gene79290 | 0.801516 | 8.68E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene79479 | 0.817286 | 3.57E-52 | -1.69E-46 |
| MS.gene051535 | MS.gene80233 | 0.813097 | 3.04E-51 | -1.69E-46 |
| MS.gene051535 | MS.gene80298 | 0.835213 | 1.91E-56 | -1.69E-46 |
| MS.gene051535 | MS.gene80919 | 0.812462 | 4.19E-51 | -1.69E-46 |
| MS.gene051535 | MS.gene81066 | 0.821672 | 3.56E-53 | -1.69E-46 |
| MS.gene051535 | MS.gene81322 | 0.807601 | 4.67E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene81388 | 0.809593 | 1.75E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene81653 | 0.805787 | 1.13E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene81687 | 0.805706 | 1.17E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene81689 | 0.813127 | 3.00E-51 | -1.69E-46 |
| MS.gene051535 | MS.gene82040 | 0.800165 | 1.64E-48 | -1.69E-46 |
| MS.gene051535 | MS.gene82350 | 0.812683 | 3.75E-51 | -1.69E-46 |
| MS.gene051535 | MS.gene82352 | 0.812168 | 4.86E-51 | -1.69E-46 |
| MS.gene051535 | MS.gene82358 | 0.801018 | 1.10E-48 | -1.69E-46 |
| MS.gene051535 | MS.gene82811 | 0.820645 | 6.15E-53 | -1.69E-46 |
| MS.gene051535 | MS.gene82939 | 0.800458 | 1.43E-48 | -1.69E-46 |
| MS.gene051535 | MS.gene82976 | 0.804575 | 2.02E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene82978 | 0.807819 | 4.19E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene84086 | 0.804022 | 2.64E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene84396 | 0.800794 | 1.22E-48 | -1.69E-46 |
| MS.gene051535 | MS.gene84401 | 0.830311 | 3.15E-55 | -1.69E-46 |
| MS.gene051535 | MS.gene84457 | 0.808543 | 2.94E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene87170 | 0.817841 | 2.67E-52 | -1.69E-46 |
| MS.gene051535 | MS.gene88148 | 0.813843 | 2.08E-51 | -1.69E-46 |
| MS.gene051535 | MS.gene88372 | 0.811846 | 5.71E-51 | -1.69E-46 |
| MS.gene051535 | MS.gene89434 | 0.825411 | 4.76E-54 | -1.69E-46 |
| MS.gene051535 | MS.gene90199 | 0.835369 | 1.75E-56 | -1.69E-46 |
| MS.gene051535 | MS.gene90942 | 0.828519 | 8.59E-55 | -1.69E-46 |
| MS.gene051535 | MS.gene92548 | 0.81655 | 5.22E-52 | -1.69E-46 |
| MS.gene051535 | MS.gene92764 | 0.829624 | 4.64E-55 | -1.69E-46 |
| MS.gene051535 | MS.gene93887 | 0.812884 | 3.39E-51 | -1.69E-46 |
| MS.gene051535 | MS.gene93888 | 0.81028 | 1.25E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene93890 | 0.829063 | 6.35E-55 | -1.69E-46 |
| MS.gene051535 | MS.gene94150 | 0.825143 | 5.50E-54 | -1.69E-46 |
| MS.gene051535 | MS.gene95070 | 0.832366 | 9.85E-56 | -1.69E-46 |
| MS.gene051535 | MS.gene95886 | 0.817311 | 3.52E-52 | -1.69E-46 |
| MS.gene051535 | MS.gene96220 | 0.838873 | 2.22E-57 | -1.69E-46 |
| MS.gene051535 | MS.gene96284 | 0.806771 | 7.00E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene97268 | 0.809002 | 2.35E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene97270 | 0.836172 | 1.09E-56 | -1.69E-46 |
| MS.gene051535 | MS.gene98521 | 0.803581 | 3.26E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene98522 | 0.811189 | 7.93E-51 | -1.69E-46 |
| MS.gene051535 | MS.gene98543 | 0.808018 | 3.81E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051535.t1 | MTR_1g014930 | 98.658 | 149 | 2 | 0 | 1 | 149 | 1 | 149 | 8.26e-108 | 303 |
| MS.gene051535.t1 | MTR_3g105340 | 54.839 | 124 | 45 | 4 | 13 | 135 | 11 | 124 | 2.44e-37 | 124 |
| MS.gene051535.t1 | MTR_8g021190 | 46.400 | 125 | 54 | 5 | 20 | 136 | 34 | 153 | 4.21e-30 | 107 |
| MS.gene051535.t1 | MTR_4g125030 | 52.727 | 110 | 44 | 3 | 6 | 113 | 15 | 118 | 5.45e-30 | 105 |
| MS.gene051535.t1 | MTR_4g125010 | 48.649 | 111 | 48 | 3 | 6 | 113 | 17 | 121 | 2.14e-28 | 102 |
| MS.gene051535.t1 | MTR_3g109860 | 37.374 | 99 | 58 | 2 | 13 | 110 | 33 | 128 | 1.63e-17 | 74.3 |
| MS.gene051535.t1 | MTR_1g103550 | 45.070 | 71 | 37 | 1 | 19 | 89 | 5 | 73 | 2.66e-17 | 73.2 |
| MS.gene051535.t1 | MTR_5g006430 | 39.560 | 91 | 49 | 2 | 17 | 107 | 3 | 87 | 3.55e-17 | 72.8 |
| MS.gene051535.t1 | MTR_8g013990 | 31.724 | 145 | 82 | 5 | 1 | 136 | 47 | 183 | 6.58e-16 | 71.2 |
| MS.gene051535.t1 | MTR_2g101140 | 45.455 | 77 | 31 | 2 | 17 | 86 | 63 | 135 | 1.76e-15 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051535.t1 | AT1G72510 | 43.939 | 132 | 57 | 5 | 19 | 136 | 36 | 164 | 7.97e-30 | 106 |
| MS.gene051535.t1 | AT1G72510 | 43.939 | 132 | 57 | 5 | 19 | 136 | 36 | 164 | 7.97e-30 | 106 |
| MS.gene051535.t1 | AT5G20670 | 43.478 | 138 | 63 | 3 | 11 | 136 | 17 | 151 | 1.26e-28 | 103 |
| MS.gene051535.t1 | AT2G09970 | 37.931 | 145 | 71 | 6 | 6 | 136 | 26 | 165 | 4.19e-24 | 92.0 |
| MS.gene051535.t1 | AT1G54095 | 44.037 | 109 | 59 | 2 | 1 | 109 | 1 | 107 | 1.63e-20 | 82.4 |
| MS.gene051535.t1 | AT3G22540 | 37.500 | 120 | 59 | 5 | 13 | 131 | 2 | 106 | 6.24e-19 | 77.0 |
| MS.gene051535.t1 | AT4G14819 | 36.134 | 119 | 59 | 4 | 13 | 131 | 2 | 103 | 1.21e-17 | 73.6 |
| MS.gene051535.t1 | AT2G25780 | 35.537 | 121 | 70 | 4 | 20 | 138 | 39 | 153 | 3.12e-14 | 66.2 |
| MS.gene051535.t1 | AT1G79770 | 70.000 | 40 | 12 | 0 | 17 | 56 | 52 | 91 | 1.15e-13 | 65.1 |
| MS.gene051535.t1 | AT5G25840 | 37.008 | 127 | 60 | 6 | 20 | 136 | 46 | 162 | 3.06e-13 | 63.9 |
Find 31 sgRNAs with CRISPR-Local
Find 34 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGAACTGCTGGCGAAATT+TGG | 0.269881 | 1.3:-7159545 | None:intergenic |
| CCGCAAAATGCAGCTGTTGC+GGG | 0.402544 | 1.3:+7159362 | MS.gene051535:CDS |
| CACGCAGAATGTTCCTTACT+CGG | 0.438740 | 1.3:-7159652 | None:intergenic |
| TTAGGACTTTGGATTCTCCT+AGG | 0.457929 | 1.3:+7159623 | MS.gene051535:CDS |
| TCCTAGGAGCAAGCCGAGTA+AGG | 0.469773 | 1.3:+7159639 | MS.gene051535:CDS |
| GGGAGAGATTCGGTGGAAGA+TGG | 0.469879 | 1.3:+7159425 | MS.gene051535:CDS |
| GTATGTGTCTCTGTCGTCCT+TGG | 0.478341 | 1.3:-7159727 | None:intergenic |
| ACCGCAAAATGCAGCTGTTG+CGG | 0.482069 | 1.3:+7159361 | MS.gene051535:CDS |
| CTGAGGCAGTGAAGGAAGAA+AGG | 0.486207 | 1.3:+7159464 | MS.gene051535:CDS |
| AGAAGCTGAAGCGACGGAGA+TGG | 0.501388 | 1.3:+7159327 | MS.gene051535:CDS |
| CATTCTGCGTGCAGACCTCT+TGG | 0.504691 | 1.3:+7159664 | MS.gene051535:CDS |
| AAGCAGAAGATCTGAACTGC+TGG | 0.512505 | 1.3:-7159555 | None:intergenic |
| GAAGGAAGAAAGGGCGAGGT+CGG | 0.514158 | 1.3:+7159474 | MS.gene051535:CDS |
| ATGCAGCTGTTGCGGGTTGG+TGG | 0.517846 | 1.3:+7159369 | MS.gene051535:CDS |
| TCCTTACTCGGCTTGCTCCT+AGG | 0.526193 | 1.3:-7159640 | None:intergenic |
| TGTGTCTCTGTCGTCCTTGG+CGG | 0.528871 | 1.3:-7159724 | None:intergenic |
| GCGCGCGTGAGGGAGAGATT+CGG | 0.542153 | 1.3:+7159415 | MS.gene051535:CDS |
| ATGCGTACATTGCGCGCGTG+AGG | 0.557254 | 1.3:+7159404 | MS.gene051535:CDS |
| TCATAGTTGCTTCTCAACAA+TGG | 0.575206 | 1.3:+7159693 | MS.gene051535:CDS |
| TGCGTACATTGCGCGCGTGA+GGG | 0.578384 | 1.3:+7159405 | MS.gene051535:CDS |
| TGAGGCAGTGAAGGAAGAAA+GGG | 0.590842 | 1.3:+7159465 | MS.gene051535:CDS |
| CAGTGAAGGAAGAAAGGGCG+AGG | 0.593016 | 1.3:+7159470 | MS.gene051535:CDS |
| TTTATGTGCTGAGGCAGTGA+AGG | 0.603888 | 1.3:+7159456 | MS.gene051535:CDS |
| CGCGTGAGGGAGAGATTCGG+TGG | 0.607365 | 1.3:+7159418 | MS.gene051535:CDS |
| TGTGAAAGAAGCTGAAGCGA+CGG | 0.619197 | 1.3:+7159321 | MS.gene051535:CDS |
| AAAATGCAGCTGTTGCGGGT+TGG | 0.633011 | 1.3:+7159366 | MS.gene051535:CDS |
| CAATGGAAACAACTCCGCCA+AGG | 0.641855 | 1.3:+7159710 | MS.gene051535:CDS |
| TTCGGTGGAAGATGGATATG+CGG | 0.649354 | 1.3:+7159433 | MS.gene051535:CDS |
| CAACTATGAGATCTACCAAG+AGG | 0.689504 | 1.3:-7159679 | None:intergenic |
| CAATTGATGAAGCTTTAATG+CGG | 0.691551 | 1.3:+7159518 | MS.gene051535:CDS |
| GATATGCGGTTTATGTGCTG+AGG | 0.715926 | 1.3:+7159447 | MS.gene051535:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | CAATTGATGAAGCTTTAATG+CGG | + | chr1.3:7159518-7159537 | MS.gene051535:CDS | 30.0% |
| ! | CTGTGAAACAGATTCTTTTT+AGG | + | chr1.3:7159605-7159624 | MS.gene051535:CDS | 30.0% |
| !!! | ACAGATTCTTTTTAGGACTT+TGG | + | chr1.3:7159612-7159631 | MS.gene051535:CDS | 30.0% |
| TCATAGTTGCTTCTCAACAA+TGG | + | chr1.3:7159693-7159712 | MS.gene051535:CDS | 35.0% | |
| CAACTATGAGATCTACCAAG+AGG | - | chr1.3:7159682-7159701 | None:intergenic | 40.0% | |
| TTAGGACTTTGGATTCTCCT+AGG | + | chr1.3:7159623-7159642 | MS.gene051535:CDS | 40.0% | |
| AAGCAGAAGATCTGAACTGC+TGG | - | chr1.3:7159558-7159577 | None:intergenic | 45.0% | |
| CACGCAGAATGTTCCTTACT+CGG | - | chr1.3:7159655-7159674 | None:intergenic | 45.0% | |
| GATATGCGGTTTATGTGCTG+AGG | + | chr1.3:7159447-7159466 | MS.gene051535:CDS | 45.0% | |
| TCTGAACTGCTGGCGAAATT+TGG | - | chr1.3:7159548-7159567 | None:intergenic | 45.0% | |
| TGAGGCAGTGAAGGAAGAAA+GGG | + | chr1.3:7159465-7159484 | MS.gene051535:CDS | 45.0% | |
| TGTGAAAGAAGCTGAAGCGA+CGG | + | chr1.3:7159321-7159340 | MS.gene051535:CDS | 45.0% | |
| TTCGGTGGAAGATGGATATG+CGG | + | chr1.3:7159433-7159452 | MS.gene051535:CDS | 45.0% | |
| TTTATGTGCTGAGGCAGTGA+AGG | + | chr1.3:7159456-7159475 | MS.gene051535:CDS | 45.0% | |
| AAAATGCAGCTGTTGCGGGT+TGG | + | chr1.3:7159366-7159385 | MS.gene051535:CDS | 50.0% | |
| ACCGCAAAATGCAGCTGTTG+CGG | + | chr1.3:7159361-7159380 | MS.gene051535:CDS | 50.0% | |
| CAATGGAAACAACTCCGCCA+AGG | + | chr1.3:7159710-7159729 | MS.gene051535:CDS | 50.0% | |
| CTGAGGCAGTGAAGGAAGAA+AGG | + | chr1.3:7159464-7159483 | MS.gene051535:CDS | 50.0% | |
| GTATGTGTCTCTGTCGTCCT+TGG | - | chr1.3:7159730-7159749 | None:intergenic | 50.0% | |
| AGAAGCTGAAGCGACGGAGA+TGG | + | chr1.3:7159327-7159346 | MS.gene051535:CDS | 55.0% | |
| CAGTGAAGGAAGAAAGGGCG+AGG | + | chr1.3:7159470-7159489 | MS.gene051535:CDS | 55.0% | |
| CATTCTGCGTGCAGACCTCT+TGG | + | chr1.3:7159664-7159683 | MS.gene051535:CDS | 55.0% | |
| CCGCAAAATGCAGCTGTTGC+GGG | + | chr1.3:7159362-7159381 | MS.gene051535:CDS | 55.0% | |
| GAAGGAAGAAAGGGCGAGGT+CGG | + | chr1.3:7159474-7159493 | MS.gene051535:CDS | 55.0% | |
| TCCTAGGAGCAAGCCGAGTA+AGG | + | chr1.3:7159639-7159658 | MS.gene051535:CDS | 55.0% | |
| TGTGTCTCTGTCGTCCTTGG+CGG | - | chr1.3:7159727-7159746 | None:intergenic | 55.0% | |
| ! | CCCGCAACAGCTGCATTTTG+CGG | - | chr1.3:7159365-7159384 | None:intergenic | 55.0% |
| ! | TCCTTACTCGGCTTGCTCCT+AGG | - | chr1.3:7159643-7159662 | None:intergenic | 55.0% |
| !! | GGGAGAGATTCGGTGGAAGA+TGG | + | chr1.3:7159425-7159444 | MS.gene051535:CDS | 55.0% |
| ATGCGTACATTGCGCGCGTG+AGG | + | chr1.3:7159404-7159423 | MS.gene051535:CDS | 60.0% | |
| TGCGTACATTGCGCGCGTGA+GGG | + | chr1.3:7159405-7159424 | MS.gene051535:CDS | 60.0% | |
| !! | ATGCAGCTGTTGCGGGTTGG+TGG | + | chr1.3:7159369-7159388 | MS.gene051535:CDS | 60.0% |
| CGCGTGAGGGAGAGATTCGG+TGG | + | chr1.3:7159418-7159437 | MS.gene051535:CDS | 65.0% | |
| GCGCGCGTGAGGGAGAGATT+CGG | + | chr1.3:7159415-7159434 | MS.gene051535:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 7159307 | 7159756 | 7159307 | ID=MS.gene051535 |
| chr1.3 | mRNA | 7159307 | 7159756 | 7159307 | ID=MS.gene051535.t1;Parent=MS.gene051535 |
| chr1.3 | exon | 7159307 | 7159756 | 7159307 | ID=MS.gene051535.t1.exon1;Parent=MS.gene051535.t1 |
| chr1.3 | CDS | 7159307 | 7159756 | 7159307 | ID=cds.MS.gene051535.t1;Parent=MS.gene051535.t1 |
| Gene Sequence |
| Protein sequence |
