Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25479.t1 | XP_003628357.1 | 99.3 | 610 | 4 | 0 | 1 | 610 | 1 | 610 | 0.00E+00 | 1275.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25479.t1 | B9DFI7 | 80.3 | 614 | 112 | 3 | 3 | 609 | 4 | 615 | 1.1e-307 | 1056.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25479.t1 | G7LA51 | 99.3 | 610 | 4 | 0 | 1 | 610 | 1 | 610 | 0.0e+00 | 1275.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058638 | MS.gene25479 | 0.812313 | 4.51E-51 | -1.69E-46 |
| MS.gene058639 | MS.gene25479 | 0.808264 | 3.37E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene25479 | MS.gene60370 | PPI |
| MS.gene011629 | MS.gene25479 | PPI |
| MS.gene25479 | MS.gene72930 | PPI |
| MS.gene25479 | MS.gene011628 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25479.t1 | MTR_8g055840 | 99.344 | 610 | 4 | 0 | 1 | 610 | 1 | 610 | 0.0 | 1270 |
| MS.gene25479.t1 | MTR_5g040360 | 84.590 | 610 | 93 | 1 | 1 | 610 | 1 | 609 | 0.0 | 1108 |
| MS.gene25479.t1 | MTR_3g040370 | 71.757 | 609 | 166 | 4 | 2 | 609 | 3 | 606 | 0.0 | 946 |
| MS.gene25479.t1 | MTR_4g098890 | 68.874 | 604 | 174 | 5 | 2 | 597 | 3 | 600 | 0.0 | 912 |
| MS.gene25479.t1 | MTR_8g100075 | 54.160 | 613 | 251 | 6 | 17 | 608 | 25 | 628 | 0.0 | 712 |
| MS.gene25479.t1 | MTR_7g076170 | 55.263 | 608 | 245 | 6 | 17 | 601 | 23 | 626 | 0.0 | 711 |
| MS.gene25479.t1 | MTR_0019s0120 | 54.803 | 635 | 247 | 9 | 3 | 609 | 13 | 635 | 0.0 | 708 |
| MS.gene25479.t1 | MTR_1g101370 | 57.383 | 596 | 240 | 8 | 18 | 601 | 25 | 618 | 0.0 | 708 |
| MS.gene25479.t1 | MTR_8g432680 | 52.883 | 607 | 262 | 6 | 17 | 601 | 27 | 631 | 0.0 | 680 |
| MS.gene25479.t1 | MTR_7g006060 | 52.964 | 523 | 234 | 4 | 84 | 594 | 43 | 565 | 0.0 | 585 |
| MS.gene25479.t1 | MTR_0019s0120 | 52.809 | 534 | 212 | 9 | 3 | 508 | 13 | 534 | 0.0 | 562 |
| MS.gene25479.t1 | MTR_8g071280 | 45.660 | 530 | 278 | 7 | 84 | 607 | 70 | 595 | 2.50e-166 | 488 |
| MS.gene25479.t1 | MTR_8g432620 | 44.821 | 531 | 265 | 8 | 82 | 600 | 86 | 600 | 5.63e-164 | 481 |
| MS.gene25479.t1 | MTR_7g076150 | 45.018 | 542 | 270 | 8 | 71 | 600 | 62 | 587 | 2.19e-163 | 479 |
| MS.gene25479.t1 | MTR_5g026930 | 42.833 | 600 | 313 | 10 | 9 | 600 | 13 | 590 | 4.46e-163 | 479 |
| MS.gene25479.t1 | MTR_5g080720 | 43.178 | 535 | 279 | 11 | 75 | 597 | 116 | 637 | 8.46e-154 | 457 |
| MS.gene25479.t1 | MTR_1g442840 | 41.096 | 584 | 302 | 12 | 20 | 575 | 18 | 587 | 3.63e-150 | 447 |
| MS.gene25479.t1 | MTR_1g075900 | 42.755 | 559 | 286 | 12 | 73 | 610 | 79 | 624 | 9.48e-148 | 441 |
| MS.gene25479.t1 | MTR_3g068990 | 44.465 | 533 | 263 | 12 | 82 | 598 | 151 | 666 | 1.30e-147 | 442 |
| MS.gene25479.t1 | MTR_1g069785 | 42.910 | 536 | 273 | 10 | 87 | 602 | 65 | 587 | 1.75e-147 | 439 |
| MS.gene25479.t1 | MTR_1g442840 | 45.607 | 478 | 234 | 9 | 111 | 575 | 10 | 474 | 1.28e-146 | 434 |
| MS.gene25479.t1 | MTR_1g029730 | 44.234 | 529 | 271 | 12 | 84 | 599 | 141 | 658 | 4.11e-145 | 435 |
| MS.gene25479.t1 | MTR_7g076150 | 45.534 | 459 | 222 | 8 | 154 | 600 | 2 | 444 | 6.21e-139 | 412 |
| MS.gene25479.t1 | MTR_5g080720 | 43.061 | 490 | 248 | 12 | 63 | 534 | 98 | 574 | 1.45e-135 | 408 |
| MS.gene25479.t1 | MTR_5g026930 | 42.913 | 508 | 261 | 10 | 9 | 508 | 13 | 499 | 5.76e-133 | 399 |
| MS.gene25479.t1 | MTR_3g096480 | 41.712 | 549 | 280 | 18 | 73 | 600 | 247 | 776 | 6.45e-132 | 405 |
| MS.gene25479.t1 | MTR_5g083150 | 39.388 | 523 | 279 | 13 | 92 | 600 | 100 | 598 | 2.02e-130 | 395 |
| MS.gene25479.t1 | MTR_3g071530 | 38.803 | 518 | 285 | 11 | 92 | 600 | 152 | 646 | 9.18e-127 | 387 |
| MS.gene25479.t1 | MTR_8g093880 | 41.292 | 511 | 267 | 14 | 93 | 584 | 298 | 794 | 1.30e-126 | 392 |
| MS.gene25479.t1 | MTR_8g076650 | 41.811 | 519 | 264 | 15 | 93 | 591 | 387 | 887 | 1.40e-125 | 392 |
| MS.gene25479.t1 | MTR_5g021100 | 40.406 | 542 | 282 | 16 | 75 | 591 | 305 | 830 | 1.52e-125 | 390 |
| MS.gene25479.t1 | MTR_1g051055 | 38.795 | 531 | 292 | 12 | 87 | 600 | 89 | 603 | 1.18e-122 | 375 |
| MS.gene25479.t1 | MTR_3g088790 | 40.076 | 529 | 279 | 17 | 92 | 600 | 232 | 742 | 2.08e-121 | 377 |
| MS.gene25479.t1 | MTR_4g083030 | 32.065 | 552 | 333 | 11 | 70 | 599 | 72 | 603 | 2.62e-93 | 299 |
| MS.gene25479.t1 | MTR_1g022255 | 33.026 | 542 | 312 | 16 | 76 | 600 | 192 | 699 | 1.31e-90 | 295 |
| MS.gene25479.t1 | MTR_3g074780 | 30.648 | 571 | 344 | 14 | 70 | 605 | 140 | 693 | 1.31e-89 | 292 |
| MS.gene25479.t1 | MTR_5g064080 | 30.212 | 566 | 333 | 14 | 70 | 600 | 132 | 670 | 2.05e-84 | 278 |
| MS.gene25479.t1 | MTR_1g022255 | 28.186 | 408 | 248 | 12 | 76 | 467 | 192 | 570 | 2.71e-45 | 169 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25479.t1 | AT1G26850 | 80.163 | 615 | 113 | 3 | 3 | 610 | 4 | 616 | 0.0 | 1057 |
| MS.gene25479.t1 | AT1G26850 | 80.163 | 615 | 113 | 3 | 3 | 610 | 4 | 616 | 0.0 | 1057 |
| MS.gene25479.t1 | AT4G18030 | 68.272 | 602 | 180 | 4 | 7 | 602 | 9 | 605 | 0.0 | 881 |
| MS.gene25479.t1 | AT1G26850 | 79.000 | 500 | 98 | 2 | 3 | 495 | 4 | 503 | 0.0 | 851 |
| MS.gene25479.t1 | AT4G10440 | 55.122 | 615 | 247 | 5 | 7 | 601 | 12 | 617 | 0.0 | 727 |
| MS.gene25479.t1 | AT1G33170 | 53.155 | 634 | 253 | 6 | 5 | 601 | 9 | 635 | 0.0 | 713 |
| MS.gene25479.t1 | AT2G45750 | 54.058 | 616 | 253 | 9 | 17 | 608 | 19 | 628 | 0.0 | 684 |
| MS.gene25479.t1 | AT4G00750 | 51.809 | 608 | 279 | 4 | 16 | 609 | 24 | 631 | 0.0 | 677 |
| MS.gene25479.t1 | AT2G43200 | 52.031 | 517 | 242 | 4 | 84 | 595 | 91 | 606 | 0.0 | 567 |
| MS.gene25479.t1 | AT2G43200 | 52.031 | 517 | 242 | 4 | 84 | 595 | 91 | 606 | 0.0 | 567 |
| MS.gene25479.t1 | AT1G31850 | 42.114 | 615 | 328 | 14 | 2 | 607 | 8 | 603 | 7.67e-173 | 504 |
| MS.gene25479.t1 | AT1G31850 | 42.114 | 615 | 328 | 14 | 2 | 607 | 8 | 603 | 7.67e-173 | 504 |
| MS.gene25479.t1 | AT1G31850 | 42.114 | 615 | 328 | 14 | 2 | 607 | 8 | 603 | 7.67e-173 | 504 |
| MS.gene25479.t1 | AT1G31850 | 42.114 | 615 | 328 | 14 | 2 | 607 | 8 | 603 | 7.67e-173 | 504 |
| MS.gene25479.t1 | AT4G19120 | 43.942 | 553 | 295 | 9 | 69 | 610 | 52 | 600 | 2.43e-169 | 495 |
| MS.gene25479.t1 | AT4G19120 | 43.942 | 553 | 295 | 9 | 69 | 610 | 52 | 600 | 2.43e-169 | 495 |
| MS.gene25479.t1 | AT4G00740 | 43.049 | 597 | 302 | 11 | 22 | 606 | 29 | 599 | 9.25e-165 | 484 |
| MS.gene25479.t1 | AT4G00740 | 43.049 | 597 | 302 | 11 | 22 | 606 | 29 | 599 | 9.25e-165 | 484 |
| MS.gene25479.t1 | AT5G06050 | 44.090 | 533 | 271 | 12 | 80 | 599 | 145 | 663 | 4.10e-150 | 449 |
| MS.gene25479.t1 | AT1G04430 | 41.799 | 567 | 287 | 12 | 64 | 602 | 64 | 615 | 1.49e-145 | 435 |
| MS.gene25479.t1 | AT1G04430 | 41.799 | 567 | 287 | 12 | 64 | 602 | 64 | 615 | 1.49e-145 | 435 |
| MS.gene25479.t1 | AT1G04430 | 41.799 | 567 | 287 | 12 | 64 | 602 | 64 | 615 | 1.49e-145 | 435 |
| MS.gene25479.t1 | AT2G39750 | 41.423 | 548 | 292 | 11 | 69 | 598 | 154 | 690 | 1.52e-145 | 437 |
| MS.gene25479.t1 | AT4G14360 | 43.444 | 511 | 259 | 10 | 82 | 575 | 74 | 571 | 3.44e-143 | 429 |
| MS.gene25479.t1 | AT4G14360 | 43.444 | 511 | 259 | 10 | 82 | 575 | 74 | 571 | 3.44e-143 | 429 |
| MS.gene25479.t1 | AT3G23300 | 42.329 | 541 | 278 | 12 | 82 | 602 | 77 | 603 | 8.57e-143 | 427 |
| MS.gene25479.t1 | AT3G23300 | 42.329 | 541 | 278 | 12 | 82 | 602 | 77 | 603 | 8.57e-143 | 427 |
| MS.gene25479.t1 | AT1G77260 | 40.418 | 574 | 304 | 14 | 48 | 598 | 96 | 654 | 2.26e-140 | 423 |
| MS.gene25479.t1 | AT4G19120 | 44.789 | 451 | 235 | 8 | 69 | 508 | 52 | 499 | 3.53e-139 | 414 |
| MS.gene25479.t1 | AT5G14430 | 39.234 | 627 | 331 | 16 | 10 | 608 | 8 | 612 | 9.29e-137 | 412 |
| MS.gene25479.t1 | AT5G14430 | 38.915 | 627 | 333 | 16 | 10 | 608 | 8 | 612 | 3.70e-135 | 408 |
| MS.gene25479.t1 | AT2G34300 | 41.714 | 525 | 272 | 13 | 93 | 600 | 250 | 757 | 8.75e-130 | 399 |
| MS.gene25479.t1 | AT2G34300 | 41.714 | 525 | 272 | 13 | 93 | 600 | 250 | 757 | 8.75e-130 | 399 |
| MS.gene25479.t1 | AT2G34300 | 41.714 | 525 | 272 | 13 | 93 | 600 | 250 | 757 | 8.75e-130 | 399 |
| MS.gene25479.t1 | AT5G04060 | 40.076 | 529 | 285 | 11 | 87 | 600 | 86 | 597 | 1.38e-129 | 393 |
| MS.gene25479.t1 | AT1G29470 | 41.714 | 525 | 272 | 14 | 93 | 600 | 250 | 757 | 5.32e-129 | 397 |
| MS.gene25479.t1 | AT1G29470 | 41.714 | 525 | 272 | 14 | 93 | 600 | 250 | 757 | 5.32e-129 | 397 |
| MS.gene25479.t1 | AT5G64030 | 42.095 | 506 | 262 | 14 | 93 | 580 | 308 | 800 | 5.71e-129 | 399 |
| MS.gene25479.t1 | AT3G10200 | 39.474 | 532 | 286 | 13 | 87 | 600 | 75 | 588 | 4.73e-127 | 387 |
| MS.gene25479.t1 | AT3G56080 | 38.921 | 519 | 282 | 11 | 93 | 600 | 114 | 608 | 2.85e-126 | 385 |
| MS.gene25479.t1 | AT3G51070 | 39.798 | 593 | 302 | 20 | 36 | 600 | 324 | 889 | 3.63e-126 | 393 |
| MS.gene25479.t1 | AT2G40280 | 37.524 | 525 | 286 | 12 | 89 | 600 | 86 | 581 | 6.41e-126 | 384 |
| MS.gene25479.t1 | AT3G10200 | 38.921 | 519 | 275 | 14 | 74 | 573 | 67 | 562 | 3.92e-118 | 363 |
| MS.gene25479.t1 | AT3G56080 | 40.625 | 448 | 239 | 10 | 93 | 529 | 114 | 545 | 2.43e-112 | 347 |
| MS.gene25479.t1 | AT3G51070 | 40.962 | 520 | 260 | 18 | 36 | 529 | 324 | 822 | 4.24e-109 | 347 |
| MS.gene25479.t1 | AT1G13860 | 34.522 | 533 | 297 | 14 | 82 | 585 | 79 | 588 | 1.74e-95 | 305 |
| MS.gene25479.t1 | AT1G13860 | 34.522 | 533 | 297 | 14 | 82 | 585 | 79 | 588 | 1.74e-95 | 305 |
| MS.gene25479.t1 | AT1G13860 | 34.522 | 533 | 297 | 14 | 82 | 585 | 79 | 588 | 1.74e-95 | 305 |
| MS.gene25479.t1 | AT1G13860 | 34.522 | 533 | 297 | 14 | 82 | 585 | 79 | 588 | 1.74e-95 | 305 |
| MS.gene25479.t1 | AT2G03480 | 30.990 | 626 | 347 | 16 | 10 | 599 | 16 | 592 | 1.17e-91 | 295 |
| MS.gene25479.t1 | AT2G03480 | 31.200 | 625 | 358 | 16 | 10 | 599 | 16 | 603 | 9.61e-91 | 293 |
| MS.gene25479.t1 | AT1G13860 | 37.188 | 441 | 239 | 12 | 171 | 585 | 4 | 432 | 5.21e-88 | 281 |
| MS.gene25479.t1 | AT1G19430 | 31.955 | 532 | 317 | 15 | 84 | 600 | 221 | 722 | 1.51e-85 | 282 |
| MS.gene25479.t1 | AT1G19430 | 31.955 | 532 | 317 | 15 | 84 | 600 | 221 | 722 | 1.51e-85 | 282 |
| MS.gene25479.t1 | AT1G78240 | 30.742 | 566 | 337 | 14 | 70 | 599 | 132 | 678 | 3.44e-83 | 275 |
| MS.gene25479.t1 | AT1G78240 | 30.742 | 566 | 337 | 14 | 70 | 599 | 132 | 678 | 3.44e-83 | 275 |
| MS.gene25479.t1 | AT2G03480 | 31.461 | 356 | 219 | 7 | 57 | 395 | 52 | 399 | 4.06e-50 | 179 |
| MS.gene25479.t1 | AT1G19430 | 27.960 | 397 | 247 | 12 | 87 | 469 | 224 | 595 | 4.23e-43 | 164 |
Find 161 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTGGTTATTGGGTGCTTTC+TGG | 0.105198 | 8.3:-43031023 | MS.gene25479:CDS |
| TGATGGATATGGCAACTTTA+TGG | 0.168125 | 8.3:+43031248 | None:intergenic |
| TATCAGCACCTTGAGGAAAT+TGG | 0.176986 | 8.3:+43031856 | None:intergenic |
| TGCGAGTCAAAACTTAAATT+TGG | 0.190280 | 8.3:+43032227 | None:intergenic |
| TGCTGTTTCTTCTATATATT+GGG | 0.197614 | 8.3:-43032332 | MS.gene25479:CDS |
| GTGCTGTTTCTTCTATATAT+TGG | 0.235126 | 8.3:-43032333 | MS.gene25479:CDS |
| ACTCCGACTCCTAAAGTTTC+TGG | 0.236262 | 8.3:-43030143 | MS.gene25479:CDS |
| TTCTAAGGCCTGGTGGTTAT+TGG | 0.265507 | 8.3:-43031034 | MS.gene25479:CDS |
| CAAGTTGGGGTGCATATCTT+TGG | 0.273541 | 8.3:-43031377 | MS.gene25479:CDS |
| TCTAAGGCCTGGTGGTTATT+GGG | 0.298345 | 8.3:-43031033 | MS.gene25479:CDS |
| CGGAAGATACCGCAACATTA+TGG | 0.304526 | 8.3:-43029961 | MS.gene25479:CDS |
| GTTTCTAGTGGCTCTATTCC+TGG | 0.309081 | 8.3:-43030071 | MS.gene25479:CDS |
| AGATCGCCGCCAGAAACTTT+AGG | 0.311063 | 8.3:+43030134 | None:intergenic |
| TGAAGTCGATGTGTTAATTA+AGG | 0.331599 | 8.3:-43028786 | MS.gene25479:CDS |
| CGCCTTCTGGTCGCAATATT+CGG | 0.333406 | 8.3:+43028825 | None:intergenic |
| AATTGCTGTCAAACAGTATT+GGG | 0.341304 | 8.3:-43028681 | MS.gene25479:CDS |
| AACCAAGTGCTGCTGATAAT+AGG | 0.347469 | 8.3:-43032394 | MS.gene25479:CDS |
| CATATGTCAGGTTGCAAGTT+GGG | 0.349075 | 8.3:-43031391 | MS.gene25479:intron |
| ATTAATTCACTGTTGGATTC+CGG | 0.352872 | 8.3:-43029981 | MS.gene25479:CDS |
| AGAAGGCTGAAATTGCAATT+TGG | 0.354585 | 8.3:-43030881 | MS.gene25479:CDS |
| GTGCAGATCTTTATAGTAGT+TGG | 0.359407 | 8.3:-43032359 | MS.gene25479:CDS |
| TCGAAGGCTCTTGATGGATA+TGG | 0.361140 | 8.3:+43031237 | None:intergenic |
| TCTTCCTCAAGTTCCTCCTT+TGG | 0.361668 | 8.3:+43030957 | None:intergenic |
| GTTCTCGCTGTTTGATTCCA+TGG | 0.364915 | 8.3:-43031203 | MS.gene25479:CDS |
| ATTAAGGTAAAGAAGTTAAT+CGG | 0.370727 | 8.3:-43028770 | MS.gene25479:CDS |
| GCATGGCAAAGAAGTGGTTT+TGG | 0.370846 | 8.3:-43032308 | MS.gene25479:CDS |
| CGGATTATGACAGCGCCTTC+TGG | 0.378229 | 8.3:+43028812 | None:intergenic |
| AAAGGTGTTACATACCCTTT+TGG | 0.379736 | 8.3:+43032008 | None:intergenic |
| TAAACACATTTCCCTCGTAT+TGG | 0.387315 | 8.3:+43031898 | None:intergenic |
| TATGATCTCATTCATGCTAA+TGG | 0.387963 | 8.3:-43029656 | MS.gene25479:CDS |
| ATCTTAAACCATTTCCAAAC+AGG | 0.389098 | 8.3:-43030115 | MS.gene25479:CDS |
| ATCAGCACCTTGAGGAAATT+GGG | 0.391471 | 8.3:+43031857 | None:intergenic |
| TATGGATATGAATGCTGGTT+TGG | 0.391975 | 8.3:-43029943 | MS.gene25479:CDS |
| GGGACATAATCCCTACTCTT+AGG | 0.394894 | 8.3:+43031978 | None:intergenic |
| TCCTCCTTTGGTCTCTGCCA+TGG | 0.397409 | 8.3:+43030969 | None:intergenic |
| TTGAGAAGGCTATTCAGAAT+TGG | 0.398684 | 8.3:-43031923 | MS.gene25479:CDS |
| ACGGCACTCGACACCGGTTG+TGG | 0.400333 | 8.3:-43031780 | MS.gene25479:CDS |
| TAGTTGACCTTCCAATTGAT+TGG | 0.405243 | 8.3:+43030996 | None:intergenic |
| AATGAGATGGAATATGAAAT+TGG | 0.407077 | 8.3:-43028744 | MS.gene25479:CDS |
| TTCTCGCTGTTTGATTCCAT+GGG | 0.411610 | 8.3:-43031202 | MS.gene25479:CDS |
| GCATATAGCCTGTTTGGAAA+TGG | 0.416366 | 8.3:+43030107 | None:intergenic |
| AGGGGTGTACCTGCTGTTAT+TGG | 0.418491 | 8.3:-43031282 | MS.gene25479:CDS |
| TTGTAAGGTGCATTAGCATA+AGG | 0.420580 | 8.3:+43031957 | None:intergenic |
| GGGATCGCATATAGCCTGTT+TGG | 0.420901 | 8.3:+43030101 | None:intergenic |
| CATAATGTTGCGGTATCTTC+CGG | 0.426759 | 8.3:+43029962 | None:intergenic |
| CAAGAAAATTAATTCACTGT+TGG | 0.428445 | 8.3:-43029988 | MS.gene25479:CDS |
| ACAGCAATTAGTACTTTCTC+AGG | 0.435226 | 8.3:+43028695 | None:intergenic |
| AAACACCTTAGTGTTCGAAT+TGG | 0.435639 | 8.3:+43032172 | None:intergenic |
| CAATGTAACTTCTCTTCCTC+TGG | 0.435812 | 8.3:+43032044 | None:intergenic |
| AGGTTGCTAAGAAACTTTGC+TGG | 0.437795 | 8.3:-43030917 | MS.gene25479:CDS |
| TAATTGCTGTCAAACAGTAT+TGG | 0.437862 | 8.3:-43028682 | MS.gene25479:CDS |
| ATCTTGACACGGAGTGTAAT+CGG | 0.437871 | 8.3:+43032127 | None:intergenic |
| TGAATGAGATCATATGTTCT+TGG | 0.437879 | 8.3:+43029665 | None:intergenic |
| ATGGATATGAATGCTGGTTT+GGG | 0.443758 | 8.3:-43029942 | MS.gene25479:CDS |
| ATTTGGAACTACATCACATT+CGG | 0.450872 | 8.3:+43032244 | None:intergenic |
| TTCTTACCATTTGCTCCCCA+TGG | 0.455409 | 8.3:+43031186 | None:intergenic |
| TTGTCTGCTACGACATGATT+CGG | 0.455765 | 8.3:+43030842 | None:intergenic |
| CTCACTGTCCCATCATTGAT+AGG | 0.457820 | 8.3:+43031804 | None:intergenic |
| GCCATGTCGAAGGCTCTTGA+TGG | 0.458291 | 8.3:+43031231 | None:intergenic |
| TGATTGGCATCTATCATGAT+TGG | 0.458687 | 8.3:-43029818 | MS.gene25479:intron |
| TGGAAGTTGATAGAGTTCTA+AGG | 0.464058 | 8.3:-43031049 | MS.gene25479:CDS |
| AACATTATGGATATGAATGC+TGG | 0.465021 | 8.3:-43029948 | MS.gene25479:CDS |
| TTGATTCCATGGGGAGCAAA+TGG | 0.467921 | 8.3:-43031192 | MS.gene25479:intron |
| TCTGTTATTCCTATCAATGA+TGG | 0.468006 | 8.3:-43031813 | MS.gene25479:CDS |
| TTTCTGGTCCTCCAATCAAT+TGG | 0.468116 | 8.3:-43031007 | MS.gene25479:CDS |
| TGTATGATCCCAGCACCAAA+AGG | 0.471853 | 8.3:-43032023 | MS.gene25479:CDS |
| CCTCAGATCCTGATGATGTC+TGG | 0.472305 | 8.3:-43030791 | MS.gene25479:intron |
| AGTACAATTTGCTCTTGAAA+GGG | 0.473622 | 8.3:-43031301 | MS.gene25479:CDS |
| CATGCATACCAGACATCATC+AGG | 0.476480 | 8.3:+43030783 | None:intergenic |
| GGAAATTGGGTTCCACCACC+AGG | 0.486235 | 8.3:+43031870 | None:intergenic |
| ACATAAACATACCCCACAAC+CGG | 0.490951 | 8.3:+43031767 | None:intergenic |
| AAAAGGAGATAGTATAGCAT+TGG | 0.491210 | 8.3:-43032285 | MS.gene25479:CDS |
| AAGTACAATTTGCTCTTGAA+AGG | 0.491607 | 8.3:-43031302 | MS.gene25479:CDS |
| TGTAAGGTGCATTAGCATAA+GGG | 0.498151 | 8.3:+43031958 | None:intergenic |
| GGAAATGTGTTTAGATTCCC+TGG | 0.500897 | 8.3:-43031888 | MS.gene25479:CDS |
| TGCCATGTCATTTGCACCGA+GGG | 0.503751 | 8.3:-43031340 | MS.gene25479:CDS |
| ATATATGAGCGAGGATTGAT+TGG | 0.505447 | 8.3:-43029834 | MS.gene25479:CDS |
| GTCCTATTATCAGCAGCACT+TGG | 0.509665 | 8.3:+43032392 | None:intergenic |
| CGGCACTCGACACCGGTTGT+GGG | 0.509777 | 8.3:-43031779 | MS.gene25479:CDS |
| TCTTCTATATATTGGGAGCA+TGG | 0.513373 | 8.3:-43032325 | MS.gene25479:CDS |
| TGGCCTCTTTAGTTTGTACC+AGG | 0.518458 | 8.3:-43029636 | MS.gene25479:CDS |
| GTTATCATCCTGGTATGTCT+CGG | 0.523970 | 8.3:+43030040 | None:intergenic |
| CTACTCTTAGGCCATGGAAA+AGG | 0.529226 | 8.3:+43031990 | None:intergenic |
| TTGACCTTCCAATTGATTGG+AGG | 0.532026 | 8.3:+43030999 | None:intergenic |
| AGTTTCTTCCGAGACATACC+AGG | 0.532827 | 8.3:-43030048 | MS.gene25479:CDS |
| CTATTCATTCATCTAAGTCA+TGG | 0.534410 | 8.3:-43029905 | MS.gene25479:CDS |
| TATCCTGGTACAAACTAAAG+AGG | 0.534977 | 8.3:+43029633 | None:intergenic |
| ATCATATGTTCTTGGATATG+TGG | 0.538349 | 8.3:+43029673 | None:intergenic |
| TATGTCTCGGAAGAAACTCC+AGG | 0.538435 | 8.3:+43030053 | None:intergenic |
| TCATATGTCAGGTTGCAAGT+TGG | 0.542053 | 8.3:-43031392 | MS.gene25479:intron |
| CAAGAGTCTCACAGTTGAGA+AGG | 0.546705 | 8.3:-43031937 | MS.gene25479:CDS |
| GTGTTTAGATTCCCTGGTGG+TGG | 0.546867 | 8.3:-43031882 | MS.gene25479:CDS |
| GAAGGAACACTTACTTATCC+TGG | 0.549922 | 8.3:+43029618 | None:intergenic |
| ATATGTCAGGTTGCAAGTTG+GGG | 0.550068 | 8.3:-43031390 | MS.gene25479:intron |
| AAACAGTATTGGGTTACTGA+TGG | 0.550680 | 8.3:-43028671 | MS.gene25479:CDS |
| TCAACTGTGAGACTCTTGTA+AGG | 0.555125 | 8.3:+43031942 | None:intergenic |
| GGCACTCGACACCGGTTGTG+GGG | 0.556598 | 8.3:-43031778 | MS.gene25479:intron |
| GTTGATAGAGTTCTAAGGCC+TGG | 0.557635 | 8.3:-43031044 | MS.gene25479:CDS |
| CTGTTATTCCTATCAATGAT+GGG | 0.558379 | 8.3:-43031812 | MS.gene25479:CDS |
| TATTCATTCATCTAAGTCAT+GGG | 0.558548 | 8.3:-43029904 | MS.gene25479:CDS |
| TGAATCCAATTCGAACACTA+AGG | 0.559388 | 8.3:-43032177 | MS.gene25479:CDS |
| ATAGAGCCACTAGAAACTCT+AGG | 0.562772 | 8.3:+43030077 | None:intergenic |
| CAGTGATTATTGTGTTGATG+TGG | 0.563280 | 8.3:+43028643 | None:intergenic |
| AGAACAAAGAAAGATTGAAG+AGG | 0.565209 | 8.3:-43030937 | MS.gene25479:CDS |
| TGGTCCTCCAATCAATTGGA+AGG | 0.566122 | 8.3:-43031003 | MS.gene25479:CDS |
| AGTTAATCGGAGGAATGAGA+TGG | 0.569106 | 8.3:-43028757 | MS.gene25479:CDS |
| TGTGCTTCGTGAGAGTCCCT+CGG | 0.570141 | 8.3:+43031324 | None:intergenic |
| TAATCCCTACTCTTAGGCCA+TGG | 0.572458 | 8.3:+43031984 | None:intergenic |
| GGTTGCTAAGAAACTTTGCT+GGG | 0.577899 | 8.3:-43030916 | MS.gene25479:CDS |
| GAGACCAAAGGAGGAACTTG+AGG | 0.584022 | 8.3:-43030961 | MS.gene25479:CDS |
| GTGAGGACGGCACTCGACAC+CGG | 0.585130 | 8.3:-43031786 | MS.gene25479:CDS |
| TATGAAATTGGTCGATCATG+AGG | 0.585763 | 8.3:-43028732 | MS.gene25479:CDS |
| CCAGACATCATCAGGATCTG+AGG | 0.586281 | 8.3:+43030791 | None:intergenic |
| CTGGGAGAAGAAGTCTGAGA+AGG | 0.587700 | 8.3:-43030898 | MS.gene25479:CDS |
| AGAAGACATTCTTCTCGAGA+TGG | 0.592742 | 8.3:-43028849 | MS.gene25479:CDS |
| AGTACTTTCTCAGGAACAAG+AGG | 0.593177 | 8.3:+43028704 | None:intergenic |
| CTATAGGTATAAGAAAATGA+AGG | 0.595392 | 8.3:-43030174 | MS.gene25479:intron |
| GTATGATCCCAGCACCAAAA+GGG | 0.596741 | 8.3:-43032022 | MS.gene25479:CDS |
| TTGGGAGCATGGCAAAGAAG+TGG | 0.598147 | 8.3:-43032314 | MS.gene25479:CDS |
| ACCAGGATGATAACAAAATG+TGG | 0.598954 | 8.3:-43030031 | MS.gene25479:CDS |
| GTCCCTCGGTGCAAATGACA+TGG | 0.599694 | 8.3:+43031338 | None:intergenic |
| GACCGAATATTGCGACCAGA+AGG | 0.601380 | 8.3:-43028827 | MS.gene25479:CDS |
| CCGCCAGAAACTTTAGGAGT+CGG | 0.604385 | 8.3:+43030140 | None:intergenic |
| TGCAGATGGAATGTATATGA+TGG | 0.612639 | 8.3:-43031069 | MS.gene25479:intron |
| CAATGATGGGACAGTGAGGA+CGG | 0.612966 | 8.3:-43031799 | MS.gene25479:CDS |
| GTACAATTTGCTCTTGAAAG+GGG | 0.614072 | 8.3:-43031300 | MS.gene25479:CDS |
| TTTGACTAACTTCACCAGCA+TGG | 0.614335 | 8.3:+43032204 | None:intergenic |
| AAATTGGTCGATCATGAGGA+TGG | 0.621937 | 8.3:-43028728 | MS.gene25479:CDS |
| CATTCATATCCATAATGTTG+CGG | 0.623801 | 8.3:+43029952 | None:intergenic |
| ATAGCTGAGAAAAGTACGCT+CGG | 0.625053 | 8.3:-43029861 | MS.gene25479:CDS |
| AGCCACTAGAAACTCTAGGA+GGG | 0.628438 | 8.3:+43030081 | None:intergenic |
| CAGAATTGGATCCAATACGA+GGG | 0.635879 | 8.3:-43031909 | MS.gene25479:CDS |
| GGATTCGCAAAATTCTACAC+TGG | 0.639914 | 8.3:+43030812 | None:intergenic |
| ACACTCCGTGTCAAGATCAA+CGG | 0.641064 | 8.3:-43032121 | MS.gene25479:CDS |
| AGAACAATGAGCCATGTCGA+AGG | 0.642478 | 8.3:+43031221 | None:intergenic |
| AGAGAGACACTGTCCTCCAG+AGG | 0.644444 | 8.3:-43032060 | MS.gene25479:CDS |
| GGTGGAACCCAATTTCCTCA+AGG | 0.645103 | 8.3:-43031864 | MS.gene25479:CDS |
| GAGCCACTAGAAACTCTAGG+AGG | 0.645440 | 8.3:+43030080 | None:intergenic |
| GAAAGCACCCAATAACCACC+AGG | 0.649776 | 8.3:+43031026 | None:intergenic |
| GGAAGGTCAACTACAAACCA+TGG | 0.650669 | 8.3:-43030986 | MS.gene25479:CDS |
| TCCATCAAGAGCCTTCGACA+TGG | 0.657437 | 8.3:-43031232 | MS.gene25479:CDS |
| TCAGAATTGGATCCAATACG+AGG | 0.658785 | 8.3:-43031910 | MS.gene25479:CDS |
| ATCCCTCCTAGAGTTTCTAG+TGG | 0.659300 | 8.3:-43030083 | MS.gene25479:CDS |
| ATATATTTATCAGCACCTTG+AGG | 0.663185 | 8.3:+43031849 | None:intergenic |
| TGTAACTTCTCTTCCTCTGG+AGG | 0.663464 | 8.3:+43032047 | None:intergenic |
| AAGGTAAAGAAGTTAATCGG+AGG | 0.666069 | 8.3:-43028767 | MS.gene25479:CDS |
| CAAACCATGGCAGAGACCAA+AGG | 0.668045 | 8.3:-43030973 | MS.gene25479:CDS |
| CCGACTCCTAAAGTTTCTGG+CGG | 0.668444 | 8.3:-43030140 | MS.gene25479:CDS |
| GCTACGACATGATTCGGTGT+CGG | 0.670657 | 8.3:+43030848 | None:intergenic |
| TCTCGCTGTTTGATTCCATG+GGG | 0.671713 | 8.3:-43031201 | MS.gene25479:CDS |
| GAAATTGGGTTCCACCACCA+GGG | 0.677362 | 8.3:+43031871 | None:intergenic |
| ACCATGGCAGAGACCAAAGG+AGG | 0.677739 | 8.3:-43030970 | MS.gene25479:CDS |
| TCGGTATAACGAGCATCACA+AGG | 0.677771 | 8.3:+43032146 | None:intergenic |
| GATAGAGTTCTAAGGCCTGG+TGG | 0.678122 | 8.3:-43031041 | MS.gene25479:CDS |
| TTGCCATGTCATTTGCACCG+AGG | 0.679888 | 8.3:-43031341 | MS.gene25479:CDS |
| TGACTTAGATGAATGAATAG+CGG | 0.692625 | 8.3:+43029908 | None:intergenic |
| CTCGGTGTGATATATGAGCG+AGG | 0.696906 | 8.3:-43029843 | MS.gene25479:CDS |
| CTATCAATGATGGGACAGTG+AGG | 0.728235 | 8.3:-43031803 | MS.gene25479:CDS |
| AATGTGTTTAGATTCCCTGG+TGG | 0.739635 | 8.3:-43031885 | MS.gene25479:CDS |
| GCACGCCGTTGATCTTGACA+CGG | 0.740888 | 8.3:+43032116 | None:intergenic |
| TTAACACATCGACTTCATCG+CGG | 0.761114 | 8.3:+43028792 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAAAAATGTATAAATAAA+GGG | + | chr8.3:43030694-43030713 | None:intergenic | 10.0% |
| !! | ATAAATATATAACAACAAAA+AGG | + | chr8.3:43030301-43030320 | None:intergenic | 10.0% |
| !! | TAAATATATAACAACAAAAA+GGG | + | chr8.3:43030300-43030319 | None:intergenic | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | + | chr8.3:43030695-43030714 | None:intergenic | 10.0% |
| !!! | CACATTTTAATAAAAAAATT+AGG | - | chr8.3:43031765-43031784 | MS.gene25479:intron | 10.0% |
| !! | AAAATTGTGTCAATTAAATT+GGG | - | chr8.3:43030730-43030749 | MS.gene25479:intron | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | + | chr8.3:43030693-43030712 | None:intergenic | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | + | chr8.3:43030629-43030648 | None:intergenic | 15.0% |
| !! | TACATATTACTTTGATTATT+CGG | - | chr8.3:43029605-43029624 | MS.gene25479:intron | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | + | chr8.3:43030630-43030649 | None:intergenic | 15.0% |
| !!! | GATTTTAATATCCATTTTAT+TGG | + | chr8.3:43031936-43031955 | None:intergenic | 15.0% |
| !!! | TTATCTTTATTGTTTTATGT+TGG | + | chr8.3:43031886-43031905 | None:intergenic | 15.0% |
| !! | AAAACAACATATAGCTTATA+TGG | + | chr8.3:43029439-43029458 | None:intergenic | 20.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | + | chr8.3:43030670-43030689 | None:intergenic | 20.0% |
| !! | AACATACAAGAAAAAAAAAC+AGG | + | chr8.3:43031322-43031341 | None:intergenic | 20.0% |
| !! | AAGTCATACAATCAATAATA+AGG | - | chr8.3:43031972-43031991 | MS.gene25479:CDS | 20.0% |
| !! | ACAGCTTAATTAATTACTTA+TGG | - | chr8.3:43029366-43029385 | MS.gene25479:intron | 20.0% |
| !! | AGTTGTATTGAAAATTGAAA+TGG | + | chr8.3:43030597-43030616 | None:intergenic | 20.0% |
| !! | ATTAAGGTAAAGAAGTTAAT+CGG | - | chr8.3:43032280-43032299 | MS.gene25479:CDS | 20.0% |
| !! | CAAAATTGTGTCAATTAAAT+TGG | - | chr8.3:43030729-43030748 | MS.gene25479:intron | 20.0% |
| !! | GTTGTATTGAAAATTGAAAT+GGG | + | chr8.3:43030596-43030615 | None:intergenic | 20.0% |
| !! | TAATGTTGTATAGAAATAAG+AGG | - | chr8.3:43030822-43030841 | MS.gene25479:CDS | 20.0% |
| !!! | ACCATTTGACATTATAATTT+TGG | - | chr8.3:43029949-43029968 | MS.gene25479:CDS | 20.0% |
| !!! | CACATTTTTTTCTTCAATTT+TGG | - | chr8.3:43031797-43031816 | MS.gene25479:CDS | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | + | chr8.3:43030560-43030579 | None:intergenic | 20.0% |
| !!! | TTTTATAATGGCCATATTTA+GGG | + | chr8.3:43031645-43031664 | None:intergenic | 20.0% |
| !!! | TTTTGTTGATTTTTTTATCC+AGG | - | chr8.3:43031341-43031360 | MS.gene25479:CDS | 20.0% |
| !!! | TTTTTATAATGGCCATATTT+AGG | + | chr8.3:43031646-43031665 | None:intergenic | 20.0% |
| ! | AAAACTATTAGCTGCAAATA+AGG | - | chr8.3:43029922-43029941 | MS.gene25479:CDS | 25.0% |
| ! | AATGAGATGGAATATGAAAT+TGG | - | chr8.3:43032306-43032325 | MS.gene25479:CDS | 25.0% |
| ! | AATGTATGTATTCATATGTC+AGG | - | chr8.3:43029647-43029666 | MS.gene25479:CDS | 25.0% |
| ! | AGATCTGACATGAATAAAAT+AGG | + | chr8.3:43031280-43031299 | None:intergenic | 25.0% |
| ! | ATATATAACAACAAAAAGGG+AGG | + | chr8.3:43030297-43030316 | None:intergenic | 25.0% |
| ! | CAAGAAAATTAATTCACTGT+TGG | - | chr8.3:43031062-43031081 | MS.gene25479:CDS | 25.0% |
| ! | CTATAGGTATAAGAAAATGA+AGG | - | chr8.3:43030876-43030895 | MS.gene25479:CDS | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | + | chr8.3:43030671-43030690 | None:intergenic | 25.0% |
| ! | GCCAAAATTATAATGTCAAA+TGG | + | chr8.3:43029953-43029972 | None:intergenic | 25.0% |
| ! | TAAAATAGGATCGAATAGTT+AGG | + | chr8.3:43031266-43031285 | None:intergenic | 25.0% |
| ! | TATATAACAACAAAAAGGGA+GGG | + | chr8.3:43030296-43030315 | None:intergenic | 25.0% |
| ! | TATTCATTCATCTAAGTCAT+GGG | - | chr8.3:43031146-43031165 | MS.gene25479:intron | 25.0% |
| ! | TTGGGAACTTAAAAAATAAG+CGG | - | chr8.3:43029471-43029490 | MS.gene25479:intron | 25.0% |
| !! | AAAAACAAGTTTTCTGCTAA+TGG | + | chr8.3:43032100-43032119 | None:intergenic | 25.0% |
| !! | ATTGTTCTAAATTGTGATTG+CGG | - | chr8.3:43030385-43030404 | MS.gene25479:intron | 25.0% |
| !! | TTTTTAACCATGTAACAGTT+TGG | + | chr8.3:43031585-43031604 | None:intergenic | 25.0% |
| !!! | CTCATTTTTCTGCAATATAA+AGG | + | chr8.3:43030422-43030441 | None:intergenic | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | + | chr8.3:43030561-43030580 | None:intergenic | 25.0% |
| !!! | TGCTGTTTCTTCTATATATT+GGG | - | chr8.3:43028718-43028737 | MS.gene25479:CDS | 25.0% |
| AAAACAGGATCGAATAGTTA+AGG | + | chr8.3:43031307-43031326 | None:intergenic | 30.0% | |
| AAAAGGAGATAGTATAGCAT+TGG | - | chr8.3:43028765-43028784 | MS.gene25479:CDS | 30.0% | |
| AACATTATGGATATGAATGC+TGG | - | chr8.3:43031102-43031121 | MS.gene25479:intron | 30.0% | |
| AATAAGCGGAAAACAACTTA+CGG | - | chr8.3:43029485-43029504 | MS.gene25479:intron | 30.0% | |
| AATTGCTGTCAAACAGTATT+GGG | - | chr8.3:43032369-43032388 | MS.gene25479:CDS | 30.0% | |
| AGAACAAAGAAAGATTGAAG+AGG | - | chr8.3:43030113-43030132 | MS.gene25479:CDS | 30.0% | |
| ATATATTTATCAGCACCTTG+AGG | + | chr8.3:43029204-43029223 | None:intergenic | 30.0% | |
| ATCATATGTTCTTGGATATG+TGG | + | chr8.3:43031380-43031399 | None:intergenic | 30.0% | |
| ATCTTAAACCATTTCCAAAC+AGG | - | chr8.3:43030935-43030954 | MS.gene25479:CDS | 30.0% | |
| ATTAATTCACTGTTGGATTC+CGG | - | chr8.3:43031069-43031088 | MS.gene25479:intron | 30.0% | |
| CATTCATATCCATAATGTTG+CGG | + | chr8.3:43031101-43031120 | None:intergenic | 30.0% | |
| CTATTCATTCATCTAAGTCA+TGG | - | chr8.3:43031145-43031164 | MS.gene25479:intron | 30.0% | |
| CTGTTATTCCTATCAATGAT+GGG | - | chr8.3:43029238-43029257 | MS.gene25479:intron | 30.0% | |
| TAATTGCTGTCAAACAGTAT+TGG | - | chr8.3:43032368-43032387 | MS.gene25479:CDS | 30.0% | |
| TATGATCTCATTCATGCTAA+TGG | - | chr8.3:43031394-43031413 | MS.gene25479:intron | 30.0% | |
| TCTGTTATTCCTATCAATGA+TGG | - | chr8.3:43029237-43029256 | MS.gene25479:intron | 30.0% | |
| TGAAGTCGATGTGTTAATTA+AGG | - | chr8.3:43032264-43032283 | MS.gene25479:CDS | 30.0% | |
| TGAATGAGATCATATGTTCT+TGG | + | chr8.3:43031388-43031407 | None:intergenic | 30.0% | |
| TGACTTAGATGAATGAATAG+CGG | + | chr8.3:43031145-43031164 | None:intergenic | 30.0% | |
| TGCGAGTCAAAACTTAAATT+TGG | + | chr8.3:43028826-43028845 | None:intergenic | 30.0% | |
| TGTATAAATAAAGGGGAAAG+TGG | + | chr8.3:43030686-43030705 | None:intergenic | 30.0% | |
| TTAAATAGTCATTTGACCGA+AGG | + | chr8.3:43031453-43031472 | None:intergenic | 30.0% | |
| TTCTTTCGAAGCCAATAAAA+TGG | - | chr8.3:43031922-43031941 | MS.gene25479:CDS | 30.0% | |
| TTGTGTCAATTAAATTGGGA+CGG | - | chr8.3:43030734-43030753 | MS.gene25479:intron | 30.0% | |
| ! | AAGTACAATTTGCTCTTGAA+AGG | - | chr8.3:43029748-43029767 | MS.gene25479:intron | 30.0% |
| ! | AGTACAATTTGCTCTTGAAA+GGG | - | chr8.3:43029749-43029768 | MS.gene25479:intron | 30.0% |
| ! | ATTTGGAACTACATCACATT+CGG | + | chr8.3:43028809-43028828 | None:intergenic | 30.0% |
| ! | CTATAGTTCATGTTTTCTCT+CGG | + | chr8.3:43028970-43028989 | None:intergenic | 30.0% |
| ! | TGCAGCTAATAGTTTTTACA+TGG | + | chr8.3:43029918-43029937 | None:intergenic | 30.0% |
| ! | TTGAAATGGGTCAGTTATTT+TGG | + | chr8.3:43030583-43030602 | None:intergenic | 30.0% |
| !! | AGATATTGACACTTGTTGTA+TGG | - | chr8.3:43030508-43030527 | MS.gene25479:intron | 30.0% |
| !! | GTGCTGTTTCTTCTATATAT+TGG | - | chr8.3:43028717-43028736 | MS.gene25479:CDS | 30.0% |
| !! | TGAAATGGGTCAGTTATTTT+GGG | + | chr8.3:43030582-43030601 | None:intergenic | 30.0% |
| !! | TGTAGGTTTTAACGTAAGAT+GGG | + | chr8.3:43031720-43031739 | None:intergenic | 30.0% |
| !! | TGTTTTTATAAGCTGTCGTT+GGG | - | chr8.3:43029453-43029472 | MS.gene25479:intron | 30.0% |
| !!! | ATTTTTTTATCCAGGTGTGA+AGG | - | chr8.3:43031349-43031368 | MS.gene25479:CDS | 30.0% |
| !!! | CTTGAAATGCTTTTGTTTTG+TGG | - | chr8.3:43030853-43030872 | MS.gene25479:CDS | 30.0% |
| !!! | TCAGTTTTGTTAAACCTCAT+TGG | - | chr8.3:43029329-43029348 | MS.gene25479:intron | 30.0% |
| !!! | TTGTTTTTATAAGCTGTCGT+TGG | - | chr8.3:43029452-43029471 | MS.gene25479:intron | 30.0% |
| AAACACCTTAGTGTTCGAAT+TGG | + | chr8.3:43028881-43028900 | None:intergenic | 35.0% | |
| AAATTAGCCACAATCCAAAC+TGG | - | chr8.3:43029578-43029597 | MS.gene25479:intron | 35.0% | |
| AAGGTAAAGAAGTTAATCGG+AGG | - | chr8.3:43032283-43032302 | MS.gene25479:CDS | 35.0% | |
| ACACTCTTGTGAAACTGTTT+GGG | + | chr8.3:43029540-43029559 | None:intergenic | 35.0% | |
| ACAGCAATTAGTACTTTCTC+AGG | + | chr8.3:43032358-43032377 | None:intergenic | 35.0% | |
| ACCAGGATGATAACAAAATG+TGG | - | chr8.3:43031019-43031038 | MS.gene25479:CDS | 35.0% | |
| AGAAAATGGGTCAGTTATTC+CGG | + | chr8.3:43030547-43030566 | None:intergenic | 35.0% | |
| AGAAGGCTGAAATTGCAATT+TGG | - | chr8.3:43030169-43030188 | MS.gene25479:CDS | 35.0% | |
| AGGATAAGTAAGTGTTCCTT+CGG | - | chr8.3:43031434-43031453 | MS.gene25479:intron | 35.0% | |
| ATATATGAGCGAGGATTGAT+TGG | - | chr8.3:43031216-43031235 | MS.gene25479:CDS | 35.0% | |
| GACAAGCAGAGAGAATTAAA+AGG | + | chr8.3:43030342-43030361 | None:intergenic | 35.0% | |
| GAGGTTTAACAAAACTGATC+AGG | + | chr8.3:43029327-43029346 | None:intergenic | 35.0% | |
| GCTAATTTGAGCTTATCTAC+TGG | + | chr8.3:43029566-43029585 | None:intergenic | 35.0% | |
| GTAATATGTACAAGCCAGTT+TGG | + | chr8.3:43029595-43029614 | None:intergenic | 35.0% | |
| GTGCAGATCTTTATAGTAGT+TGG | - | chr8.3:43028691-43028710 | MS.gene25479:CDS | 35.0% | |
| TAAACACATTTCCCTCGTAT+TGG | + | chr8.3:43029155-43029174 | None:intergenic | 35.0% | |
| TAAGCCAGTTCTTATTCCAT+AGG | - | chr8.3:43031496-43031515 | MS.gene25479:intron | 35.0% | |
| TACACTCTTGTGAAACTGTT+TGG | + | chr8.3:43029541-43029560 | None:intergenic | 35.0% | |
| TAGTTGACCTTCCAATTGAT+TGG | + | chr8.3:43030057-43030076 | None:intergenic | 35.0% | |
| TATCCTGGTACAAACTAAAG+AGG | + | chr8.3:43031420-43031439 | None:intergenic | 35.0% | |
| TATGAAATTGGTCGATCATG+AGG | - | chr8.3:43032318-43032337 | MS.gene25479:CDS | 35.0% | |
| TCCATTTCAGTCCCTAAATA+TGG | - | chr8.3:43031631-43031650 | MS.gene25479:intron | 35.0% | |
| TCTTCTATATATTGGGAGCA+TGG | - | chr8.3:43028725-43028744 | MS.gene25479:CDS | 35.0% | |
| TGAATCCAATTCGAACACTA+AGG | - | chr8.3:43028873-43028892 | MS.gene25479:intron | 35.0% | |
| TGATTGGCATCTATCATGAT+TGG | - | chr8.3:43031232-43031251 | MS.gene25479:CDS | 35.0% | |
| TGCAGATGGAATGTATATGA+TGG | - | chr8.3:43029981-43030000 | MS.gene25479:CDS | 35.0% | |
| TGTAAGGTGCATTAGCATAA+GGG | + | chr8.3:43029095-43029114 | None:intergenic | 35.0% | |
| TTGAGAAGGCTATTCAGAAT+TGG | - | chr8.3:43029127-43029146 | MS.gene25479:intron | 35.0% | |
| TTGTAAGGTGCATTAGCATA+AGG | + | chr8.3:43029096-43029115 | None:intergenic | 35.0% | |
| ! | AAACAGTATTGGGTTACTGA+TGG | - | chr8.3:43032379-43032398 | MS.gene25479:CDS | 35.0% |
| ! | GATTCTTTTAGTCGTATGCT+CGG | + | chr8.3:43030466-43030485 | None:intergenic | 35.0% |
| ! | GTACAATTTGCTCTTGAAAG+GGG | - | chr8.3:43029750-43029769 | MS.gene25479:intron | 35.0% |
| ! | GTACTTTTCTCAGCTATAGT+AGG | + | chr8.3:43031186-43031205 | None:intergenic | 35.0% |
| ! | TATGGATATGAATGCTGGTT+TGG | - | chr8.3:43031107-43031126 | MS.gene25479:intron | 35.0% |
| ! | TGATGGATATGGCAACTTTA+TGG | + | chr8.3:43029805-43029824 | None:intergenic | 35.0% |
| !! | ATGGATATGAATGCTGGTTT+GGG | - | chr8.3:43031108-43031127 | MS.gene25479:intron | 35.0% |
| !! | GTGTAGGTTTTAACGTAAGA+TGG | + | chr8.3:43031721-43031740 | None:intergenic | 35.0% |
| !! | TCCACATTTTGTTATCATCC+TGG | + | chr8.3:43031023-43031042 | None:intergenic | 35.0% |
| !! | TGGAAGTTGATAGAGTTCTA+AGG | - | chr8.3:43030001-43030020 | MS.gene25479:CDS | 35.0% |
| !!! | AAAGGTGTTACATACCCTTT+TGG | + | chr8.3:43029045-43029064 | None:intergenic | 35.0% |
| !!! | CAAAGAAGTGGTTTTGGAAA+AGG | - | chr8.3:43028748-43028767 | MS.gene25479:CDS | 35.0% |
| !!! | TGCTTTTGTTTTGTGGCTAT+AGG | - | chr8.3:43030860-43030879 | MS.gene25479:CDS | 35.0% |
| AAACTGTTTGGGAGAGCTTA+TGG | + | chr8.3:43029529-43029548 | None:intergenic | 40.0% | |
| AAATTGGTCGATCATGAGGA+TGG | - | chr8.3:43032322-43032341 | MS.gene25479:CDS | 40.0% | |
| AACTTCACCCAGTATTGCAA+TGG | - | chr8.3:43031530-43031549 | MS.gene25479:intron | 40.0% | |
| AAGTTAGTAGTCTACGCCTA+TGG | + | chr8.3:43031515-43031534 | None:intergenic | 40.0% | |
| AATGTGTTTAGATTCCCTGG+TGG | - | chr8.3:43029165-43029184 | MS.gene25479:intron | 40.0% | |
| ACAGATCCCATTGCAATACT+GGG | + | chr8.3:43031540-43031559 | None:intergenic | 40.0% | |
| ACATAAACATACCCCACAAC+CGG | + | chr8.3:43029286-43029305 | None:intergenic | 40.0% | |
| ACTTCACCCAGTATTGCAAT+GGG | - | chr8.3:43031531-43031550 | MS.gene25479:intron | 40.0% | |
| AGAAGACATTCTTCTCGAGA+TGG | - | chr8.3:43032201-43032220 | MS.gene25479:CDS | 40.0% | |
| AGAGTAGCAAGTTTCTTCTG+GGG | + | chr8.3:43031692-43031711 | None:intergenic | 40.0% | |
| AGGTTGCTAAGAAACTTTGC+TGG | - | chr8.3:43030133-43030152 | MS.gene25479:CDS | 40.0% | |
| AGTACTTTCTCAGGAACAAG+AGG | + | chr8.3:43032349-43032368 | None:intergenic | 40.0% | |
| AGTTAATCGGAGGAATGAGA+TGG | - | chr8.3:43032293-43032312 | MS.gene25479:CDS | 40.0% | |
| ATAGAGCCACTAGAAACTCT+AGG | + | chr8.3:43030976-43030995 | None:intergenic | 40.0% | |
| ATCAGCACCTTGAGGAAATT+GGG | + | chr8.3:43029196-43029215 | None:intergenic | 40.0% | |
| ATCTTGACACGGAGTGTAAT+CGG | + | chr8.3:43028926-43028945 | None:intergenic | 40.0% | |
| CAATGTAACTTCTCTTCCTC+TGG | + | chr8.3:43029009-43029028 | None:intergenic | 40.0% | |
| CAGAATTGGATCCAATACGA+GGG | - | chr8.3:43029141-43029160 | MS.gene25479:intron | 40.0% | |
| CATAATGTTGCGGTATCTTC+CGG | + | chr8.3:43031091-43031110 | None:intergenic | 40.0% | |
| CCAAAAACACCAATAACAGC+AGG | + | chr8.3:43029780-43029799 | None:intergenic | 40.0% | |
| CTTATCATCGAGAGTAGTGT+AGG | + | chr8.3:43031737-43031756 | None:intergenic | 40.0% | |
| GAAAATGGGTCAGTTATTCC+GGG | + | chr8.3:43030546-43030565 | None:intergenic | 40.0% | |
| GAAGGAACACTTACTTATCC+TGG | + | chr8.3:43031435-43031454 | None:intergenic | 40.0% | |
| GAGAGTAGCAAGTTTCTTCT+GGG | + | chr8.3:43031693-43031712 | None:intergenic | 40.0% | |
| GCATATAGCCTGTTTGGAAA+TGG | + | chr8.3:43030946-43030965 | None:intergenic | 40.0% | |
| GCCATATTTAGGGACTGAAA+TGG | + | chr8.3:43031635-43031654 | None:intergenic | 40.0% | |
| GGAAATGTGTTTAGATTCCC+TGG | - | chr8.3:43029162-43029181 | MS.gene25479:intron | 40.0% | |
| GGATTCGCAAAATTCTACAC+TGG | + | chr8.3:43030241-43030260 | None:intergenic | 40.0% | |
| GGCATCTATCATGATTGGTA+TGG | - | chr8.3:43031237-43031256 | MS.gene25479:CDS | 40.0% | |
| GGTTGCTAAGAAACTTTGCT+GGG | - | chr8.3:43030134-43030153 | MS.gene25479:CDS | 40.0% | |
| GTTATCATCCTGGTATGTCT+CGG | + | chr8.3:43031013-43031032 | None:intergenic | 40.0% | |
| TACAGATCCCATTGCAATAC+TGG | + | chr8.3:43031541-43031560 | None:intergenic | 40.0% | |
| TACGCCTATGGAATAAGAAC+TGG | + | chr8.3:43031503-43031522 | None:intergenic | 40.0% | |
| TATCAGCACCTTGAGGAAAT+TGG | + | chr8.3:43029197-43029216 | None:intergenic | 40.0% | |
| TCAACTGTGAGACTCTTGTA+AGG | + | chr8.3:43029111-43029130 | None:intergenic | 40.0% | |
| TCAGAATTGGATCCAATACG+AGG | - | chr8.3:43029140-43029159 | MS.gene25479:intron | 40.0% | |
| TGAGTCTCCAAACTGTTACA+TGG | - | chr8.3:43031575-43031594 | MS.gene25479:intron | 40.0% | |
| TGTCAATTAAATTGGGACGG+AGG | - | chr8.3:43030737-43030756 | MS.gene25479:intron | 40.0% | |
| TTCTCGCTGTTTGATTCCAT+GGG | - | chr8.3:43029848-43029867 | MS.gene25479:CDS | 40.0% | |
| TTGACCTTCCAATTGATTGG+AGG | + | chr8.3:43030054-43030073 | None:intergenic | 40.0% | |
| TTGTCTGCTACGACATGATT+CGG | + | chr8.3:43030211-43030230 | None:intergenic | 40.0% | |
| TTTGACTAACTTCACCAGCA+TGG | + | chr8.3:43028849-43028868 | None:intergenic | 40.0% | |
| ! | AACCAAGTGCTGCTGATAAT+AGG | - | chr8.3:43028656-43028675 | MS.gene25479:CDS | 40.0% |
| ! | ATAGCTGAGAAAAGTACGCT+CGG | - | chr8.3:43031189-43031208 | MS.gene25479:intron | 40.0% |
| ! | ATATGTCAGGTTGCAAGTTG+GGG | - | chr8.3:43029660-43029679 | MS.gene25479:CDS | 40.0% |
| ! | CATATGTCAGGTTGCAAGTT+GGG | - | chr8.3:43029659-43029678 | MS.gene25479:CDS | 40.0% |
| ! | GGTATGTAACACCTTTTCCA+TGG | - | chr8.3:43029049-43029068 | MS.gene25479:intron | 40.0% |
| ! | TCATATGTCAGGTTGCAAGT+TGG | - | chr8.3:43029658-43029677 | MS.gene25479:CDS | 40.0% |
| ! | TTTCTGGTCCTCCAATCAAT+TGG | - | chr8.3:43030043-43030062 | MS.gene25479:CDS | 40.0% |
| ! | TTTTCCATGGCCTAAGAGTA+GGG | - | chr8.3:43029062-43029081 | MS.gene25479:intron | 40.0% |
| !! | AAGCACTTTTTACCTGTGCT+TGG | - | chr8.3:43031603-43031622 | MS.gene25479:intron | 40.0% |
| !! | AGCACTTTTTACCTGTGCTT+GGG | - | chr8.3:43031604-43031623 | MS.gene25479:intron | 40.0% |
| !! | AGGTTTTAACGTAAGATGGG+AGG | + | chr8.3:43031717-43031736 | None:intergenic | 40.0% |
| !! | CCTGCTGTTATTGGTGTTTT+TGG | - | chr8.3:43029777-43029796 | MS.gene25479:intron | 40.0% |
| !! | GGTTTTAACGTAAGATGGGA+GGG | + | chr8.3:43031716-43031735 | None:intergenic | 40.0% |
| !! | GTTTTAACGTAAGATGGGAG+GGG | + | chr8.3:43031715-43031734 | None:intergenic | 40.0% |
| !! | TTAACACATCGACTTCATCG+CGG | + | chr8.3:43032261-43032280 | None:intergenic | 40.0% |
| !! | TTTGGCTGTTGATTTGCAGA+TGG | - | chr8.3:43029967-43029986 | MS.gene25479:CDS | 40.0% |
| !!! | TTACATACCCTTTTGGTGCT+GGG | + | chr8.3:43029038-43029057 | None:intergenic | 40.0% |
| ACACTCCGTGTCAAGATCAA+CGG | - | chr8.3:43028929-43028948 | MS.gene25479:intron | 45.0% | |
| ACTCCGACTCCTAAAGTTTC+TGG | - | chr8.3:43030907-43030926 | MS.gene25479:CDS | 45.0% | |
| AGAACAATGAGCCATGTCGA+AGG | + | chr8.3:43029832-43029851 | None:intergenic | 45.0% | |
| AGTTTCTTCCGAGACATACC+AGG | - | chr8.3:43031002-43031021 | MS.gene25479:CDS | 45.0% | |
| CAAGAGTCTCACAGTTGAGA+AGG | - | chr8.3:43029113-43029132 | MS.gene25479:intron | 45.0% | |
| CATGCATACCAGACATCATC+AGG | + | chr8.3:43030270-43030289 | None:intergenic | 45.0% | |
| CGGAAGATACCGCAACATTA+TGG | - | chr8.3:43031089-43031108 | MS.gene25479:intron | 45.0% | |
| CTACTCTTAGGCCATGGAAA+AGG | + | chr8.3:43029063-43029082 | None:intergenic | 45.0% | |
| CTCACTGTCCCATCATTGAT+AGG | + | chr8.3:43029249-43029268 | None:intergenic | 45.0% | |
| GGAAGGTCAACTACAAACCA+TGG | - | chr8.3:43030064-43030083 | MS.gene25479:CDS | 45.0% | |
| GGAGAGTAGCAAGTTTCTTC+TGG | + | chr8.3:43031694-43031713 | None:intergenic | 45.0% | |
| GGGACATAATCCCTACTCTT+AGG | + | chr8.3:43029075-43029094 | None:intergenic | 45.0% | |
| GTACAAGCCAGTTTGGATTG+TGG | + | chr8.3:43029588-43029607 | None:intergenic | 45.0% | |
| GTATGATCCCAGCACCAAAA+GGG | - | chr8.3:43029028-43029047 | MS.gene25479:intron | 45.0% | |
| GTCCTATTATCAGCAGCACT+TGG | + | chr8.3:43028661-43028680 | None:intergenic | 45.0% | |
| GTTCTCGCTGTTTGATTCCA+TGG | - | chr8.3:43029847-43029866 | MS.gene25479:CDS | 45.0% | |
| TAAACCTCATTGGCGCTGTT+TGG | - | chr8.3:43029339-43029358 | MS.gene25479:intron | 45.0% | |
| TAATCCCTACTCTTAGGCCA+TGG | + | chr8.3:43029069-43029088 | None:intergenic | 45.0% | |
| TATGTCTCGGAAGAAACTCC+AGG | + | chr8.3:43031000-43031019 | None:intergenic | 45.0% | |
| TCGGTATAACGAGCATCACA+AGG | + | chr8.3:43028907-43028926 | None:intergenic | 45.0% | |
| TCTCGCTGTTTGATTCCATG+GGG | - | chr8.3:43029849-43029868 | MS.gene25479:CDS | 45.0% | |
| TCTTCCTCAAGTTCCTCCTT+TGG | + | chr8.3:43030096-43030115 | None:intergenic | 45.0% | |
| TGGTCCTCCAATCAATTGGA+AGG | - | chr8.3:43030047-43030066 | MS.gene25479:CDS | 45.0% | |
| TGTAACTTCTCTTCCTCTGG+AGG | + | chr8.3:43029006-43029025 | None:intergenic | 45.0% | |
| TGTATGATCCCAGCACCAAA+AGG | - | chr8.3:43029027-43029046 | MS.gene25479:intron | 45.0% | |
| TTAACCAAACAGCGCCAATG+AGG | + | chr8.3:43029346-43029365 | None:intergenic | 45.0% | |
| TTCTTACCATTTGCTCCCCA+TGG | + | chr8.3:43029867-43029886 | None:intergenic | 45.0% | |
| TTGATTCCATGGGGAGCAAA+TGG | - | chr8.3:43029858-43029877 | MS.gene25479:CDS | 45.0% | |
| ! | AGCCACTAGAAACTCTAGGA+GGG | + | chr8.3:43030972-43030991 | None:intergenic | 45.0% |
| ! | ATCCCTCCTAGAGTTTCTAG+TGG | - | chr8.3:43030967-43030986 | MS.gene25479:CDS | 45.0% |
| ! | CAAGTTGGGGTGCATATCTT+TGG | - | chr8.3:43029673-43029692 | MS.gene25479:CDS | 45.0% |
| ! | CTATCAATGATGGGACAGTG+AGG | - | chr8.3:43029247-43029266 | MS.gene25479:intron | 45.0% |
| ! | CTTTTCCATGGCCTAAGAGT+AGG | - | chr8.3:43029061-43029080 | MS.gene25479:intron | 45.0% |
| ! | GCATGGCAAAGAAGTGGTTT+TGG | - | chr8.3:43028742-43028761 | MS.gene25479:CDS | 45.0% |
| ! | TCGAAGGCTCTTGATGGATA+TGG | + | chr8.3:43029816-43029835 | None:intergenic | 45.0% |
| ! | TCTAAGGCCTGGTGGTTATT+GGG | - | chr8.3:43030017-43030036 | MS.gene25479:CDS | 45.0% |
| !! | GTTACATACCCTTTTGGTGC+TGG | + | chr8.3:43029039-43029058 | None:intergenic | 45.0% |
| !! | GTTGATAGAGTTCTAAGGCC+TGG | - | chr8.3:43030006-43030025 | MS.gene25479:CDS | 45.0% |
| !! | GTTTCTAGTGGCTCTATTCC+TGG | - | chr8.3:43030979-43030998 | MS.gene25479:CDS | 45.0% |
| !! | TGGCCTCTTTAGTTTGTACC+AGG | - | chr8.3:43031414-43031433 | MS.gene25479:intron | 45.0% |
| !! | TTCTAAGGCCTGGTGGTTAT+TGG | - | chr8.3:43030016-43030035 | MS.gene25479:CDS | 45.0% |
| !!! | TTTTTTCATATTTTTTATAA+TGG | + | chr8.3:43031657-43031676 | None:intergenic | 5.0% |
| AAATGGACACACCCAAGCAC+AGG | + | chr8.3:43031618-43031637 | None:intergenic | 50.0% | |
| AGATCGCCGCCAGAAACTTT+AGG | + | chr8.3:43030919-43030938 | None:intergenic | 50.0% | |
| ATGGGTCAGTTATTCCGGGA+CGG | + | chr8.3:43030542-43030561 | None:intergenic | 50.0% | |
| CAAACCATGGCAGAGACCAA+AGG | - | chr8.3:43030077-43030096 | MS.gene25479:CDS | 50.0% | |
| CCAGACATCATCAGGATCTG+AGG | + | chr8.3:43030262-43030281 | None:intergenic | 50.0% | |
| CGCCTTCTGGTCGCAATATT+CGG | + | chr8.3:43032228-43032247 | None:intergenic | 50.0% | |
| CTGGGAGAAGAAGTCTGAGA+AGG | - | chr8.3:43030152-43030171 | MS.gene25479:CDS | 50.0% | |
| GAAATTGGGTTCCACCACCA+GGG | + | chr8.3:43029182-43029201 | None:intergenic | 50.0% | |
| GACCGAATATTGCGACCAGA+AGG | - | chr8.3:43032223-43032242 | MS.gene25479:CDS | 50.0% | |
| GAGACCAAAGGAGGAACTTG+AGG | - | chr8.3:43030089-43030108 | MS.gene25479:CDS | 50.0% | |
| GAGCCACTAGAAACTCTAGG+AGG | + | chr8.3:43030973-43030992 | None:intergenic | 50.0% | |
| GGGATCGCATATAGCCTGTT+TGG | + | chr8.3:43030952-43030971 | None:intergenic | 50.0% | |
| GGTGGAACCCAATTTCCTCA+AGG | - | chr8.3:43029186-43029205 | MS.gene25479:intron | 50.0% | |
| GGTGGTTATTGGGTGCTTTC+TGG | - | chr8.3:43030027-43030046 | MS.gene25479:CDS | 50.0% | |
| GTGTTTAGATTCCCTGGTGG+TGG | - | chr8.3:43029168-43029187 | MS.gene25479:intron | 50.0% | |
| TAGTCGTATGCTCGGATGCA+TGG | + | chr8.3:43030458-43030477 | None:intergenic | 50.0% | |
| TCCATCAAGAGCCTTCGACA+TGG | - | chr8.3:43029818-43029837 | MS.gene25479:intron | 50.0% | |
| TGTGGAAAAGCCTTCACACC+TGG | + | chr8.3:43031362-43031381 | None:intergenic | 50.0% | |
| ! | AGGGGTGTACCTGCTGTTAT+TGG | - | chr8.3:43029768-43029787 | MS.gene25479:intron | 50.0% |
| ! | CAATGATGGGACAGTGAGGA+CGG | - | chr8.3:43029251-43029270 | MS.gene25479:intron | 50.0% |
| ! | CCGACTCCTAAAGTTTCTGG+CGG | - | chr8.3:43030910-43030929 | MS.gene25479:CDS | 50.0% |
| ! | CCGCCAGAAACTTTAGGAGT+CGG | + | chr8.3:43030913-43030932 | None:intergenic | 50.0% |
| ! | CCTCAGATCCTGATGATGTC+TGG | - | chr8.3:43030259-43030278 | MS.gene25479:intron | 50.0% |
| ! | CTCGGTGTGATATATGAGCG+AGG | - | chr8.3:43031207-43031226 | MS.gene25479:CDS | 50.0% |
| ! | TGCCATGTCATTTGCACCGA+GGG | - | chr8.3:43029710-43029729 | MS.gene25479:intron | 50.0% |
| ! | TTGCCATGTCATTTGCACCG+AGG | - | chr8.3:43029709-43029728 | MS.gene25479:intron | 50.0% |
| ! | TTGGGAGCATGGCAAAGAAG+TGG | - | chr8.3:43028736-43028755 | MS.gene25479:CDS | 50.0% |
| !! | AGCAAGTTTCTTCTGGGGCA+GGG | + | chr8.3:43031687-43031706 | None:intergenic | 50.0% |
| !! | GAAAGCACCCAATAACCACC+AGG | + | chr8.3:43030027-43030046 | None:intergenic | 50.0% |
| !! | GATAGAGTTCTAAGGCCTGG+TGG | - | chr8.3:43030009-43030028 | MS.gene25479:CDS | 50.0% |
| !! | GCTACGACATGATTCGGTGT+CGG | + | chr8.3:43030205-43030224 | None:intergenic | 50.0% |
| !! | TAGCAAGTTTCTTCTGGGGC+AGG | + | chr8.3:43031688-43031707 | None:intergenic | 50.0% |
| !!! | AGTTTTGACTCGCACCATGC+TGG | - | chr8.3:43028832-43028851 | MS.gene25479:CDS | 50.0% |
| ACCATGGCAGAGACCAAAGG+AGG | - | chr8.3:43030080-43030099 | MS.gene25479:CDS | 55.0% | |
| AGAGAGACACTGTCCTCCAG+AGG | - | chr8.3:43028990-43029009 | MS.gene25479:intron | 55.0% | |
| CGGATTATGACAGCGCCTTC+TGG | + | chr8.3:43032241-43032260 | None:intergenic | 55.0% | |
| GCACGCCGTTGATCTTGACA+CGG | + | chr8.3:43028937-43028956 | None:intergenic | 55.0% | |
| GCCATGTCGAAGGCTCTTGA+TGG | + | chr8.3:43029822-43029841 | None:intergenic | 55.0% | |
| GGAAATTGGGTTCCACCACC+AGG | + | chr8.3:43029183-43029202 | None:intergenic | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | + | chr8.3:43030538-43030557 | None:intergenic | 55.0% | |
| TCCTCCTTTGGTCTCTGCCA+TGG | + | chr8.3:43030084-43030103 | None:intergenic | 55.0% | |
| TGTGCTTCGTGAGAGTCCCT+CGG | + | chr8.3:43029729-43029748 | None:intergenic | 55.0% | |
| ! | GTCCCTCGGTGCAAATGACA+TGG | + | chr8.3:43029715-43029734 | None:intergenic | 55.0% |
| GGTCAGTTATTCCGGGACGG+AGG | + | chr8.3:43030539-43030558 | None:intergenic | 60.0% | |
| GTATGGTACTCCCTCCGTCC+CGG | - | chr8.3:43030525-43030544 | MS.gene25479:intron | 60.0% | |
| GTGAGGACGGCACTCGACAC+CGG | - | chr8.3:43029264-43029283 | MS.gene25479:intron | 65.0% | |
| ! | ACGGCACTCGACACCGGTTG+TGG | - | chr8.3:43029270-43029289 | MS.gene25479:intron | 65.0% |
| ! | CGGCACTCGACACCGGTTGT+GGG | - | chr8.3:43029271-43029290 | MS.gene25479:intron | 65.0% |
| ! | GGCACTCGACACCGGTTGTG+GGG | - | chr8.3:43029272-43029291 | MS.gene25479:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 43028649 | 43032423 | 43028649 | ID=MS.gene25479 |
| chr8.3 | mRNA | 43028649 | 43032423 | 43028649 | ID=MS.gene25479.t1;Parent=MS.gene25479 |
| chr8.3 | exon | 43031779 | 43032423 | 43031779 | ID=MS.gene25479.t1.exon1;Parent=MS.gene25479.t1 |
| chr8.3 | CDS | 43031779 | 43032423 | 43031779 | ID=cds.MS.gene25479.t1;Parent=MS.gene25479.t1 |
| chr8.3 | exon | 43031193 | 43031403 | 43031193 | ID=MS.gene25479.t1.exon2;Parent=MS.gene25479.t1 |
| chr8.3 | CDS | 43031193 | 43031403 | 43031193 | ID=cds.MS.gene25479.t1;Parent=MS.gene25479.t1 |
| chr8.3 | exon | 43030792 | 43031086 | 43030792 | ID=MS.gene25479.t1.exon3;Parent=MS.gene25479.t1 |
| chr8.3 | CDS | 43030792 | 43031086 | 43030792 | ID=cds.MS.gene25479.t1;Parent=MS.gene25479.t1 |
| chr8.3 | exon | 43029819 | 43030190 | 43029819 | ID=MS.gene25479.t1.exon4;Parent=MS.gene25479.t1 |
| chr8.3 | CDS | 43029819 | 43030190 | 43029819 | ID=cds.MS.gene25479.t1;Parent=MS.gene25479.t1 |
| chr8.3 | exon | 43029632 | 43029709 | 43029632 | ID=MS.gene25479.t1.exon5;Parent=MS.gene25479.t1 |
| chr8.3 | CDS | 43029632 | 43029709 | 43029632 | ID=cds.MS.gene25479.t1;Parent=MS.gene25479.t1 |
| chr8.3 | exon | 43028649 | 43028880 | 43028649 | ID=MS.gene25479.t1.exon6;Parent=MS.gene25479.t1 |
| chr8.3 | CDS | 43028649 | 43028880 | 43028649 | ID=cds.MS.gene25479.t1;Parent=MS.gene25479.t1 |
| Gene Sequence |
| Protein sequence |