AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene011629

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene011629.t1 MTR_4g098890 98.835 601 7 0 1 601 1 601 0.0 1254
MS.gene011629.t1 MTR_8g055840 68.071 617 182 6 3 613 2 609 0.0 910
MS.gene011629.t1 MTR_5g040360 66.288 617 192 6 3 613 2 608 0.0 884
MS.gene011629.t1 MTR_3g040370 63.592 618 208 7 1 613 1 606 0.0 834
MS.gene011629.t1 MTR_8g100075 56.260 615 239 7 18 612 25 629 0.0 739
MS.gene011629.t1 MTR_7g076170 56.683 621 246 7 5 605 10 627 0.0 733
MS.gene011629.t1 MTR_0019s0120 56.209 612 249 6 17 612 27 635 0.0 730
MS.gene011629.t1 MTR_1g101370 57.167 600 249 4 13 604 19 618 0.0 728
MS.gene011629.t1 MTR_8g432680 54.173 611 252 6 18 605 27 632 0.0 696
MS.gene011629.t1 MTR_7g006060 52.841 528 238 4 82 598 39 566 0.0 595
MS.gene011629.t1 MTR_0019s0120 54.403 511 214 6 17 511 27 534 0.0 583
MS.gene011629.t1 MTR_8g071280 47.932 532 264 6 86 610 70 595 2.85e-178 518
MS.gene011629.t1 MTR_5g026930 44.243 608 309 11 10 610 13 597 3.09e-173 505
MS.gene011629.t1 MTR_7g076150 45.936 566 259 13 60 603 47 587 9.25e-167 488
MS.gene011629.t1 MTR_8g432620 44.102 551 276 9 67 604 70 601 1.20e-166 488
MS.gene011629.t1 MTR_5g080720 43.178 535 270 12 82 600 121 637 1.43e-151 451
MS.gene011629.t1 MTR_1g442840 42.173 543 280 11 84 606 90 618 4.70e-149 444
MS.gene011629.t1 MTR_1g442840 43.725 510 257 10 113 606 10 505 3.65e-147 436
MS.gene011629.t1 MTR_1g075900 41.261 555 292 11 72 606 77 617 4.67e-146 437
MS.gene011629.t1 MTR_3g068990 43.126 531 274 12 84 601 151 666 1.55e-144 434
MS.gene011629.t1 MTR_1g069785 40.255 549 294 11 84 612 60 594 8.23e-144 430
MS.gene011629.t1 MTR_1g029730 44.030 536 263 14 86 602 141 658 5.08e-143 430
MS.gene011629.t1 MTR_7g076150 47.974 469 199 12 155 603 1 444 6.16e-143 422
MS.gene011629.t1 MTR_3g096480 44.343 548 266 16 76 603 248 776 2.26e-141 430
MS.gene011629.t1 MTR_5g026930 44.204 509 255 10 10 511 13 499 8.16e-141 419
MS.gene011629.t1 MTR_8g093880 42.486 539 269 15 86 603 288 806 9.47e-135 414
MS.gene011629.t1 MTR_8g076650 44.078 515 259 13 95 594 387 887 5.59e-133 411
MS.gene011629.t1 MTR_1g051055 41.078 538 271 12 89 603 89 603 1.45e-132 401
MS.gene011629.t1 MTR_5g083150 39.811 530 282 14 94 610 100 605 4.91e-131 397
MS.gene011629.t1 MTR_5g080720 43.158 475 236 12 82 540 121 577 2.07e-130 395
MS.gene011629.t1 MTR_5g021100 41.714 525 271 14 89 594 322 830 1.90e-129 400
MS.gene011629.t1 MTR_3g088790 39.405 538 288 15 86 603 223 742 2.85e-123 382
MS.gene011629.t1 MTR_3g071530 39.400 500 274 12 91 579 149 630 5.23e-122 375
MS.gene011629.t1 MTR_1g022255 35.581 534 295 15 86 603 199 699 7.93e-96 309
MS.gene011629.t1 MTR_3g074780 32.200 559 322 17 82 603 150 688 6.22e-91 295
MS.gene011629.t1 MTR_4g083030 31.639 610 364 15 16 602 24 603 1.95e-90 292
MS.gene011629.t1 MTR_5g064080 31.794 563 321 18 76 603 136 670 3.27e-88 288
MS.gene011629.t1 MTR_1g022255 30.846 402 234 13 86 472 199 571 1.80e-46 173
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene011629.t1 AT4G18030 74.794 607 149 3 1 605 1 605 0.0 970
MS.gene011629.t1 AT1G26850 68.720 617 184 5 1 610 1 615 0.0 912
MS.gene011629.t1 AT1G26850 68.720 617 184 5 1 610 1 615 0.0 912
MS.gene011629.t1 AT4G10440 56.981 616 240 6 11 609 15 622 0.0 753
MS.gene011629.t1 AT1G33170 54.874 636 253 6 3 607 6 638 0.0 729
MS.gene011629.t1 AT1G26850 67.723 505 154 5 1 498 1 503 0.0 725
MS.gene011629.t1 AT4G00750 55.025 607 261 6 18 612 25 631 0.0 716
MS.gene011629.t1 AT2G45750 54.248 612 263 8 18 613 19 629 0.0 689
MS.gene011629.t1 AT2G43200 51.731 520 240 5 86 598 91 606 0.0 563
MS.gene011629.t1 AT2G43200 51.731 520 240 5 86 598 91 606 0.0 563
MS.gene011629.t1 AT1G31850 44.928 621 309 13 2 610 4 603 0.0 538
MS.gene011629.t1 AT1G31850 44.928 621 309 13 2 610 4 603 0.0 538
MS.gene011629.t1 AT1G31850 44.928 621 309 13 2 610 4 603 0.0 538
MS.gene011629.t1 AT1G31850 44.928 621 309 13 2 610 4 603 0.0 538
MS.gene011629.t1 AT4G19120 44.545 550 290 6 73 613 57 600 7.21e-178 517
MS.gene011629.t1 AT4G19120 44.545 550 290 6 73 613 57 600 7.21e-178 517
MS.gene011629.t1 AT4G00740 44.505 546 275 9 69 603 65 593 5.14e-162 477
MS.gene011629.t1 AT4G00740 44.505 546 275 9 69 603 65 593 5.14e-162 477
MS.gene011629.t1 AT1G04430 38.622 624 342 12 9 606 8 616 2.46e-146 437
MS.gene011629.t1 AT1G04430 38.622 624 342 12 9 606 8 616 2.46e-146 437
MS.gene011629.t1 AT1G04430 38.622 624 342 12 9 606 8 616 2.46e-146 437
MS.gene011629.t1 AT5G06050 42.752 545 262 14 82 602 145 663 5.23e-146 438
MS.gene011629.t1 AT4G19120 45.759 448 229 5 73 511 57 499 7.65e-146 432
MS.gene011629.t1 AT2G39750 41.516 554 282 12 69 600 156 689 5.35e-144 434
MS.gene011629.t1 AT4G14360 42.690 513 263 10 84 579 74 572 7.05e-144 431
MS.gene011629.t1 AT4G14360 42.690 513 263 10 84 579 74 572 7.05e-144 431
MS.gene011629.t1 AT3G23300 40.433 554 297 11 72 606 65 604 1.63e-143 430
MS.gene011629.t1 AT3G23300 40.433 554 297 11 72 606 65 604 1.63e-143 430
MS.gene011629.t1 AT1G77260 43.097 536 259 15 86 600 143 653 2.67e-142 428
MS.gene011629.t1 AT1G29470 43.885 556 267 18 73 603 222 757 1.13e-139 425
MS.gene011629.t1 AT1G29470 43.885 556 267 18 73 603 222 757 1.13e-139 425
MS.gene011629.t1 AT5G14430 39.016 610 324 16 16 603 21 604 5.43e-136 410
MS.gene011629.t1 AT2G34300 42.937 538 267 15 86 603 240 757 1.72e-135 414
MS.gene011629.t1 AT2G34300 42.937 538 267 15 86 603 240 757 1.72e-135 414
MS.gene011629.t1 AT2G34300 42.937 538 267 15 86 603 240 757 1.72e-135 414
MS.gene011629.t1 AT5G04060 39.962 533 283 10 88 603 85 597 4.80e-135 407
MS.gene011629.t1 AT5G14430 38.689 610 326 16 16 603 21 604 3.50e-134 405
MS.gene011629.t1 AT3G56080 42.032 502 257 12 95 582 114 595 6.57e-134 405
MS.gene011629.t1 AT3G10200 40.706 538 287 11 81 603 68 588 1.99e-133 403
MS.gene011629.t1 AT5G64030 42.694 527 266 15 95 603 308 816 8.35e-133 409
MS.gene011629.t1 AT3G51070 42.453 530 265 14 94 603 380 889 5.60e-129 401
MS.gene011629.t1 AT2G40280 40.421 522 270 13 94 603 89 581 2.33e-127 387
MS.gene011629.t1 AT3G10200 40.234 512 273 11 81 576 68 562 1.48e-125 383
MS.gene011629.t1 AT3G56080 43.142 452 223 12 95 532 114 545 3.46e-119 365
MS.gene011629.t1 AT3G51070 43.982 457 224 12 94 532 380 822 9.75e-112 354
MS.gene011629.t1 AT1G19430 35.609 542 298 17 80 603 214 722 1.55e-94 306
MS.gene011629.t1 AT1G19430 35.609 542 298 17 80 603 214 722 1.55e-94 306
MS.gene011629.t1 AT1G13860 32.072 555 308 13 82 600 77 598 1.42e-89 290
MS.gene011629.t1 AT1G13860 32.072 555 308 13 82 600 77 598 1.42e-89 290
MS.gene011629.t1 AT1G13860 32.072 555 308 13 82 600 77 598 1.42e-89 290
MS.gene011629.t1 AT1G13860 32.072 555 308 13 82 600 77 598 1.42e-89 290
MS.gene011629.t1 AT1G78240 32.671 554 319 16 84 602 144 678 5.10e-89 290
MS.gene011629.t1 AT1G78240 32.671 554 319 16 84 602 144 678 5.10e-89 290
MS.gene011629.t1 AT2G03480 31.942 551 301 13 84 602 84 592 4.04e-86 280
MS.gene011629.t1 AT2G03480 32.545 550 310 14 84 602 84 603 1.50e-84 276
MS.gene011629.t1 AT1G13860 33.550 462 252 11 172 600 3 442 1.32e-79 259
MS.gene011629.t1 AT1G19430 31.873 411 234 15 80 473 214 595 2.02e-48 179
MS.gene011629.t1 AT2G03480 30.282 284 184 3 84 358 84 362 4.16e-41 155

Find 161 sgRNAs with CRISPR-Local

Find 270 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTATCTAAATCACATAAAT+TGG 0.157551 8.2:-23408475 None:intergenic
CCTGCTATTATTGGTGTTCT+TGG 0.181876 8.2:+23407950 MS.gene011629:CDS
TGCAAGGCTGTCTCCCTTTC+CGG 0.190229 8.2:-23406887 None:intergenic
TATCTGGCCCTCCAATTAAT+TGG 0.198353 8.2:+23408286 MS.gene011629:CDS
ATCAAGAGGACAACAAATTA+TGG 0.295703 8.2:+23408827 MS.gene011629:CDS
ACAAGGTTCAGAAAATTGTT+AGG 0.303090 8.2:+23409823 MS.gene011629:CDS
TAGAGATGGACCGCATATTA+AGG 0.304977 8.2:+23409757 MS.gene011629:CDS
CTAATACCATGGGCTGAAAA+TGG 0.306663 8.2:+23408031 MS.gene011629:CDS
TCTCTAAAAGGATGTCTTCT+AGG 0.313204 8.2:-23409740 None:intergenic
CAAACTGAACTTGTGCTTCA+TGG 0.317331 8.2:-23407910 None:intergenic
GGCTGGTTACCTCGGGGATA+GGG 0.326072 8.2:-23408699 None:intergenic
CCTTCGTTCGCTTCCATGTT+TGG 0.326669 8.2:-23408320 None:intergenic
ATATGCGGTCCATCTCTAAA+AGG 0.333621 8.2:-23409752 None:intergenic
CTAGAGAAAACATGATCTAT+AGG 0.334371 8.2:+23407097 MS.gene011629:CDS
TGGAGAAGGCTAATCAAAAC+TGG 0.334883 8.2:+23407256 MS.gene011629:CDS
CGAGGGGTACCTGCTATTAT+TGG 0.338287 8.2:+23407941 MS.gene011629:CDS
ATAACGTCTTTAGCTATTCT+AGG 0.339212 8.2:-23408781 None:intergenic
TACAATAACCAATATCTTCT+CGG 0.340229 8.2:-23409898 None:intergenic
GATTATGCAGGTTGCGAGTT+GGG 0.346051 8.2:+23407832 MS.gene011629:intron
ACAATTGCTGACAACACTTT+AGG 0.348076 8.2:+23408994 MS.gene011629:CDS
GGTTATTGTAAAAGAGTATT+GGG 0.355588 8.2:+23409911 MS.gene011629:CDS
ATTTGCACCCGAGAAGATAT+TGG 0.359714 8.2:+23409890 MS.gene011629:CDS
AATGAGATGGGAATCTAAAA+TGG 0.360431 8.2:+23409848 MS.gene011629:CDS
AATTTCTACATATTTGTGTT+GGG 0.361502 8.2:-23406974 None:intergenic
CGGATTATGACCGATCCTTC+TGG 0.383497 8.2:-23409780 None:intergenic
GGGAATGTGTTCAAATTTCC+AGG 0.385082 8.2:+23407291 MS.gene011629:CDS
TAGAGAAAACATGATCTATA+GGG 0.387569 8.2:+23407098 MS.gene011629:CDS
AATATCTTCTCGGGTGCAAA+TGG 0.387847 8.2:-23409888 None:intergenic
CAAGGTTCAGAAAATTGTTA+GGG 0.396641 8.2:+23409824 MS.gene011629:CDS
TCCGGCAACTTCACTTTGGC+TGG 0.396919 8.2:-23408716 None:intergenic
TGGCTGGTTACCTCGGGGAT+AGG 0.400033 8.2:-23408700 None:intergenic
ATAGCTAAAGACGTTATTCC+AGG 0.406709 8.2:+23408787 MS.gene011629:CDS
TCACTTTGGCTGGTTACCTC+GGG 0.406855 8.2:-23408706 None:intergenic
AAAGGAGTCGTGTACCCTTC+GGG 0.407789 8.2:-23407171 None:intergenic
CTGACAGTACCATCTTTGAT+TGG 0.409983 8.2:-23407375 None:intergenic
AAAAGGGCGATATCGCTATC+TGG 0.411310 8.2:+23408412 MS.gene011629:CDS
TAGATAATGCTGATGATGTT+TGG 0.414758 8.2:+23408490 MS.gene011629:CDS
GGGAGACAGCCTTGCATTGA+AGG 0.415396 8.2:+23406894 MS.gene011629:CDS
GTTCTCGTTGTCTAATACCA+TGG 0.415422 8.2:+23408020 MS.gene011629:CDS
CCGTGCTCTGTTGCCCGGTA+AGG 0.424595 8.2:-23406788 None:intergenic
TGGGGTTCAAAATTCAAATT+CGG 0.428738 8.2:-23406955 None:intergenic
ATCTAGCCGAAAGTCTTTGC+TGG 0.428753 8.2:+23408376 MS.gene011629:CDS
CTCTAGGGAATGTCATTGCT+CGG 0.429428 8.2:-23407080 None:intergenic
CAGCATTGGACACTGGTTGC+GGG 0.430729 8.2:+23407400 MS.gene011629:CDS
TCCACTGTCAGATGCTTGTA+AGG 0.431312 8.2:-23407237 None:intergenic
CAAAACTGGGTGAAATTTGA+AGG 0.440422 8.2:+23407270 MS.gene011629:CDS
TCATTGCTCGGTCTTGCTCT+TGG 0.442210 8.2:-23407068 None:intergenic
TGTGCTTCATGGTTATCCTT+CGG 0.442466 8.2:-23407899 None:intergenic
GTAAGGAACATTAGCATAGT+AGG 0.443219 8.2:-23407220 None:intergenic
TAAAGTGTTGTCAGCAATTG+TGG 0.446000 8.2:-23408992 None:intergenic
GTCGTGTACCCTTCGGGAGC+AGG 0.448795 8.2:-23407165 None:intergenic
AAAAGGAGTCGTGTACCCTT+CGG 0.449355 8.2:-23407172 None:intergenic
TGGTTATTGTAAAAGAGTAT+TGG 0.449942 8.2:+23409910 MS.gene011629:CDS
TTCACTTTGGCTGGTTACCT+CGG 0.450057 8.2:-23408707 None:intergenic
ACCGAAAGCTAAAATGTTCA+AGG 0.457641 8.2:+23407011 MS.gene011629:CDS
ACAATAACCAATATCTTCTC+GGG 0.458082 8.2:-23409897 None:intergenic
CTCCTCCGGCAACTTCACTT+TGG 0.458578 8.2:-23408720 None:intergenic
CAATTTCTACATATTTGTGT+TGG 0.459965 8.2:-23406975 None:intergenic
ATCTATGAAAGAGGTCTCAT+TGG 0.460262 8.2:+23409021 MS.gene011629:CDS
TGCAGAGGGCATGTATCTAA+TGG 0.460772 8.2:+23408224 MS.gene011629:intron
ATGGACATGAATGCAGGCCT+TGG 0.463464 8.2:+23408916 MS.gene011629:CDS
ACATGGCAAAGCAGTGGTTC+CGG 0.463502 8.2:+23406868 MS.gene011629:CDS
GGCCTCCGTGCTCTGTTGCC+CGG 0.469795 8.2:-23406793 None:intergenic
TTAGGTGTTATCTATGAAAG+AGG 0.473905 8.2:+23409012 MS.gene011629:CDS
CAAAGCAGTGGTTCCGGAAA+GGG 0.478553 8.2:+23406874 MS.gene011629:CDS
ACCAGCCAAAGTGAAGTTGC+CGG 0.483225 8.2:+23408715 MS.gene011629:CDS
GGGACTGCAAACAGCCTAGC+AGG 0.484901 8.2:-23408757 None:intergenic
GACATGAATGCAGGCCTTGG+AGG 0.485877 8.2:+23408919 MS.gene011629:CDS
TGATCGGCACCACTAGATAT+CGG 0.486791 8.2:+23408887 MS.gene011629:CDS
AGCACAAGTTCAGTTTGCAT+TGG 0.488386 8.2:+23407916 MS.gene011629:CDS
CTGGGAAAAGAAGTATGAAA+AGG 0.490567 8.2:+23408395 MS.gene011629:CDS
TCATTGGTATTTATCATGAC+TGG 0.490759 8.2:+23409037 MS.gene011629:CDS
AAACTTCTTCAATTCTCCTC+CGG 0.491193 8.2:-23408734 None:intergenic
TATACGCATCGGCTCCTTGA+GGG 0.491733 8.2:-23407329 None:intergenic
GGGAACATGGTTCCTCCACC+TGG 0.492570 8.2:-23407309 None:intergenic
TATGATCTTATTCATGCCAA+TGG 0.492874 8.2:+23409245 MS.gene011629:CDS
ATTGTAAAAGAGTATTGGGT+TGG 0.493911 8.2:+23409915 MS.gene011629:CDS
TTATCTAAATCACATAAATT+GGG 0.494725 8.2:-23408474 None:intergenic
TGAATAAGATCATATGTCCT+TGG 0.500320 8.2:-23409236 None:intergenic
ACAGCATTGGACACTGGTTG+CGG 0.504094 8.2:+23407399 MS.gene011629:CDS
AAAAGAATTAATAGATTGAT+CGG 0.507870 8.2:+23408871 MS.gene011629:CDS
TGCCTCATTCCTGCTCCCGA+AGG 0.510952 8.2:+23407156 MS.gene011629:CDS
AGGAAGAAACTTACTTGTCC+TGG 0.512195 8.2:-23409283 None:intergenic
AGCTATGTCATTTGCTCCGA+AGG 0.512623 8.2:+23407883 MS.gene011629:CDS
AATTGTTAGGGGAATGAGAT+GGG 0.515509 8.2:+23409836 MS.gene011629:CDS
AACAGTTGATTCTTATCAAG+AGG 0.515523 8.2:+23408813 MS.gene011629:CDS
GCTCGGTCTTGCTCTTGGCA+AGG 0.517894 8.2:-23407063 None:intergenic
GTGTTCAAATTTCCAGGTGG+AGG 0.519025 8.2:+23407297 MS.gene011629:CDS
TAAGAATCAACTGTTACGCC+TGG 0.523031 8.2:-23408805 None:intergenic
CAAGCATCTGACAGTGGAGA+AGG 0.525351 8.2:+23407242 MS.gene011629:CDS
TCAAAGGCTCGTGATGGGAA+TGG 0.531393 8.2:-23407986 None:intergenic
GTACAAACTAAATAAACCAT+TGG 0.532852 8.2:-23409261 None:intergenic
TCTTATTTACCTTCAATGCA+AGG 0.533350 8.2:-23406903 None:intergenic
ATTATGCAGGTTGCGAGTTG+GGG 0.534569 8.2:+23407833 MS.gene011629:intron
ATTGAAGGTAAATAAGATGC+AGG 0.535476 8.2:+23406909 MS.gene011629:CDS
CACTAGATATCGGAATGTAA+TGG 0.536983 8.2:+23408897 MS.gene011629:CDS
GCTGGTTACCTCGGGGATAG+GGG 0.539426 8.2:-23408698 None:intergenic
TTCTCGTTGTCTAATACCAT+GGG 0.539833 8.2:+23408021 MS.gene011629:CDS
GACATATCAAAGGCTCGTGA+TGG 0.541258 8.2:-23407992 None:intergenic
ATCTAAAATGGTGGATCATG+AGG 0.541586 8.2:+23409860 MS.gene011629:CDS
ATTTCTACATATTTGTGTTG+GGG 0.545040 8.2:-23406973 None:intergenic
TGGTTTATTTAGTTTGTACC+AGG 0.546436 8.2:+23409265 MS.gene011629:CDS
ATATCTTCTCGGGTGCAAAT+GGG 0.548383 8.2:-23409887 None:intergenic
GCCTCATTCCTGCTCCCGAA+GGG 0.551559 8.2:+23407157 MS.gene011629:CDS
ACCCTTCGGGAGCAGGAATG+AGG 0.552400 8.2:-23407158 None:intergenic
CATATTAAGGCCAGAAGGAT+CGG 0.556558 8.2:+23409770 MS.gene011629:CDS
TTCAGTTTGCATTGGAACGA+GGG 0.556579 8.2:+23407924 MS.gene011629:CDS
AAAACATGATCTATAGGGAA+AGG 0.562202 8.2:+23407103 MS.gene011629:CDS
AATTGAAGAAGTTTCCTGCT+AGG 0.562951 8.2:+23408743 MS.gene011629:CDS
TGATTATGCAGGTTGCGAGT+TGG 0.564155 8.2:+23407831 MS.gene011629:intron
TCGGTTATTCCAATCAAAGA+TGG 0.565140 8.2:+23407366 MS.gene011629:CDS
GCAAAGCAGTGGTTCCGGAA+AGG 0.568170 8.2:+23406873 MS.gene011629:CDS
CCTTACCGGGCAACAGAGCA+CGG 0.569031 8.2:+23406788 MS.gene011629:CDS
GCGAACGAAGGAGGATCTGA+AGG 0.569849 8.2:+23408332 MS.gene011629:CDS
CGTCTTTAGCTATTCTAGGA+GGG 0.573557 8.2:-23408777 None:intergenic
CCAAGAACACCAATAATAGC+AGG 0.574717 8.2:-23407950 None:intergenic
AATGTAATGGACATGAATGC+AGG 0.577859 8.2:+23408910 MS.gene011629:CDS
ATCCTTCTGGCCTTAATATG+CGG 0.578717 8.2:-23409767 None:intergenic
TGGGAAAAGAAGTATGAAAA+GGG 0.579153 8.2:+23408396 MS.gene011629:CDS
ATCGGCTCCTTGAGGGAACA+TGG 0.579987 8.2:-23407322 None:intergenic
AAGGCATTGTCCACCTCAAG+AGG 0.580231 8.2:+23407122 MS.gene011629:CDS
ACGTCTTTAGCTATTCTAGG+AGG 0.584489 8.2:-23408778 None:intergenic
ACATATCAAAGGCTCGTGAT+GGG 0.586233 8.2:-23407991 None:intergenic
TCTAGCCGAAAGTCTTTGCT+GGG 0.586847 8.2:+23408377 MS.gene011629:CDS
CATTACATTCCGATATCTAG+TGG 0.587708 8.2:-23408896 None:intergenic
GTTCAGTTTGCATTGGAACG+AGG 0.591548 8.2:+23407923 MS.gene011629:CDS
TGGTACTGTCAGAACAGCAT+TGG 0.594187 8.2:+23407386 MS.gene011629:CDS
CTCGTGATGGGAATGGAAGA+CGG 0.594874 8.2:-23407979 None:intergenic
CGAAGTTGATGTGATTAACA+AGG 0.596587 8.2:+23409806 MS.gene011629:CDS
TTGGGAACATGGCAAAGCAG+TGG 0.599535 8.2:+23406862 MS.gene011629:CDS
GTGCAGCTGCAAATCCTCCA+AGG 0.600414 8.2:-23408933 None:intergenic
GGAAAACGTACTACCAAACA+TGG 0.600730 8.2:+23408307 MS.gene011629:CDS
AAAACTGGGTGAAATTTGAA+GGG 0.602703 8.2:+23407271 MS.gene011629:CDS
AGCATTGGACACTGGTTGCG+GGG 0.605572 8.2:+23407401 MS.gene011629:CDS
AAAGTGTTGTCAGCAATTGT+GGG 0.608729 8.2:-23408991 None:intergenic
AAATTGTTAGGGGAATGAGA+TGG 0.612828 8.2:+23409835 MS.gene011629:CDS
GAGATGGGAATCTAAAATGG+TGG 0.616902 8.2:+23409851 MS.gene011629:CDS
GTCAGAACAGCATTGGACAC+TGG 0.619837 8.2:+23407393 MS.gene011629:CDS
AAGCTCATCAATATACGCAT+CGG 0.620380 8.2:-23407340 None:intergenic
AACATGGAAGCGAACGAAGG+AGG 0.623111 8.2:+23408323 MS.gene011629:CDS
AAAATGGTGGATCATGAGGA+TGG 0.624067 8.2:+23409864 MS.gene011629:CDS
GGAGGAACCATGTTCCCTCA+AGG 0.625347 8.2:+23407315 MS.gene011629:CDS
CACTTTGGCTGGTTACCTCG+GGG 0.630898 8.2:-23408705 None:intergenic
GTATATTGATGAGCTTGCAT+CGG 0.639331 8.2:+23407347 MS.gene011629:CDS
ATATACGCATCGGCTCCTTG+AGG 0.645967 8.2:-23407330 None:intergenic
GACCGCATATTAAGGCCAGA+AGG 0.646017 8.2:+23409765 MS.gene011629:CDS
GGAGAAGGCTAATCAAAACT+GGG 0.651414 8.2:+23407257 MS.gene011629:CDS
CCAAACATGGAAGCGAACGA+AGG 0.652207 8.2:+23408320 MS.gene011629:CDS
TAGCATAGTAGGCATAATCA+CGG 0.653977 8.2:-23407209 None:intergenic
GATAAAATCCAAAATCCACC+AGG 0.658663 8.2:-23408267 None:intergenic
TCAGTTTGCATTGGAACGAG+GGG 0.665623 8.2:+23407925 MS.gene011629:CDS
AGCACAGCGAAAATTGACAA+AGG 0.667719 8.2:-23406814 None:intergenic
AAGGTTCAGAAAATTGTTAG+GGG 0.677847 8.2:+23409825 MS.gene011629:CDS
TCCTTACAAGCATCTGACAG+TGG 0.686028 8.2:+23407236 MS.gene011629:CDS
AGCCAAAGTGAAGTTGCCGG+AGG 0.689567 8.2:+23408718 MS.gene011629:CDS
AGAACACTGAGACATATCAA+AGG 0.695313 8.2:-23408002 None:intergenic
AGGGCGATATCGCTATCTGG+AGG 0.701556 8.2:+23408415 MS.gene011629:CDS
TAATCACATCAACTTCGTCG+CGG 0.731217 8.2:-23409800 None:intergenic
AATGTGTTCAAATTTCCAGG+TGG 0.732268 8.2:+23407294 MS.gene011629:CDS
CTGCAAAACCCCTATCCCCG+AGG 0.738570 8.2:+23408690 MS.gene011629:CDS
TACCGGGCAACAGAGCACGG+AGG 0.774215 8.2:+23406791 MS.gene011629:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATTAAACTGATATTTA+TGG + chr8.2:23409141-23409160 MS.gene011629:intron 10.0%
!! AAAAGAATTAATAGATTGAT+CGG + chr8.2:23408871-23408890 MS.gene011629:CDS 15.0%
!! AAATAACATACTATATCAAA+AGG - chr8.2:23407448-23407467 None:intergenic 15.0%
!! AATTATGTGTAATGTATAAT+GGG + chr8.2:23407635-23407654 MS.gene011629:intron 15.0%
!! ATGATTATATTTAGAAGTTA+AGG - chr8.2:23408136-23408155 None:intergenic 15.0%
!! ATTATCTAAATCACATAAAT+TGG - chr8.2:23408478-23408497 None:intergenic 15.0%
!! TAATTATGTGTAATGTATAA+TGG + chr8.2:23407634-23407653 MS.gene011629:intron 15.0%
!! TTATCTAAATCACATAAATT+GGG - chr8.2:23408477-23408496 None:intergenic 15.0%
!!! AATTAATCATTTTAGAGTAT+AGG - chr8.2:23409128-23409147 None:intergenic 15.0%
!!! TATTTATGGATATTTTGTTA+TGG + chr8.2:23409155-23409174 MS.gene011629:intron 15.0%
!! AAATTTGACATCAAATTTGA+TGG + chr8.2:23407496-23407515 MS.gene011629:intron 20.0%
!! AATTTCTACATATTTGTGTT+GGG - chr8.2:23406977-23406996 None:intergenic 20.0%
!! ATTATGTGTAATGTATAATG+GGG + chr8.2:23407636-23407655 MS.gene011629:intron 20.0%
!! GATGATTAATGAATATAACA+AGG + chr8.2:23407554-23407573 MS.gene011629:intron 20.0%
!! TTAAACACATTTGAAAATTG+TGG - chr8.2:23407617-23407636 None:intergenic 20.0%
!! TTGATACCATCTTAAAATTT+AGG - chr8.2:23409547-23409566 None:intergenic 20.0%
!!! TGTTGTTTGTTTTATCTTTT+GGG + chr8.2:23406844-23406863 MS.gene011629:CDS 20.0%
!!! TTTTTTTTTCCTAGTAGATT+AGG - chr8.2:23409645-23409664 None:intergenic 20.0%
! AAGTCTATTCAAGATTTCAT+TGG + chr8.2:23409566-23409585 MS.gene011629:intron 25.0%
! ACACTGAAAATTGAGAAATT+TGG - chr8.2:23407678-23407697 None:intergenic 25.0%
! ACTTGAATCACAAAAATCTT+GGG + chr8.2:23408954-23408973 MS.gene011629:CDS 25.0%
! ATTTCTACATATTTGTGTTG+GGG - chr8.2:23406976-23406995 None:intergenic 25.0%
! CAATTTCTACATATTTGTGT+TGG - chr8.2:23406978-23406997 None:intergenic 25.0%
! CCTGAAAATATGTTTATAAG+TGG + chr8.2:23409468-23409487 MS.gene011629:intron 25.0%
! GTAAGCATTAAAACAAAGAA+AGG - chr8.2:23407731-23407750 None:intergenic 25.0%
! GTACAAACTAAATAAACCAT+TGG - chr8.2:23409264-23409283 None:intergenic 25.0%
! TAATGGTAGGTACAAAAAAA+TGG + chr8.2:23408663-23408682 MS.gene011629:intron 25.0%
! TACAATAACCAATATCTTCT+CGG - chr8.2:23409901-23409920 None:intergenic 25.0%
! TAGAGAAAACATGATCTATA+GGG + chr8.2:23407098-23407117 MS.gene011629:CDS 25.0%
! TGTATTTAGTATACTGAAGT+CGG + chr8.2:23407695-23407714 MS.gene011629:intron 25.0%
! TTCATATAATTCCACGATTT+CGG + chr8.2:23408594-23408613 MS.gene011629:intron 25.0%
!! CCACTTATAAACATATTTTC+AGG - chr8.2:23409471-23409490 None:intergenic 25.0%
!! GATCTAGAATACAGTATTAT+CGG + chr8.2:23408084-23408103 MS.gene011629:intron 25.0%
!! TAGTACGTTTTCCAATTAAT+TGG - chr8.2:23408300-23408319 None:intergenic 25.0%
!! TATAGATCATGTTTTCTCTA+GGG - chr8.2:23407098-23407117 None:intergenic 25.0%
!! TGGTTATTGTAAAAGAGTAT+TGG + chr8.2:23409910-23409929 MS.gene011629:CDS 25.0%
!!! GGTTATTGTAAAAGAGTATT+GGG + chr8.2:23409911-23409930 MS.gene011629:CDS 25.0%
!!! GTGTTGTTTGTTTTATCTTT+TGG + chr8.2:23406843-23406862 MS.gene011629:CDS 25.0%
!!! TTCTTTGTTTTAATGCTTAC+TGG + chr8.2:23407731-23407750 MS.gene011629:intron 25.0%
!!! TTTACTGATTTTTCCAATTC+TGG + chr8.2:23409398-23409417 MS.gene011629:intron 25.0%
AAAACATGATCTATAGGGAA+AGG + chr8.2:23407103-23407122 MS.gene011629:CDS 30.0%
AAAACTGGGTGAAATTTGAA+GGG + chr8.2:23407271-23407290 MS.gene011629:CDS 30.0%
AAGGTTCAGAAAATTGTTAG+GGG + chr8.2:23409825-23409844 MS.gene011629:CDS 30.0%
AATGAGATGGGAATCTAAAA+TGG + chr8.2:23409848-23409867 MS.gene011629:CDS 30.0%
ACAAGGTTCAGAAAATTGTT+AGG + chr8.2:23409823-23409842 MS.gene011629:CDS 30.0%
ACAATAACCAATATCTTCTC+GGG - chr8.2:23409900-23409919 None:intergenic 30.0%
ACAATCAAGAAGCAATTGAA+AGG - chr8.2:23407791-23407810 None:intergenic 30.0%
AGGTCTAATCTTATCAAATG+TGG - chr8.2:23409451-23409470 None:intergenic 30.0%
AGTCTCAATTATACCAGAAT+TGG - chr8.2:23409414-23409433 None:intergenic 30.0%
ATAACGTCTTTAGCTATTCT+AGG - chr8.2:23408784-23408803 None:intergenic 30.0%
ATCAAGAGGACAACAAATTA+TGG + chr8.2:23408827-23408846 MS.gene011629:CDS 30.0%
ATTATCACTATGATCACTTG+TGG - chr8.2:23409316-23409335 None:intergenic 30.0%
ATTGAAGGTAAATAAGATGC+AGG + chr8.2:23406909-23406928 MS.gene011629:CDS 30.0%
CAAGGTTCAGAAAATTGTTA+GGG + chr8.2:23409824-23409843 MS.gene011629:CDS 30.0%
CAAGTGATCATAGTGATAAT+TGG + chr8.2:23409316-23409335 MS.gene011629:intron 30.0%
CACTTGAATCACAAAAATCT+TGG + chr8.2:23408953-23408972 MS.gene011629:CDS 30.0%
CTAGAGAAAACATGATCTAT+AGG + chr8.2:23407097-23407116 MS.gene011629:CDS 30.0%
GAAATGTGTAGAAATGATCA+GGG - chr8.2:23408520-23408539 None:intergenic 30.0%
GGTCTAATCTTATCAAATGT+GGG - chr8.2:23409450-23409469 None:intergenic 30.0%
GTCTAATCTTATCAAATGTG+GGG - chr8.2:23409449-23409468 None:intergenic 30.0%
TATGATCTTATTCATGCCAA+TGG + chr8.2:23409245-23409264 MS.gene011629:CDS 30.0%
TCATTGGTATTTATCATGAC+TGG + chr8.2:23409037-23409056 MS.gene011629:CDS 30.0%
TCTTACAAAATCAGCTTGTA+AGG - chr8.2:23409507-23409526 None:intergenic 30.0%
TGAAATGTGTAGAAATGATC+AGG - chr8.2:23408521-23408540 None:intergenic 30.0%
TGAATAAGATCATATGTCCT+TGG - chr8.2:23409239-23409258 None:intergenic 30.0%
TGGGGTTCAAAATTCAAATT+CGG - chr8.2:23406958-23406977 None:intergenic 30.0%
! AACAGTTGATTCTTATCAAG+AGG + chr8.2:23408813-23408832 MS.gene011629:CDS 30.0%
! ACGTTTTCCAATTAATTGGA+GGG - chr8.2:23408296-23408315 None:intergenic 30.0%
! CTATAGATCATGTTTTCTCT+AGG - chr8.2:23407099-23407118 None:intergenic 30.0%
! GTACCTACCATTACAAATTT+TGG - chr8.2:23408656-23408675 None:intergenic 30.0%
! TACGTTTTCCAATTAATTGG+AGG - chr8.2:23408297-23408316 None:intergenic 30.0%
! TAGATAATGCTGATGATGTT+TGG + chr8.2:23408490-23408509 MS.gene011629:CDS 30.0%
! TCTTATTTACCTTCAATGCA+AGG - chr8.2:23406906-23406925 None:intergenic 30.0%
! TGGGAAAAGAAGTATGAAAA+GGG + chr8.2:23408396-23408415 MS.gene011629:CDS 30.0%
! TTAGGTGTTATCTATGAAAG+AGG + chr8.2:23409012-23409031 MS.gene011629:CDS 30.0%
!! ATTGTAAAAGAGTATTGGGT+TGG + chr8.2:23409915-23409934 MS.gene011629:CDS 30.0%
!! GTATTGTTGATTTGATTGAC+AGG + chr8.2:23409712-23409731 MS.gene011629:intron 30.0%
!! TATAATGGGGTTTTGTCTAT+TGG + chr8.2:23407649-23407668 MS.gene011629:intron 30.0%
!! TGGTTTATTTAGTTTGTACC+AGG + chr8.2:23409265-23409284 MS.gene011629:CDS 30.0%
!! TGTTTTATCTTTTGGGAACA+TGG + chr8.2:23406851-23406870 MS.gene011629:CDS 30.0%
AAACTTCTTCAATTCTCCTC+CGG - chr8.2:23408737-23408756 None:intergenic 35.0%
AAATTGTTAGGGGAATGAGA+TGG + chr8.2:23409835-23409854 MS.gene011629:CDS 35.0%
AAGCTCATCAATATACGCAT+CGG - chr8.2:23407343-23407362 None:intergenic 35.0%
AATGTGTTCAAATTTCCAGG+TGG + chr8.2:23407294-23407313 MS.gene011629:CDS 35.0%
AATTGAAGAAGTTTCCTGCT+AGG + chr8.2:23408743-23408762 MS.gene011629:CDS 35.0%
AATTGTTAGGGGAATGAGAT+GGG + chr8.2:23409836-23409855 MS.gene011629:CDS 35.0%
ACAATTGCTGACAACACTTT+AGG + chr8.2:23408994-23409013 MS.gene011629:CDS 35.0%
ACCCAATAATTGAATGCAGA+GGG + chr8.2:23408210-23408229 MS.gene011629:intron 35.0%
ACCGAAAGCTAAAATGTTCA+AGG + chr8.2:23407011-23407030 MS.gene011629:CDS 35.0%
AGAACACTGAGACATATCAA+AGG - chr8.2:23408005-23408024 None:intergenic 35.0%
ATAAGCGTGAATGATTATGC+AGG + chr8.2:23407820-23407839 MS.gene011629:intron 35.0%
ATACTGAAAGGAAGTAAACC+GGG - chr8.2:23407765-23407784 None:intergenic 35.0%
ATAGCTAAAGACGTTATTCC+AGG + chr8.2:23408787-23408806 MS.gene011629:CDS 35.0%
ATCTATGAAAGAGGTCTCAT+TGG + chr8.2:23409021-23409040 MS.gene011629:CDS 35.0%
ATGGTTACTATTCAGATGTG+TGG + chr8.2:23407515-23407534 MS.gene011629:intron 35.0%
CAAAACTGGGTGAAATTTGA+AGG + chr8.2:23407270-23407289 MS.gene011629:CDS 35.0%
CACTAGATATCGGAATGTAA+TGG + chr8.2:23408897-23408916 MS.gene011629:CDS 35.0%
CATACTGAAAGGAAGTAAAC+CGG - chr8.2:23407766-23407785 None:intergenic 35.0%
CATTACATTCCGATATCTAG+TGG - chr8.2:23408899-23408918 None:intergenic 35.0%
CCATGCTCCAAAATTTGTAA+TGG + chr8.2:23408646-23408665 MS.gene011629:intron 35.0%
GATAAAATCCAAAATCCACC+AGG - chr8.2:23408270-23408289 None:intergenic 35.0%
GCTCCAAAATTTGTAATGGT+AGG + chr8.2:23408650-23408669 MS.gene011629:intron 35.0%
GTAAGGAACATTAGCATAGT+AGG - chr8.2:23407223-23407242 None:intergenic 35.0%
GTATATTGATGAGCTTGCAT+CGG + chr8.2:23407347-23407366 MS.gene011629:CDS 35.0%
TAGCATAGTAGGCATAATCA+CGG - chr8.2:23407212-23407231 None:intergenic 35.0%
TCGGTTATTCCAATCAAAGA+TGG + chr8.2:23407366-23407385 MS.gene011629:CDS 35.0%
TGGTAGGTACAAAAAAATGG+AGG + chr8.2:23408666-23408685 MS.gene011629:intron 35.0%
TTCTCGTTGTCTAATACCAT+GGG + chr8.2:23408021-23408040 MS.gene011629:CDS 35.0%
! AAGGCTTTTCTACATATCCA+AGG + chr8.2:23409219-23409238 MS.gene011629:CDS 35.0%
! ATTGAAAGGTGCATACTGAA+AGG - chr8.2:23407777-23407796 None:intergenic 35.0%
! CTGGGAAAAGAAGTATGAAA+AGG + chr8.2:23408395-23408414 MS.gene011629:CDS 35.0%
! GACATTCGTTTTCTTTCTTC+AGG + chr8.2:23409192-23409211 MS.gene011629:intron 35.0%
! TCTCTAAAAGGATGTCTTCT+AGG - chr8.2:23409743-23409762 None:intergenic 35.0%
! TTTTCCTAGTAGATTAGGAC+TGG - chr8.2:23409640-23409659 None:intergenic 35.0%
! TTTTCTTTCTTCAGGTGTGA+AGG + chr8.2:23409200-23409219 MS.gene011629:intron 35.0%
!! AAAGTGTTGTCAGCAATTGT+GGG - chr8.2:23408994-23409013 None:intergenic 35.0%
!! AATGTAATGGACATGAATGC+AGG + chr8.2:23408910-23408929 MS.gene011629:CDS 35.0%
!! AGAAGACATCCTTTTAGAGA+TGG + chr8.2:23409743-23409762 MS.gene011629:CDS 35.0%
!! ATCTAAAATGGTGGATCATG+AGG + chr8.2:23409860-23409879 MS.gene011629:CDS 35.0%
!! CGAAGTTGATGTGATTAACA+AGG + chr8.2:23409806-23409825 MS.gene011629:CDS 35.0%
!! GCTCGACCTAAATTTTAAGA+TGG + chr8.2:23409538-23409557 MS.gene011629:intron 35.0%
!! GGTGGATTTTGGATTTTATC+TGG + chr8.2:23408270-23408289 MS.gene011629:CDS 35.0%
!! TAAAGTGTTGTCAGCAATTG+TGG - chr8.2:23408995-23409014 None:intergenic 35.0%
!! TGGAAGTTGATCGAGTTTTA+AGG + chr8.2:23408244-23408263 MS.gene011629:CDS 35.0%
!!! CCATTACAAATTTTGGAGCA+TGG - chr8.2:23408649-23408668 None:intergenic 35.0%
!!! GAACATTTTAGCTTTCGGTT+CGG - chr8.2:23407010-23407029 None:intergenic 35.0%
!!! GCCTTGAACATTTTAGCTTT+CGG - chr8.2:23407015-23407034 None:intergenic 35.0%
AATATCTTCTCGGGTGCAAA+TGG - chr8.2:23409891-23409910 None:intergenic 40.0%
ACATATCAAAGGCTCGTGAT+GGG - chr8.2:23407994-23408013 None:intergenic 40.0%
ACGTCTTTAGCTATTCTAGG+AGG - chr8.2:23408781-23408800 None:intergenic 40.0%
AGCACAAGTTCAGTTTGCAT+TGG + chr8.2:23407916-23407935 MS.gene011629:CDS 40.0%
AGCACAGCGAAAATTGACAA+AGG - chr8.2:23406817-23406836 None:intergenic 40.0%
AGGAAGAAACTTACTTGTCC+TGG - chr8.2:23409286-23409305 None:intergenic 40.0%
ATATCTTCTCGGGTGCAAAT+GGG - chr8.2:23409890-23409909 None:intergenic 40.0%
ATATGCGGTCCATCTCTAAA+AGG - chr8.2:23409755-23409774 None:intergenic 40.0%
ATTTGCACCCGAGAAGATAT+TGG + chr8.2:23409890-23409909 MS.gene011629:CDS 40.0%
CAAAATCAGCTTGTAAGGTG+AGG - chr8.2:23409502-23409521 None:intergenic 40.0%
CAAACTGAACTTGTGCTTCA+TGG - chr8.2:23407913-23407932 None:intergenic 40.0%
CAACTCATTAACCATCCACT+GGG + chr8.2:23407582-23407601 MS.gene011629:intron 40.0%
CACCCAATAATTGAATGCAG+AGG + chr8.2:23408209-23408228 MS.gene011629:intron 40.0%
CATATTAAGGCCAGAAGGAT+CGG + chr8.2:23409770-23409789 MS.gene011629:CDS 40.0%
CCAAGAACACCAATAATAGC+AGG - chr8.2:23407953-23407972 None:intergenic 40.0%
CGCATTATAATCCGAAATCG+TGG - chr8.2:23408608-23408627 None:intergenic 40.0%
CTGACAGTACCATCTTTGAT+TGG - chr8.2:23407378-23407397 None:intergenic 40.0%
GCCCTCTGCATTCAATTATT+GGG - chr8.2:23408214-23408233 None:intergenic 40.0%
GGAAAACGTACTACCAAACA+TGG + chr8.2:23408307-23408326 MS.gene011629:CDS 40.0%
GGAGAAGGCTAATCAAAACT+GGG + chr8.2:23407257-23407276 MS.gene011629:CDS 40.0%
GGGAATGTGTTCAAATTTCC+AGG + chr8.2:23407291-23407310 MS.gene011629:CDS 40.0%
GTTCTCGTTGTCTAATACCA+TGG + chr8.2:23408020-23408039 MS.gene011629:CDS 40.0%
TAAGAATCAACTGTTACGCC+TGG - chr8.2:23408808-23408827 None:intergenic 40.0%
TAATCACATCAACTTCGTCG+CGG - chr8.2:23409803-23409822 None:intergenic 40.0%
TAGAGATGGACCGCATATTA+AGG + chr8.2:23409757-23409776 MS.gene011629:CDS 40.0%
TATCTGGCCCTCCAATTAAT+TGG + chr8.2:23408286-23408305 MS.gene011629:CDS 40.0%
TCACTATGATCACTTGTGGA+TGG - chr8.2:23409312-23409331 None:intergenic 40.0%
TGATCACTTGTGGATGGAAA+AGG - chr8.2:23409306-23409325 None:intergenic 40.0%
TGCCCTCTGCATTCAATTAT+TGG - chr8.2:23408215-23408234 None:intergenic 40.0%
TGGAGAAGGCTAATCAAAAC+TGG + chr8.2:23407256-23407275 MS.gene011629:CDS 40.0%
TGTGCTTCATGGTTATCCTT+CGG - chr8.2:23407902-23407921 None:intergenic 40.0%
TTCAGTTTGCATTGGAACGA+GGG + chr8.2:23407924-23407943 MS.gene011629:CDS 40.0%
! CAACGCAATTTTTCCTCTTG+AGG - chr8.2:23407138-23407157 None:intergenic 40.0%
! CCTGCTATTATTGGTGTTCT+TGG + chr8.2:23407950-23407969 MS.gene011629:CDS 40.0%
! CGTCTTTAGCTATTCTAGGA+GGG - chr8.2:23408780-23408799 None:intergenic 40.0%
! CTAATACCATGGGCTGAAAA+TGG + chr8.2:23408031-23408050 MS.gene011629:CDS 40.0%
! CTTTTCCCAGCAAAGACTTT+CGG - chr8.2:23408385-23408404 None:intergenic 40.0%
! GAGATGGGAATCTAAAATGG+TGG + chr8.2:23409851-23409870 MS.gene011629:CDS 40.0%
! TAGGCATAATCACGGCTTTT+AGG - chr8.2:23407204-23407223 None:intergenic 40.0%
!! AAAATGGTGGATCATGAGGA+TGG + chr8.2:23409864-23409883 MS.gene011629:CDS 40.0%
!! ATCCTTCTGGCCTTAATATG+CGG - chr8.2:23409770-23409789 None:intergenic 40.0%
!! GGGTTCTAAAAATGCCTTAC+CGG + chr8.2:23406774-23406793 MS.gene011629:CDS 40.0%
!! GGTTCTAAAAATGCCTTACC+GGG + chr8.2:23406775-23406794 MS.gene011629:CDS 40.0%
!! TATAGGAAGCTGACTTGCAA+GGG - chr8.2:23409111-23409130 None:intergenic 40.0%
!!! TTTTAAGGCCTGGTGGATTT+TGG + chr8.2:23408259-23408278 MS.gene011629:CDS 40.0%
AAAAGGAGTCGTGTACCCTT+CGG - chr8.2:23407175-23407194 None:intergenic 45.0%
AAAAGGGCGATATCGCTATC+TGG + chr8.2:23408412-23408431 MS.gene011629:CDS 45.0%
ACCATTAGGTCTCCTGCTAT+CGG + chr8.2:23409596-23409615 MS.gene011629:intron 45.0%
ATAGCAGGAGACCTAATGGT+GGG - chr8.2:23409596-23409615 None:intergenic 45.0%
ATCTAGCCGAAAGTCTTTGC+TGG + chr8.2:23408376-23408395 MS.gene011629:CDS 45.0%
ATTATGCAGGTTGCGAGTTG+GGG + chr8.2:23407833-23407852 MS.gene011629:intron 45.0%
GACATATCAAAGGCTCGTGA+TGG - chr8.2:23407995-23408014 None:intergenic 45.0%
GATTATGCAGGTTGCGAGTT+GGG + chr8.2:23407832-23407851 MS.gene011629:intron 45.0%
GCAACTCATTAACCATCCAC+TGG + chr8.2:23407581-23407600 MS.gene011629:intron 45.0%
GCTTCCAGTCCTAATCTACT+AGG + chr8.2:23409633-23409652 MS.gene011629:intron 45.0%
GGCAGAGCAGAAAAAAATCG+AGG + chr8.2:23408353-23408372 MS.gene011629:CDS 45.0%
GTGTTCAAATTTCCAGGTGG+AGG + chr8.2:23407297-23407316 MS.gene011629:CDS 45.0%
GTTCAGTTTGCATTGGAACG+AGG + chr8.2:23407923-23407942 MS.gene011629:CDS 45.0%
TCAGTTTGCATTGGAACGAG+GGG + chr8.2:23407925-23407944 MS.gene011629:CDS 45.0%
TCATTGGATCACCCACCATT+AGG + chr8.2:23409582-23409601 MS.gene011629:intron 45.0%
TCCACTGTCAGATGCTTGTA+AGG - chr8.2:23407240-23407259 None:intergenic 45.0%
TCCTTACAAGCATCTGACAG+TGG + chr8.2:23407236-23407255 MS.gene011629:CDS 45.0%
TCTAGCCGAAAGTCTTTGCT+GGG + chr8.2:23408377-23408396 MS.gene011629:CDS 45.0%
TGATCGGCACCACTAGATAT+CGG + chr8.2:23408887-23408906 MS.gene011629:CDS 45.0%
TGATTATGCAGGTTGCGAGT+TGG + chr8.2:23407831-23407850 MS.gene011629:intron 45.0%
TGGTACTGTCAGAACAGCAT+TGG + chr8.2:23407386-23407405 MS.gene011629:CDS 45.0%
TTGTGGTTAATTGTGCCCAG+TGG - chr8.2:23407600-23407619 None:intergenic 45.0%
TTTAATGCTTACTGGCCCAC+TGG + chr8.2:23407739-23407758 MS.gene011629:intron 45.0%
! AGCTATGTCATTTGCTCCGA+AGG + chr8.2:23407883-23407902 MS.gene011629:CDS 45.0%
! CACTAACCATTTTCAGCCCA+TGG - chr8.2:23408040-23408059 None:intergenic 45.0%
! CGCAATTTTTCCTCTTGAGG+TGG - chr8.2:23407135-23407154 None:intergenic 45.0%
! CTCTAGGGAATGTCATTGCT+CGG - chr8.2:23407083-23407102 None:intergenic 45.0%
! TAATCACGGCTTTTAGGCCA+TGG - chr8.2:23407198-23407217 None:intergenic 45.0%
! TGCAGAGGGCATGTATCTAA+TGG + chr8.2:23408224-23408243 MS.gene011629:intron 45.0%
! TTCACTTTGGCTGGTTACCT+CGG - chr8.2:23408710-23408729 None:intergenic 45.0%
!! GTATAGGAAGCTGACTTGCA+AGG - chr8.2:23409112-23409131 None:intergenic 45.0%
!!! GTTGATCGAGTTTTAAGGCC+TGG + chr8.2:23408249-23408268 MS.gene011629:CDS 45.0%
!!! AAATAGTAATATTTTATTTT+TGG - chr8.2:23409379-23409398 None:intergenic 5.0%
AAAGGAGTCGTGTACCCTTC+GGG - chr8.2:23407174-23407193 None:intergenic 50.0%
AACATGGAAGCGAACGAAGG+AGG + chr8.2:23408323-23408342 MS.gene011629:CDS 50.0%
ACATGGCAAAGCAGTGGTTC+CGG + chr8.2:23406868-23406887 MS.gene011629:CDS 50.0%
ACCAGCCAAAGTGAAGTTGC+CGG + chr8.2:23408715-23408734 MS.gene011629:CDS 50.0%
ATGGACATGAATGCAGGCCT+TGG + chr8.2:23408916-23408935 MS.gene011629:CDS 50.0%
CAAAGCAGTGGTTCCGGAAA+GGG + chr8.2:23406874-23406893 MS.gene011629:CDS 50.0%
CAAGCATCTGACAGTGGAGA+AGG + chr8.2:23407242-23407261 MS.gene011629:CDS 50.0%
CCAAACATGGAAGCGAACGA+AGG + chr8.2:23408320-23408339 MS.gene011629:CDS 50.0%
CCTTCGTTCGCTTCCATGTT+TGG - chr8.2:23408323-23408342 None:intergenic 50.0%
CGGATTATGACCGATCCTTC+TGG - chr8.2:23409783-23409802 None:intergenic 50.0%
GACCGCATATTAAGGCCAGA+AGG + chr8.2:23409765-23409784 MS.gene011629:CDS 50.0%
GATAGCAGGAGACCTAATGG+TGG - chr8.2:23409597-23409616 None:intergenic 50.0%
GGTTAATTGTGCCCAGTGGA+TGG - chr8.2:23407596-23407615 None:intergenic 50.0%
TCATTGCTCGGTCTTGCTCT+TGG - chr8.2:23407071-23407090 None:intergenic 50.0%
TCCGATAGCAGGAGACCTAA+TGG - chr8.2:23409600-23409619 None:intergenic 50.0%
TTGGGAACATGGCAAAGCAG+TGG + chr8.2:23406862-23406881 MS.gene011629:CDS 50.0%
! ACAGCATTGGACACTGGTTG+CGG + chr8.2:23407399-23407418 MS.gene011629:CDS 50.0%
! CGGCTTTTAGGCCATGGAAA+AGG - chr8.2:23407192-23407211 None:intergenic 50.0%
! CTCGTGATGGGAATGGAAGA+CGG - chr8.2:23407982-23408001 None:intergenic 50.0%
! GGTACACGACTCCTTTTCCA+TGG + chr8.2:23407178-23407197 MS.gene011629:CDS 50.0%
! GTCAGAACAGCATTGGACAC+TGG + chr8.2:23407393-23407412 MS.gene011629:CDS 50.0%
! TCAAAGGCTCGTGATGGGAA+TGG - chr8.2:23407989-23408008 None:intergenic 50.0%
! TCACTTTGGCTGGTTACCTC+GGG - chr8.2:23408709-23408728 None:intergenic 50.0%
!! AAGGCATTGTCCACCTCAAG+AGG + chr8.2:23407122-23407141 MS.gene011629:CDS 50.0%
!! ATATACGCATCGGCTCCTTG+AGG - chr8.2:23407333-23407352 None:intergenic 50.0%
!! CGAGGGGTACCTGCTATTAT+TGG + chr8.2:23407941-23407960 MS.gene011629:CDS 50.0%
!! TATACGCATCGGCTCCTTGA+GGG - chr8.2:23407332-23407351 None:intergenic 50.0%
!!! GATCGAGTTTTAAGGCCTGG+TGG + chr8.2:23408252-23408271 MS.gene011629:CDS 50.0%
AAGGAAGTAAACCGGGCCAG+TGG - chr8.2:23407758-23407777 None:intergenic 55.0%
AGCCAAAGTGAAGTTGCCGG+AGG + chr8.2:23408718-23408737 MS.gene011629:CDS 55.0%
AGGAAGTAAACCGGGCCAGT+GGG - chr8.2:23407757-23407776 None:intergenic 55.0%
AGGGCGATATCGCTATCTGG+AGG + chr8.2:23408415-23408434 MS.gene011629:CDS 55.0%
CTCCTCCGGCAACTTCACTT+TGG - chr8.2:23408723-23408742 None:intergenic 55.0%
GACATGAATGCAGGCCTTGG+AGG + chr8.2:23408919-23408938 MS.gene011629:CDS 55.0%
GCAAAGCAGTGGTTCCGGAA+AGG + chr8.2:23406873-23406892 MS.gene011629:CDS 55.0%
GCGAACGAAGGAGGATCTGA+AGG + chr8.2:23408332-23408351 MS.gene011629:CDS 55.0%
GGAGGAACCATGTTCCCTCA+AGG + chr8.2:23407315-23407334 MS.gene011629:CDS 55.0%
GGGAGACAGCCTTGCATTGA+AGG + chr8.2:23406894-23406913 MS.gene011629:CDS 55.0%
GTGCAGCTGCAAATCCTCCA+AGG - chr8.2:23408936-23408955 None:intergenic 55.0%
TCCGGCAACTTCACTTTGGC+TGG - chr8.2:23408719-23408738 None:intergenic 55.0%
TCTCCTGCTATCGGACCAGT+TGG + chr8.2:23409605-23409624 MS.gene011629:intron 55.0%
TGCAAGGCTGTCTCCCTTTC+CGG - chr8.2:23406890-23406909 None:intergenic 55.0%
! AGCATTGGACACTGGTTGCG+GGG + chr8.2:23407401-23407420 MS.gene011629:CDS 55.0%
! ATCGGCTCCTTGAGGGAACA+TGG - chr8.2:23407325-23407344 None:intergenic 55.0%
! CACTTTGGCTGGTTACCTCG+GGG - chr8.2:23408708-23408727 None:intergenic 55.0%
! CAGCATTGGACACTGGTTGC+GGG + chr8.2:23407400-23407419 MS.gene011629:CDS 55.0%
ACCCTTCGGGAGCAGGAATG+AGG - chr8.2:23407161-23407180 None:intergenic 60.0%
CCTTACCGGGCAACAGAGCA+CGG + chr8.2:23406788-23406807 MS.gene011629:CDS 60.0%
CTGCAAAACCCCTATCCCCG+AGG + chr8.2:23408690-23408709 MS.gene011629:CDS 60.0%
GACTGGAAGCCTGAGCCAAC+TGG - chr8.2:23409623-23409642 None:intergenic 60.0%
GAGCCAACTGGTCCGATAGC+AGG - chr8.2:23409611-23409630 None:intergenic 60.0%
GCCTCATTCCTGCTCCCGAA+GGG + chr8.2:23407157-23407176 MS.gene011629:CDS 60.0%
GCTCGGTCTTGCTCTTGGCA+AGG - chr8.2:23407066-23407085 None:intergenic 60.0%
GCTGGTTACCTCGGGGATAG+GGG - chr8.2:23408701-23408720 None:intergenic 60.0%
GGGAACATGGTTCCTCCACC+TGG - chr8.2:23407312-23407331 None:intergenic 60.0%
GGGACTGCAAACAGCCTAGC+AGG - chr8.2:23408760-23408779 None:intergenic 60.0%
TGCCTCATTCCTGCTCCCGA+AGG + chr8.2:23407156-23407175 MS.gene011629:CDS 60.0%
! GCTATCGGACCAGTTGGCTC+AGG + chr8.2:23409611-23409630 MS.gene011629:intron 60.0%
! GGCTGGTTACCTCGGGGATA+GGG - chr8.2:23408702-23408721 None:intergenic 60.0%
! TGGCTGGTTACCTCGGGGAT+AGG - chr8.2:23408703-23408722 None:intergenic 60.0%
CCGTGCTCTGTTGCCCGGTA+AGG - chr8.2:23406791-23406810 None:intergenic 65.0%
GTCGTGTACCCTTCGGGAGC+AGG - chr8.2:23407168-23407187 None:intergenic 65.0%
TACCGGGCAACAGAGCACGG+AGG + chr8.2:23406791-23406810 MS.gene011629:CDS 65.0%
TGCTTACTGGCCCACTGGCC+CGG + chr8.2:23407744-23407763 MS.gene011629:intron 65.0%
GGCCTCCGTGCTCTGTTGCC+CGG - chr8.2:23406796-23406815 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 23406772 23409965 23406772 ID=MS.gene011629
chr8.2 mRNA 23406772 23409965 23406772 ID=MS.gene011629.t1;Parent=MS.gene011629
chr8.2 exon 23406772 23407422 23406772 ID=MS.gene011629.t1.exon1;Parent=MS.gene011629.t1
chr8.2 CDS 23406772 23407422 23406772 ID=cds.MS.gene011629.t1;Parent=MS.gene011629.t1
chr8.2 exon 23407842 23408052 23407842 ID=MS.gene011629.t1.exon2;Parent=MS.gene011629.t1
chr8.2 CDS 23407842 23408052 23407842 ID=cds.MS.gene011629.t1;Parent=MS.gene011629.t1
chr8.2 exon 23408229 23408511 23408229 ID=MS.gene011629.t1.exon3;Parent=MS.gene011629.t1
chr8.2 CDS 23408229 23408511 23408229 ID=cds.MS.gene011629.t1;Parent=MS.gene011629.t1
chr8.2 exon 23408672 23409058 23408672 ID=MS.gene011629.t1.exon4;Parent=MS.gene011629.t1
chr8.2 CDS 23408672 23409058 23408672 ID=cds.MS.gene011629.t1;Parent=MS.gene011629.t1
chr8.2 exon 23409214 23409291 23409214 ID=MS.gene011629.t1.exon5;Parent=MS.gene011629.t1
chr8.2 CDS 23409214 23409291 23409214 ID=cds.MS.gene011629.t1;Parent=MS.gene011629.t1
chr8.2 exon 23409734 23409965 23409734 ID=MS.gene011629.t1.exon6;Parent=MS.gene011629.t1
chr8.2 CDS 23409734 23409965 23409734 ID=cds.MS.gene011629.t1;Parent=MS.gene011629.t1
Gene Sequence

>MS.gene011629

ATGGGTTCTAAAAATGCCTTACCGGGCAACAGAGCACGGAGGCCTTTGTCAATTTTCGCTGTGCTTGCTCTGTGTTGTTTGTTTTATCTTTTGGGAACATGGCAAAGCAGTGGTTCCGGAAAGGGAGACAGCCTTGCATTGAAGGTAAATAAGATGCAGGCAACAACAGACTGCAACATTGTACCGAATTTGAATTTTGAACCCCAACACAAATATGTAGAAATTGTTGAGCAATCCGAACCGAAAGCTAAAATGTTCAAGGCATGTGATGTAAAATATACTGATTATACACCTTGCCAAGAGCAAGACCGAGCAATGACATTCCCTAGAGAAAACATGATCTATAGGGAAAGGCATTGTCCACCTCAAGAGGAAAAATTGCGTTGCCTCATTCCTGCTCCCGAAGGGTACACGACTCCTTTTCCATGGCCTAAAAGCCGTGATTATGCCTACTATGCTAATGTTCCTTACAAGCATCTGACAGTGGAGAAGGCTAATCAAAACTGGGTGAAATTTGAAGGGAATGTGTTCAAATTTCCAGGTGGAGGAACCATGTTCCCTCAAGGAGCCGATGCGTATATTGATGAGCTTGCATCGGTTATTCCAATCAAAGATGGTACTGTCAGAACAGCATTGGACACTGGTTGCGGGGTAAGCTTTCATGTCAAATAATCCTTTTGATATAGTATGTTATTTTTCTTTGTTGAGAAATATTTCGACACACAAATTTGACATCAAATTTGATGGTTACTATTCAGATGTGTGGTTAATTACGTTTAGTTGATGATTAATGAATATAACAAGGTGTAGCAACTCATTAACCATCCACTGGGCACAATTAACCACAATTTTCAAATGTGTTTAATTATGTGTAATGTATAATGGGGTTTTGTCTATTGGATTCCAAATTTCTCAATTTTCAGTGTATTTAGTATACTGAAGTCGGAATCATTTGTCCTTTCTTTGTTTTAATGCTTACTGGCCCACTGGCCCGGTTTACTTCCTTTCAGTATGCACCTTTCAATTGCTTCTTGATTGTTGTAGCAATATAAGCGTGAATGATTATGCAGGTTGCGAGTTGGGGAGCGTACTTGCTAAAGAGAAATGTGCTAGCTATGTCATTTGCTCCGAAGGATAACCATGAAGCACAAGTTCAGTTTGCATTGGAACGAGGGGTACCTGCTATTATTGGTGTTCTTGGTTCGATCCGTCTTCCATTCCCATCACGAGCCTTTGATATGTCTCAGTGTTCTCGTTGTCTAATACCATGGGCTGAAAATGGTTAGTGCTAAATTAGACAGTCAATAAGATTGATCTAGAATACAGTATTATCGGCATTTTCTTATGTCGATGATGATATTCCTTAACTTCTAAATATAATCATGCAAATGTTAATAATTCTGAAAATCTGAATGCAACATTGTTTAGTTGATTTTTCACCCAATAATTGAATGCAGAGGGCATGTATCTAATGGAAGTTGATCGAGTTTTAAGGCCTGGTGGATTTTGGATTTTATCTGGCCCTCCAATTAATTGGAAAACGTACTACCAAACATGGAAGCGAACGAAGGAGGATCTGAAGGCAGAGCAGAAAAAAATCGAGGATCTAGCCGAAAGTCTTTGCTGGGAAAAGAAGTATGAAAAGGGCGATATCGCTATCTGGAGGAAGAAAATAAATGCTAAATCATGTCAAAGAAAATCTCCCAATTTATGTGATTTAGATAATGCTGATGATGTTTGGTAAGCCCTGATCATTTCTACACATTTCATTTAACAAGTATAATGATTCATTTGTTGTTAGAGAGATTTGAATAATTATTTGTTCATATAATTCCACGATTTCGGATTATAATGCGCTCATGAATAACTTTTCTCCATGCTCCAAAATTTGTAATGGTAGGTACAAAAAAATGGAGGTCTGCAAAACCCCTATCCCCGAGGTAACCAGCCAAAGTGAAGTTGCCGGAGGAGAATTGAAGAAGTTTCCTGCTAGGCTGTTTGCAGTCCCTCCTAGAATAGCTAAAGACGTTATTCCAGGCGTAACAGTTGATTCTTATCAAGAGGACAACAAATTATGGAAAAAGCGTGTTAATAATTACAAAAGAATTAATAGATTGATCGGCACCACTAGATATCGGAATGTAATGGACATGAATGCAGGCCTTGGAGGATTTGCAGCTGCACTTGAATCACAAAAATCTTGGGTGATGAATGCTGTGCCCACAATTGCTGACAACACTTTAGGTGTTATCTATGAAAGAGGTCTCATTGGTATTTATCATGACTGGTAAGTTTCTAAAATTATCTTCATAAAGTTTTCTAATTTTATGATGATTCCCTTGCAAGTCAGCTTCCTATACTCTAAAATGATTAATTAAACTGATATTTATGGATATTTTGTTATGGTATGAAATTGCAATGACATTCGTTTTCTTTCTTCAGGTGTGAAGGCTTTTCTACATATCCAAGGACATATGATCTTATTCATGCCAATGGTTTATTTAGTTTGTACCAGGACAAGTAAGTTTCTTCCTTTTCCATCCACAAGTGATCATAGTGATAATTGGTAATTTGAAATTATAACTATATCAAGTCTTTTACTTACCAAAAATAAAATATTACTATTTTTACTGATTTTTCCAATTCTGGTATAATTGAGACTATAATTTGTTTGCCCCACATTTGATAAGATTAGACCTGAAAATATGTTTATAAGTGGTAGACAATCCTCACCTTACAAGCTGATTTTGTAAGAGTTAAGTTAAAGCTCGACCTAAATTTTAAGATGGTATCAAAGTCTATTCAAGATTTCATTGGATCACCCACCATTAGGTCTCCTGCTATCGGACCAGTTGGCTCAGGCTTCCAGTCCTAATCTACTAGGAAAAAAAAACAGAGAACTTCAACATGTGATTATAATTCTGACTTAATTTAACATAAGTATTGTTGATTTGATTGACAGGTGCAACCTAGAAGACATCCTTTTAGAGATGGACCGCATATTAAGGCCAGAAGGATCGGTCATAATCCGCGACGAAGTTGATGTGATTAACAAGGTTCAGAAAATTGTTAGGGGAATGAGATGGGAATCTAAAATGGTGGATCATGAGGATGGCCCATTTGCACCCGAGAAGATATTGGTTATTGTAAAAGAGTATTGGGTTGGCAGCAGTAAAAACAACACATCCAGTTAG
Protein sequence

>MS.gene011629.t1

MGSKNALPGNRARRPLSIFAVLALCCLFYLLGTWQSSGSGKGDSLALKVNKMQATTDCNIVPNLNFEPQHKYVEIVEQSEPKAKMFKACDVKYTDYTPCQEQDRAMTFPRENMIYRERHCPPQEEKLRCLIPAPEGYTTPFPWPKSRDYAYYANVPYKHLTVEKANQNWVKFEGNVFKFPGGGTMFPQGADAYIDELASVIPIKDGTVRTALDTGCGVASWGAYLLKRNVLAMSFAPKDNHEAQVQFALERGVPAIIGVLGSIRLPFPSRAFDMSQCSRCLIPWAENEGMYLMEVDRVLRPGGFWILSGPPINWKTYYQTWKRTKEDLKAEQKKIEDLAESLCWEKKYEKGDIAIWRKKINAKSCQRKSPNLCDLDNADDVWYKKMEVCKTPIPEVTSQSEVAGGELKKFPARLFAVPPRIAKDVIPGVTVDSYQEDNKLWKKRVNNYKRINRLIGTTRYRNVMDMNAGLGGFAAALESQKSWVMNAVPTIADNTLGVIYERGLIGIYHDWCEGFSTYPRTYDLIHANGLFSLYQDKCNLEDILLEMDRILRPEGSVIIRDEVDVINKVQKIVRGMRWESKMVDHEDGPFAPEKILVIVKEYWVGSSKNNTSS