AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene72930


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72930.t1 MTR_4g098890 98.835 601 7 0 1 601 1 601 0.0 1254
MS.gene72930.t1 MTR_8g055840 68.071 617 182 6 3 613 2 609 0.0 910
MS.gene72930.t1 MTR_5g040360 66.288 617 192 6 3 613 2 608 0.0 884
MS.gene72930.t1 MTR_3g040370 63.592 618 208 7 1 613 1 606 0.0 834
MS.gene72930.t1 MTR_8g100075 56.260 615 239 7 18 612 25 629 0.0 739
MS.gene72930.t1 MTR_7g076170 56.683 621 246 7 5 605 10 627 0.0 733
MS.gene72930.t1 MTR_0019s0120 56.209 612 249 6 17 612 27 635 0.0 730
MS.gene72930.t1 MTR_1g101370 57.167 600 249 4 13 604 19 618 0.0 728
MS.gene72930.t1 MTR_8g432680 54.173 611 252 6 18 605 27 632 0.0 696
MS.gene72930.t1 MTR_7g006060 52.841 528 238 4 82 598 39 566 0.0 595
MS.gene72930.t1 MTR_0019s0120 54.403 511 214 6 17 511 27 534 0.0 583
MS.gene72930.t1 MTR_8g071280 47.932 532 264 6 86 610 70 595 2.85e-178 518
MS.gene72930.t1 MTR_5g026930 44.243 608 309 11 10 610 13 597 3.09e-173 505
MS.gene72930.t1 MTR_7g076150 45.936 566 259 13 60 603 47 587 9.25e-167 488
MS.gene72930.t1 MTR_8g432620 44.102 551 276 9 67 604 70 601 1.20e-166 488
MS.gene72930.t1 MTR_5g080720 43.178 535 270 12 82 600 121 637 1.43e-151 451
MS.gene72930.t1 MTR_1g442840 42.173 543 280 11 84 606 90 618 4.70e-149 444
MS.gene72930.t1 MTR_1g442840 43.725 510 257 10 113 606 10 505 3.65e-147 436
MS.gene72930.t1 MTR_1g075900 41.261 555 292 11 72 606 77 617 4.67e-146 437
MS.gene72930.t1 MTR_3g068990 43.126 531 274 12 84 601 151 666 1.55e-144 434
MS.gene72930.t1 MTR_1g069785 40.255 549 294 11 84 612 60 594 8.23e-144 430
MS.gene72930.t1 MTR_1g029730 44.030 536 263 14 86 602 141 658 5.08e-143 430
MS.gene72930.t1 MTR_7g076150 47.974 469 199 12 155 603 1 444 6.16e-143 422
MS.gene72930.t1 MTR_3g096480 44.343 548 266 16 76 603 248 776 2.26e-141 430
MS.gene72930.t1 MTR_5g026930 44.204 509 255 10 10 511 13 499 8.16e-141 419
MS.gene72930.t1 MTR_8g093880 42.486 539 269 15 86 603 288 806 9.47e-135 414
MS.gene72930.t1 MTR_8g076650 44.078 515 259 13 95 594 387 887 5.59e-133 411
MS.gene72930.t1 MTR_1g051055 41.078 538 271 12 89 603 89 603 1.45e-132 401
MS.gene72930.t1 MTR_5g083150 39.811 530 282 14 94 610 100 605 4.91e-131 397
MS.gene72930.t1 MTR_5g080720 43.158 475 236 12 82 540 121 577 2.07e-130 395
MS.gene72930.t1 MTR_5g021100 41.714 525 271 14 89 594 322 830 1.90e-129 400
MS.gene72930.t1 MTR_3g088790 39.405 538 288 15 86 603 223 742 2.85e-123 382
MS.gene72930.t1 MTR_3g071530 39.400 500 274 12 91 579 149 630 5.23e-122 375
MS.gene72930.t1 MTR_1g022255 35.581 534 295 15 86 603 199 699 7.93e-96 309
MS.gene72930.t1 MTR_3g074780 32.200 559 322 17 82 603 150 688 6.22e-91 295
MS.gene72930.t1 MTR_4g083030 31.639 610 364 15 16 602 24 603 1.95e-90 292
MS.gene72930.t1 MTR_5g064080 31.794 563 321 18 76 603 136 670 3.27e-88 288
MS.gene72930.t1 MTR_1g022255 30.846 402 234 13 86 472 199 571 1.80e-46 173
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72930.t1 AT4G18030 74.794 607 149 3 1 605 1 605 0.0 970
MS.gene72930.t1 AT1G26850 68.720 617 184 5 1 610 1 615 0.0 912
MS.gene72930.t1 AT1G26850 68.720 617 184 5 1 610 1 615 0.0 912
MS.gene72930.t1 AT4G10440 56.981 616 240 6 11 609 15 622 0.0 753
MS.gene72930.t1 AT1G33170 54.874 636 253 6 3 607 6 638 0.0 729
MS.gene72930.t1 AT1G26850 67.723 505 154 5 1 498 1 503 0.0 725
MS.gene72930.t1 AT4G00750 55.025 607 261 6 18 612 25 631 0.0 716
MS.gene72930.t1 AT2G45750 54.248 612 263 8 18 613 19 629 0.0 689
MS.gene72930.t1 AT2G43200 51.731 520 240 5 86 598 91 606 0.0 563
MS.gene72930.t1 AT2G43200 51.731 520 240 5 86 598 91 606 0.0 563
MS.gene72930.t1 AT1G31850 44.928 621 309 13 2 610 4 603 0.0 538
MS.gene72930.t1 AT1G31850 44.928 621 309 13 2 610 4 603 0.0 538
MS.gene72930.t1 AT1G31850 44.928 621 309 13 2 610 4 603 0.0 538
MS.gene72930.t1 AT1G31850 44.928 621 309 13 2 610 4 603 0.0 538
MS.gene72930.t1 AT4G19120 44.545 550 290 6 73 613 57 600 7.21e-178 517
MS.gene72930.t1 AT4G19120 44.545 550 290 6 73 613 57 600 7.21e-178 517
MS.gene72930.t1 AT4G00740 44.505 546 275 9 69 603 65 593 5.14e-162 477
MS.gene72930.t1 AT4G00740 44.505 546 275 9 69 603 65 593 5.14e-162 477
MS.gene72930.t1 AT1G04430 38.622 624 342 12 9 606 8 616 2.46e-146 437
MS.gene72930.t1 AT1G04430 38.622 624 342 12 9 606 8 616 2.46e-146 437
MS.gene72930.t1 AT1G04430 38.622 624 342 12 9 606 8 616 2.46e-146 437
MS.gene72930.t1 AT5G06050 42.752 545 262 14 82 602 145 663 5.23e-146 438
MS.gene72930.t1 AT4G19120 45.759 448 229 5 73 511 57 499 7.65e-146 432
MS.gene72930.t1 AT2G39750 41.516 554 282 12 69 600 156 689 5.35e-144 434
MS.gene72930.t1 AT4G14360 42.690 513 263 10 84 579 74 572 7.05e-144 431
MS.gene72930.t1 AT4G14360 42.690 513 263 10 84 579 74 572 7.05e-144 431
MS.gene72930.t1 AT3G23300 40.433 554 297 11 72 606 65 604 1.63e-143 430
MS.gene72930.t1 AT3G23300 40.433 554 297 11 72 606 65 604 1.63e-143 430
MS.gene72930.t1 AT1G77260 43.097 536 259 15 86 600 143 653 2.67e-142 428
MS.gene72930.t1 AT1G29470 43.885 556 267 18 73 603 222 757 1.13e-139 425
MS.gene72930.t1 AT1G29470 43.885 556 267 18 73 603 222 757 1.13e-139 425
MS.gene72930.t1 AT5G14430 39.016 610 324 16 16 603 21 604 5.43e-136 410
MS.gene72930.t1 AT2G34300 42.937 538 267 15 86 603 240 757 1.72e-135 414
MS.gene72930.t1 AT2G34300 42.937 538 267 15 86 603 240 757 1.72e-135 414
MS.gene72930.t1 AT2G34300 42.937 538 267 15 86 603 240 757 1.72e-135 414
MS.gene72930.t1 AT5G04060 39.962 533 283 10 88 603 85 597 4.80e-135 407
MS.gene72930.t1 AT5G14430 38.689 610 326 16 16 603 21 604 3.50e-134 405
MS.gene72930.t1 AT3G56080 42.032 502 257 12 95 582 114 595 6.57e-134 405
MS.gene72930.t1 AT3G10200 40.706 538 287 11 81 603 68 588 1.99e-133 403
MS.gene72930.t1 AT5G64030 42.694 527 266 15 95 603 308 816 8.35e-133 409
MS.gene72930.t1 AT3G51070 42.453 530 265 14 94 603 380 889 5.60e-129 401
MS.gene72930.t1 AT2G40280 40.421 522 270 13 94 603 89 581 2.33e-127 387
MS.gene72930.t1 AT3G10200 40.234 512 273 11 81 576 68 562 1.48e-125 383
MS.gene72930.t1 AT3G56080 43.142 452 223 12 95 532 114 545 3.46e-119 365
MS.gene72930.t1 AT3G51070 43.982 457 224 12 94 532 380 822 9.75e-112 354
MS.gene72930.t1 AT1G19430 35.609 542 298 17 80 603 214 722 1.55e-94 306
MS.gene72930.t1 AT1G19430 35.609 542 298 17 80 603 214 722 1.55e-94 306
MS.gene72930.t1 AT1G13860 32.072 555 308 13 82 600 77 598 1.42e-89 290
MS.gene72930.t1 AT1G13860 32.072 555 308 13 82 600 77 598 1.42e-89 290
MS.gene72930.t1 AT1G13860 32.072 555 308 13 82 600 77 598 1.42e-89 290
MS.gene72930.t1 AT1G13860 32.072 555 308 13 82 600 77 598 1.42e-89 290
MS.gene72930.t1 AT1G78240 32.671 554 319 16 84 602 144 678 5.10e-89 290
MS.gene72930.t1 AT1G78240 32.671 554 319 16 84 602 144 678 5.10e-89 290
MS.gene72930.t1 AT2G03480 31.942 551 301 13 84 602 84 592 4.04e-86 280
MS.gene72930.t1 AT2G03480 32.545 550 310 14 84 602 84 603 1.50e-84 276
MS.gene72930.t1 AT1G13860 33.550 462 252 11 172 600 3 442 1.32e-79 259
MS.gene72930.t1 AT1G19430 31.873 411 234 15 80 473 214 595 2.02e-48 179
MS.gene72930.t1 AT2G03480 30.282 284 184 3 84 358 84 362 4.16e-41 155

Find 160 sgRNAs with CRISPR-Local

Find 270 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTATCTAAATCACATAAAT+TGG 0.157551 8.2:-23329656 None:intergenic
CCTGCTATTATTGGTGTTCT+TGG 0.181876 8.2:+23329131 MS.gene72930:CDS
TGCAAGGCTGTCTCCCTTTC+CGG 0.190229 8.2:-23328068 None:intergenic
TATCTGGCCCTCCAATTAAT+TGG 0.198353 8.2:+23329467 MS.gene72930:CDS
ATCAAGAGGACAACAAATTA+TGG 0.295703 8.2:+23330008 MS.gene72930:CDS
ACAAGGTTCAGAAAATTGTT+AGG 0.303090 8.2:+23331012 MS.gene72930:CDS
TAGAGATGGACCGCATATTA+AGG 0.304977 8.2:+23330946 MS.gene72930:CDS
CTAATACCATGGGCTGAAAA+TGG 0.306663 8.2:+23329212 MS.gene72930:CDS
TCTCTAAAAGGATGTCTTCT+AGG 0.313204 8.2:-23330929 None:intergenic
CAAACTGAACTTGTGCTTCA+TGG 0.317331 8.2:-23329091 None:intergenic
GGCTGGTTACCTCGGGGATA+GGG 0.326072 8.2:-23329880 None:intergenic
CCTTCGTTCGCTTCCATGTT+TGG 0.326669 8.2:-23329501 None:intergenic
ATATGCGGTCCATCTCTAAA+AGG 0.333621 8.2:-23330941 None:intergenic
CTAGAGAAAACATGATCTAT+AGG 0.334371 8.2:+23328278 MS.gene72930:CDS
TGGAGAAGGCTAATCAAAAC+TGG 0.334883 8.2:+23328437 MS.gene72930:CDS
CGAGGGGTACCTGCTATTAT+TGG 0.338287 8.2:+23329122 MS.gene72930:CDS
ATAACGTCTTTAGCTATTCT+AGG 0.339212 8.2:-23329962 None:intergenic
TACAATAACCAATATCTTCT+CGG 0.340229 8.2:-23331087 None:intergenic
GATTATGCAGGTTGCGAGTT+GGG 0.346051 8.2:+23329013 MS.gene72930:intron
ACAATTGCTGACAACACTTT+AGG 0.348076 8.2:+23330175 MS.gene72930:CDS
GGTTATTGTAAAAGAGTATT+GGG 0.355588 8.2:+23331100 MS.gene72930:CDS
ATTTGCACCCGAGAAGATAT+TGG 0.359714 8.2:+23331079 MS.gene72930:CDS
AATGAGATGGGAATCTAAAA+TGG 0.360431 8.2:+23331037 MS.gene72930:CDS
AATTTCTACATATTTGTGTT+GGG 0.361502 8.2:-23328155 None:intergenic
CGGATTATGACCGATCCTTC+TGG 0.383497 8.2:-23330969 None:intergenic
GGGAATGTGTTCAAATTTCC+AGG 0.385082 8.2:+23328472 MS.gene72930:CDS
TAGAGAAAACATGATCTATA+GGG 0.387569 8.2:+23328279 MS.gene72930:CDS
AATATCTTCTCGGGTGCAAA+TGG 0.387847 8.2:-23331077 None:intergenic
CAAGGTTCAGAAAATTGTTA+GGG 0.396641 8.2:+23331013 MS.gene72930:CDS
TCCGGCAACTTCACTTTGGC+TGG 0.396919 8.2:-23329897 None:intergenic
TGGCTGGTTACCTCGGGGAT+AGG 0.400033 8.2:-23329881 None:intergenic
ATAGCTAAAGACGTTATTCC+AGG 0.406709 8.2:+23329968 MS.gene72930:CDS
TCACTTTGGCTGGTTACCTC+GGG 0.406855 8.2:-23329887 None:intergenic
AAAGGAGTCGTGTACCCTTC+GGG 0.407789 8.2:-23328352 None:intergenic
CTGACAGTACCATCTTTGAT+TGG 0.409983 8.2:-23328556 None:intergenic
AAAAGGGCGATATCGCTATC+TGG 0.411310 8.2:+23329593 MS.gene72930:CDS
TAGATAATGCTGATGATGTT+TGG 0.414758 8.2:+23329671 MS.gene72930:CDS
GGGAGACAGCCTTGCATTGA+AGG 0.415396 8.2:+23328075 MS.gene72930:CDS
GTTCTCGTTGTCTAATACCA+TGG 0.415422 8.2:+23329201 MS.gene72930:CDS
TGGGGTTCAAAATTCAAATT+CGG 0.428738 8.2:-23328136 None:intergenic
ATCTAGCCGAAAGTCTTTGC+TGG 0.428753 8.2:+23329557 MS.gene72930:CDS
CTCTAGGGAATGTCATTGCT+CGG 0.429428 8.2:-23328261 None:intergenic
CAGCATTGGACACTGGTTGC+GGG 0.430729 8.2:+23328581 MS.gene72930:CDS
TCCACTGTCAGATGCTTGTA+AGG 0.431312 8.2:-23328418 None:intergenic
CAAAACTGGGTGAAATTTGA+AGG 0.440422 8.2:+23328451 MS.gene72930:CDS
TCATTGCTCGGTCTTGCTCT+TGG 0.442210 8.2:-23328249 None:intergenic
TGTGCTTCATGGTTATCCTT+CGG 0.442466 8.2:-23329080 None:intergenic
GTAAGGAACATTAGCATAGT+AGG 0.443219 8.2:-23328401 None:intergenic
TAAAGTGTTGTCAGCAATTG+TGG 0.446000 8.2:-23330173 None:intergenic
GTCGTGTACCCTTCGGGAGC+AGG 0.448795 8.2:-23328346 None:intergenic
AAAAGGAGTCGTGTACCCTT+CGG 0.449355 8.2:-23328353 None:intergenic
TGGTTATTGTAAAAGAGTAT+TGG 0.449942 8.2:+23331099 MS.gene72930:CDS
TTCACTTTGGCTGGTTACCT+CGG 0.450057 8.2:-23329888 None:intergenic
TCGTGCTCTGTTGCCCGGTA+AGG 0.451040 8.2:-23327969 None:intergenic
ACCGAAAGCTAAAATGTTCA+AGG 0.457641 8.2:+23328192 MS.gene72930:CDS
ACAATAACCAATATCTTCTC+GGG 0.458082 8.2:-23331086 None:intergenic
CTCCTCCGGCAACTTCACTT+TGG 0.458578 8.2:-23329901 None:intergenic
CAATTTCTACATATTTGTGT+TGG 0.459965 8.2:-23328156 None:intergenic
ATCTATGAAAGAGGTCTCAT+TGG 0.460262 8.2:+23330202 MS.gene72930:CDS
TGCAGAGGGCATGTATCTAA+TGG 0.460772 8.2:+23329405 MS.gene72930:intron
ATGGACATGAATGCAGGCCT+TGG 0.463464 8.2:+23330097 MS.gene72930:CDS
ACATGGCAAAGCAGTGGTTC+CGG 0.463502 8.2:+23328049 MS.gene72930:CDS
TTAGGTGTTATCTATGAAAG+AGG 0.473905 8.2:+23330193 MS.gene72930:CDS
GGCCTTCGTGCTCTGTTGCC+CGG 0.478298 8.2:-23327974 None:intergenic
CAAAGCAGTGGTTCCGGAAA+GGG 0.478553 8.2:+23328055 MS.gene72930:CDS
ACCAGCCAAAGTGAAGTTGC+CGG 0.483225 8.2:+23329896 MS.gene72930:CDS
GGGACTGCAAACAGCCTAGC+AGG 0.484901 8.2:-23329938 None:intergenic
GACATGAATGCAGGCCTTGG+AGG 0.485877 8.2:+23330100 MS.gene72930:CDS
TGATCGGCACCACTAGATAT+CGG 0.486791 8.2:+23330068 MS.gene72930:CDS
AGCACAAGTTCAGTTTGCAT+TGG 0.488386 8.2:+23329097 MS.gene72930:CDS
CTGGGAAAAGAAGTATGAAA+AGG 0.490567 8.2:+23329576 MS.gene72930:CDS
TCATTGGTATTTATCATGAC+TGG 0.490759 8.2:+23330218 MS.gene72930:CDS
AAACTTCTTCAATTCTCCTC+CGG 0.491193 8.2:-23329915 None:intergenic
TATACGCATCGGCTCCTTGA+GGG 0.491733 8.2:-23328510 None:intergenic
GGGAACATGGTTCCTCCACC+TGG 0.492570 8.2:-23328490 None:intergenic
TATGATCTTATTCATGCCAA+TGG 0.492874 8.2:+23330426 MS.gene72930:CDS
ATTGTAAAAGAGTATTGGGT+TGG 0.493911 8.2:+23331104 MS.gene72930:CDS
TTATCTAAATCACATAAATT+GGG 0.494725 8.2:-23329655 None:intergenic
TGAATAAGATCATATGTCCT+TGG 0.500320 8.2:-23330417 None:intergenic
ACAGCATTGGACACTGGTTG+CGG 0.504094 8.2:+23328580 MS.gene72930:CDS
AAAAGAATTAATAGATTGAT+CGG 0.507870 8.2:+23330052 MS.gene72930:CDS
TGCCTCATTCCTGCTCCCGA+AGG 0.510952 8.2:+23328337 MS.gene72930:CDS
AGGAAGAAACTTACTTGTCC+TGG 0.512195 8.2:-23330464 None:intergenic
AGCTATGTCATTTGCTCCGA+AGG 0.512623 8.2:+23329064 MS.gene72930:CDS
AATTGTTAGGGGAATGAGAT+GGG 0.515509 8.2:+23331025 MS.gene72930:CDS
AACAGTTGATTCTTATCAAG+AGG 0.515523 8.2:+23329994 MS.gene72930:CDS
GCTCGGTCTTGCTCTTGGCA+AGG 0.517894 8.2:-23328244 None:intergenic
GTGTTCAAATTTCCAGGTGG+AGG 0.519025 8.2:+23328478 MS.gene72930:CDS
TAAGAATCAACTGTTACGCC+TGG 0.523031 8.2:-23329986 None:intergenic
CAAGCATCTGACAGTGGAGA+AGG 0.525351 8.2:+23328423 MS.gene72930:CDS
TCAAAGGCTCGTGATGGGAA+TGG 0.531393 8.2:-23329167 None:intergenic
GTACAAACTAAATAAACCAT+TGG 0.532852 8.2:-23330442 None:intergenic
TCTTATTTACCTTCAATGCA+AGG 0.533350 8.2:-23328084 None:intergenic
ATTATGCAGGTTGCGAGTTG+GGG 0.534569 8.2:+23329014 MS.gene72930:intron
ATTGAAGGTAAATAAGATGC+AGG 0.535476 8.2:+23328090 MS.gene72930:CDS
CACTAGATATCGGAATGTAA+TGG 0.536983 8.2:+23330078 MS.gene72930:CDS
GCTGGTTACCTCGGGGATAG+GGG 0.539426 8.2:-23329879 None:intergenic
TTCTCGTTGTCTAATACCAT+GGG 0.539833 8.2:+23329202 MS.gene72930:CDS
GACATATCAAAGGCTCGTGA+TGG 0.541258 8.2:-23329173 None:intergenic
ATCTAAAATGGTGGATCATG+AGG 0.541586 8.2:+23331049 MS.gene72930:CDS
ATTTCTACATATTTGTGTTG+GGG 0.545040 8.2:-23328154 None:intergenic
TGGTTTATTTAGTTTGTACC+AGG 0.546436 8.2:+23330446 MS.gene72930:CDS
ATATCTTCTCGGGTGCAAAT+GGG 0.548383 8.2:-23331076 None:intergenic
GCCTCATTCCTGCTCCCGAA+GGG 0.551559 8.2:+23328338 MS.gene72930:CDS
ACCCTTCGGGAGCAGGAATG+AGG 0.552400 8.2:-23328339 None:intergenic
CATATTAAGGCCAGAAGGAT+CGG 0.556558 8.2:+23330959 MS.gene72930:CDS
TTCAGTTTGCATTGGAACGA+GGG 0.556579 8.2:+23329105 MS.gene72930:CDS
AAAACATGATCTATAGGGAA+AGG 0.562202 8.2:+23328284 MS.gene72930:CDS
AATTGAAGAAGTTTCCTGCT+AGG 0.562951 8.2:+23329924 MS.gene72930:CDS
TGATTATGCAGGTTGCGAGT+TGG 0.564155 8.2:+23329012 MS.gene72930:intron
TCGGTTATTCCAATCAAAGA+TGG 0.565140 8.2:+23328547 MS.gene72930:CDS
GCAAAGCAGTGGTTCCGGAA+AGG 0.568170 8.2:+23328054 MS.gene72930:CDS
GCGAACGAAGGAGGATCTGA+AGG 0.569849 8.2:+23329513 MS.gene72930:CDS
CGTCTTTAGCTATTCTAGGA+GGG 0.573557 8.2:-23329958 None:intergenic
CCAAGAACACCAATAATAGC+AGG 0.574717 8.2:-23329131 None:intergenic
AATGTAATGGACATGAATGC+AGG 0.577859 8.2:+23330091 MS.gene72930:CDS
ATCCTTCTGGCCTTAATATG+CGG 0.578717 8.2:-23330956 None:intergenic
TGGGAAAAGAAGTATGAAAA+GGG 0.579153 8.2:+23329577 MS.gene72930:CDS
ATCGGCTCCTTGAGGGAACA+TGG 0.579987 8.2:-23328503 None:intergenic
AAGGCATTGTCCACCTCAAG+AGG 0.580231 8.2:+23328303 MS.gene72930:CDS
ACGTCTTTAGCTATTCTAGG+AGG 0.584489 8.2:-23329959 None:intergenic
ACATATCAAAGGCTCGTGAT+GGG 0.586233 8.2:-23329172 None:intergenic
TCTAGCCGAAAGTCTTTGCT+GGG 0.586847 8.2:+23329558 MS.gene72930:CDS
CATTACATTCCGATATCTAG+TGG 0.587708 8.2:-23330077 None:intergenic
GTTCAGTTTGCATTGGAACG+AGG 0.591548 8.2:+23329104 MS.gene72930:CDS
TGGTACTGTCAGAACAGCAT+TGG 0.594187 8.2:+23328567 MS.gene72930:CDS
CTCGTGATGGGAATGGAAGA+CGG 0.594874 8.2:-23329160 None:intergenic
CGAAGTTGATGTGATTAACA+AGG 0.596587 8.2:+23330995 MS.gene72930:CDS
TTGGGAACATGGCAAAGCAG+TGG 0.599535 8.2:+23328043 MS.gene72930:CDS
GTGCAGCTGCAAATCCTCCA+AGG 0.600414 8.2:-23330114 None:intergenic
GGAAAACGTACTACCAAACA+TGG 0.600730 8.2:+23329488 MS.gene72930:CDS
AAAACTGGGTGAAATTTGAA+GGG 0.602703 8.2:+23328452 MS.gene72930:CDS
AGCATTGGACACTGGTTGCG+GGG 0.605572 8.2:+23328582 MS.gene72930:CDS
AAAGTGTTGTCAGCAATTGT+GGG 0.608729 8.2:-23330172 None:intergenic
AAATTGTTAGGGGAATGAGA+TGG 0.612828 8.2:+23331024 MS.gene72930:CDS
GAGATGGGAATCTAAAATGG+TGG 0.616902 8.2:+23331040 MS.gene72930:CDS
GTCAGAACAGCATTGGACAC+TGG 0.619837 8.2:+23328574 MS.gene72930:CDS
AAGCTCATCAATATACGCAT+CGG 0.620380 8.2:-23328521 None:intergenic
AACATGGAAGCGAACGAAGG+AGG 0.623111 8.2:+23329504 MS.gene72930:CDS
AAAATGGTGGATCATGAGGA+TGG 0.624067 8.2:+23331053 MS.gene72930:CDS
GGAGGAACCATGTTCCCTCA+AGG 0.625347 8.2:+23328496 MS.gene72930:CDS
CACTTTGGCTGGTTACCTCG+GGG 0.630898 8.2:-23329886 None:intergenic
GTATATTGATGAGCTTGCAT+CGG 0.639331 8.2:+23328528 MS.gene72930:CDS
ATATACGCATCGGCTCCTTG+AGG 0.645967 8.2:-23328511 None:intergenic
GACCGCATATTAAGGCCAGA+AGG 0.646017 8.2:+23330954 MS.gene72930:CDS
GGAGAAGGCTAATCAAAACT+GGG 0.651414 8.2:+23328438 MS.gene72930:CDS
CCAAACATGGAAGCGAACGA+AGG 0.652207 8.2:+23329501 MS.gene72930:CDS
TAGCATAGTAGGCATAATCA+CGG 0.653977 8.2:-23328390 None:intergenic
GATAAAATCCAAAATCCACC+AGG 0.658663 8.2:-23329448 None:intergenic
TCAGTTTGCATTGGAACGAG+GGG 0.665623 8.2:+23329106 MS.gene72930:CDS
AGCACAGCGAAAATTGACAA+AGG 0.667719 8.2:-23327995 None:intergenic
AAGGTTCAGAAAATTGTTAG+GGG 0.677847 8.2:+23331014 MS.gene72930:CDS
TCCTTACAAGCATCTGACAG+TGG 0.686028 8.2:+23328417 MS.gene72930:CDS
AGCCAAAGTGAAGTTGCCGG+AGG 0.689567 8.2:+23329899 MS.gene72930:CDS
AGAACACTGAGACATATCAA+AGG 0.695313 8.2:-23329183 None:intergenic
AGGGCGATATCGCTATCTGG+AGG 0.701556 8.2:+23329596 MS.gene72930:CDS
TACCGGGCAACAGAGCACGA+AGG 0.713915 8.2:+23327972 MS.gene72930:CDS
TAATCACATCAACTTCGTCG+CGG 0.731217 8.2:-23330989 None:intergenic
AATGTGTTCAAATTTCCAGG+TGG 0.732268 8.2:+23328475 MS.gene72930:CDS
CTGCAAAACCCCTATCCCCG+AGG 0.738570 8.2:+23329871 MS.gene72930:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATTAAACTGATATTTA+TGG + chr8.2:23330322-23330341 MS.gene72930:intron 10.0%
!! AAAAGAATTAATAGATTGAT+CGG + chr8.2:23330052-23330071 MS.gene72930:CDS 15.0%
!! AAATAACATACTATATCAAA+AGG - chr8.2:23328629-23328648 None:intergenic 15.0%
!! AATTATGTGTAATGTATAAT+GGG + chr8.2:23328816-23328835 MS.gene72930:intron 15.0%
!! ATGATTATATTTAGAAGTTA+AGG - chr8.2:23329317-23329336 None:intergenic 15.0%
!! ATTATCTAAATCACATAAAT+TGG - chr8.2:23329659-23329678 None:intergenic 15.0%
!! TAATTATGTGTAATGTATAA+TGG + chr8.2:23328815-23328834 MS.gene72930:intron 15.0%
!! TTATCTAAATCACATAAATT+GGG - chr8.2:23329658-23329677 None:intergenic 15.0%
!!! AATTAATCATTTTAGAGTAT+AGG - chr8.2:23330309-23330328 None:intergenic 15.0%
!!! TATTTATGGATATTTTGTTA+TGG + chr8.2:23330336-23330355 MS.gene72930:intron 15.0%
!! AAATTTGACATCAAATTTGA+TGG + chr8.2:23328677-23328696 MS.gene72930:intron 20.0%
!! AATTTCTACATATTTGTGTT+GGG - chr8.2:23328158-23328177 None:intergenic 20.0%
!! ATTATGTGTAATGTATAATG+GGG + chr8.2:23328817-23328836 MS.gene72930:intron 20.0%
!! GATGATTAATGAATATAACA+AGG + chr8.2:23328735-23328754 MS.gene72930:intron 20.0%
!! TTAAACACATTTGAAAATTG+TGG - chr8.2:23328798-23328817 None:intergenic 20.0%
!! TTGATACCATCTTAAAATTT+AGG - chr8.2:23330728-23330747 None:intergenic 20.0%
!!! TGTTGTTTGTTTTATCTTTT+GGG + chr8.2:23328025-23328044 MS.gene72930:CDS 20.0%
! AAGTCTATTCAAGATTTCAT+TGG + chr8.2:23330747-23330766 MS.gene72930:intron 25.0%
! AAGTTAAGGAATATCATCAT+CGG - chr8.2:23329303-23329322 None:intergenic 25.0%
! ACACTGAAAATTGAGAAATT+TGG - chr8.2:23328859-23328878 None:intergenic 25.0%
! ACTTGAATCACAAAAATCTT+GGG + chr8.2:23330135-23330154 MS.gene72930:CDS 25.0%
! ATTTCTACATATTTGTGTTG+GGG - chr8.2:23328157-23328176 None:intergenic 25.0%
! CAATTTCTACATATTTGTGT+TGG - chr8.2:23328159-23328178 None:intergenic 25.0%
! CCTGAAAATATGTTTATAAG+TGG + chr8.2:23330649-23330668 MS.gene72930:intron 25.0%
! GTAAGCATTAAAACAAAGAA+AGG - chr8.2:23328912-23328931 None:intergenic 25.0%
! GTACAAACTAAATAAACCAT+TGG - chr8.2:23330445-23330464 None:intergenic 25.0%
! TAATGGTAGGTACAAAAAAA+TGG + chr8.2:23329844-23329863 MS.gene72930:intron 25.0%
! TACAATAACCAATATCTTCT+CGG - chr8.2:23331090-23331109 None:intergenic 25.0%
! TAGAGAAAACATGATCTATA+GGG + chr8.2:23328279-23328298 MS.gene72930:CDS 25.0%
! TGTATTTAGTATACTGAAGT+CGG + chr8.2:23328876-23328895 MS.gene72930:intron 25.0%
! TTCATATAATTCCACGATTT+CGG + chr8.2:23329775-23329794 MS.gene72930:intron 25.0%
!! CCACTTATAAACATATTTTC+AGG - chr8.2:23330652-23330671 None:intergenic 25.0%
!! GATCTAGAATACAGTATTAT+CGG + chr8.2:23329265-23329284 MS.gene72930:intron 25.0%
!! TAGTACGTTTTCCAATTAAT+TGG - chr8.2:23329481-23329500 None:intergenic 25.0%
!! TATAGATCATGTTTTCTCTA+GGG - chr8.2:23328279-23328298 None:intergenic 25.0%
!! TGGTTATTGTAAAAGAGTAT+TGG + chr8.2:23331099-23331118 MS.gene72930:CDS 25.0%
!!! CTGTTTTTTTTCCTAGAATT+CGG - chr8.2:23330837-23330856 None:intergenic 25.0%
!!! GGTTATTGTAAAAGAGTATT+GGG + chr8.2:23331100-23331119 MS.gene72930:CDS 25.0%
!!! GTGTTGTTTGTTTTATCTTT+TGG + chr8.2:23328024-23328043 MS.gene72930:CDS 25.0%
!!! TGTTTTTTTTCCTAGAATTC+GGG - chr8.2:23330836-23330855 None:intergenic 25.0%
!!! TTCTTTGTTTTAATGCTTAC+TGG + chr8.2:23328912-23328931 MS.gene72930:intron 25.0%
!!! TTTACTGATTTTTCCAATTC+TGG + chr8.2:23330579-23330598 MS.gene72930:intron 25.0%
AAAACATGATCTATAGGGAA+AGG + chr8.2:23328284-23328303 MS.gene72930:CDS 30.0%
AAAACTGGGTGAAATTTGAA+GGG + chr8.2:23328452-23328471 MS.gene72930:CDS 30.0%
AAGGTTCAGAAAATTGTTAG+GGG + chr8.2:23331014-23331033 MS.gene72930:CDS 30.0%
AATGAGATGGGAATCTAAAA+TGG + chr8.2:23331037-23331056 MS.gene72930:CDS 30.0%
ACAAGGTTCAGAAAATTGTT+AGG + chr8.2:23331012-23331031 MS.gene72930:CDS 30.0%
ACAATAACCAATATCTTCTC+GGG - chr8.2:23331089-23331108 None:intergenic 30.0%
ACAATCAAGAAGCAATTGAA+AGG - chr8.2:23328972-23328991 None:intergenic 30.0%
AGGTCTAATCTTATCAAATG+TGG - chr8.2:23330632-23330651 None:intergenic 30.0%
AGTCTCAATTATACCAGAAT+TGG - chr8.2:23330595-23330614 None:intergenic 30.0%
ATAACGTCTTTAGCTATTCT+AGG - chr8.2:23329965-23329984 None:intergenic 30.0%
ATCAAGAGGACAACAAATTA+TGG + chr8.2:23330008-23330027 MS.gene72930:CDS 30.0%
ATTATCACTATGATCACTTG+TGG - chr8.2:23330497-23330516 None:intergenic 30.0%
ATTGAAGGTAAATAAGATGC+AGG + chr8.2:23328090-23328109 MS.gene72930:CDS 30.0%
CAAGGTTCAGAAAATTGTTA+GGG + chr8.2:23331013-23331032 MS.gene72930:CDS 30.0%
CAAGTGATCATAGTGATAAT+TGG + chr8.2:23330497-23330516 MS.gene72930:intron 30.0%
CACTTGAATCACAAAAATCT+TGG + chr8.2:23330134-23330153 MS.gene72930:CDS 30.0%
CTAGAGAAAACATGATCTAT+AGG + chr8.2:23328278-23328297 MS.gene72930:CDS 30.0%
GGTCTAATCTTATCAAATGT+GGG - chr8.2:23330631-23330650 None:intergenic 30.0%
GTCTAATCTTATCAAATGTG+GGG - chr8.2:23330630-23330649 None:intergenic 30.0%
TATGATCTTATTCATGCCAA+TGG + chr8.2:23330426-23330445 MS.gene72930:CDS 30.0%
TCATTGGTATTTATCATGAC+TGG + chr8.2:23330218-23330237 MS.gene72930:CDS 30.0%
TCTTACAAAATCAGCTTGTA+AGG - chr8.2:23330688-23330707 None:intergenic 30.0%
TGAATAAGATCATATGTCCT+TGG - chr8.2:23330420-23330439 None:intergenic 30.0%
TGGGGTTCAAAATTCAAATT+CGG - chr8.2:23328139-23328158 None:intergenic 30.0%
! AACAGTTGATTCTTATCAAG+AGG + chr8.2:23329994-23330013 MS.gene72930:CDS 30.0%
! ACGTTTTCCAATTAATTGGA+GGG - chr8.2:23329477-23329496 None:intergenic 30.0%
! CTATAGATCATGTTTTCTCT+AGG - chr8.2:23328280-23328299 None:intergenic 30.0%
! GTACCTACCATTACAAATTT+TGG - chr8.2:23329837-23329856 None:intergenic 30.0%
! TACGTTTTCCAATTAATTGG+AGG - chr8.2:23329478-23329497 None:intergenic 30.0%
! TAGATAATGCTGATGATGTT+TGG + chr8.2:23329671-23329690 MS.gene72930:CDS 30.0%
! TCTTATTTACCTTCAATGCA+AGG - chr8.2:23328087-23328106 None:intergenic 30.0%
! TGGGAAAAGAAGTATGAAAA+GGG + chr8.2:23329577-23329596 MS.gene72930:CDS 30.0%
! TTAGGTGTTATCTATGAAAG+AGG + chr8.2:23330193-23330212 MS.gene72930:CDS 30.0%
!! ATTGTAAAAGAGTATTGGGT+TGG + chr8.2:23331104-23331123 MS.gene72930:CDS 30.0%
!! GTATTGTTGATTTGATTGAC+AGG + chr8.2:23330901-23330920 MS.gene72930:intron 30.0%
!! TATAATGGGGTTTTGTCTAT+TGG + chr8.2:23328830-23328849 MS.gene72930:intron 30.0%
!! TGGTTTATTTAGTTTGTACC+AGG + chr8.2:23330446-23330465 MS.gene72930:CDS 30.0%
!! TGTTTTATCTTTTGGGAACA+TGG + chr8.2:23328032-23328051 MS.gene72930:CDS 30.0%
AAACTTCTTCAATTCTCCTC+CGG - chr8.2:23329918-23329937 None:intergenic 35.0%
AAATTGTTAGGGGAATGAGA+TGG + chr8.2:23331024-23331043 MS.gene72930:CDS 35.0%
AAGCTCATCAATATACGCAT+CGG - chr8.2:23328524-23328543 None:intergenic 35.0%
AATGTGTTCAAATTTCCAGG+TGG + chr8.2:23328475-23328494 MS.gene72930:CDS 35.0%
AATTGAAGAAGTTTCCTGCT+AGG + chr8.2:23329924-23329943 MS.gene72930:CDS 35.0%
AATTGTTAGGGGAATGAGAT+GGG + chr8.2:23331025-23331044 MS.gene72930:CDS 35.0%
ACAATTGCTGACAACACTTT+AGG + chr8.2:23330175-23330194 MS.gene72930:CDS 35.0%
ACCCAATAATTGAATGCAGA+GGG + chr8.2:23329391-23329410 MS.gene72930:intron 35.0%
ACCGAAAGCTAAAATGTTCA+AGG + chr8.2:23328192-23328211 MS.gene72930:CDS 35.0%
AGAACACTGAGACATATCAA+AGG - chr8.2:23329186-23329205 None:intergenic 35.0%
ATAAGCGTGAATGATTATGC+AGG + chr8.2:23329001-23329020 MS.gene72930:intron 35.0%
ATACTGAAAGGAAGTAAACC+GGG - chr8.2:23328946-23328965 None:intergenic 35.0%
ATAGCTAAAGACGTTATTCC+AGG + chr8.2:23329968-23329987 MS.gene72930:CDS 35.0%
ATCTATGAAAGAGGTCTCAT+TGG + chr8.2:23330202-23330221 MS.gene72930:CDS 35.0%
ATGGTTACTATTCAGATGTG+TGG + chr8.2:23328696-23328715 MS.gene72930:intron 35.0%
CAAAACTGGGTGAAATTTGA+AGG + chr8.2:23328451-23328470 MS.gene72930:CDS 35.0%
CACTAGATATCGGAATGTAA+TGG + chr8.2:23330078-23330097 MS.gene72930:CDS 35.0%
CATACTGAAAGGAAGTAAAC+CGG - chr8.2:23328947-23328966 None:intergenic 35.0%
CATTACATTCCGATATCTAG+TGG - chr8.2:23330080-23330099 None:intergenic 35.0%
CCATGCTCCAAAATTTGTAA+TGG + chr8.2:23329827-23329846 MS.gene72930:intron 35.0%
GAAGTGTGTAGAAATGATCA+GGG - chr8.2:23329701-23329720 None:intergenic 35.0%
GATAAAATCCAAAATCCACC+AGG - chr8.2:23329451-23329470 None:intergenic 35.0%
GCTCCAAAATTTGTAATGGT+AGG + chr8.2:23329831-23329850 MS.gene72930:intron 35.0%
GTAAGGAACATTAGCATAGT+AGG - chr8.2:23328404-23328423 None:intergenic 35.0%
GTATATTGATGAGCTTGCAT+CGG + chr8.2:23328528-23328547 MS.gene72930:CDS 35.0%
TAGCATAGTAGGCATAATCA+CGG - chr8.2:23328393-23328412 None:intergenic 35.0%
TCGGTTATTCCAATCAAAGA+TGG + chr8.2:23328547-23328566 MS.gene72930:CDS 35.0%
TGAAGTGTGTAGAAATGATC+AGG - chr8.2:23329702-23329721 None:intergenic 35.0%
TGGTAGGTACAAAAAAATGG+AGG + chr8.2:23329847-23329866 MS.gene72930:intron 35.0%
TTCTCGTTGTCTAATACCAT+GGG + chr8.2:23329202-23329221 MS.gene72930:CDS 35.0%
! AAGGCTTTTCTACATATCCA+AGG + chr8.2:23330400-23330419 MS.gene72930:CDS 35.0%
! ATTGAAAGGTGCATACTGAA+AGG - chr8.2:23328958-23328977 None:intergenic 35.0%
! CTGGGAAAAGAAGTATGAAA+AGG + chr8.2:23329576-23329595 MS.gene72930:CDS 35.0%
! GACATTCGTTTTCTTTCTTC+AGG + chr8.2:23330373-23330392 MS.gene72930:intron 35.0%
! TCTCTAAAAGGATGTCTTCT+AGG - chr8.2:23330932-23330951 None:intergenic 35.0%
! TTTTCTTTCTTCAGGTGTGA+AGG + chr8.2:23330381-23330400 MS.gene72930:intron 35.0%
!! AAAGTGTTGTCAGCAATTGT+GGG - chr8.2:23330175-23330194 None:intergenic 35.0%
!! AATGTAATGGACATGAATGC+AGG + chr8.2:23330091-23330110 MS.gene72930:CDS 35.0%
!! AGAAGACATCCTTTTAGAGA+TGG + chr8.2:23330932-23330951 MS.gene72930:CDS 35.0%
!! ATCTAAAATGGTGGATCATG+AGG + chr8.2:23331049-23331068 MS.gene72930:CDS 35.0%
!! CGAAGTTGATGTGATTAACA+AGG + chr8.2:23330995-23331014 MS.gene72930:CDS 35.0%
!! GCTCGACCTAAATTTTAAGA+TGG + chr8.2:23330719-23330738 MS.gene72930:intron 35.0%
!! GGTGGATTTTGGATTTTATC+TGG + chr8.2:23329451-23329470 MS.gene72930:CDS 35.0%
!! TAAAGTGTTGTCAGCAATTG+TGG - chr8.2:23330176-23330195 None:intergenic 35.0%
!! TGGAAGTTGATCGAGTTTTA+AGG + chr8.2:23329425-23329444 MS.gene72930:CDS 35.0%
!!! CCATTACAAATTTTGGAGCA+TGG - chr8.2:23329830-23329849 None:intergenic 35.0%
!!! GAACATTTTAGCTTTCGGTT+CGG - chr8.2:23328191-23328210 None:intergenic 35.0%
!!! GCCTTGAACATTTTAGCTTT+CGG - chr8.2:23328196-23328215 None:intergenic 35.0%
AATATCTTCTCGGGTGCAAA+TGG - chr8.2:23331080-23331099 None:intergenic 40.0%
ACATATCAAAGGCTCGTGAT+GGG - chr8.2:23329175-23329194 None:intergenic 40.0%
ACGTCTTTAGCTATTCTAGG+AGG - chr8.2:23329962-23329981 None:intergenic 40.0%
AGCACAAGTTCAGTTTGCAT+TGG + chr8.2:23329097-23329116 MS.gene72930:CDS 40.0%
AGCACAGCGAAAATTGACAA+AGG - chr8.2:23327998-23328017 None:intergenic 40.0%
AGGAAGAAACTTACTTGTCC+TGG - chr8.2:23330467-23330486 None:intergenic 40.0%
ATATCTTCTCGGGTGCAAAT+GGG - chr8.2:23331079-23331098 None:intergenic 40.0%
ATATGCGGTCCATCTCTAAA+AGG - chr8.2:23330944-23330963 None:intergenic 40.0%
ATTTGCACCCGAGAAGATAT+TGG + chr8.2:23331079-23331098 MS.gene72930:CDS 40.0%
CAAAATCAGCTTGTAAGGTG+AGG - chr8.2:23330683-23330702 None:intergenic 40.0%
CAAACTGAACTTGTGCTTCA+TGG - chr8.2:23329094-23329113 None:intergenic 40.0%
CACCCAATAATTGAATGCAG+AGG + chr8.2:23329390-23329409 MS.gene72930:intron 40.0%
CATATTAAGGCCAGAAGGAT+CGG + chr8.2:23330959-23330978 MS.gene72930:CDS 40.0%
CCAAGAACACCAATAATAGC+AGG - chr8.2:23329134-23329153 None:intergenic 40.0%
CCTAATCTAACCCGAATTCT+AGG + chr8.2:23330823-23330842 MS.gene72930:intron 40.0%
CGCATTATAATCCGAAATCG+TGG - chr8.2:23329789-23329808 None:intergenic 40.0%
CTGACAGTACCATCTTTGAT+TGG - chr8.2:23328559-23328578 None:intergenic 40.0%
GCCCTCTGCATTCAATTATT+GGG - chr8.2:23329395-23329414 None:intergenic 40.0%
GGAAAACGTACTACCAAACA+TGG + chr8.2:23329488-23329507 MS.gene72930:CDS 40.0%
GGAGAAGGCTAATCAAAACT+GGG + chr8.2:23328438-23328457 MS.gene72930:CDS 40.0%
GGGAATGTGTTCAAATTTCC+AGG + chr8.2:23328472-23328491 MS.gene72930:CDS 40.0%
GTTCTCGTTGTCTAATACCA+TGG + chr8.2:23329201-23329220 MS.gene72930:CDS 40.0%
TAAGAATCAACTGTTACGCC+TGG - chr8.2:23329989-23330008 None:intergenic 40.0%
TAATCACATCAACTTCGTCG+CGG - chr8.2:23330992-23331011 None:intergenic 40.0%
TAGAGATGGACCGCATATTA+AGG + chr8.2:23330946-23330965 MS.gene72930:CDS 40.0%
TATCTGGCCCTCCAATTAAT+TGG + chr8.2:23329467-23329486 MS.gene72930:CDS 40.0%
TCACTATGATCACTTGTGGA+TGG - chr8.2:23330493-23330512 None:intergenic 40.0%
TGATCACTTGTGGATGGAAA+AGG - chr8.2:23330487-23330506 None:intergenic 40.0%
TGCCCTCTGCATTCAATTAT+TGG - chr8.2:23329396-23329415 None:intergenic 40.0%
TGGAGAAGGCTAATCAAAAC+TGG + chr8.2:23328437-23328456 MS.gene72930:CDS 40.0%
TGTGCTTCATGGTTATCCTT+CGG - chr8.2:23329083-23329102 None:intergenic 40.0%
TTCAGTTTGCATTGGAACGA+GGG + chr8.2:23329105-23329124 MS.gene72930:CDS 40.0%
TTGTGGTTAATTGTGCTCAG+TGG - chr8.2:23328781-23328800 None:intergenic 40.0%
! AATTCGGGTTAGATTAGGAC+TGG - chr8.2:23330821-23330840 None:intergenic 40.0%
! CAACGCAATTTTTCCTCTTG+AGG - chr8.2:23328319-23328338 None:intergenic 40.0%
! CCTAGAATTCGGGTTAGATT+AGG - chr8.2:23330826-23330845 None:intergenic 40.0%
! CCTGCTATTATTGGTGTTCT+TGG + chr8.2:23329131-23329150 MS.gene72930:CDS 40.0%
! CGTCTTTAGCTATTCTAGGA+GGG - chr8.2:23329961-23329980 None:intergenic 40.0%
! CTAATACCATGGGCTGAAAA+TGG + chr8.2:23329212-23329231 MS.gene72930:CDS 40.0%
! CTTTTCCCAGCAAAGACTTT+CGG - chr8.2:23329566-23329585 None:intergenic 40.0%
! GAGATGGGAATCTAAAATGG+TGG + chr8.2:23331040-23331059 MS.gene72930:CDS 40.0%
! TAGGCATAATCACGGCTTTT+AGG - chr8.2:23328385-23328404 None:intergenic 40.0%
!! AAAATGGTGGATCATGAGGA+TGG + chr8.2:23331053-23331072 MS.gene72930:CDS 40.0%
!! ATCCTTCTGGCCTTAATATG+CGG - chr8.2:23330959-23330978 None:intergenic 40.0%
!! GGGTTCTAAAAATGCCTTAC+CGG + chr8.2:23327955-23327974 MS.gene72930:CDS 40.0%
!! GGTTCTAAAAATGCCTTACC+GGG + chr8.2:23327956-23327975 MS.gene72930:CDS 40.0%
!! TATAGGAAGCTGACTTGCAA+GGG - chr8.2:23330292-23330311 None:intergenic 40.0%
!!! TTTTAAGGCCTGGTGGATTT+TGG + chr8.2:23329440-23329459 MS.gene72930:CDS 40.0%
AAAAGGAGTCGTGTACCCTT+CGG - chr8.2:23328356-23328375 None:intergenic 45.0%
AAAAGGGCGATATCGCTATC+TGG + chr8.2:23329593-23329612 MS.gene72930:CDS 45.0%
ACCATTAGGTCTCCTGCTAT+CGG + chr8.2:23330777-23330796 MS.gene72930:intron 45.0%
ATAGCAGGAGACCTAATGGT+GGG - chr8.2:23330777-23330796 None:intergenic 45.0%
ATCTAGCCGAAAGTCTTTGC+TGG + chr8.2:23329557-23329576 MS.gene72930:CDS 45.0%
ATTATGCAGGTTGCGAGTTG+GGG + chr8.2:23329014-23329033 MS.gene72930:intron 45.0%
GACATATCAAAGGCTCGTGA+TGG - chr8.2:23329176-23329195 None:intergenic 45.0%
GATTATGCAGGTTGCGAGTT+GGG + chr8.2:23329013-23329032 MS.gene72930:intron 45.0%
GGCAGAGCAGAAAAAAATCG+AGG + chr8.2:23329534-23329553 MS.gene72930:CDS 45.0%
GGTTAATTGTGCTCAGTGGA+TGG - chr8.2:23328777-23328796 None:intergenic 45.0%
GTGTTCAAATTTCCAGGTGG+AGG + chr8.2:23328478-23328497 MS.gene72930:CDS 45.0%
GTTCAGTTTGCATTGGAACG+AGG + chr8.2:23329104-23329123 MS.gene72930:CDS 45.0%
TCAGTTTGCATTGGAACGAG+GGG + chr8.2:23329106-23329125 MS.gene72930:CDS 45.0%
TCATTGGATCACCCACCATT+AGG + chr8.2:23330763-23330782 MS.gene72930:intron 45.0%
TCCACTGTCAGATGCTTGTA+AGG - chr8.2:23328421-23328440 None:intergenic 45.0%
TCCTTACAAGCATCTGACAG+TGG + chr8.2:23328417-23328436 MS.gene72930:CDS 45.0%
TCTAGCCGAAAGTCTTTGCT+GGG + chr8.2:23329558-23329577 MS.gene72930:CDS 45.0%
TGATCGGCACCACTAGATAT+CGG + chr8.2:23330068-23330087 MS.gene72930:CDS 45.0%
TGATTATGCAGGTTGCGAGT+TGG + chr8.2:23329012-23329031 MS.gene72930:intron 45.0%
TGGTACTGTCAGAACAGCAT+TGG + chr8.2:23328567-23328586 MS.gene72930:CDS 45.0%
TTTAATGCTTACTGGCCCAC+TGG + chr8.2:23328920-23328939 MS.gene72930:intron 45.0%
! AGCTATGTCATTTGCTCCGA+AGG + chr8.2:23329064-23329083 MS.gene72930:CDS 45.0%
! CACTAACCATTTTCAGCCCA+TGG - chr8.2:23329221-23329240 None:intergenic 45.0%
! CGCAATTTTTCCTCTTGAGG+TGG - chr8.2:23328316-23328335 None:intergenic 45.0%
! CTCTAGGGAATGTCATTGCT+CGG - chr8.2:23328264-23328283 None:intergenic 45.0%
! TAATCACGGCTTTTAGGCCA+TGG - chr8.2:23328379-23328398 None:intergenic 45.0%
! TGCAGAGGGCATGTATCTAA+TGG + chr8.2:23329405-23329424 MS.gene72930:intron 45.0%
! TTCACTTTGGCTGGTTACCT+CGG - chr8.2:23329891-23329910 None:intergenic 45.0%
!! GTATAGGAAGCTGACTTGCA+AGG - chr8.2:23330293-23330312 None:intergenic 45.0%
!!! GTTGATCGAGTTTTAAGGCC+TGG + chr8.2:23329430-23329449 MS.gene72930:CDS 45.0%
!!! AAATAGTAATATTTTATTTT+TGG - chr8.2:23330560-23330579 None:intergenic 5.0%
AAAGGAGTCGTGTACCCTTC+GGG - chr8.2:23328355-23328374 None:intergenic 50.0%
AACATGGAAGCGAACGAAGG+AGG + chr8.2:23329504-23329523 MS.gene72930:CDS 50.0%
ACATGGCAAAGCAGTGGTTC+CGG + chr8.2:23328049-23328068 MS.gene72930:CDS 50.0%
ACCAGCCAAAGTGAAGTTGC+CGG + chr8.2:23329896-23329915 MS.gene72930:CDS 50.0%
ATGGACATGAATGCAGGCCT+TGG + chr8.2:23330097-23330116 MS.gene72930:CDS 50.0%
CAAAGCAGTGGTTCCGGAAA+GGG + chr8.2:23328055-23328074 MS.gene72930:CDS 50.0%
CAAGCATCTGACAGTGGAGA+AGG + chr8.2:23328423-23328442 MS.gene72930:CDS 50.0%
CCAAACATGGAAGCGAACGA+AGG + chr8.2:23329501-23329520 MS.gene72930:CDS 50.0%
CCTTCGTTCGCTTCCATGTT+TGG - chr8.2:23329504-23329523 None:intergenic 50.0%
CGGATTATGACCGATCCTTC+TGG - chr8.2:23330972-23330991 None:intergenic 50.0%
GACCGCATATTAAGGCCAGA+AGG + chr8.2:23330954-23330973 MS.gene72930:CDS 50.0%
GATAGCAGGAGACCTAATGG+TGG - chr8.2:23330778-23330797 None:intergenic 50.0%
TCATTGCTCGGTCTTGCTCT+TGG - chr8.2:23328252-23328271 None:intergenic 50.0%
TCCGATAGCAGGAGACCTAA+TGG - chr8.2:23330781-23330800 None:intergenic 50.0%
TTGGGAACATGGCAAAGCAG+TGG + chr8.2:23328043-23328062 MS.gene72930:CDS 50.0%
! ACAGCATTGGACACTGGTTG+CGG + chr8.2:23328580-23328599 MS.gene72930:CDS 50.0%
! CGGCTTTTAGGCCATGGAAA+AGG - chr8.2:23328373-23328392 None:intergenic 50.0%
! CTCGTGATGGGAATGGAAGA+CGG - chr8.2:23329163-23329182 None:intergenic 50.0%
! GGTACACGACTCCTTTTCCA+TGG + chr8.2:23328359-23328378 MS.gene72930:CDS 50.0%
! GTCAGAACAGCATTGGACAC+TGG + chr8.2:23328574-23328593 MS.gene72930:CDS 50.0%
! TCAAAGGCTCGTGATGGGAA+TGG - chr8.2:23329170-23329189 None:intergenic 50.0%
! TCACTTTGGCTGGTTACCTC+GGG - chr8.2:23329890-23329909 None:intergenic 50.0%
!! AAGGCATTGTCCACCTCAAG+AGG + chr8.2:23328303-23328322 MS.gene72930:CDS 50.0%
!! ATATACGCATCGGCTCCTTG+AGG - chr8.2:23328514-23328533 None:intergenic 50.0%
!! CGAGGGGTACCTGCTATTAT+TGG + chr8.2:23329122-23329141 MS.gene72930:CDS 50.0%
!! TATACGCATCGGCTCCTTGA+GGG - chr8.2:23328513-23328532 None:intergenic 50.0%
!!! GATCGAGTTTTAAGGCCTGG+TGG + chr8.2:23329433-23329452 MS.gene72930:CDS 50.0%
AAGGAAGTAAACCGGGCCAG+TGG - chr8.2:23328939-23328958 None:intergenic 55.0%
AGCCAAAGTGAAGTTGCCGG+AGG + chr8.2:23329899-23329918 MS.gene72930:CDS 55.0%
AGGAAGTAAACCGGGCCAGT+GGG - chr8.2:23328938-23328957 None:intergenic 55.0%
AGGGCGATATCGCTATCTGG+AGG + chr8.2:23329596-23329615 MS.gene72930:CDS 55.0%
CTCCTCCGGCAACTTCACTT+TGG - chr8.2:23329904-23329923 None:intergenic 55.0%
GACATGAATGCAGGCCTTGG+AGG + chr8.2:23330100-23330119 MS.gene72930:CDS 55.0%
GCAAAGCAGTGGTTCCGGAA+AGG + chr8.2:23328054-23328073 MS.gene72930:CDS 55.0%
GCGAACGAAGGAGGATCTGA+AGG + chr8.2:23329513-23329532 MS.gene72930:CDS 55.0%
GGAGGAACCATGTTCCCTCA+AGG + chr8.2:23328496-23328515 MS.gene72930:CDS 55.0%
GGGAGACAGCCTTGCATTGA+AGG + chr8.2:23328075-23328094 MS.gene72930:CDS 55.0%
GTGCAGCTGCAAATCCTCCA+AGG - chr8.2:23330117-23330136 None:intergenic 55.0%
TCCGGCAACTTCACTTTGGC+TGG - chr8.2:23329900-23329919 None:intergenic 55.0%
TCTCCTGCTATCGGACCAGT+TGG + chr8.2:23330786-23330805 MS.gene72930:intron 55.0%
TGCAAGGCTGTCTCCCTTTC+CGG - chr8.2:23328071-23328090 None:intergenic 55.0%
! AGCATTGGACACTGGTTGCG+GGG + chr8.2:23328582-23328601 MS.gene72930:CDS 55.0%
! ATCGGCTCCTTGAGGGAACA+TGG - chr8.2:23328506-23328525 None:intergenic 55.0%
! CACTTTGGCTGGTTACCTCG+GGG - chr8.2:23329889-23329908 None:intergenic 55.0%
! CAGCATTGGACACTGGTTGC+GGG + chr8.2:23328581-23328600 MS.gene72930:CDS 55.0%
ACCCTTCGGGAGCAGGAATG+AGG - chr8.2:23328342-23328361 None:intergenic 60.0%
CTGCAAAACCCCTATCCCCG+AGG + chr8.2:23329871-23329890 MS.gene72930:CDS 60.0%
GACTGGAAGCCTGAGCCAAC+TGG - chr8.2:23330804-23330823 None:intergenic 60.0%
GAGCCAACTGGTCCGATAGC+AGG - chr8.2:23330792-23330811 None:intergenic 60.0%
GCCTCATTCCTGCTCCCGAA+GGG + chr8.2:23328338-23328357 MS.gene72930:CDS 60.0%
GCTCGGTCTTGCTCTTGGCA+AGG - chr8.2:23328247-23328266 None:intergenic 60.0%
GCTGGTTACCTCGGGGATAG+GGG - chr8.2:23329882-23329901 None:intergenic 60.0%
GGGAACATGGTTCCTCCACC+TGG - chr8.2:23328493-23328512 None:intergenic 60.0%
GGGACTGCAAACAGCCTAGC+AGG - chr8.2:23329941-23329960 None:intergenic 60.0%
TACCGGGCAACAGAGCACGA+AGG + chr8.2:23327972-23327991 MS.gene72930:CDS 60.0%
TCGTGCTCTGTTGCCCGGTA+AGG - chr8.2:23327972-23327991 None:intergenic 60.0%
TGCCTCATTCCTGCTCCCGA+AGG + chr8.2:23328337-23328356 MS.gene72930:CDS 60.0%
! GCTATCGGACCAGTTGGCTC+AGG + chr8.2:23330792-23330811 MS.gene72930:intron 60.0%
! GGCTGGTTACCTCGGGGATA+GGG - chr8.2:23329883-23329902 None:intergenic 60.0%
! TGGCTGGTTACCTCGGGGAT+AGG - chr8.2:23329884-23329903 None:intergenic 60.0%
GGCCTTCGTGCTCTGTTGCC+CGG - chr8.2:23327977-23327996 None:intergenic 65.0%
GTCGTGTACCCTTCGGGAGC+AGG - chr8.2:23328349-23328368 None:intergenic 65.0%
TGCTTACTGGCCCACTGGCC+CGG + chr8.2:23328925-23328944 MS.gene72930:intron 65.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 23327953 23331154 23327953 ID=MS.gene72930
chr8.2 mRNA 23327953 23331154 23327953 ID=MS.gene72930.t1;Parent=MS.gene72930
chr8.2 exon 23327953 23328603 23327953 ID=MS.gene72930.t1.exon1;Parent=MS.gene72930.t1
chr8.2 CDS 23327953 23328603 23327953 ID=cds.MS.gene72930.t1;Parent=MS.gene72930.t1
chr8.2 exon 23329023 23329233 23329023 ID=MS.gene72930.t1.exon2;Parent=MS.gene72930.t1
chr8.2 CDS 23329023 23329233 23329023 ID=cds.MS.gene72930.t1;Parent=MS.gene72930.t1
chr8.2 exon 23329410 23329692 23329410 ID=MS.gene72930.t1.exon3;Parent=MS.gene72930.t1
chr8.2 CDS 23329410 23329692 23329410 ID=cds.MS.gene72930.t1;Parent=MS.gene72930.t1
chr8.2 exon 23329853 23330239 23329853 ID=MS.gene72930.t1.exon4;Parent=MS.gene72930.t1
chr8.2 CDS 23329853 23330239 23329853 ID=cds.MS.gene72930.t1;Parent=MS.gene72930.t1
chr8.2 exon 23330395 23330472 23330395 ID=MS.gene72930.t1.exon5;Parent=MS.gene72930.t1
chr8.2 CDS 23330395 23330472 23330395 ID=cds.MS.gene72930.t1;Parent=MS.gene72930.t1
chr8.2 exon 23330923 23331154 23330923 ID=MS.gene72930.t1.exon6;Parent=MS.gene72930.t1
chr8.2 CDS 23330923 23331154 23330923 ID=cds.MS.gene72930.t1;Parent=MS.gene72930.t1
Gene Sequence

>MS.gene72930

ATGGGTTCTAAAAATGCCTTACCGGGCAACAGAGCACGAAGGCCTTTGTCAATTTTCGCTGTGCTTGCTCTGTGTTGTTTGTTTTATCTTTTGGGAACATGGCAAAGCAGTGGTTCCGGAAAGGGAGACAGCCTTGCATTGAAGGTAAATAAGATGCAGGCAACAACAGACTGCAACATTGTACCGAATTTGAATTTTGAACCCCAACACAAATATGTAGAAATTGTTGAGCAATCCGAACCGAAAGCTAAAATGTTCAAGGCATGTGATGTAAAATATACTGATTATACACCTTGCCAAGAGCAAGACCGAGCAATGACATTCCCTAGAGAAAACATGATCTATAGGGAAAGGCATTGTCCACCTCAAGAGGAAAAATTGCGTTGCCTCATTCCTGCTCCCGAAGGGTACACGACTCCTTTTCCATGGCCTAAAAGCCGTGATTATGCCTACTATGCTAATGTTCCTTACAAGCATCTGACAGTGGAGAAGGCTAATCAAAACTGGGTGAAATTTGAAGGGAATGTGTTCAAATTTCCAGGTGGAGGAACCATGTTCCCTCAAGGAGCCGATGCGTATATTGATGAGCTTGCATCGGTTATTCCAATCAAAGATGGTACTGTCAGAACAGCATTGGACACTGGTTGCGGGGTAAGCTTTCATGTCAAATAATCCTTTTGATATAGTATGTTATTTTTCTTTGTTGAGAAATATTTCATCACACAAATTTGACATCAAATTTGATGGTTACTATTCAGATGTGTGGTTAATTACGTTTAGTTGATGATTAATGAATATAACAAGGTGTAGCAACTCATTAACCATCCACTGAGCACAATTAACCACAATTTTCAAATGTGTTTAATTATGTGTAATGTATAATGGGGTTTTGTCTATTGGATTCCAAATTTCTCAATTTTCAGTGTATTTAGTATACTGAAGTCGGAATCATTTGTCCTTTCTTTGTTTTAATGCTTACTGGCCCACTGGCCCGGTTTACTTCCTTTCAGTATGCACCTTTCAATTGCTTCTTGATTGTTGTAGCAATATAAGCGTGAATGATTATGCAGGTTGCGAGTTGGGGAGCGTACTTGCTAAAGAGAAATGTGCTAGCTATGTCATTTGCTCCGAAGGATAACCATGAAGCACAAGTTCAGTTTGCATTGGAACGAGGGGTACCTGCTATTATTGGTGTTCTTGGTTCGATCCGTCTTCCATTCCCATCACGAGCCTTTGATATGTCTCAGTGTTCTCGTTGTCTAATACCATGGGCTGAAAATGGTTAGTGCTAAATTAGACAGTCAATAAGATTGATCTAGAATACAGTATTATCGGCATTTTCTTATGCCGATGATGATATTCCTTAACTTCTAAATATAATCATGCAAATGTTAATAATTCTGAAAATCTGAATGCAACATTGTTTAGTTGATTTTTCACCCAATAATTGAATGCAGAGGGCATGTATCTAATGGAAGTTGATCGAGTTTTAAGGCCTGGTGGATTTTGGATTTTATCTGGCCCTCCAATTAATTGGAAAACGTACTACCAAACATGGAAGCGAACGAAGGAGGATCTGAAGGCAGAGCAGAAAAAAATCGAGGATCTAGCCGAAAGTCTTTGCTGGGAAAAGAAGTATGAAAAGGGCGATATCGCTATCTGGAGGAAGAAAATAAATGCTAAATCATGTCAAAGAAAATCTCCCAATTTATGTGATTTAGATAATGCTGATGATGTTTGGTAAGCCCTGATCATTTCTACACACTTCATTTTACAAGTATAATGATTCATTTGTTGTTAGAGAGATTTGAATAATTATTTGTTCATATAATTCCACGATTTCGGATTATAATGCGCTCACGAATAACTTTTCTCCATGCTCCAAAATTTGTAATGGTAGGTACAAAAAAATGGAGGTCTGCAAAACCCCTATCCCCGAGGTAACCAGCCAAAGTGAAGTTGCCGGAGGAGAATTGAAGAAGTTTCCTGCTAGGCTGTTTGCAGTCCCTCCTAGAATAGCTAAAGACGTTATTCCAGGCGTAACAGTTGATTCTTATCAAGAGGACAACAAATTATGGAAAAAGCGTGTTAATAATTACAAAAGAATTAATAGATTGATCGGCACCACTAGATATCGGAATGTAATGGACATGAATGCAGGCCTTGGAGGATTTGCAGCTGCACTTGAATCACAAAAATCTTGGGTGATGAATGCTGTGCCCACAATTGCTGACAACACTTTAGGTGTTATCTATGAAAGAGGTCTCATTGGTATTTATCATGACTGGTAAGTTTCTAAAATTATCTTCATTAAGTTTTCTAATTTTATGATGATTCCCTTGCAAGTCAGCTTCCTATACTCTAAAATGATTAATTAAACTGATATTTATGGATATTTTGTTATGGTATGAAATTGCAATGACATTCGTTTTCTTTCTTCAGGTGTGAAGGCTTTTCTACATATCCAAGGACATATGATCTTATTCATGCCAATGGTTTATTTAGTTTGTACCAGGACAAGTAAGTTTCTTCCTTTTCCATCCACAAGTGATCATAGTGATAATTGGTAATTTGAAATTATAACTATATCAAGTCTTTTACTTACCAAAAATAAAATATTACTATTTTTACTGATTTTTCCAATTCTGGTATAATTGAGACTATAATTTGTTTGCCCCACATTTGATAAGATTAGACCTGAAAATATGTTTATAAGTGGTAGACAATCCTCACCTTACAAGCTGATTTTGTAAGAGTTAAGTTAAAGCTCGACCTAAATTTTAAGATGGTATCAAAGTCTATTCAAGATTTCATTGGATCACCCACCATTAGGTCTCCTGCTATCGGACCAGTTGGCTCAGGCTTCCAGTCCTAATCTAACCCGAATTCTAGGAAAAAAAACAGAGAACTTCAACATGTGATTATAATTCTGACTTAATTTAACATAAGTATTGTTGATTTGATTGACAGGTGCAACCTAGAAGACATCCTTTTAGAGATGGACCGCATATTAAGGCCAGAAGGATCGGTCATAATCCGCGACGAAGTTGATGTGATTAACAAGGTTCAGAAAATTGTTAGGGGAATGAGATGGGAATCTAAAATGGTGGATCATGAGGATGGCCCATTTGCACCCGAGAAGATATTGGTTATTGTAAAAGAGTATTGGGTTGGCAGCAGTAAAAACAACACATCCAGTTAG

Protein sequence

>MS.gene72930.t1

MGSKNALPGNRARRPLSIFAVLALCCLFYLLGTWQSSGSGKGDSLALKVNKMQATTDCNIVPNLNFEPQHKYVEIVEQSEPKAKMFKACDVKYTDYTPCQEQDRAMTFPRENMIYRERHCPPQEEKLRCLIPAPEGYTTPFPWPKSRDYAYYANVPYKHLTVEKANQNWVKFEGNVFKFPGGGTMFPQGADAYIDELASVIPIKDGTVRTALDTGCGVASWGAYLLKRNVLAMSFAPKDNHEAQVQFALERGVPAIIGVLGSIRLPFPSRAFDMSQCSRCLIPWAENEGMYLMEVDRVLRPGGFWILSGPPINWKTYYQTWKRTKEDLKAEQKKIEDLAESLCWEKKYEKGDIAIWRKKINAKSCQRKSPNLCDLDNADDVWYKKMEVCKTPIPEVTSQSEVAGGELKKFPARLFAVPPRIAKDVIPGVTVDSYQEDNKLWKKRVNNYKRINRLIGTTRYRNVMDMNAGLGGFAAALESQKSWVMNAVPTIADNTLGVIYERGLIGIYHDWCEGFSTYPRTYDLIHANGLFSLYQDKCNLEDILLEMDRILRPEGSVIIRDEVDVINKVQKIVRGMRWESKMVDHEDGPFAPEKILVIVKEYWVGSSKNNTSS