AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene011628

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene011628.t1 MTR_4g098890 98.646 517 7 0 1 517 85 601 0.0 1081
MS.gene011628.t1 MTR_8g055840 71.723 534 139 4 1 529 83 609 0.0 835
MS.gene011628.t1 MTR_5g040360 69.663 534 149 4 1 529 83 608 0.0 813
MS.gene011628.t1 MTR_3g040370 67.232 531 162 4 2 529 85 606 0.0 772
MS.gene011628.t1 MTR_8g100075 61.351 533 199 3 2 528 98 629 0.0 722
MS.gene011628.t1 MTR_0019s0120 61.582 531 200 3 2 528 105 635 0.0 718
MS.gene011628.t1 MTR_7g076170 62.286 525 191 3 4 521 103 627 0.0 711
MS.gene011628.t1 MTR_1g101370 61.860 527 193 4 2 520 92 618 0.0 702
MS.gene011628.t1 MTR_8g432680 59.810 525 203 3 5 521 108 632 0.0 688
MS.gene011628.t1 MTR_7g006060 53.053 524 235 4 2 514 43 566 0.0 593
MS.gene011628.t1 MTR_0019s0120 60.698 430 165 3 2 427 105 534 0.0 572
MS.gene011628.t1 MTR_8g071280 47.932 532 264 6 2 526 70 595 3.41e-179 517
MS.gene011628.t1 MTR_5g026930 47.834 531 266 7 2 526 72 597 3.77e-172 499
MS.gene011628.t1 MTR_7g076150 47.212 538 239 12 2 519 75 587 3.95e-166 483
MS.gene011628.t1 MTR_8g432620 44.841 533 263 8 1 520 87 601 9.09e-166 483
MS.gene011628.t1 MTR_5g080720 43.126 531 268 12 2 516 125 637 2.01e-151 448
MS.gene011628.t1 MTR_1g442840 42.144 541 279 11 2 522 92 618 1.79e-149 442
MS.gene011628.t1 MTR_1g442840 43.725 510 257 10 29 522 10 505 4.50e-148 435
MS.gene011628.t1 MTR_1g075900 41.959 541 280 11 2 522 91 617 2.75e-146 434
MS.gene011628.t1 MTR_3g068990 43.100 529 273 12 2 517 153 666 6.26e-145 432
MS.gene011628.t1 MTR_1g069785 40.550 545 290 11 4 528 64 594 1.22e-144 429
MS.gene011628.t1 MTR_1g029730 44.030 536 263 14 2 518 141 658 3.13e-144 430
MS.gene011628.t1 MTR_7g076150 47.974 469 199 12 71 519 1 444 8.00e-144 421
MS.gene011628.t1 MTR_3g096480 44.981 538 257 16 2 519 258 776 9.13e-142 428
MS.gene011628.t1 MTR_5g026930 48.611 432 212 6 2 427 72 499 1.23e-139 413
MS.gene011628.t1 MTR_8g093880 42.486 539 269 15 2 519 288 806 1.80e-135 412
MS.gene011628.t1 MTR_8g076650 43.870 522 263 14 5 510 380 887 6.47e-134 410
MS.gene011628.t1 MTR_1g051055 41.078 538 271 12 5 519 89 603 2.06e-133 400
MS.gene011628.t1 MTR_5g083150 39.811 530 282 14 10 526 100 605 6.53e-132 397
MS.gene011628.t1 MTR_5g021100 41.714 525 271 14 5 510 322 830 3.29e-130 399
MS.gene011628.t1 MTR_5g080720 43.100 471 234 12 2 456 125 577 4.49e-130 391
MS.gene011628.t1 MTR_3g088790 39.405 538 288 15 2 519 223 742 4.42e-124 381
MS.gene011628.t1 MTR_3g071530 39.400 500 274 12 7 495 149 630 6.55e-123 375
MS.gene011628.t1 MTR_1g022255 35.581 534 295 15 2 519 199 699 6.49e-97 309
MS.gene011628.t1 MTR_3g074780 32.428 552 316 17 5 519 157 688 2.60e-91 294
MS.gene011628.t1 MTR_4g083030 32.299 548 304 13 5 518 89 603 2.78e-90 289
MS.gene011628.t1 MTR_5g064080 32.188 553 312 18 2 519 146 670 7.71e-89 287
MS.gene011628.t1 MTR_1g022255 30.846 402 234 13 2 388 199 571 5.00e-47 173
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene011628.t1 AT4G18030 78.544 522 111 1 2 522 85 606 0.0 884
MS.gene011628.t1 AT1G26850 72.264 530 142 2 2 526 86 615 0.0 839
MS.gene011628.t1 AT1G26850 72.264 530 142 2 2 526 86 615 0.0 839
MS.gene011628.t1 AT4G10440 62.264 530 194 2 2 525 93 622 0.0 731
MS.gene011628.t1 AT1G33170 61.437 529 197 3 2 523 110 638 0.0 714
MS.gene011628.t1 AT4G00750 59.363 534 208 4 4 528 98 631 0.0 691
MS.gene011628.t1 AT2G45750 58.195 543 212 6 2 529 87 629 0.0 675
MS.gene011628.t1 AT1G26850 72.010 418 112 2 2 414 86 503 0.0 653
MS.gene011628.t1 AT2G43200 51.731 520 240 5 2 514 91 606 0.0 562
MS.gene011628.t1 AT2G43200 51.731 520 240 5 2 514 91 606 0.0 562
MS.gene011628.t1 AT1G31850 48.224 535 260 7 2 526 76 603 0.0 533
MS.gene011628.t1 AT1G31850 48.224 535 260 7 2 526 76 603 0.0 533
MS.gene011628.t1 AT1G31850 48.224 535 260 7 2 526 76 603 0.0 533
MS.gene011628.t1 AT1G31850 48.224 535 260 7 2 526 76 603 0.0 533
MS.gene011628.t1 AT4G19120 45.438 537 278 6 2 529 70 600 1.62e-178 516
MS.gene011628.t1 AT4G19120 45.438 537 278 6 2 529 70 600 1.62e-178 516
MS.gene011628.t1 AT4G00740 45.627 526 259 8 5 519 84 593 1.22e-162 475
MS.gene011628.t1 AT4G00740 45.627 526 259 8 5 519 84 593 1.22e-162 475
MS.gene011628.t1 AT5G06050 43.068 541 258 14 2 518 149 663 4.56e-147 438
MS.gene011628.t1 AT4G19120 46.897 435 217 5 2 427 70 499 3.86e-146 429
MS.gene011628.t1 AT1G04430 41.133 547 282 11 2 522 84 616 9.80e-145 430
MS.gene011628.t1 AT1G04430 41.133 547 282 11 2 522 84 616 9.80e-145 430
MS.gene011628.t1 AT1G04430 41.133 547 282 11 2 522 84 616 9.80e-145 430
MS.gene011628.t1 AT4G14360 42.857 511 261 10 2 495 76 572 9.97e-145 429
MS.gene011628.t1 AT4G14360 42.857 511 261 10 2 495 76 572 9.97e-145 429
MS.gene011628.t1 AT2G39750 42.214 533 270 11 2 516 177 689 3.59e-144 431
MS.gene011628.t1 AT3G23300 40.741 540 287 11 2 522 79 604 2.05e-143 426
MS.gene011628.t1 AT3G23300 40.741 540 287 11 2 522 79 604 2.05e-143 426
MS.gene011628.t1 AT1G77260 43.097 536 259 15 2 516 143 653 2.83e-143 427
MS.gene011628.t1 AT1G29470 44.238 538 260 16 2 519 240 757 1.43e-139 422
MS.gene011628.t1 AT1G29470 44.238 538 260 16 2 519 240 757 1.43e-139 422
MS.gene011628.t1 AT2G34300 42.937 538 267 15 2 519 240 757 3.05e-136 413
MS.gene011628.t1 AT2G34300 42.937 538 267 15 2 519 240 757 3.05e-136 413
MS.gene011628.t1 AT2G34300 42.937 538 267 15 2 519 240 757 3.05e-136 413
MS.gene011628.t1 AT5G04060 39.962 533 283 10 4 519 85 597 7.01e-136 407
MS.gene011628.t1 AT3G56080 42.032 502 257 12 11 498 114 595 6.76e-135 404
MS.gene011628.t1 AT5G14430 41.341 537 278 13 5 519 83 604 1.20e-134 404
MS.gene011628.t1 AT3G10200 40.713 533 285 10 2 519 72 588 2.61e-134 402
MS.gene011628.t1 AT5G64030 42.694 527 266 15 11 519 308 816 1.72e-133 407
MS.gene011628.t1 AT5G14430 40.968 537 280 13 5 519 83 604 8.02e-133 399
MS.gene011628.t1 AT3G51070 42.453 530 265 14 10 519 380 889 4.34e-130 400
MS.gene011628.t1 AT2G40280 40.421 522 270 13 10 519 89 581 1.98e-128 387
MS.gene011628.t1 AT3G10200 40.237 507 271 10 2 492 72 562 3.52e-126 382
MS.gene011628.t1 AT3G56080 43.142 452 223 12 11 448 114 545 8.10e-120 363
MS.gene011628.t1 AT3G51070 43.982 457 224 12 10 448 380 822 1.88e-112 353
MS.gene011628.t1 AT1G19430 35.514 535 295 16 2 519 221 722 6.34e-95 304
MS.gene011628.t1 AT1G19430 35.514 535 295 16 2 519 221 722 6.34e-95 304
MS.gene011628.t1 AT1G13860 32.123 551 305 13 2 516 81 598 4.14e-90 288
MS.gene011628.t1 AT1G13860 32.123 551 305 13 2 516 81 598 4.14e-90 288
MS.gene011628.t1 AT1G13860 32.123 551 305 13 2 516 81 598 4.14e-90 288
MS.gene011628.t1 AT1G13860 32.123 551 305 13 2 516 81 598 4.14e-90 288
MS.gene011628.t1 AT1G78240 32.609 552 318 16 2 518 146 678 1.27e-89 289
MS.gene011628.t1 AT1G78240 32.609 552 318 16 2 518 146 678 1.27e-89 289
MS.gene011628.t1 AT2G03480 31.694 549 301 13 2 518 86 592 7.55e-87 280
MS.gene011628.t1 AT2G03480 32.482 548 309 14 2 518 86 603 2.41e-85 276
MS.gene011628.t1 AT1G13860 33.550 462 252 11 88 516 3 442 1.48e-80 259
MS.gene011628.t1 AT1G19430 31.920 401 215 12 11 389 231 595 1.54e-48 177
MS.gene011628.t1 AT2G03480 30.142 282 183 3 2 274 86 362 2.85e-41 154

Find 144 sgRNAs with CRISPR-Local

Find 245 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTATCTAAATCACATAAAT+TGG 0.157551 8.1:-23708606 None:intergenic
CCTGCTATTATTGGTGTTCT+TGG 0.181876 8.1:+23708081 MS.gene011628:CDS
TATCTGGCCCTCCAATTAAT+TGG 0.198353 8.1:+23708417 MS.gene011628:CDS
ATCAAGAGGACAACAAATTA+TGG 0.295703 8.1:+23708958 MS.gene011628:CDS
ACAAGGTTCAGAAAATTGTT+AGG 0.303090 8.1:+23709954 MS.gene011628:CDS
TAGAGATGGACCGCATATTA+AGG 0.304977 8.1:+23709888 MS.gene011628:CDS
CTAATACCATGGGCTGAAAA+TGG 0.306663 8.1:+23708162 MS.gene011628:CDS
TCTCTAAAAGGATGTCTTCT+AGG 0.313204 8.1:-23709871 None:intergenic
CAAACTGAACTTGTGCTTCA+TGG 0.317331 8.1:-23708041 None:intergenic
GGCTGGTTACCTCGGGGATA+GGG 0.326072 8.1:-23708830 None:intergenic
CCTTCGTTCGCTTCCATGTT+TGG 0.326669 8.1:-23708451 None:intergenic
ATATGCGGTCCATCTCTAAA+AGG 0.333621 8.1:-23709883 None:intergenic
CTAGAGAAAACATGATCTAT+AGG 0.334371 8.1:+23707228 MS.gene011628:CDS
TGGAGAAGGCTAATCAAAAC+TGG 0.334883 8.1:+23707387 MS.gene011628:CDS
CGAGGGGTACCTGCTATTAT+TGG 0.338287 8.1:+23708072 MS.gene011628:CDS
ATAACGTCTTTAGCTATTCT+AGG 0.339212 8.1:-23708912 None:intergenic
TACAATAACCAATATCTTCT+CGG 0.340229 8.1:-23710029 None:intergenic
GATTATGCAGGTTGCGAGTT+GGG 0.346051 8.1:+23707963 MS.gene011628:intron
ACAATTGCTGACAACACTTT+AGG 0.348076 8.1:+23709125 MS.gene011628:CDS
GGTTATTGTAAAAGAGTATT+GGG 0.355588 8.1:+23710042 MS.gene011628:CDS
ATTTGCACCCGAGAAGATAT+TGG 0.359714 8.1:+23710021 MS.gene011628:CDS
AATGAGATGGGAATCTAAAA+TGG 0.360431 8.1:+23709979 MS.gene011628:CDS
CGGATTATGACCGATCCTTC+TGG 0.383497 8.1:-23709911 None:intergenic
GGGAATGTGTTCAAATTTCC+AGG 0.385082 8.1:+23707422 MS.gene011628:CDS
TAGAGAAAACATGATCTATA+GGG 0.387569 8.1:+23707229 MS.gene011628:CDS
AATATCTTCTCGGGTGCAAA+TGG 0.387847 8.1:-23710019 None:intergenic
CAAGGTTCAGAAAATTGTTA+GGG 0.396641 8.1:+23709955 MS.gene011628:CDS
TCCGGCAACTTCACTTTGGC+TGG 0.396919 8.1:-23708847 None:intergenic
TGGCTGGTTACCTCGGGGAT+AGG 0.400033 8.1:-23708831 None:intergenic
ATAGCTAAAGACGTTATTCC+AGG 0.406709 8.1:+23708918 MS.gene011628:CDS
TCACTTTGGCTGGTTACCTC+GGG 0.406855 8.1:-23708837 None:intergenic
AAAGGAGTCGTGTACCCTTC+GGG 0.407789 8.1:-23707302 None:intergenic
CTGACAGTACCATCTTTGAT+TGG 0.409983 8.1:-23707506 None:intergenic
AAAAGGGCGATATCGCTATC+TGG 0.411310 8.1:+23708543 MS.gene011628:CDS
TAGATAATGCTGATGATGTT+TGG 0.414758 8.1:+23708621 MS.gene011628:CDS
GTTCTCGTTGTCTAATACCA+TGG 0.415422 8.1:+23708151 MS.gene011628:CDS
ATCTAGCCGAAAGTCTTTGC+TGG 0.428753 8.1:+23708507 MS.gene011628:CDS
CTCTAGGGAATGTCATTGCT+CGG 0.429428 8.1:-23707211 None:intergenic
CAGCATTGGACACTGGTTGC+GGG 0.430729 8.1:+23707531 MS.gene011628:CDS
TCCACTGTCAGATGCTTGTA+AGG 0.431312 8.1:-23707368 None:intergenic
CAAAACTGGGTGAAATTTGA+AGG 0.440422 8.1:+23707401 MS.gene011628:CDS
TCATTGCTCGGTCTTGCTCT+TGG 0.442210 8.1:-23707199 None:intergenic
TGTGCTTCATGGTTATCCTT+CGG 0.442466 8.1:-23708030 None:intergenic
GTAAGGAACATTAGCATAGT+AGG 0.443219 8.1:-23707351 None:intergenic
TAAAGTGTTGTCAGCAATTG+TGG 0.446000 8.1:-23709123 None:intergenic
GTCGTGTACCCTTCGGGAGC+AGG 0.448795 8.1:-23707296 None:intergenic
AAAAGGAGTCGTGTACCCTT+CGG 0.449355 8.1:-23707303 None:intergenic
TGGTTATTGTAAAAGAGTAT+TGG 0.449942 8.1:+23710041 MS.gene011628:CDS
TTCACTTTGGCTGGTTACCT+CGG 0.450057 8.1:-23708838 None:intergenic
ACCGAAAGCTAAAATGTTCA+AGG 0.457641 8.1:+23707142 None:intergenic
ACAATAACCAATATCTTCTC+GGG 0.458082 8.1:-23710028 None:intergenic
CTCCTCCGGCAACTTCACTT+TGG 0.458578 8.1:-23708851 None:intergenic
ATCTATGAAAGAGGTCTCAT+TGG 0.460262 8.1:+23709152 MS.gene011628:CDS
TGCAGAGGGCATGTATCTAA+TGG 0.460772 8.1:+23708355 MS.gene011628:intron
ATGGACATGAATGCAGGCCT+TGG 0.463464 8.1:+23709047 MS.gene011628:CDS
TTAGGTGTTATCTATGAAAG+AGG 0.473905 8.1:+23709143 MS.gene011628:CDS
ACCAGCCAAAGTGAAGTTGC+CGG 0.483225 8.1:+23708846 MS.gene011628:CDS
GGGACTGCAAACAGCCTAGC+AGG 0.484901 8.1:-23708888 None:intergenic
GACATGAATGCAGGCCTTGG+AGG 0.485877 8.1:+23709050 MS.gene011628:CDS
TGATCGGCACCACTAGATAT+CGG 0.486791 8.1:+23709018 MS.gene011628:CDS
AGCACAAGTTCAGTTTGCAT+TGG 0.488386 8.1:+23708047 MS.gene011628:CDS
CTGGGAAAAGAAGTATGAAA+AGG 0.490567 8.1:+23708526 MS.gene011628:CDS
TCATTGGTATTTATCATGAC+TGG 0.490759 8.1:+23709168 MS.gene011628:CDS
AAACTTCTTCAATTCTCCTC+CGG 0.491193 8.1:-23708865 None:intergenic
TATACGCATCGGCTCCTTGA+GGG 0.491733 8.1:-23707460 None:intergenic
GGGAACATGGTTCCTCCACC+TGG 0.492570 8.1:-23707440 None:intergenic
TATGATCTTATTCATGCCAA+TGG 0.492874 8.1:+23709376 MS.gene011628:CDS
ATTGTAAAAGAGTATTGGGT+TGG 0.493911 8.1:+23710046 MS.gene011628:CDS
TTATCTAAATCACATAAATT+GGG 0.494725 8.1:-23708605 None:intergenic
TGAATAAGATCATATGTCCT+TGG 0.500320 8.1:-23709367 None:intergenic
ACAGCATTGGACACTGGTTG+CGG 0.504094 8.1:+23707530 MS.gene011628:CDS
AAAAGAATTAATAGATTGAT+CGG 0.507870 8.1:+23709002 MS.gene011628:CDS
TGCCTCATTCCTGCTCCCGA+AGG 0.510952 8.1:+23707287 MS.gene011628:CDS
AGGAAGAAACTTACTTGTCC+TGG 0.512195 8.1:-23709414 None:intergenic
AGCTATGTCATTTGCTCCGA+AGG 0.512623 8.1:+23708014 MS.gene011628:CDS
AATTGTTAGGGGAATGAGAT+GGG 0.515509 8.1:+23709967 MS.gene011628:CDS
AACAGTTGATTCTTATCAAG+AGG 0.515523 8.1:+23708944 MS.gene011628:CDS
GCTCGGTCTTGCTCTTGGCA+AGG 0.517894 8.1:-23707194 None:intergenic
GTGTTCAAATTTCCAGGTGG+AGG 0.519025 8.1:+23707428 MS.gene011628:CDS
TAAGAATCAACTGTTACGCC+TGG 0.523031 8.1:-23708936 None:intergenic
CAAGCATCTGACAGTGGAGA+AGG 0.525351 8.1:+23707373 MS.gene011628:CDS
TCAAAGGCTCGTGATGGGAA+TGG 0.531393 8.1:-23708117 None:intergenic
GTACAAACTAAATAAACCAT+TGG 0.532852 8.1:-23709392 None:intergenic
ATTATGCAGGTTGCGAGTTG+GGG 0.534569 8.1:+23707964 MS.gene011628:intron
CACTAGATATCGGAATGTAA+TGG 0.536983 8.1:+23709028 MS.gene011628:CDS
GCTGGTTACCTCGGGGATAG+GGG 0.539426 8.1:-23708829 None:intergenic
TTCTCGTTGTCTAATACCAT+GGG 0.539833 8.1:+23708152 MS.gene011628:CDS
GACATATCAAAGGCTCGTGA+TGG 0.541258 8.1:-23708123 None:intergenic
ATCTAAAATGGTGGATCATG+AGG 0.541586 8.1:+23709991 MS.gene011628:CDS
TGGTTTATTTAGTTTGTACC+AGG 0.546436 8.1:+23709396 MS.gene011628:CDS
ATATCTTCTCGGGTGCAAAT+GGG 0.548383 8.1:-23710018 None:intergenic
GCCTCATTCCTGCTCCCGAA+GGG 0.551559 8.1:+23707288 MS.gene011628:CDS
ACCCTTCGGGAGCAGGAATG+AGG 0.552400 8.1:-23707289 None:intergenic
CATATTAAGGCCAGAAGGAT+CGG 0.556558 8.1:+23709901 MS.gene011628:CDS
TTCAGTTTGCATTGGAACGA+GGG 0.556579 8.1:+23708055 MS.gene011628:CDS
AAAACATGATCTATAGGGAA+AGG 0.562202 8.1:+23707234 MS.gene011628:CDS
AATTGAAGAAGTTTCCTGCT+AGG 0.562951 8.1:+23708874 MS.gene011628:CDS
TGATTATGCAGGTTGCGAGT+TGG 0.564155 8.1:+23707962 MS.gene011628:intron
TCGGTTATTCCAATCAAAGA+TGG 0.565140 8.1:+23707497 MS.gene011628:CDS
GCGAACGAAGGAGGATCTGA+AGG 0.569849 8.1:+23708463 MS.gene011628:CDS
CGTCTTTAGCTATTCTAGGA+GGG 0.573557 8.1:-23708908 None:intergenic
CCAAGAACACCAATAATAGC+AGG 0.574717 8.1:-23708081 None:intergenic
AATGTAATGGACATGAATGC+AGG 0.577859 8.1:+23709041 MS.gene011628:CDS
ATCCTTCTGGCCTTAATATG+CGG 0.578717 8.1:-23709898 None:intergenic
TGGGAAAAGAAGTATGAAAA+GGG 0.579153 8.1:+23708527 MS.gene011628:CDS
ATCGGCTCCTTGAGGGAACA+TGG 0.579987 8.1:-23707453 None:intergenic
AAGGCATTGTCCACCTCAAG+AGG 0.580231 8.1:+23707253 MS.gene011628:CDS
ACGTCTTTAGCTATTCTAGG+AGG 0.584489 8.1:-23708909 None:intergenic
ACATATCAAAGGCTCGTGAT+GGG 0.586233 8.1:-23708122 None:intergenic
TCTAGCCGAAAGTCTTTGCT+GGG 0.586847 8.1:+23708508 MS.gene011628:CDS
CATTACATTCCGATATCTAG+TGG 0.587708 8.1:-23709027 None:intergenic
GTTCAGTTTGCATTGGAACG+AGG 0.591548 8.1:+23708054 MS.gene011628:CDS
TGGTACTGTCAGAACAGCAT+TGG 0.594187 8.1:+23707517 MS.gene011628:CDS
CTCGTGATGGGAATGGAAGA+CGG 0.594874 8.1:-23708110 None:intergenic
CGAAGTTGATGTGATTAACA+AGG 0.596587 8.1:+23709937 MS.gene011628:CDS
GTGCAGCTGCAAATCCTCCA+AGG 0.600414 8.1:-23709064 None:intergenic
GGAAAACGTACTACCAAACA+TGG 0.600730 8.1:+23708438 MS.gene011628:CDS
AAAACTGGGTGAAATTTGAA+GGG 0.602703 8.1:+23707402 MS.gene011628:CDS
AGCATTGGACACTGGTTGCG+GGG 0.605572 8.1:+23707532 MS.gene011628:CDS
AAAGTGTTGTCAGCAATTGT+GGG 0.608729 8.1:-23709122 None:intergenic
AAATTGTTAGGGGAATGAGA+TGG 0.612828 8.1:+23709966 MS.gene011628:CDS
GAGATGGGAATCTAAAATGG+TGG 0.616902 8.1:+23709982 MS.gene011628:CDS
GTCAGAACAGCATTGGACAC+TGG 0.619837 8.1:+23707524 MS.gene011628:CDS
AAGCTCATCAATATACGCAT+CGG 0.620380 8.1:-23707471 None:intergenic
AACATGGAAGCGAACGAAGG+AGG 0.623111 8.1:+23708454 MS.gene011628:CDS
AAAATGGTGGATCATGAGGA+TGG 0.624067 8.1:+23709995 MS.gene011628:CDS
GGAGGAACCATGTTCCCTCA+AGG 0.625347 8.1:+23707446 MS.gene011628:CDS
CACTTTGGCTGGTTACCTCG+GGG 0.630898 8.1:-23708836 None:intergenic
GTATATTGATGAGCTTGCAT+CGG 0.639331 8.1:+23707478 MS.gene011628:CDS
ATATACGCATCGGCTCCTTG+AGG 0.645967 8.1:-23707461 None:intergenic
GACCGCATATTAAGGCCAGA+AGG 0.646017 8.1:+23709896 MS.gene011628:CDS
GGAGAAGGCTAATCAAAACT+GGG 0.651414 8.1:+23707388 MS.gene011628:CDS
CCAAACATGGAAGCGAACGA+AGG 0.652207 8.1:+23708451 MS.gene011628:CDS
TAGCATAGTAGGCATAATCA+CGG 0.653977 8.1:-23707340 None:intergenic
GATAAAATCCAAAATCCACC+AGG 0.658663 8.1:-23708398 None:intergenic
TCAGTTTGCATTGGAACGAG+GGG 0.665623 8.1:+23708056 MS.gene011628:CDS
AAGGTTCAGAAAATTGTTAG+GGG 0.677847 8.1:+23709956 MS.gene011628:CDS
TCCTTACAAGCATCTGACAG+TGG 0.686028 8.1:+23707367 MS.gene011628:CDS
AGCCAAAGTGAAGTTGCCGG+AGG 0.689567 8.1:+23708849 MS.gene011628:CDS
AGAACACTGAGACATATCAA+AGG 0.695313 8.1:-23708133 None:intergenic
AGGGCGATATCGCTATCTGG+AGG 0.701556 8.1:+23708546 MS.gene011628:CDS
TAATCACATCAACTTCGTCG+CGG 0.731217 8.1:-23709931 None:intergenic
AATGTGTTCAAATTTCCAGG+TGG 0.732268 8.1:+23707425 MS.gene011628:CDS
CTGCAAAACCCCTATCCCCG+AGG 0.738570 8.1:+23708821 MS.gene011628:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATTAAACTGATATTTA+TGG + chr8.1:23709272-23709291 MS.gene011628:intron 10.0%
!! AAAAGAATTAATAGATTGAT+CGG + chr8.1:23709002-23709021 MS.gene011628:CDS 15.0%
!! AAATAACATACTATATCAAA+AGG - chr8.1:23707579-23707598 None:intergenic 15.0%
!! AATTATGTGTAATGTATAAT+GGG + chr8.1:23707766-23707785 MS.gene011628:intron 15.0%
!! ATGATTATATTTAGAAGTTA+AGG - chr8.1:23708267-23708286 None:intergenic 15.0%
!! ATTATCTAAATCACATAAAT+TGG - chr8.1:23708609-23708628 None:intergenic 15.0%
!! TAATTATGTGTAATGTATAA+TGG + chr8.1:23707765-23707784 MS.gene011628:intron 15.0%
!! TTATCTAAATCACATAAATT+GGG - chr8.1:23708608-23708627 None:intergenic 15.0%
!!! AATTAATCATTTTAGAGTAT+AGG - chr8.1:23709259-23709278 None:intergenic 15.0%
!!! TATTTATGGATATTTTGTTA+TGG + chr8.1:23709286-23709305 MS.gene011628:intron 15.0%
!! AAATTTGACATCAAATTTGA+TGG + chr8.1:23707627-23707646 MS.gene011628:intron 20.0%
!! ATTATGTGTAATGTATAATG+GGG + chr8.1:23707767-23707786 MS.gene011628:intron 20.0%
!! GATGATTAATGAATATAACA+AGG + chr8.1:23707685-23707704 MS.gene011628:intron 20.0%
!! TTAAACACATTTGAAAATTG+TGG - chr8.1:23707748-23707767 None:intergenic 20.0%
!! TTGATACCATCTTAAAATTT+AGG - chr8.1:23709678-23709697 None:intergenic 20.0%
!!! TTTTTTTTTCCTAGTAGATT+AGG - chr8.1:23709776-23709795 None:intergenic 20.0%
! AAGTCTATTCAAGATTTCAT+TGG + chr8.1:23709697-23709716 MS.gene011628:intron 25.0%
! ACACTGAAAATTGAGAAATT+TGG - chr8.1:23707809-23707828 None:intergenic 25.0%
! ACTTGAATCACAAAAATCTT+GGG + chr8.1:23709085-23709104 MS.gene011628:CDS 25.0%
! CCTGAAAATATGTTTATAAG+TGG + chr8.1:23709599-23709618 MS.gene011628:intron 25.0%
! GTAAGCATTAAAACAAAGAA+AGG - chr8.1:23707862-23707881 None:intergenic 25.0%
! GTACAAACTAAATAAACCAT+TGG - chr8.1:23709395-23709414 None:intergenic 25.0%
! TAATGGTAGGTACAAAAAAA+TGG + chr8.1:23708794-23708813 MS.gene011628:intron 25.0%
! TACAATAACCAATATCTTCT+CGG - chr8.1:23710032-23710051 None:intergenic 25.0%
! TAGAGAAAACATGATCTATA+GGG + chr8.1:23707229-23707248 MS.gene011628:CDS 25.0%
! TGTATTTAGTATACTGAAGT+CGG + chr8.1:23707826-23707845 MS.gene011628:intron 25.0%
! TTCATATAATTCCACGATTT+CGG + chr8.1:23708725-23708744 MS.gene011628:intron 25.0%
!! CCACTTATAAACATATTTTC+AGG - chr8.1:23709602-23709621 None:intergenic 25.0%
!! GATCTAGAATACAGTATTAT+CGG + chr8.1:23708215-23708234 MS.gene011628:intron 25.0%
!! TAGTACGTTTTCCAATTAAT+TGG - chr8.1:23708431-23708450 None:intergenic 25.0%
!! TATAGATCATGTTTTCTCTA+GGG - chr8.1:23707229-23707248 None:intergenic 25.0%
!! TGGTTATTGTAAAAGAGTAT+TGG + chr8.1:23710041-23710060 MS.gene011628:CDS 25.0%
!!! GGTTATTGTAAAAGAGTATT+GGG + chr8.1:23710042-23710061 MS.gene011628:CDS 25.0%
!!! TTCTTTGTTTTAATGCTTAC+TGG + chr8.1:23707862-23707881 MS.gene011628:intron 25.0%
!!! TTTACTGATTTTTCCAATTC+TGG + chr8.1:23709529-23709548 MS.gene011628:intron 25.0%
AAAACATGATCTATAGGGAA+AGG + chr8.1:23707234-23707253 MS.gene011628:CDS 30.0%
AAAACTGGGTGAAATTTGAA+GGG + chr8.1:23707402-23707421 MS.gene011628:CDS 30.0%
AAGGTTCAGAAAATTGTTAG+GGG + chr8.1:23709956-23709975 MS.gene011628:CDS 30.0%
AATGAGATGGGAATCTAAAA+TGG + chr8.1:23709979-23709998 MS.gene011628:CDS 30.0%
ACAAGGTTCAGAAAATTGTT+AGG + chr8.1:23709954-23709973 MS.gene011628:CDS 30.0%
ACAATAACCAATATCTTCTC+GGG - chr8.1:23710031-23710050 None:intergenic 30.0%
ACAATCAAGAAGCAATTGAA+AGG - chr8.1:23707922-23707941 None:intergenic 30.0%
AGGTCTAATCTTATCAAATG+TGG - chr8.1:23709582-23709601 None:intergenic 30.0%
AGTCTCAATTATACCAGAAT+TGG - chr8.1:23709545-23709564 None:intergenic 30.0%
ATAACGTCTTTAGCTATTCT+AGG - chr8.1:23708915-23708934 None:intergenic 30.0%
ATCAAGAGGACAACAAATTA+TGG + chr8.1:23708958-23708977 MS.gene011628:CDS 30.0%
ATTATCACTATGATCACTTG+TGG - chr8.1:23709447-23709466 None:intergenic 30.0%
CAAGGTTCAGAAAATTGTTA+GGG + chr8.1:23709955-23709974 MS.gene011628:CDS 30.0%
CAAGTGATCATAGTGATAAT+TGG + chr8.1:23709447-23709466 MS.gene011628:intron 30.0%
CACTTGAATCACAAAAATCT+TGG + chr8.1:23709084-23709103 MS.gene011628:CDS 30.0%
CTAGAGAAAACATGATCTAT+AGG + chr8.1:23707228-23707247 MS.gene011628:CDS 30.0%
GAAATGTGTAGAAATGATCA+GGG - chr8.1:23708651-23708670 None:intergenic 30.0%
GGTCTAATCTTATCAAATGT+GGG - chr8.1:23709581-23709600 None:intergenic 30.0%
GTCTAATCTTATCAAATGTG+GGG - chr8.1:23709580-23709599 None:intergenic 30.0%
TATGATCTTATTCATGCCAA+TGG + chr8.1:23709376-23709395 MS.gene011628:CDS 30.0%
TCATTGGTATTTATCATGAC+TGG + chr8.1:23709168-23709187 MS.gene011628:CDS 30.0%
TCTTACAAAATCAGCTTGTA+AGG - chr8.1:23709638-23709657 None:intergenic 30.0%
TGAAATGTGTAGAAATGATC+AGG - chr8.1:23708652-23708671 None:intergenic 30.0%
TGAATAAGATCATATGTCCT+TGG - chr8.1:23709370-23709389 None:intergenic 30.0%
! AACAGTTGATTCTTATCAAG+AGG + chr8.1:23708944-23708963 MS.gene011628:CDS 30.0%
! ACGTTTTCCAATTAATTGGA+GGG - chr8.1:23708427-23708446 None:intergenic 30.0%
! CTATAGATCATGTTTTCTCT+AGG - chr8.1:23707230-23707249 None:intergenic 30.0%
! GTACCTACCATTACAAATTT+TGG - chr8.1:23708787-23708806 None:intergenic 30.0%
! TACGTTTTCCAATTAATTGG+AGG - chr8.1:23708428-23708447 None:intergenic 30.0%
! TAGATAATGCTGATGATGTT+TGG + chr8.1:23708621-23708640 MS.gene011628:CDS 30.0%
! TGGGAAAAGAAGTATGAAAA+GGG + chr8.1:23708527-23708546 MS.gene011628:CDS 30.0%
! TTAGGTGTTATCTATGAAAG+AGG + chr8.1:23709143-23709162 MS.gene011628:CDS 30.0%
!! ATTGTAAAAGAGTATTGGGT+TGG + chr8.1:23710046-23710065 MS.gene011628:CDS 30.0%
!! GTATTGTTGATTTGATTGAC+AGG + chr8.1:23709843-23709862 MS.gene011628:intron 30.0%
!! TATAATGGGGTTTTGTCTAT+TGG + chr8.1:23707780-23707799 MS.gene011628:intron 30.0%
!! TGGTTTATTTAGTTTGTACC+AGG + chr8.1:23709396-23709415 MS.gene011628:CDS 30.0%
AAACTTCTTCAATTCTCCTC+CGG - chr8.1:23708868-23708887 None:intergenic 35.0%
AAATTGTTAGGGGAATGAGA+TGG + chr8.1:23709966-23709985 MS.gene011628:CDS 35.0%
AAGCTCATCAATATACGCAT+CGG - chr8.1:23707474-23707493 None:intergenic 35.0%
AATGTGTTCAAATTTCCAGG+TGG + chr8.1:23707425-23707444 MS.gene011628:CDS 35.0%
AATTGAAGAAGTTTCCTGCT+AGG + chr8.1:23708874-23708893 MS.gene011628:CDS 35.0%
AATTGTTAGGGGAATGAGAT+GGG + chr8.1:23709967-23709986 MS.gene011628:CDS 35.0%
ACAATTGCTGACAACACTTT+AGG + chr8.1:23709125-23709144 MS.gene011628:CDS 35.0%
ACCCAATAATTGAATGCAGA+GGG + chr8.1:23708341-23708360 MS.gene011628:intron 35.0%
AGAACACTGAGACATATCAA+AGG - chr8.1:23708136-23708155 None:intergenic 35.0%
ATAAGCGTGAATGATTATGC+AGG + chr8.1:23707951-23707970 MS.gene011628:intron 35.0%
ATACTGAAAGGAAGTAAACC+GGG - chr8.1:23707896-23707915 None:intergenic 35.0%
ATAGCTAAAGACGTTATTCC+AGG + chr8.1:23708918-23708937 MS.gene011628:CDS 35.0%
ATCTATGAAAGAGGTCTCAT+TGG + chr8.1:23709152-23709171 MS.gene011628:CDS 35.0%
ATGGTTACTATTCAGATGTG+TGG + chr8.1:23707646-23707665 MS.gene011628:intron 35.0%
CAAAACTGGGTGAAATTTGA+AGG + chr8.1:23707401-23707420 MS.gene011628:CDS 35.0%
CACTAGATATCGGAATGTAA+TGG + chr8.1:23709028-23709047 MS.gene011628:CDS 35.0%
CATACTGAAAGGAAGTAAAC+CGG - chr8.1:23707897-23707916 None:intergenic 35.0%
CATTACATTCCGATATCTAG+TGG - chr8.1:23709030-23709049 None:intergenic 35.0%
CCATGCTCCAAAATTTGTAA+TGG + chr8.1:23708777-23708796 MS.gene011628:intron 35.0%
GATAAAATCCAAAATCCACC+AGG - chr8.1:23708401-23708420 None:intergenic 35.0%
GCTCCAAAATTTGTAATGGT+AGG + chr8.1:23708781-23708800 MS.gene011628:intron 35.0%
GTAAGGAACATTAGCATAGT+AGG - chr8.1:23707354-23707373 None:intergenic 35.0%
GTATATTGATGAGCTTGCAT+CGG + chr8.1:23707478-23707497 MS.gene011628:CDS 35.0%
TAGCATAGTAGGCATAATCA+CGG - chr8.1:23707343-23707362 None:intergenic 35.0%
TCGGTTATTCCAATCAAAGA+TGG + chr8.1:23707497-23707516 MS.gene011628:CDS 35.0%
TGGTAGGTACAAAAAAATGG+AGG + chr8.1:23708797-23708816 MS.gene011628:intron 35.0%
TTCTCGTTGTCTAATACCAT+GGG + chr8.1:23708152-23708171 MS.gene011628:CDS 35.0%
! AAGGCTTTTCTACATATCCA+AGG + chr8.1:23709350-23709369 MS.gene011628:CDS 35.0%
! ATTGAAAGGTGCATACTGAA+AGG - chr8.1:23707908-23707927 None:intergenic 35.0%
! CTGGGAAAAGAAGTATGAAA+AGG + chr8.1:23708526-23708545 MS.gene011628:CDS 35.0%
! GACATTCGTTTTCTTTCTTC+AGG + chr8.1:23709323-23709342 MS.gene011628:intron 35.0%
! TCTCTAAAAGGATGTCTTCT+AGG - chr8.1:23709874-23709893 None:intergenic 35.0%
! TTTTCCTAGTAGATTAGGAC+TGG - chr8.1:23709771-23709790 None:intergenic 35.0%
! TTTTCTTTCTTCAGGTGTGA+AGG + chr8.1:23709331-23709350 MS.gene011628:intron 35.0%
!! AAAGTGTTGTCAGCAATTGT+GGG - chr8.1:23709125-23709144 None:intergenic 35.0%
!! AATGTAATGGACATGAATGC+AGG + chr8.1:23709041-23709060 MS.gene011628:CDS 35.0%
!! AGAAGACATCCTTTTAGAGA+TGG + chr8.1:23709874-23709893 MS.gene011628:CDS 35.0%
!! ATCTAAAATGGTGGATCATG+AGG + chr8.1:23709991-23710010 MS.gene011628:CDS 35.0%
!! CGAAGTTGATGTGATTAACA+AGG + chr8.1:23709937-23709956 MS.gene011628:CDS 35.0%
!! GCTCGACCTAAATTTTAAGA+TGG + chr8.1:23709669-23709688 MS.gene011628:intron 35.0%
!! GGTGGATTTTGGATTTTATC+TGG + chr8.1:23708401-23708420 MS.gene011628:CDS 35.0%
!! TAAAGTGTTGTCAGCAATTG+TGG - chr8.1:23709126-23709145 None:intergenic 35.0%
!! TGGAAGTTGATCGAGTTTTA+AGG + chr8.1:23708375-23708394 MS.gene011628:CDS 35.0%
!!! CCATTACAAATTTTGGAGCA+TGG - chr8.1:23708780-23708799 None:intergenic 35.0%
AATATCTTCTCGGGTGCAAA+TGG - chr8.1:23710022-23710041 None:intergenic 40.0%
ACATATCAAAGGCTCGTGAT+GGG - chr8.1:23708125-23708144 None:intergenic 40.0%
ACGTCTTTAGCTATTCTAGG+AGG - chr8.1:23708912-23708931 None:intergenic 40.0%
AGCACAAGTTCAGTTTGCAT+TGG + chr8.1:23708047-23708066 MS.gene011628:CDS 40.0%
AGGAAGAAACTTACTTGTCC+TGG - chr8.1:23709417-23709436 None:intergenic 40.0%
ATATCTTCTCGGGTGCAAAT+GGG - chr8.1:23710021-23710040 None:intergenic 40.0%
ATATGCGGTCCATCTCTAAA+AGG - chr8.1:23709886-23709905 None:intergenic 40.0%
ATTTGCACCCGAGAAGATAT+TGG + chr8.1:23710021-23710040 MS.gene011628:CDS 40.0%
CAAAATCAGCTTGTAAGGTG+AGG - chr8.1:23709633-23709652 None:intergenic 40.0%
CAAACTGAACTTGTGCTTCA+TGG - chr8.1:23708044-23708063 None:intergenic 40.0%
CAACTCATTAACCATCCACT+GGG + chr8.1:23707713-23707732 MS.gene011628:intron 40.0%
CACCCAATAATTGAATGCAG+AGG + chr8.1:23708340-23708359 MS.gene011628:intron 40.0%
CATATTAAGGCCAGAAGGAT+CGG + chr8.1:23709901-23709920 MS.gene011628:CDS 40.0%
CCAAGAACACCAATAATAGC+AGG - chr8.1:23708084-23708103 None:intergenic 40.0%
CGCATTATAATCCGAAATCG+TGG - chr8.1:23708739-23708758 None:intergenic 40.0%
CTGACAGTACCATCTTTGAT+TGG - chr8.1:23707509-23707528 None:intergenic 40.0%
GCCCTCTGCATTCAATTATT+GGG - chr8.1:23708345-23708364 None:intergenic 40.0%
GGAAAACGTACTACCAAACA+TGG + chr8.1:23708438-23708457 MS.gene011628:CDS 40.0%
GGAGAAGGCTAATCAAAACT+GGG + chr8.1:23707388-23707407 MS.gene011628:CDS 40.0%
GGGAATGTGTTCAAATTTCC+AGG + chr8.1:23707422-23707441 MS.gene011628:CDS 40.0%
GTTCTCGTTGTCTAATACCA+TGG + chr8.1:23708151-23708170 MS.gene011628:CDS 40.0%
TAAGAATCAACTGTTACGCC+TGG - chr8.1:23708939-23708958 None:intergenic 40.0%
TAATCACATCAACTTCGTCG+CGG - chr8.1:23709934-23709953 None:intergenic 40.0%
TAGAGATGGACCGCATATTA+AGG + chr8.1:23709888-23709907 MS.gene011628:CDS 40.0%
TATCTGGCCCTCCAATTAAT+TGG + chr8.1:23708417-23708436 MS.gene011628:CDS 40.0%
TCACTATGATCACTTGTGGA+TGG - chr8.1:23709443-23709462 None:intergenic 40.0%
TGATCACTTGTGGATGGAAA+AGG - chr8.1:23709437-23709456 None:intergenic 40.0%
TGCCCTCTGCATTCAATTAT+TGG - chr8.1:23708346-23708365 None:intergenic 40.0%
TGGAGAAGGCTAATCAAAAC+TGG + chr8.1:23707387-23707406 MS.gene011628:CDS 40.0%
TGTGCTTCATGGTTATCCTT+CGG - chr8.1:23708033-23708052 None:intergenic 40.0%
TTCAGTTTGCATTGGAACGA+GGG + chr8.1:23708055-23708074 MS.gene011628:CDS 40.0%
! CAACGCAATTTTTCCTCTTG+AGG - chr8.1:23707269-23707288 None:intergenic 40.0%
! CCTGCTATTATTGGTGTTCT+TGG + chr8.1:23708081-23708100 MS.gene011628:CDS 40.0%
! CGTCTTTAGCTATTCTAGGA+GGG - chr8.1:23708911-23708930 None:intergenic 40.0%
! CTAATACCATGGGCTGAAAA+TGG + chr8.1:23708162-23708181 MS.gene011628:CDS 40.0%
! CTTTTCCCAGCAAAGACTTT+CGG - chr8.1:23708516-23708535 None:intergenic 40.0%
! GAGATGGGAATCTAAAATGG+TGG + chr8.1:23709982-23710001 MS.gene011628:CDS 40.0%
! TAGGCATAATCACGGCTTTT+AGG - chr8.1:23707335-23707354 None:intergenic 40.0%
!! AAAATGGTGGATCATGAGGA+TGG + chr8.1:23709995-23710014 MS.gene011628:CDS 40.0%
!! ATCCTTCTGGCCTTAATATG+CGG - chr8.1:23709901-23709920 None:intergenic 40.0%
!! TATAGGAAGCTGACTTGCAA+GGG - chr8.1:23709242-23709261 None:intergenic 40.0%
!!! TTTTAAGGCCTGGTGGATTT+TGG + chr8.1:23708390-23708409 MS.gene011628:CDS 40.0%
AAAAGGAGTCGTGTACCCTT+CGG - chr8.1:23707306-23707325 None:intergenic 45.0%
AAAAGGGCGATATCGCTATC+TGG + chr8.1:23708543-23708562 MS.gene011628:CDS 45.0%
ACCATTAGGTCTCCTGCTAT+CGG + chr8.1:23709727-23709746 MS.gene011628:intron 45.0%
ATAGCAGGAGACCTAATGGT+GGG - chr8.1:23709727-23709746 None:intergenic 45.0%
ATCTAGCCGAAAGTCTTTGC+TGG + chr8.1:23708507-23708526 MS.gene011628:CDS 45.0%
ATTATGCAGGTTGCGAGTTG+GGG + chr8.1:23707964-23707983 MS.gene011628:intron 45.0%
GACATATCAAAGGCTCGTGA+TGG - chr8.1:23708126-23708145 None:intergenic 45.0%
GATTATGCAGGTTGCGAGTT+GGG + chr8.1:23707963-23707982 MS.gene011628:intron 45.0%
GCAACTCATTAACCATCCAC+TGG + chr8.1:23707712-23707731 MS.gene011628:intron 45.0%
GCTTCCAGTCCTAATCTACT+AGG + chr8.1:23709764-23709783 MS.gene011628:intron 45.0%
GGCAGAGCAGAAAAAAATCG+AGG + chr8.1:23708484-23708503 MS.gene011628:CDS 45.0%
GTGTTCAAATTTCCAGGTGG+AGG + chr8.1:23707428-23707447 MS.gene011628:CDS 45.0%
GTTCAGTTTGCATTGGAACG+AGG + chr8.1:23708054-23708073 MS.gene011628:CDS 45.0%
TCAGTTTGCATTGGAACGAG+GGG + chr8.1:23708056-23708075 MS.gene011628:CDS 45.0%
TCATTGGATCACCCACCATT+AGG + chr8.1:23709713-23709732 MS.gene011628:intron 45.0%
TCCACTGTCAGATGCTTGTA+AGG - chr8.1:23707371-23707390 None:intergenic 45.0%
TCCTTACAAGCATCTGACAG+TGG + chr8.1:23707367-23707386 MS.gene011628:CDS 45.0%
TCTAGCCGAAAGTCTTTGCT+GGG + chr8.1:23708508-23708527 MS.gene011628:CDS 45.0%
TGATCGGCACCACTAGATAT+CGG + chr8.1:23709018-23709037 MS.gene011628:CDS 45.0%
TGATTATGCAGGTTGCGAGT+TGG + chr8.1:23707962-23707981 MS.gene011628:intron 45.0%
TGGTACTGTCAGAACAGCAT+TGG + chr8.1:23707517-23707536 MS.gene011628:CDS 45.0%
TTGTGGTTAATTGTGCCCAG+TGG - chr8.1:23707731-23707750 None:intergenic 45.0%
TTTAATGCTTACTGGCCCAC+TGG + chr8.1:23707870-23707889 MS.gene011628:intron 45.0%
! AGCTATGTCATTTGCTCCGA+AGG + chr8.1:23708014-23708033 MS.gene011628:CDS 45.0%
! CACTAACCATTTTCAGCCCA+TGG - chr8.1:23708171-23708190 None:intergenic 45.0%
! CGCAATTTTTCCTCTTGAGG+TGG - chr8.1:23707266-23707285 None:intergenic 45.0%
! CTCTAGGGAATGTCATTGCT+CGG - chr8.1:23707214-23707233 None:intergenic 45.0%
! TAATCACGGCTTTTAGGCCA+TGG - chr8.1:23707329-23707348 None:intergenic 45.0%
! TGCAGAGGGCATGTATCTAA+TGG + chr8.1:23708355-23708374 MS.gene011628:intron 45.0%
! TTCACTTTGGCTGGTTACCT+CGG - chr8.1:23708841-23708860 None:intergenic 45.0%
!! GTATAGGAAGCTGACTTGCA+AGG - chr8.1:23709243-23709262 None:intergenic 45.0%
!!! GTTGATCGAGTTTTAAGGCC+TGG + chr8.1:23708380-23708399 MS.gene011628:CDS 45.0%
!!! AAATAGTAATATTTTATTTT+TGG - chr8.1:23709510-23709529 None:intergenic 5.0%
AAAGGAGTCGTGTACCCTTC+GGG - chr8.1:23707305-23707324 None:intergenic 50.0%
AACATGGAAGCGAACGAAGG+AGG + chr8.1:23708454-23708473 MS.gene011628:CDS 50.0%
ACCAGCCAAAGTGAAGTTGC+CGG + chr8.1:23708846-23708865 MS.gene011628:CDS 50.0%
ATGGACATGAATGCAGGCCT+TGG + chr8.1:23709047-23709066 MS.gene011628:CDS 50.0%
CAAGCATCTGACAGTGGAGA+AGG + chr8.1:23707373-23707392 MS.gene011628:CDS 50.0%
CCAAACATGGAAGCGAACGA+AGG + chr8.1:23708451-23708470 MS.gene011628:CDS 50.0%
CCTTCGTTCGCTTCCATGTT+TGG - chr8.1:23708454-23708473 None:intergenic 50.0%
CGGATTATGACCGATCCTTC+TGG - chr8.1:23709914-23709933 None:intergenic 50.0%
GACCGCATATTAAGGCCAGA+AGG + chr8.1:23709896-23709915 MS.gene011628:CDS 50.0%
GATAGCAGGAGACCTAATGG+TGG - chr8.1:23709728-23709747 None:intergenic 50.0%
GGTTAATTGTGCCCAGTGGA+TGG - chr8.1:23707727-23707746 None:intergenic 50.0%
TCATTGCTCGGTCTTGCTCT+TGG - chr8.1:23707202-23707221 None:intergenic 50.0%
TCCGATAGCAGGAGACCTAA+TGG - chr8.1:23709731-23709750 None:intergenic 50.0%
! ACAGCATTGGACACTGGTTG+CGG + chr8.1:23707530-23707549 MS.gene011628:CDS 50.0%
! CGGCTTTTAGGCCATGGAAA+AGG - chr8.1:23707323-23707342 None:intergenic 50.0%
! CTCGTGATGGGAATGGAAGA+CGG - chr8.1:23708113-23708132 None:intergenic 50.0%
! GGTACACGACTCCTTTTCCA+TGG + chr8.1:23707309-23707328 MS.gene011628:CDS 50.0%
! GTCAGAACAGCATTGGACAC+TGG + chr8.1:23707524-23707543 MS.gene011628:CDS 50.0%
! TCAAAGGCTCGTGATGGGAA+TGG - chr8.1:23708120-23708139 None:intergenic 50.0%
! TCACTTTGGCTGGTTACCTC+GGG - chr8.1:23708840-23708859 None:intergenic 50.0%
!! AAGGCATTGTCCACCTCAAG+AGG + chr8.1:23707253-23707272 MS.gene011628:CDS 50.0%
!! ATATACGCATCGGCTCCTTG+AGG - chr8.1:23707464-23707483 None:intergenic 50.0%
!! CGAGGGGTACCTGCTATTAT+TGG + chr8.1:23708072-23708091 MS.gene011628:CDS 50.0%
!! TATACGCATCGGCTCCTTGA+GGG - chr8.1:23707463-23707482 None:intergenic 50.0%
!!! GATCGAGTTTTAAGGCCTGG+TGG + chr8.1:23708383-23708402 MS.gene011628:CDS 50.0%
AAGGAAGTAAACCGGGCCAG+TGG - chr8.1:23707889-23707908 None:intergenic 55.0%
AGCCAAAGTGAAGTTGCCGG+AGG + chr8.1:23708849-23708868 MS.gene011628:CDS 55.0%
AGGAAGTAAACCGGGCCAGT+GGG - chr8.1:23707888-23707907 None:intergenic 55.0%
AGGGCGATATCGCTATCTGG+AGG + chr8.1:23708546-23708565 MS.gene011628:CDS 55.0%
CTCCTCCGGCAACTTCACTT+TGG - chr8.1:23708854-23708873 None:intergenic 55.0%
GACATGAATGCAGGCCTTGG+AGG + chr8.1:23709050-23709069 MS.gene011628:CDS 55.0%
GCGAACGAAGGAGGATCTGA+AGG + chr8.1:23708463-23708482 MS.gene011628:CDS 55.0%
GGAGGAACCATGTTCCCTCA+AGG + chr8.1:23707446-23707465 MS.gene011628:CDS 55.0%
GTGCAGCTGCAAATCCTCCA+AGG - chr8.1:23709067-23709086 None:intergenic 55.0%
TCCGGCAACTTCACTTTGGC+TGG - chr8.1:23708850-23708869 None:intergenic 55.0%
TCTCCTGCTATCGGACCAGT+TGG + chr8.1:23709736-23709755 MS.gene011628:intron 55.0%
! AGCATTGGACACTGGTTGCG+GGG + chr8.1:23707532-23707551 MS.gene011628:CDS 55.0%
! ATCGGCTCCTTGAGGGAACA+TGG - chr8.1:23707456-23707475 None:intergenic 55.0%
! CACTTTGGCTGGTTACCTCG+GGG - chr8.1:23708839-23708858 None:intergenic 55.0%
! CAGCATTGGACACTGGTTGC+GGG + chr8.1:23707531-23707550 MS.gene011628:CDS 55.0%
ACCCTTCGGGAGCAGGAATG+AGG - chr8.1:23707292-23707311 None:intergenic 60.0%
CTGCAAAACCCCTATCCCCG+AGG + chr8.1:23708821-23708840 MS.gene011628:CDS 60.0%
GACTGGAAGCCTGAGCCAAC+TGG - chr8.1:23709754-23709773 None:intergenic 60.0%
GAGCCAACTGGTCCGATAGC+AGG - chr8.1:23709742-23709761 None:intergenic 60.0%
GCCTCATTCCTGCTCCCGAA+GGG + chr8.1:23707288-23707307 MS.gene011628:CDS 60.0%
GCTCGGTCTTGCTCTTGGCA+AGG - chr8.1:23707197-23707216 None:intergenic 60.0%
GCTGGTTACCTCGGGGATAG+GGG - chr8.1:23708832-23708851 None:intergenic 60.0%
GGGAACATGGTTCCTCCACC+TGG - chr8.1:23707443-23707462 None:intergenic 60.0%
GGGACTGCAAACAGCCTAGC+AGG - chr8.1:23708891-23708910 None:intergenic 60.0%
TGCCTCATTCCTGCTCCCGA+AGG + chr8.1:23707287-23707306 MS.gene011628:CDS 60.0%
! GCTATCGGACCAGTTGGCTC+AGG + chr8.1:23709742-23709761 MS.gene011628:intron 60.0%
! GGCTGGTTACCTCGGGGATA+GGG - chr8.1:23708833-23708852 None:intergenic 60.0%
! TGGCTGGTTACCTCGGGGAT+AGG - chr8.1:23708834-23708853 None:intergenic 60.0%
GTCGTGTACCCTTCGGGAGC+AGG - chr8.1:23707299-23707318 None:intergenic 65.0%
TGCTTACTGGCCCACTGGCC+CGG + chr8.1:23707875-23707894 MS.gene011628:intron 65.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 23707155 23710096 23707155 ID=MS.gene011628
chr8.1 mRNA 23707155 23710096 23707155 ID=MS.gene011628.t1;Parent=MS.gene011628
chr8.1 exon 23707155 23707553 23707155 ID=MS.gene011628.t1.exon1;Parent=MS.gene011628.t1
chr8.1 CDS 23707155 23707553 23707155 ID=cds.MS.gene011628.t1;Parent=MS.gene011628.t1
chr8.1 exon 23707973 23708183 23707973 ID=MS.gene011628.t1.exon2;Parent=MS.gene011628.t1
chr8.1 CDS 23707973 23708183 23707973 ID=cds.MS.gene011628.t1;Parent=MS.gene011628.t1
chr8.1 exon 23708360 23708642 23708360 ID=MS.gene011628.t1.exon3;Parent=MS.gene011628.t1
chr8.1 CDS 23708360 23708642 23708360 ID=cds.MS.gene011628.t1;Parent=MS.gene011628.t1
chr8.1 exon 23708803 23709189 23708803 ID=MS.gene011628.t1.exon4;Parent=MS.gene011628.t1
chr8.1 CDS 23708803 23709189 23708803 ID=cds.MS.gene011628.t1;Parent=MS.gene011628.t1
chr8.1 exon 23709345 23709422 23709345 ID=MS.gene011628.t1.exon5;Parent=MS.gene011628.t1
chr8.1 CDS 23709345 23709422 23709345 ID=cds.MS.gene011628.t1;Parent=MS.gene011628.t1
chr8.1 exon 23709865 23710096 23709865 ID=MS.gene011628.t1.exon6;Parent=MS.gene011628.t1
chr8.1 CDS 23709865 23710096 23709865 ID=cds.MS.gene011628.t1;Parent=MS.gene011628.t1
Gene Sequence

>MS.gene011628

ATGTTCAAGGCATGTGATGTAAAATATACTGATTATACACCTTGCCAAGAGCAAGACCGAGCAATGACATTCCCTAGAGAAAACATGATCTATAGGGAAAGGCATTGTCCACCTCAAGAGGAAAAATTGCGTTGCCTCATTCCTGCTCCCGAAGGGTACACGACTCCTTTTCCATGGCCTAAAAGCCGTGATTATGCCTACTATGCTAATGTTCCTTACAAGCATCTGACAGTGGAGAAGGCTAATCAAAACTGGGTGAAATTTGAAGGGAATGTGTTCAAATTTCCAGGTGGAGGAACCATGTTCCCTCAAGGAGCCGATGCGTATATTGATGAGCTTGCATCGGTTATTCCAATCAAAGATGGTACTGTCAGAACAGCATTGGACACTGGTTGCGGGGTAAGCTTTCATGTCAAATAATCCTTTTGATATAGTATGTTATTTTTCTTTGTTGAGAAATATTTCGACACACAAATTTGACATCAAATTTGATGGTTACTATTCAGATGTGTGGTTAATTACGTTTAGTTGATGATTAATGAATATAACAAGGTGTAGCAACTCATTAACCATCCACTGGGCACAATTAACCACAATTTTCAAATGTGTTTAATTATGTGTAATGTATAATGGGGTTTTGTCTATTGGATTCCAAATTTCTCAATTTTCAGTGTATTTAGTATACTGAAGTCGGAATCATTTGTCCTTTCTTTGTTTTAATGCTTACTGGCCCACTGGCCCGGTTTACTTCCTTTCAGTATGCACCTTTCAATTGCTTCTTGATTGTTGTAGCAATATAAGCGTGAATGATTATGCAGGTTGCGAGTTGGGGAGCGTACTTGCTAAAGAGAAATGTGCTAGCTATGTCATTTGCTCCGAAGGATAACCATGAAGCACAAGTTCAGTTTGCATTGGAACGAGGGGTACCTGCTATTATTGGTGTTCTTGGTTCGATCCGTCTTCCATTCCCATCACGAGCCTTTGATATGTCTCAGTGTTCTCGTTGTCTAATACCATGGGCTGAAAATGGTTAGTGCTAAATTAGACAGTCAATAAGATTGATCTAGAATACAGTATTATCGGCATTTTCTTATGTCGATGATGATATTCCTTAACTTCTAAATATAATCATGCAAATGTTAATAATTCTGAAAATCTGAATGCAACATTGTTTAGTTGATTTTTCACCCAATAATTGAATGCAGAGGGCATGTATCTAATGGAAGTTGATCGAGTTTTAAGGCCTGGTGGATTTTGGATTTTATCTGGCCCTCCAATTAATTGGAAAACGTACTACCAAACATGGAAGCGAACGAAGGAGGATCTGAAGGCAGAGCAGAAAAAAATCGAGGATCTAGCCGAAAGTCTTTGCTGGGAAAAGAAGTATGAAAAGGGCGATATCGCTATCTGGAGGAAGAAAATAAATGCTAAATCATGTCAAAGAAAATCTCCCAATTTATGTGATTTAGATAATGCTGATGATGTTTGGTAAGCCCTGATCATTTCTACACATTTCATTTAACAAGTATAATGATTCATTTGTTGTTAGAGAGATTTGAATAATTATTTGTTCATATAATTCCACGATTTCGGATTATAATGCGCTCATGAATAACTTTTCTCCATGCTCCAAAATTTGTAATGGTAGGTACAAAAAAATGGAGGTCTGCAAAACCCCTATCCCCGAGGTAACCAGCCAAAGTGAAGTTGCCGGAGGAGAATTGAAGAAGTTTCCTGCTAGGCTGTTTGCAGTCCCTCCTAGAATAGCTAAAGACGTTATTCCAGGCGTAACAGTTGATTCTTATCAAGAGGACAACAAATTATGGAAAAAGCGTGTTAATAATTACAAAAGAATTAATAGATTGATCGGCACCACTAGATATCGGAATGTAATGGACATGAATGCAGGCCTTGGAGGATTTGCAGCTGCACTTGAATCACAAAAATCTTGGGTGATGAATGCTGTGCCCACAATTGCTGACAACACTTTAGGTGTTATCTATGAAAGAGGTCTCATTGGTATTTATCATGACTGGTAAGTTTCTAAAATTATCTTCATAAAGTTTTCTAATTTTATGATGATTCCCTTGCAAGTCAGCTTCCTATACTCTAAAATGATTAATTAAACTGATATTTATGGATATTTTGTTATGGTATGAAATTGCAATGACATTCGTTTTCTTTCTTCAGGTGTGAAGGCTTTTCTACATATCCAAGGACATATGATCTTATTCATGCCAATGGTTTATTTAGTTTGTACCAGGACAAGTAAGTTTCTTCCTTTTCCATCCACAAGTGATCATAGTGATAATTGGTAATTTGAAATTATAACTATATCAAGTCTTTTACTTACCAAAAATAAAATATTACTATTTTTACTGATTTTTCCAATTCTGGTATAATTGAGACTATAATTTGTTTGCCCCACATTTGATAAGATTAGACCTGAAAATATGTTTATAAGTGGTAGACAATCCTCACCTTACAAGCTGATTTTGTAAGAGTTAAGTTAAAGCTCGACCTAAATTTTAAGATGGTATCAAAGTCTATTCAAGATTTCATTGGATCACCCACCATTAGGTCTCCTGCTATCGGACCAGTTGGCTCAGGCTTCCAGTCCTAATCTACTAGGAAAAAAAAACAGAGAACTTCAACATGTGATTATAATTCTGACTTAATTTAACATAAGTATTGTTGATTTGATTGACAGGTGCAACCTAGAAGACATCCTTTTAGAGATGGACCGCATATTAAGGCCAGAAGGATCGGTCATAATCCGCGACGAAGTTGATGTGATTAACAAGGTTCAGAAAATTGTTAGGGGAATGAGATGGGAATCTAAAATGGTGGATCATGAGGATGGCCCATTTGCACCCGAGAAGATATTGGTTATTGTAAAAGAGTATTGGGTTGGCAGCAGTAAAAACAACACATCCAGTTAG
Protein sequence

>MS.gene011628.t1

MFKACDVKYTDYTPCQEQDRAMTFPRENMIYRERHCPPQEEKLRCLIPAPEGYTTPFPWPKSRDYAYYANVPYKHLTVEKANQNWVKFEGNVFKFPGGGTMFPQGADAYIDELASVIPIKDGTVRTALDTGCGVASWGAYLLKRNVLAMSFAPKDNHEAQVQFALERGVPAIIGVLGSIRLPFPSRAFDMSQCSRCLIPWAENEGMYLMEVDRVLRPGGFWILSGPPINWKTYYQTWKRTKEDLKAEQKKIEDLAESLCWEKKYEKGDIAIWRKKINAKSCQRKSPNLCDLDNADDVWYKKMEVCKTPIPEVTSQSEVAGGELKKFPARLFAVPPRIAKDVIPGVTVDSYQEDNKLWKKRVNNYKRINRLIGTTRYRNVMDMNAGLGGFAAALESQKSWVMNAVPTIADNTLGVIYERGLIGIYHDWCEGFSTYPRTYDLIHANGLFSLYQDKCNLEDILLEMDRILRPEGSVIIRDEVDVINKVQKIVRGMRWESKMVDHEDGPFAPEKILVIVKEYWVGSSKNNTSS