Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25872.t1 | RHN68870.1 | 95.1 | 573 | 16 | 2 | 4 | 576 | 343 | 903 | 0.00E+00 | 1118.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25872.t1 | O24370 | 62.6 | 575 | 199 | 6 | 4 | 576 | 339 | 899 | 4.3e-218 | 758.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25872.t1 | A0A396ITZ7 | 95.1 | 573 | 16 | 2 | 4 | 576 | 343 | 903 | 0.0e+00 | 1118.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050137 | MS.gene25872 | 0.807584 | 4.71E-50 | -1.69E-46 |
| MS.gene050442 | MS.gene25872 | 0.808282 | 3.34E-50 | -1.69E-46 |
| MS.gene054468 | MS.gene25872 | 0.808946 | 2.41E-50 | -1.69E-46 |
| MS.gene05604 | MS.gene25872 | 0.81141 | 7.10E-51 | -1.69E-46 |
| MS.gene057026 | MS.gene25872 | 0.808095 | 3.67E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25872.t1 | MTR_3g479460 | 95.113 | 573 | 16 | 2 | 4 | 576 | 343 | 903 | 0.0 | 1125 |
| MS.gene25872.t1 | MTR_3g079450 | 76.265 | 573 | 123 | 3 | 4 | 576 | 343 | 902 | 0.0 | 926 |
| MS.gene25872.t1 | MTR_3g079420 | 77.526 | 574 | 115 | 4 | 4 | 576 | 305 | 865 | 0.0 | 898 |
| MS.gene25872.t1 | MTR_4g066170 | 65.278 | 576 | 183 | 5 | 3 | 576 | 346 | 906 | 0.0 | 811 |
| MS.gene25872.t1 | MTR_8g080230 | 50.780 | 577 | 264 | 7 | 3 | 576 | 357 | 916 | 0.0 | 611 |
| MS.gene25872.t1 | MTR_8g020970 | 48.611 | 576 | 274 | 8 | 4 | 575 | 369 | 926 | 0.0 | 572 |
| MS.gene25872.t1 | MTR_1g083020 | 47.130 | 575 | 284 | 9 | 4 | 576 | 302 | 858 | 1.60e-172 | 511 |
| MS.gene25872.t1 | MTR_1g104650 | 46.496 | 585 | 279 | 11 | 4 | 576 | 294 | 856 | 7.94e-172 | 509 |
| MS.gene25872.t1 | MTR_7g113410 | 44.637 | 578 | 294 | 11 | 4 | 576 | 311 | 867 | 1.25e-165 | 493 |
| MS.gene25872.t1 | MTR_4g088810 | 48.024 | 506 | 250 | 5 | 71 | 575 | 401 | 894 | 1.52e-165 | 494 |
| MS.gene25872.t1 | MTR_8g018730 | 43.750 | 576 | 298 | 10 | 4 | 576 | 32 | 584 | 2.44e-165 | 483 |
| MS.gene25872.t1 | MTR_8g018420 | 45.095 | 581 | 285 | 11 | 4 | 576 | 302 | 856 | 7.80e-165 | 491 |
| MS.gene25872.t1 | MTR_8g018570 | 44.521 | 584 | 290 | 11 | 1 | 576 | 313 | 870 | 8.46e-165 | 491 |
| MS.gene25872.t1 | MTR_3g079450 | 71.963 | 321 | 77 | 3 | 4 | 324 | 343 | 650 | 2.20e-164 | 483 |
| MS.gene25872.t1 | MTR_8g018735 | 43.674 | 577 | 297 | 10 | 4 | 576 | 313 | 865 | 5.94e-164 | 489 |
| MS.gene25872.t1 | MTR_8g018730 | 43.847 | 577 | 298 | 10 | 3 | 576 | 281 | 834 | 9.86e-163 | 485 |
| MS.gene25872.t1 | MTR_2g099570 | 44.097 | 576 | 297 | 10 | 4 | 576 | 308 | 861 | 2.13e-162 | 485 |
| MS.gene25872.t1 | MTR_8g018730 | 43.750 | 576 | 298 | 10 | 4 | 576 | 312 | 864 | 1.61e-161 | 483 |
| MS.gene25872.t1 | MTR_2g099560 | 44.174 | 575 | 296 | 10 | 4 | 576 | 312 | 863 | 1.92e-161 | 483 |
| MS.gene25872.t1 | MTR_8g018690 | 43.847 | 577 | 298 | 10 | 4 | 576 | 291 | 845 | 1.92e-159 | 477 |
| MS.gene25872.t1 | MTR_8g018690 | 43.847 | 577 | 298 | 10 | 4 | 576 | 311 | 865 | 2.45e-159 | 477 |
| MS.gene25872.t1 | MTR_8g018430 | 45.095 | 581 | 285 | 11 | 4 | 576 | 307 | 861 | 5.91e-159 | 476 |
| MS.gene25872.t1 | MTR_8g018510 | 44.406 | 581 | 289 | 11 | 4 | 576 | 315 | 869 | 1.09e-157 | 473 |
| MS.gene25872.t1 | MTR_8g020990 | 43.322 | 584 | 297 | 11 | 1 | 576 | 311 | 868 | 1.60e-157 | 473 |
| MS.gene25872.t1 | MTR_8g018550 | 43.836 | 584 | 294 | 11 | 1 | 576 | 311 | 868 | 2.36e-157 | 472 |
| MS.gene25872.t1 | MTR_8g018520 | 44.597 | 583 | 291 | 12 | 1 | 576 | 311 | 868 | 2.77e-157 | 472 |
| MS.gene25872.t1 | MTR_5g024020 | 42.931 | 580 | 297 | 10 | 4 | 576 | 315 | 867 | 7.24e-157 | 471 |
| MS.gene25872.t1 | MTR_8g018450 | 48.235 | 510 | 253 | 8 | 71 | 576 | 326 | 828 | 7.37e-157 | 469 |
| MS.gene25872.t1 | MTR_3g081130 | 43.674 | 577 | 299 | 11 | 4 | 576 | 232 | 786 | 5.40e-155 | 463 |
| MS.gene25872.t1 | MTR_3g081130 | 43.674 | 577 | 299 | 11 | 4 | 576 | 304 | 858 | 3.00e-154 | 464 |
| MS.gene25872.t1 | MTR_8g018590 | 46.538 | 520 | 261 | 11 | 64 | 576 | 314 | 823 | 5.04e-149 | 449 |
| MS.gene25872.t1 | MTR_5g024020 | 40.690 | 580 | 274 | 9 | 4 | 576 | 315 | 831 | 1.18e-144 | 438 |
| MS.gene25872.t1 | MTR_8g018620 | 44.227 | 511 | 262 | 5 | 67 | 576 | 319 | 807 | 1.10e-139 | 425 |
| MS.gene25872.t1 | MTR_8g018650 | 42.413 | 547 | 287 | 7 | 36 | 576 | 283 | 807 | 3.29e-139 | 423 |
| MS.gene25872.t1 | MTR_6g452500 | 39.676 | 494 | 275 | 10 | 71 | 559 | 130 | 605 | 3.64e-119 | 366 |
| MS.gene25872.t1 | MTR_8g021020 | 43.810 | 420 | 222 | 5 | 164 | 576 | 19 | 431 | 2.98e-116 | 352 |
| MS.gene25872.t1 | MTR_8g011340 | 41.416 | 466 | 253 | 10 | 71 | 531 | 372 | 822 | 8.11e-116 | 363 |
| MS.gene25872.t1 | MTR_8g020970 | 45.820 | 323 | 158 | 5 | 4 | 324 | 369 | 676 | 4.52e-92 | 297 |
| MS.gene25872.t1 | MTR_7g012030 | 97.479 | 119 | 3 | 0 | 226 | 344 | 85 | 203 | 3.57e-78 | 246 |
| MS.gene25872.t1 | MTR_8g018735 | 42.462 | 325 | 161 | 9 | 4 | 324 | 313 | 615 | 8.03e-75 | 250 |
| MS.gene25872.t1 | MTR_6g046330 | 88.462 | 130 | 4 | 1 | 226 | 344 | 75 | 204 | 1.72e-71 | 232 |
| MS.gene25872.t1 | MTR_8g463810 | 49.569 | 232 | 53 | 2 | 129 | 360 | 190 | 357 | 7.85e-65 | 218 |
| MS.gene25872.t1 | MTR_4g088805 | 46.154 | 91 | 48 | 1 | 486 | 575 | 1 | 91 | 4.60e-18 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25872.t1 | AT3G45140 | 59.930 | 574 | 211 | 4 | 4 | 576 | 341 | 896 | 0.0 | 724 |
| MS.gene25872.t1 | AT3G45140 | 59.930 | 574 | 211 | 4 | 4 | 576 | 199 | 754 | 0.0 | 722 |
| MS.gene25872.t1 | AT1G67560 | 48.797 | 582 | 275 | 9 | 1 | 576 | 353 | 917 | 0.0 | 568 |
| MS.gene25872.t1 | AT1G17420 | 47.660 | 577 | 280 | 8 | 4 | 576 | 361 | 919 | 0.0 | 562 |
| MS.gene25872.t1 | AT1G72520 | 47.751 | 578 | 279 | 10 | 4 | 576 | 367 | 926 | 0.0 | 556 |
| MS.gene25872.t1 | AT1G55020 | 48.532 | 579 | 271 | 12 | 4 | 576 | 302 | 859 | 1.62e-175 | 519 |
| MS.gene25872.t1 | AT3G22400 | 45.798 | 583 | 286 | 11 | 4 | 576 | 324 | 886 | 1.17e-169 | 504 |
Find 132 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGAGCAATGTTAAATTAT+TGG | 0.149707 | 3.2:+69809651 | None:intergenic |
| ATTCTGGTGGACCATAAATT+TGG | 0.173285 | 3.2:+69809208 | None:intergenic |
| CTAGCAATTGTTGGTCTATT+AGG | 0.203211 | 3.2:+69807919 | None:intergenic |
| CAATTATTGCCTTGACTAAT+TGG | 0.209625 | 3.2:+69809354 | None:intergenic |
| TTGACTAATTGGATGCTATT+TGG | 0.210653 | 3.2:+69809365 | None:intergenic |
| GAGCTCACTAGACCTATTAT+TGG | 0.251180 | 3.2:-69808888 | MS.gene25872:CDS |
| TGACTAATTGGATGCTATTT+GGG | 0.253957 | 3.2:+69809366 | None:intergenic |
| CTTCTGATTCTACCAATCTT+TGG | 0.255433 | 3.2:-69808830 | MS.gene25872:CDS |
| ATAGCATTTGAAAGGTTTAA+TGG | 0.262850 | 3.2:-69807688 | MS.gene25872:CDS |
| TCAAATGCTATCTTTATATC+TGG | 0.267837 | 3.2:+69807700 | None:intergenic |
| AACTTTGCACAATATGCTTA+TGG | 0.278802 | 3.2:-69807952 | MS.gene25872:CDS |
| AAATTAGAATCCCAAATTTA+TGG | 0.285172 | 3.2:-69809219 | MS.gene25872:CDS |
| TCAACCTGGGAATGGCCTTT+TGG | 0.293605 | 3.2:+69809632 | None:intergenic |
| CAAGCCTGAGCAAACACTTT+TGG | 0.295167 | 3.2:-69807842 | MS.gene25872:CDS |
| TTTAGGCCATGTTGTGCATT+AGG | 0.307604 | 3.2:+69808249 | None:intergenic |
| TATCAAAGCGCAAAAGGTTT+TGG | 0.308278 | 3.2:+69809590 | None:intergenic |
| GATTCAATGATGCTTGGATT+TGG | 0.313188 | 3.2:+69808132 | None:intergenic |
| CCAATGATGGTCTTCTCATA+TGG | 0.313736 | 3.2:-69808200 | MS.gene25872:CDS |
| ATTCTACCAATCTTTGGCTT+TGG | 0.318489 | 3.2:-69808824 | MS.gene25872:CDS |
| TGTGGTTTGTCACCAATAAT+AGG | 0.333497 | 3.2:+69808876 | None:intergenic |
| GTGACTCCAGGTCCTGAAAA+TGG | 0.335649 | 3.2:+69807565 | None:intergenic |
| CATTTGTGATTGCAACAAAT+AGG | 0.340981 | 3.2:-69808627 | MS.gene25872:CDS |
| CTACCAATCTTTGGCTTTGG+AGG | 0.343171 | 3.2:-69808821 | MS.gene25872:CDS |
| GCTTTGGCAATTTGATTTGC+AGG | 0.346703 | 3.2:-69808434 | MS.gene25872:CDS |
| GTCATCGAGTCGCAGATAAT+TGG | 0.351690 | 3.2:-69809168 | MS.gene25872:CDS |
| TACTAAATAGATATGCTATA+TGG | 0.354697 | 3.2:+69807529 | None:intergenic |
| TTCTCCCATTCTTCCTTTGT+AGG | 0.357198 | 3.2:+69807874 | None:intergenic |
| AATGGTTTCATTAGCTCATA+AGG | 0.360058 | 3.2:+69807583 | None:intergenic |
| TAGCATTTGAAAGGTTTAAT+GGG | 0.363606 | 3.2:-69807687 | MS.gene25872:CDS |
| CAAATACTAATTTGAAGAAT+AGG | 0.370666 | 3.2:-69807624 | MS.gene25872:CDS |
| GTGCAGGAGACAAATTCTTT+TGG | 0.372279 | 3.2:-69809433 | MS.gene25872:intron |
| AGTCTTCAATTGCTAGCTTT+AGG | 0.379422 | 3.2:+69808232 | None:intergenic |
| TTCTGGTGGACCATAAATTT+GGG | 0.383171 | 3.2:+69809209 | None:intergenic |
| AAACAATTTCTTCTCTTGAA+TGG | 0.386249 | 3.2:+69809040 | None:intergenic |
| TCTCTCGTGATAGCTGATTC+TGG | 0.393236 | 3.2:+69809192 | None:intergenic |
| GAGATTCTTATTAGTTCATA+TGG | 0.393969 | 3.2:-69808523 | MS.gene25872:CDS |
| TGGCTTCAATGTGCCTTGTT+TGG | 0.396948 | 3.2:+69808920 | None:intergenic |
| CTGTGGCATATGATAAGCTT+TGG | 0.401553 | 3.2:-69808450 | MS.gene25872:CDS |
| TTTGCTAGGGAGACTTTGGC+AGG | 0.413977 | 3.2:-69809395 | MS.gene25872:CDS |
| TCCCTCACTTTGCTTACATA+AGG | 0.416450 | 3.2:+69808990 | None:intergenic |
| TTTCATTTACCATCATCTCT+TGG | 0.418695 | 3.2:-69809676 | MS.gene25872:CDS |
| TGATCAGATTCAATGATGCT+TGG | 0.424472 | 3.2:+69808126 | None:intergenic |
| ACCAGTGGCTTATAAGTTCA+TGG | 0.425133 | 3.2:+69808760 | None:intergenic |
| TCTCCCATTCTTCCTTTGTA+GGG | 0.428559 | 3.2:+69807875 | None:intergenic |
| CTATTTGTTGCAATCACAAA+TGG | 0.433779 | 3.2:+69808628 | None:intergenic |
| TACCGGTGTAGAAGATCATT+TGG | 0.433954 | 3.2:+69808406 | None:intergenic |
| TTCACCAGATGAAGAGTACT+TGG | 0.441500 | 3.2:-69807755 | MS.gene25872:CDS |
| AGAAGACCATCATTGGCAAA+AGG | 0.448419 | 3.2:+69808207 | None:intergenic |
| CATGTTCTTACTCATGATAC+TGG | 0.449029 | 3.2:-69808786 | MS.gene25872:CDS |
| GTATGATAATAAGTTCAAAA+TGG | 0.450817 | 3.2:+69807780 | None:intergenic |
| CTGAAGAATACTACACTGTA+TGG | 0.452168 | 3.2:-69808966 | MS.gene25872:CDS |
| TAATTTAACATTGCTCCAAA+AGG | 0.464271 | 3.2:-69809647 | MS.gene25872:CDS |
| AAGGTTTAATGGGAGATTGA+AGG | 0.467037 | 3.2:-69807677 | MS.gene25872:CDS |
| GGAATTTGCTAGGGAGACTT+TGG | 0.467432 | 3.2:-69809399 | MS.gene25872:CDS |
| ACTCCCTTTCCAGTGACTCC+AGG | 0.469105 | 3.2:+69807553 | None:intergenic |
| ATGTTGTTTCTAGCAATTGT+TGG | 0.470322 | 3.2:+69807910 | None:intergenic |
| TGTCCCAAGTACTCTTCATC+TGG | 0.470767 | 3.2:+69807751 | None:intergenic |
| ATGGGATGCAATTAAACAAT+GGG | 0.473897 | 3.2:-69808181 | MS.gene25872:CDS |
| CCATATGAGAAGACCATCAT+TGG | 0.474130 | 3.2:+69808200 | None:intergenic |
| AAGACCCTACAAAGGAAGAA+TGG | 0.474435 | 3.2:-69807879 | MS.gene25872:CDS |
| CACTCCAAAAGTGTTTGCTC+AGG | 0.477405 | 3.2:+69807838 | None:intergenic |
| TCCTTTGTAGGGTCTTCTGT+AGG | 0.484655 | 3.2:+69807886 | None:intergenic |
| AGACCCTACAAAGGAAGAAT+GGG | 0.490464 | 3.2:-69807878 | MS.gene25872:CDS |
| TTGAAGAATAGGAATGGAGC+TGG | 0.490528 | 3.2:-69807613 | MS.gene25872:CDS |
| ATAGACGAACTTTACAAAGA+AGG | 0.490922 | 3.2:-69809700 | MS.gene25872:CDS |
| CTGGAGTATCAAAGCGCAAA+AGG | 0.494625 | 3.2:+69809584 | None:intergenic |
| CATCATCACCACTATAGCTT+GGG | 0.495297 | 3.2:-69808001 | MS.gene25872:CDS |
| TAATTGGATGCTATTTGGGT+TGG | 0.495555 | 3.2:+69809370 | None:intergenic |
| GGACCTGGAGTCACTGGAAA+GGG | 0.496747 | 3.2:-69807556 | MS.gene25872:CDS |
| TGGACAGAAGTTCGAACAAA+AGG | 0.507956 | 3.2:-69808087 | MS.gene25872:CDS |
| ATTAGCAACTTTAATCAACC+TGG | 0.508311 | 3.2:+69809618 | None:intergenic |
| AACTTTAATCAACCTGGGAA+TGG | 0.508384 | 3.2:+69809624 | None:intergenic |
| GACAACTCATTGAACCATCA+TGG | 0.509837 | 3.2:-69807732 | MS.gene25872:CDS |
| ACATCATCACCACTATAGCT+TGG | 0.510325 | 3.2:-69808002 | MS.gene25872:CDS |
| AAGCCTCCAAAGCCAAAGAT+TGG | 0.513343 | 3.2:+69808818 | None:intergenic |
| AGTACTCTTCATCTGGTGAA+TGG | 0.520631 | 3.2:+69807758 | None:intergenic |
| TGCTCCAAAAGGCCATTCCC+AGG | 0.522858 | 3.2:-69809636 | MS.gene25872:CDS |
| GAAGACCATCATTGGCAAAA+GGG | 0.524945 | 3.2:+69808208 | None:intergenic |
| ACTAATTTGAAGAATAGGAA+TGG | 0.529661 | 3.2:-69807619 | MS.gene25872:CDS |
| TTCGCAAATTCAAGCAACCT+TGG | 0.534313 | 3.2:-69807809 | MS.gene25872:CDS |
| CTGTTCTTCCTCACCAAACA+AGG | 0.534647 | 3.2:-69808933 | MS.gene25872:CDS |
| CATAAGGTAGATATAAATCA+TGG | 0.538440 | 3.2:+69809006 | None:intergenic |
| TATCAGATGAGGAATTTGCT+AGG | 0.542131 | 3.2:-69809409 | MS.gene25872:CDS |
| GGGAGATTGAAGGAAATTGA+AGG | 0.543222 | 3.2:-69807667 | MS.gene25872:CDS |
| CAATGATGGTCTTCTCATAT+GGG | 0.543920 | 3.2:-69808199 | MS.gene25872:CDS |
| AGATGCTACCCAAGCTATAG+TGG | 0.544008 | 3.2:+69807993 | None:intergenic |
| GGATGCAGTAACTTGTAGAT+TGG | 0.544887 | 3.2:+69808586 | None:intergenic |
| ATATAAAGATAGCATTTGAA+AGG | 0.547239 | 3.2:-69807696 | MS.gene25872:CDS |
| GTGAAGATTTGTTTCCATTG+TGG | 0.552925 | 3.2:+69808858 | None:intergenic |
| TGAAGAATAGGAATGGAGCT+GGG | 0.560809 | 3.2:-69807612 | MS.gene25872:CDS |
| TGCTAGGGAGACTTTGGCAG+GGG | 0.560834 | 3.2:-69809393 | MS.gene25872:CDS |
| CTTTGGCAATTTGATTTGCA+GGG | 0.562249 | 3.2:-69808433 | MS.gene25872:CDS |
| TTATTGGATCCAAGAGATGA+TGG | 0.563781 | 3.2:+69809667 | None:intergenic |
| TGGTTATACCACAGTTGAAG+AGG | 0.565567 | 3.2:-69809148 | MS.gene25872:intron |
| ACCATGAACTTATAAGCCAC+TGG | 0.574627 | 3.2:-69808761 | MS.gene25872:intron |
| TCTGGATTCTCATCCCATGA+TGG | 0.575349 | 3.2:+69807718 | None:intergenic |
| ACAACTCATTGAACCATCAT+GGG | 0.576187 | 3.2:-69807731 | MS.gene25872:CDS |
| TATGGGATGCAATTAAACAA+TGG | 0.577797 | 3.2:-69808182 | MS.gene25872:CDS |
| AGGACCTGGAGTCACTGGAA+AGG | 0.579892 | 3.2:-69807557 | MS.gene25872:CDS |
| TCCAAGTGCATTTATCTGCA+AGG | 0.586289 | 3.2:+69808549 | None:intergenic |
| TACCAAATGATCTTCTACAC+CGG | 0.586393 | 3.2:-69808408 | MS.gene25872:intron |
| AGGTTGCTTGAATTTGCGAA+GGG | 0.588741 | 3.2:+69807812 | None:intergenic |
| ACCTTGCAGATAAATGCACT+TGG | 0.589225 | 3.2:-69808550 | MS.gene25872:CDS |
| AGATTGGTAGAATCAGAAGC+AGG | 0.591256 | 3.2:+69808834 | None:intergenic |
| TTCAATGGAATTGAGTTCTG+TGG | 0.597142 | 3.2:-69808467 | MS.gene25872:CDS |
| ACAAGGCACATTGAAGCCAC+TGG | 0.598697 | 3.2:-69808916 | MS.gene25872:CDS |
| AAGGTTGCTTGAATTTGCGA+AGG | 0.599155 | 3.2:+69807811 | None:intergenic |
| ATCAGATGAGGAATTTGCTA+GGG | 0.601114 | 3.2:-69809408 | MS.gene25872:CDS |
| TACCTTATGTAAGCAAAGTG+AGG | 0.601124 | 3.2:-69808992 | MS.gene25872:CDS |
| TTAGCAACTTTAATCAACCT+GGG | 0.603980 | 3.2:+69809619 | None:intergenic |
| ACCTTATGTAAGCAAAGTGA+GGG | 0.605287 | 3.2:-69808991 | MS.gene25872:CDS |
| TCAATGTGCCTTGTTTGGTG+AGG | 0.613172 | 3.2:+69808925 | None:intergenic |
| GCTTAGTACCTCTTCAACTG+TGG | 0.616160 | 3.2:+69809140 | None:intergenic |
| CTGATCAAGAGCTTCAAGCA+TGG | 0.620687 | 3.2:-69808110 | MS.gene25872:CDS |
| TAACTTGTAGATTGGATGCA+TGG | 0.623713 | 3.2:+69808594 | None:intergenic |
| TTTGCACAATATGCTTATGG+AGG | 0.625959 | 3.2:-69807949 | MS.gene25872:CDS |
| AAATAGCATCCAATTAGTCA+AGG | 0.636861 | 3.2:-69809363 | MS.gene25872:CDS |
| ATCAAGAGCTTCAAGCATGG+TGG | 0.642027 | 3.2:-69808107 | MS.gene25872:CDS |
| GATTCTAATTTACTTCTCAG+AGG | 0.642337 | 3.2:+69809231 | None:intergenic |
| TGCAAGGTATATCTGAGATG+TGG | 0.649204 | 3.2:+69808565 | None:intergenic |
| GAAGTTCGAACAAAAGGTCA+CGG | 0.654694 | 3.2:-69808081 | MS.gene25872:CDS |
| CTCGTGATAGCTGATTCTGG+TGG | 0.654841 | 3.2:+69809195 | None:intergenic |
| GTTCAAAATGGTCATCACCA+AGG | 0.657548 | 3.2:+69807792 | None:intergenic |
| TTGCTAGGGAGACTTTGGCA+GGG | 0.658261 | 3.2:-69809394 | MS.gene25872:CDS |
| CTAGTGAGCTCAATGACCAG+TGG | 0.660322 | 3.2:+69808900 | None:intergenic |
| TCACCAGATGAAGAGTACTT+GGG | 0.668317 | 3.2:-69807754 | MS.gene25872:CDS |
| GAAGATCCTAATGCACAACA+TGG | 0.692109 | 3.2:-69808255 | MS.gene25872:CDS |
| GCGACAAATCAGAAGAACCA+TGG | 0.695121 | 3.2:-69808059 | MS.gene25872:CDS |
| GCCTACAGAAGACCCTACAA+AGG | 0.701209 | 3.2:-69807887 | MS.gene25872:CDS |
| TTATTGGTGACAAACCACAA+TGG | 0.706609 | 3.2:-69808872 | MS.gene25872:CDS |
| TAGTGGTGATGATGTCAATG+AGG | 0.710309 | 3.2:+69808010 | None:intergenic |
| ACAAATCAGAAGAACCATGG+TGG | 0.737932 | 3.2:-69808056 | MS.gene25872:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAGTAATATAATAAATATT+TGG | + | chr3.2:69807894-69807913 | None:intergenic | 10.0% |
| !! | CAATAATTGTTACAAATATT+TGG | - | chr3.2:69808040-69808059 | MS.gene25872:CDS | 15.0% |
| !!! | TTAATTTGAATATTATATCC+AGG | - | chr3.2:69808317-69808336 | MS.gene25872:intron | 15.0% |
| !! | AAATTAGAATCCCAAATTTA+TGG | - | chr3.2:69808161-69808180 | MS.gene25872:CDS | 20.0% |
| !! | ATATAAAGATAGCATTTGAA+AGG | - | chr3.2:69809684-69809703 | MS.gene25872:CDS | 20.0% |
| !! | CAAATACTAATTTGAAGAAT+AGG | - | chr3.2:69809756-69809775 | MS.gene25872:intron | 20.0% |
| !! | GTATGATAATAAGTTCAAAA+TGG | + | chr3.2:69809603-69809622 | None:intergenic | 20.0% |
| !! | TAGAATCTTAGATTAAGTTA+TGG | - | chr3.2:69808283-69808302 | MS.gene25872:intron | 20.0% |
| !! | TTATATCATCTATGCTAATT+AGG | - | chr3.2:69808077-69808096 | MS.gene25872:CDS | 20.0% |
| !!! | CTTTACTAAAAAGTATTCAA+TGG | - | chr3.2:69808898-69808917 | MS.gene25872:CDS | 20.0% |
| !!! | TATATGTTGTTGATTTTTAC+AGG | - | chr3.2:69808705-69808724 | MS.gene25872:intron | 20.0% |
| !!! | TTTTACAAGTTATTTGAGTT+GGG | - | chr3.2:69807914-69807933 | MS.gene25872:CDS | 20.0% |
| ! | AAACAATTTCTTCTCTTGAA+TGG | + | chr3.2:69808343-69808362 | None:intergenic | 25.0% |
| ! | ACTAATTTGAAGAATAGGAA+TGG | - | chr3.2:69809761-69809780 | MS.gene25872:intron | 25.0% |
| ! | ATAGCATTTGAAAGGTTTAA+TGG | - | chr3.2:69809692-69809711 | MS.gene25872:CDS | 25.0% |
| ! | ATTCTCACTGATATAAATCT+TGG | - | chr3.2:69807638-69807657 | MS.gene25872:CDS | 25.0% |
| ! | CATAAGGTAGATATAAATCA+TGG | + | chr3.2:69808377-69808396 | None:intergenic | 25.0% |
| ! | GAGATTCTTATTAGTTCATA+TGG | - | chr3.2:69808857-69808876 | MS.gene25872:CDS | 25.0% |
| ! | GATATAGTGAGAGAAATTTA+GGG | + | chr3.2:69809060-69809079 | None:intergenic | 25.0% |
| ! | TAATTTAACATTGCTCCAAA+AGG | - | chr3.2:69807733-69807752 | MS.gene25872:CDS | 25.0% |
| ! | TAGCATTTGAAAGGTTTAAT+GGG | - | chr3.2:69809693-69809712 | MS.gene25872:CDS | 25.0% |
| ! | TCAAATGCTATCTTTATATC+TGG | + | chr3.2:69809683-69809702 | None:intergenic | 25.0% |
| ! | TGATATAGTGAGAGAAATTT+AGG | + | chr3.2:69809061-69809080 | None:intergenic | 25.0% |
| ! | TTCATTATGTTATGTAGGAA+TGG | - | chr3.2:69808126-69808145 | MS.gene25872:CDS | 25.0% |
| ! | TTGGAGCAATGTTAAATTAT+TGG | + | chr3.2:69807732-69807751 | None:intergenic | 25.0% |
| !! | GAAATCTTTTGTTCTTTTCT+TGG | - | chr3.2:69808099-69808118 | MS.gene25872:CDS | 25.0% |
| !! | GTGTTTTCATTATGTTATGT+AGG | - | chr3.2:69808121-69808140 | MS.gene25872:CDS | 25.0% |
| !! | GTTTTACAAGTTATTTGAGT+TGG | - | chr3.2:69807913-69807932 | MS.gene25872:CDS | 25.0% |
| !! | TCTTTTTGTGTTTTCAGATT+TGG | + | chr3.2:69809350-69809369 | None:intergenic | 25.0% |
| !!! | AAAAACAATTTTGGAATCCT+TGG | - | chr3.2:69807610-69807629 | MS.gene25872:CDS | 25.0% |
| !!! | TTGTTGATTTTTACAGGTTA+AGG | - | chr3.2:69808711-69808730 | MS.gene25872:intron | 25.0% |
| AAATAGCATCCAATTAGTCA+AGG | - | chr3.2:69808017-69808036 | MS.gene25872:CDS | 30.0% | |
| AACTTTGCACAATATGCTTA+TGG | - | chr3.2:69809428-69809447 | MS.gene25872:CDS | 30.0% | |
| AATGGTTTCATTAGCTCATA+AGG | + | chr3.2:69809800-69809819 | None:intergenic | 30.0% | |
| ATAGACGAACTTTACAAAGA+AGG | - | chr3.2:69807680-69807699 | MS.gene25872:CDS | 30.0% | |
| ATGGGATGCAATTAAACAAT+GGG | - | chr3.2:69809199-69809218 | MS.gene25872:CDS | 30.0% | |
| ATTAGCAACTTTAATCAACC+TGG | + | chr3.2:69807765-69807784 | None:intergenic | 30.0% | |
| CAATTATTGCCTTGACTAAT+TGG | + | chr3.2:69808029-69808048 | None:intergenic | 30.0% | |
| CATTTGTGATTGCAACAAAT+AGG | - | chr3.2:69808753-69808772 | MS.gene25872:intron | 30.0% | |
| GAAGAAATTCATGATACGTA+TGG | + | chr3.2:69809004-69809023 | None:intergenic | 30.0% | |
| GATTCTAATTTACTTCTCAG+AGG | + | chr3.2:69808152-69808171 | None:intergenic | 30.0% | |
| TATGGGATGCAATTAAACAA+TGG | - | chr3.2:69809198-69809217 | MS.gene25872:CDS | 30.0% | |
| TTAGCAACTTTAATCAACCT+GGG | + | chr3.2:69807764-69807783 | None:intergenic | 30.0% | |
| TTGACTAATTGGATGCTATT+TGG | + | chr3.2:69808018-69808037 | None:intergenic | 30.0% | |
| TTTCATTTACCATCATCTCT+TGG | - | chr3.2:69807704-69807723 | MS.gene25872:CDS | 30.0% | |
| ! | ATCATGTTTTACCTTGATTC+TGG | - | chr3.2:69808655-69808674 | MS.gene25872:CDS | 30.0% |
| ! | CTATTTGTTGCAATCACAAA+TGG | + | chr3.2:69808755-69808774 | None:intergenic | 30.0% |
| ! | CTCAGGAGTAAAAACAATTT+TGG | - | chr3.2:69807601-69807620 | MS.gene25872:CDS | 30.0% |
| ! | TGACTAATTGGATGCTATTT+GGG | + | chr3.2:69808017-69808036 | None:intergenic | 30.0% |
| !! | ATGTTGTTTCTAGCAATTGT+TGG | + | chr3.2:69809473-69809492 | None:intergenic | 30.0% |
| !! | GCAAATTGTTGTTCTTTTAG+AGG | - | chr3.2:69809092-69809111 | MS.gene25872:intron | 30.0% |
| !! | TTGTTGTTCTTTTAGAGGAA+TGG | - | chr3.2:69809097-69809116 | MS.gene25872:intron | 30.0% |
| !!! | CAAAATTGTTTTTACTCCTG+AGG | + | chr3.2:69807603-69807622 | None:intergenic | 30.0% |
| AACTTTAATCAACCTGGGAA+TGG | + | chr3.2:69807759-69807778 | None:intergenic | 35.0% | |
| AAGGTTTAATGGGAGATTGA+AGG | - | chr3.2:69809703-69809722 | MS.gene25872:CDS | 35.0% | |
| ACAACTCATTGAACCATCAT+GGG | - | chr3.2:69809649-69809668 | MS.gene25872:CDS | 35.0% | |
| ACCTTATGTAAGCAAAGTGA+GGG | - | chr3.2:69808389-69808408 | MS.gene25872:intron | 35.0% | |
| ATAGTGAGAGAAATTTAGGG+AGG | + | chr3.2:69809057-69809076 | None:intergenic | 35.0% | |
| ATGATACGTATGGACTTTAC+CGG | + | chr3.2:69808994-69809013 | None:intergenic | 35.0% | |
| CAATGATGGTCTTCTCATAT+GGG | - | chr3.2:69809181-69809200 | MS.gene25872:CDS | 35.0% | |
| CATGTTCTTACTCATGATAC+TGG | - | chr3.2:69808594-69808613 | MS.gene25872:CDS | 35.0% | |
| CTGAAGAATACTACACTGTA+TGG | - | chr3.2:69808414-69808433 | MS.gene25872:CDS | 35.0% | |
| CTTCTGATTCTACCAATCTT+TGG | - | chr3.2:69808550-69808569 | MS.gene25872:CDS | 35.0% | |
| GATACAATTCAACACAACCA+CGG | - | chr3.2:69807574-69807593 | MS.gene25872:CDS | 35.0% | |
| GATTCAATGATGCTTGGATT+TGG | + | chr3.2:69809251-69809270 | None:intergenic | 35.0% | |
| TACCAAATGATCTTCTACAC+CGG | - | chr3.2:69808972-69808991 | MS.gene25872:CDS | 35.0% | |
| TACCTTATGTAAGCAAAGTG+AGG | - | chr3.2:69808388-69808407 | MS.gene25872:intron | 35.0% | |
| TGATCAGATTCAATGATGCT+TGG | + | chr3.2:69809257-69809276 | None:intergenic | 35.0% | |
| TTATTGGATCCAAGAGATGA+TGG | + | chr3.2:69807716-69807735 | None:intergenic | 35.0% | |
| TTCAATGGAATTGAGTTCTG+TGG | - | chr3.2:69808913-69808932 | MS.gene25872:CDS | 35.0% | |
| TTTGCACAATATGCTTATGG+AGG | - | chr3.2:69809431-69809450 | MS.gene25872:intron | 35.0% | |
| ! | ATTCTACCAATCTTTGGCTT+TGG | - | chr3.2:69808556-69808575 | MS.gene25872:CDS | 35.0% |
| ! | ATTCTGGTGGACCATAAATT+TGG | + | chr3.2:69808175-69808194 | None:intergenic | 35.0% |
| ! | CTAGCAATTGTTGGTCTATT+AGG | + | chr3.2:69809464-69809483 | None:intergenic | 35.0% |
| ! | GAGCTAATGAAACCATTTTC+AGG | - | chr3.2:69809803-69809822 | MS.gene25872:intron | 35.0% |
| ! | GTGAAGATTTGTTTCCATTG+TGG | + | chr3.2:69808525-69808544 | None:intergenic | 35.0% |
| ! | TAACTTGTAGATTGGATGCA+TGG | + | chr3.2:69808789-69808808 | None:intergenic | 35.0% |
| ! | TAATTGGATGCTATTTGGGT+TGG | + | chr3.2:69808013-69808032 | None:intergenic | 35.0% |
| ! | TATCAAAGCGCAAAAGGTTT+TGG | + | chr3.2:69807793-69807812 | None:intergenic | 35.0% |
| ! | TATCAGATGAGGAATTTGCT+AGG | - | chr3.2:69807971-69807990 | MS.gene25872:CDS | 35.0% |
| ! | TGTGGTTTGTCACCAATAAT+AGG | + | chr3.2:69808507-69808526 | None:intergenic | 35.0% |
| ! | TTATTGGTGACAAACCACAA+TGG | - | chr3.2:69808508-69808527 | MS.gene25872:CDS | 35.0% |
| ! | TTCTGGTGGACCATAAATTT+GGG | + | chr3.2:69808174-69808193 | None:intergenic | 35.0% |
| !! | AGTCTTCAATTGCTAGCTTT+AGG | + | chr3.2:69809151-69809170 | None:intergenic | 35.0% |
| !! | ATCAGATGAGGAATTTGCTA+GGG | - | chr3.2:69807972-69807991 | MS.gene25872:CDS | 35.0% |
| !! | ATTCTTTTGGCTATCAGATG+AGG | - | chr3.2:69807960-69807979 | MS.gene25872:CDS | 35.0% |
| !! | CTTTGGCAATTTGATTTGCA+GGG | - | chr3.2:69808947-69808966 | MS.gene25872:CDS | 35.0% |
| AAGACCCTACAAAGGAAGAA+TGG | - | chr3.2:69809501-69809520 | MS.gene25872:intron | 40.0% | |
| AAGGTTGCTTGAATTTGCGA+AGG | + | chr3.2:69809572-69809591 | None:intergenic | 40.0% | |
| ACAAATCAGAAGAACCATGG+TGG | - | chr3.2:69809324-69809343 | MS.gene25872:intron | 40.0% | |
| ACATCATCACCACTATAGCT+TGG | - | chr3.2:69809378-69809397 | MS.gene25872:CDS | 40.0% | |
| ACCAGTGGCTTATAAGTTCA+TGG | + | chr3.2:69808623-69808642 | None:intergenic | 40.0% | |
| ACCATGAACTTATAAGCCAC+TGG | - | chr3.2:69808619-69808638 | MS.gene25872:CDS | 40.0% | |
| ACCTTGCAGATAAATGCACT+TGG | - | chr3.2:69808830-69808849 | MS.gene25872:CDS | 40.0% | |
| AGAAGACCATCATTGGCAAA+AGG | + | chr3.2:69809176-69809195 | None:intergenic | 40.0% | |
| AGACCCTACAAAGGAAGAAT+GGG | - | chr3.2:69809502-69809521 | MS.gene25872:intron | 40.0% | |
| AGATTGGTAGAATCAGAAGC+AGG | + | chr3.2:69808549-69808568 | None:intergenic | 40.0% | |
| AGGTTGCTTGAATTTGCGAA+GGG | + | chr3.2:69809571-69809590 | None:intergenic | 40.0% | |
| AGTACTCTTCATCTGGTGAA+TGG | + | chr3.2:69809625-69809644 | None:intergenic | 40.0% | |
| ATCAGTGAGAATTGTGTCCA+AGG | + | chr3.2:69807630-69807649 | None:intergenic | 40.0% | |
| ATTTCTTCTCTTGAATGGCC+TGG | + | chr3.2:69808338-69808357 | None:intergenic | 40.0% | |
| CATCATCACCACTATAGCTT+GGG | - | chr3.2:69809379-69809398 | MS.gene25872:CDS | 40.0% | |
| CCAATGATGGTCTTCTCATA+TGG | - | chr3.2:69809180-69809199 | MS.gene25872:CDS | 40.0% | |
| CCATATGAGAAGACCATCAT+TGG | + | chr3.2:69809183-69809202 | None:intergenic | 40.0% | |
| CTGTGGCATATGATAAGCTT+TGG | - | chr3.2:69808930-69808949 | MS.gene25872:CDS | 40.0% | |
| GAAGACCATCATTGGCAAAA+GGG | + | chr3.2:69809175-69809194 | None:intergenic | 40.0% | |
| GAAGATCCTAATGCACAACA+TGG | - | chr3.2:69809125-69809144 | MS.gene25872:intron | 40.0% | |
| GAAGTTCGAACAAAAGGTCA+CGG | - | chr3.2:69809299-69809318 | MS.gene25872:intron | 40.0% | |
| GACAACTCATTGAACCATCA+TGG | - | chr3.2:69809648-69809667 | MS.gene25872:CDS | 40.0% | |
| GAGCTCACTAGACCTATTAT+TGG | - | chr3.2:69808492-69808511 | MS.gene25872:CDS | 40.0% | |
| GATATGAATGTACTCACCAG+TGG | + | chr3.2:69808638-69808657 | None:intergenic | 40.0% | |
| GGGAGATTGAAGGAAATTGA+AGG | - | chr3.2:69809713-69809732 | MS.gene25872:CDS | 40.0% | |
| GTTCAAAATGGTCATCACCA+AGG | + | chr3.2:69809591-69809610 | None:intergenic | 40.0% | |
| TACCGGTGTAGAAGATCATT+TGG | + | chr3.2:69808977-69808996 | None:intergenic | 40.0% | |
| TCATATACTCGCCAGAATCA+AGG | + | chr3.2:69808669-69808688 | None:intergenic | 40.0% | |
| TCCAAGTGCATTTATCTGCA+AGG | + | chr3.2:69808834-69808853 | None:intergenic | 40.0% | |
| TCCCTCACTTTGCTTACATA+AGG | + | chr3.2:69808393-69808412 | None:intergenic | 40.0% | |
| TCTCCCATTCTTCCTTTGTA+GGG | + | chr3.2:69809508-69809527 | None:intergenic | 40.0% | |
| TGAAGAATAGGAATGGAGCT+GGG | - | chr3.2:69809768-69809787 | MS.gene25872:intron | 40.0% | |
| TGGACAGAAGTTCGAACAAA+AGG | - | chr3.2:69809293-69809312 | MS.gene25872:intron | 40.0% | |
| TGGTTATACCACAGTTGAAG+AGG | - | chr3.2:69808232-69808251 | MS.gene25872:CDS | 40.0% | |
| TTCGCAAATTCAAGCAACCT+TGG | - | chr3.2:69809571-69809590 | MS.gene25872:CDS | 40.0% | |
| TTCTCCCATTCTTCCTTTGT+AGG | + | chr3.2:69809509-69809528 | None:intergenic | 40.0% | |
| TTGAAGAATAGGAATGGAGC+TGG | - | chr3.2:69809767-69809786 | MS.gene25872:intron | 40.0% | |
| TTTAGGCCATGTTGTGCATT+AGG | + | chr3.2:69809134-69809153 | None:intergenic | 40.0% | |
| ! | GGATGCAGTAACTTGTAGAT+TGG | + | chr3.2:69808797-69808816 | None:intergenic | 40.0% |
| ! | GTGCAGGAGACAAATTCTTT+TGG | - | chr3.2:69807947-69807966 | MS.gene25872:CDS | 40.0% |
| ! | TAGTGGTGATGATGTCAATG+AGG | + | chr3.2:69809373-69809392 | None:intergenic | 40.0% |
| ! | TGAGGCTTTTGCTGAGATAA+AGG | - | chr3.2:69807550-69807569 | MS.gene25872:CDS | 40.0% |
| ! | TGCAAGGTATATCTGAGATG+TGG | + | chr3.2:69808818-69808837 | None:intergenic | 40.0% |
| !! | ATGAAACCATTTTCAGGACC+TGG | - | chr3.2:69809809-69809828 | MS.gene25872:intron | 40.0% |
| !! | GCTTTGGCAATTTGATTTGC+AGG | - | chr3.2:69808946-69808965 | MS.gene25872:CDS | 40.0% |
| !! | TCACCAGATGAAGAGTACTT+GGG | - | chr3.2:69809626-69809645 | MS.gene25872:CDS | 40.0% |
| !! | TTCACCAGATGAAGAGTACT+TGG | - | chr3.2:69809625-69809644 | MS.gene25872:CDS | 40.0% |
| !! | TTCTTTTAGAGGAATGGCTG+TGG | - | chr3.2:69809103-69809122 | MS.gene25872:intron | 40.0% |
| !!! | TGCTCGTTTTTAAGTGCTTC+TGG | + | chr3.2:69807818-69807837 | None:intergenic | 40.0% |
| AAGCCTCCAAAGCCAAAGAT+TGG | + | chr3.2:69808565-69808584 | None:intergenic | 45.0% | |
| AGATGCTACCCAAGCTATAG+TGG | + | chr3.2:69809390-69809409 | None:intergenic | 45.0% | |
| ATCAAGAGCTTCAAGCATGG+TGG | - | chr3.2:69809273-69809292 | MS.gene25872:intron | 45.0% | |
| CTGATCAAGAGCTTCAAGCA+TGG | - | chr3.2:69809270-69809289 | MS.gene25872:intron | 45.0% | |
| CTGTTCTTCCTCACCAAACA+AGG | - | chr3.2:69808447-69808466 | MS.gene25872:CDS | 45.0% | |
| GCGACAAATCAGAAGAACCA+TGG | - | chr3.2:69809321-69809340 | MS.gene25872:intron | 45.0% | |
| GCTTAGTACCTCTTCAACTG+TGG | + | chr3.2:69808243-69808262 | None:intergenic | 45.0% | |
| GTCATCGAGTCGCAGATAAT+TGG | - | chr3.2:69808212-69808231 | MS.gene25872:CDS | 45.0% | |
| TCCTTTGTAGGGTCTTCTGT+AGG | + | chr3.2:69809497-69809516 | None:intergenic | 45.0% | |
| TCTGGATTCTCATCCCATGA+TGG | + | chr3.2:69809665-69809684 | None:intergenic | 45.0% | |
| TGTCCCAAGTACTCTTCATC+TGG | + | chr3.2:69809632-69809651 | None:intergenic | 45.0% | |
| ! | CAAGCCTGAGCAAACACTTT+TGG | - | chr3.2:69809538-69809557 | MS.gene25872:intron | 45.0% |
| ! | CTGGAGTATCAAAGCGCAAA+AGG | + | chr3.2:69807799-69807818 | None:intergenic | 45.0% |
| ! | GACTACCCTTTTGCCAATGA+TGG | - | chr3.2:69809167-69809186 | MS.gene25872:CDS | 45.0% |
| ! | GTTTTCAGATTTGGCCACCA+TGG | + | chr3.2:69809341-69809360 | None:intergenic | 45.0% |
| ! | TCTCTCGTGATAGCTGATTC+TGG | + | chr3.2:69808191-69808210 | None:intergenic | 45.0% |
| ! | TGGCTTCAATGTGCCTTGTT+TGG | + | chr3.2:69808463-69808482 | None:intergenic | 45.0% |
| !! | CACTCCAAAAGTGTTTGCTC+AGG | + | chr3.2:69809545-69809564 | None:intergenic | 45.0% |
| !! | CTACCAATCTTTGGCTTTGG+AGG | - | chr3.2:69808559-69808578 | MS.gene25872:CDS | 45.0% |
| !! | GGAATTTGCTAGGGAGACTT+TGG | - | chr3.2:69807981-69808000 | MS.gene25872:CDS | 45.0% |
| !! | TCAATGTGCCTTGTTTGGTG+AGG | + | chr3.2:69808458-69808477 | None:intergenic | 45.0% |
| !!! | GTTGGGAACTTTTGAAGTGC+AGG | - | chr3.2:69807931-69807950 | MS.gene25872:CDS | 45.0% |
| ACAAGGCACATTGAAGCCAC+TGG | - | chr3.2:69808464-69808483 | MS.gene25872:CDS | 50.0% | |
| CTAGTGAGCTCAATGACCAG+TGG | + | chr3.2:69808483-69808502 | None:intergenic | 50.0% | |
| GCCTACAGAAGACCCTACAA+AGG | - | chr3.2:69809493-69809512 | MS.gene25872:intron | 50.0% | |
| GTGACTCCAGGTCCTGAAAA+TGG | + | chr3.2:69809818-69809837 | None:intergenic | 50.0% | |
| TGTCTATGTTCCTCGCGATG+AGG | - | chr3.2:69807532-69807551 | MS.gene25872:CDS | 50.0% | |
| TTGCTAGGGAGACTTTGGCA+GGG | - | chr3.2:69807986-69808005 | MS.gene25872:CDS | 50.0% | |
| TTTGCTAGGGAGACTTTGGC+AGG | - | chr3.2:69807985-69808004 | MS.gene25872:CDS | 50.0% | |
| ! | CTCGTGATAGCTGATTCTGG+TGG | + | chr3.2:69808188-69808207 | None:intergenic | 50.0% |
| ! | TCAACCTGGGAATGGCCTTT+TGG | + | chr3.2:69807751-69807770 | None:intergenic | 50.0% |
| !! | TTTTCAGGACCTGGAGTCAC+TGG | - | chr3.2:69809818-69809837 | MS.gene25872:intron | 50.0% |
| ACTCCCTTTCCAGTGACTCC+AGG | + | chr3.2:69809830-69809849 | None:intergenic | 55.0% | |
| AGGACCTGGAGTCACTGGAA+AGG | - | chr3.2:69809823-69809842 | MS.gene25872:intron | 55.0% | |
| GGACCTGGAGTCACTGGAAA+GGG | - | chr3.2:69809824-69809843 | MS.gene25872:intron | 55.0% | |
| TCAGCAAAAGCCTCATCGCG+AGG | + | chr3.2:69807545-69807564 | None:intergenic | 55.0% | |
| TGCTAGGGAGACTTTGGCAG+GGG | - | chr3.2:69807987-69808006 | MS.gene25872:CDS | 55.0% | |
| TGCTCCAAAAGGCCATTCCC+AGG | - | chr3.2:69807744-69807763 | MS.gene25872:CDS | 55.0% | |
| ! | TTTTACTCCTGAGGACGCCG+TGG | + | chr3.2:69807594-69807613 | None:intergenic | 55.0% |
| AACACAACCACGGCGTCCTC+AGG | - | chr3.2:69807584-69807603 | MS.gene25872:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 69807531 | 69809871 | 69807531 | ID=MS.gene25872 |
| chr3.2 | mRNA | 69807531 | 69809871 | 69807531 | ID=MS.gene25872.t1;Parent=MS.gene25872 |
| chr3.2 | exon | 69809864 | 69809871 | 69809864 | ID=MS.gene25872.t1.exon1;Parent=MS.gene25872.t1 |
| chr3.2 | CDS | 69809864 | 69809871 | 69809864 | ID=cds.MS.gene25872.t1;Parent=MS.gene25872.t1 |
| chr3.2 | exon | 69809545 | 69809732 | 69809545 | ID=MS.gene25872.t1.exon2;Parent=MS.gene25872.t1 |
| chr3.2 | CDS | 69809545 | 69809732 | 69809545 | ID=cds.MS.gene25872.t1;Parent=MS.gene25872.t1 |
| chr3.2 | exon | 69809355 | 69809449 | 69809355 | ID=MS.gene25872.t1.exon3;Parent=MS.gene25872.t1 |
| chr3.2 | CDS | 69809355 | 69809449 | 69809355 | ID=cds.MS.gene25872.t1;Parent=MS.gene25872.t1 |
| chr3.2 | exon | 69809149 | 69809259 | 69809149 | ID=MS.gene25872.t1.exon4;Parent=MS.gene25872.t1 |
| chr3.2 | CDS | 69809149 | 69809259 | 69809149 | ID=cds.MS.gene25872.t1;Parent=MS.gene25872.t1 |
| chr3.2 | exon | 69808762 | 69809063 | 69808762 | ID=MS.gene25872.t1.exon5;Parent=MS.gene25872.t1 |
| chr3.2 | CDS | 69808762 | 69809063 | 69808762 | ID=cds.MS.gene25872.t1;Parent=MS.gene25872.t1 |
| chr3.2 | exon | 69808409 | 69808675 | 69808409 | ID=MS.gene25872.t1.exon6;Parent=MS.gene25872.t1 |
| chr3.2 | CDS | 69808409 | 69808675 | 69808409 | ID=cds.MS.gene25872.t1;Parent=MS.gene25872.t1 |
| chr3.2 | exon | 69807531 | 69808290 | 69807531 | ID=MS.gene25872.t1.exon7;Parent=MS.gene25872.t1 |
| chr3.2 | CDS | 69807531 | 69808290 | 69807531 | ID=cds.MS.gene25872.t1;Parent=MS.gene25872.t1 |
| Gene Sequence |
| Protein sequence |
