Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25873.t1 | XP_003601325.2 | 96.4 | 841 | 29 | 1 | 1 | 841 | 63 | 902 | 0.00E+00 | 1650.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25873.t1 | O24370 | 59.1 | 839 | 335 | 8 | 8 | 841 | 64 | 899 | 5.2e-297 | 1021.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25873.t1 | G7J632 | 96.4 | 841 | 29 | 1 | 1 | 841 | 63 | 902 | 0.0e+00 | 1650.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050520 | MS.gene25873 | 0.841481 | 4.63E-58 | -1.69E-46 |
MS.gene051387 | MS.gene25873 | 0.817296 | 3.55E-52 | -1.69E-46 |
MS.gene053207 | MS.gene25873 | 0.806823 | 6.82E-50 | -1.69E-46 |
MS.gene053436 | MS.gene25873 | 0.801914 | 7.19E-49 | -1.69E-46 |
MS.gene054595 | MS.gene25873 | 0.812219 | 4.73E-51 | -1.69E-46 |
MS.gene057416 | MS.gene25873 | 0.8003 | 1.54E-48 | -1.69E-46 |
MS.gene060482 | MS.gene25873 | 0.800494 | 1.40E-48 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25873.t1 | MTR_3g079450 | 96.671 | 841 | 27 | 1 | 1 | 841 | 63 | 902 | 0.0 | 1691 |
MS.gene25873.t1 | MTR_3g479460 | 78.266 | 842 | 181 | 2 | 1 | 841 | 63 | 903 | 0.0 | 1408 |
MS.gene25873.t1 | MTR_3g079420 | 80.401 | 847 | 154 | 4 | 6 | 841 | 20 | 865 | 0.0 | 1382 |
MS.gene25873.t1 | MTR_3g079450 | 96.435 | 589 | 20 | 1 | 1 | 589 | 63 | 650 | 0.0 | 1176 |
MS.gene25873.t1 | MTR_4g066170 | 61.290 | 837 | 308 | 8 | 16 | 841 | 75 | 906 | 0.0 | 1082 |
MS.gene25873.t1 | MTR_8g020970 | 47.965 | 811 | 405 | 10 | 41 | 840 | 122 | 926 | 0.0 | 802 |
MS.gene25873.t1 | MTR_8g080230 | 47.512 | 844 | 418 | 13 | 16 | 841 | 80 | 916 | 0.0 | 791 |
MS.gene25873.t1 | MTR_1g104650 | 44.015 | 827 | 429 | 15 | 40 | 841 | 39 | 856 | 0.0 | 676 |
MS.gene25873.t1 | MTR_1g083020 | 45.032 | 775 | 410 | 9 | 76 | 841 | 91 | 858 | 0.0 | 668 |
MS.gene25873.t1 | MTR_4g088810 | 42.199 | 846 | 442 | 15 | 12 | 840 | 79 | 894 | 0.0 | 667 |
MS.gene25873.t1 | MTR_2g099570 | 42.063 | 863 | 459 | 16 | 3 | 841 | 16 | 861 | 0.0 | 667 |
MS.gene25873.t1 | MTR_8g018420 | 43.690 | 840 | 427 | 19 | 26 | 841 | 39 | 856 | 0.0 | 659 |
MS.gene25873.t1 | MTR_8g018735 | 41.596 | 827 | 448 | 14 | 32 | 841 | 57 | 865 | 0.0 | 649 |
MS.gene25873.t1 | MTR_2g099560 | 42.805 | 827 | 446 | 14 | 29 | 841 | 50 | 863 | 0.0 | 647 |
MS.gene25873.t1 | MTR_8g018730 | 41.458 | 837 | 450 | 14 | 28 | 841 | 45 | 864 | 0.0 | 647 |
MS.gene25873.t1 | MTR_8g018690 | 42.563 | 827 | 441 | 15 | 30 | 841 | 58 | 865 | 0.0 | 645 |
MS.gene25873.t1 | MTR_8g018570 | 42.548 | 832 | 447 | 16 | 27 | 841 | 53 | 870 | 0.0 | 643 |
MS.gene25873.t1 | MTR_8g018510 | 44.574 | 774 | 404 | 14 | 79 | 841 | 110 | 869 | 0.0 | 640 |
MS.gene25873.t1 | MTR_7g113410 | 42.476 | 824 | 447 | 14 | 37 | 841 | 52 | 867 | 0.0 | 639 |
MS.gene25873.t1 | MTR_8g020990 | 42.410 | 830 | 449 | 15 | 27 | 841 | 53 | 868 | 0.0 | 638 |
MS.gene25873.t1 | MTR_8g018520 | 44.373 | 773 | 407 | 14 | 79 | 841 | 109 | 868 | 0.0 | 637 |
MS.gene25873.t1 | MTR_8g018430 | 41.763 | 862 | 468 | 15 | 2 | 841 | 12 | 861 | 0.0 | 634 |
MS.gene25873.t1 | MTR_8g018730 | 41.127 | 834 | 427 | 14 | 28 | 841 | 45 | 834 | 0.0 | 629 |
MS.gene25873.t1 | MTR_5g024020 | 40.094 | 848 | 467 | 15 | 16 | 841 | 39 | 867 | 0.0 | 628 |
MS.gene25873.t1 | MTR_8g018550 | 41.686 | 866 | 465 | 16 | 3 | 841 | 16 | 868 | 0.0 | 619 |
MS.gene25873.t1 | MTR_3g081130 | 40.311 | 836 | 461 | 15 | 28 | 841 | 39 | 858 | 0.0 | 616 |
MS.gene25873.t1 | MTR_8g018450 | 40.328 | 853 | 462 | 16 | 1 | 841 | 11 | 828 | 0.0 | 615 |
MS.gene25873.t1 | MTR_8g018690 | 41.354 | 827 | 431 | 16 | 30 | 841 | 58 | 845 | 0.0 | 615 |
MS.gene25873.t1 | MTR_3g081130 | 41.677 | 775 | 431 | 12 | 75 | 841 | 25 | 786 | 0.0 | 605 |
MS.gene25873.t1 | MTR_5g024020 | 38.443 | 848 | 445 | 15 | 16 | 841 | 39 | 831 | 0.0 | 591 |
MS.gene25873.t1 | MTR_8g018590 | 42.126 | 762 | 398 | 15 | 93 | 841 | 92 | 823 | 0.0 | 572 |
MS.gene25873.t1 | MTR_8g018650 | 42.216 | 758 | 388 | 10 | 86 | 841 | 98 | 807 | 0.0 | 554 |
MS.gene25873.t1 | MTR_8g018620 | 41.787 | 761 | 387 | 12 | 86 | 841 | 98 | 807 | 0.0 | 550 |
MS.gene25873.t1 | MTR_8g011340 | 38.957 | 729 | 421 | 13 | 79 | 796 | 107 | 822 | 0.0 | 545 |
MS.gene25873.t1 | MTR_8g020970 | 46.774 | 558 | 285 | 7 | 41 | 589 | 122 | 676 | 2.45e-178 | 529 |
MS.gene25873.t1 | MTR_8g018730 | 42.589 | 587 | 315 | 10 | 264 | 841 | 11 | 584 | 2.62e-161 | 482 |
MS.gene25873.t1 | MTR_8g018735 | 40.909 | 572 | 305 | 13 | 35 | 589 | 60 | 615 | 1.47e-135 | 417 |
MS.gene25873.t1 | MTR_6g452500 | 36.106 | 601 | 360 | 13 | 232 | 824 | 21 | 605 | 5.47e-126 | 392 |
MS.gene25873.t1 | MTR_8g021020 | 43.160 | 424 | 235 | 4 | 421 | 841 | 11 | 431 | 3.66e-113 | 352 |
MS.gene25873.t1 | MTR_8g463810 | 57.759 | 232 | 34 | 2 | 394 | 625 | 190 | 357 | 1.94e-76 | 254 |
MS.gene25873.t1 | MTR_7g012030 | 73.109 | 119 | 32 | 0 | 491 | 609 | 85 | 203 | 3.96e-59 | 200 |
MS.gene25873.t1 | MTR_6g046330 | 66.154 | 130 | 33 | 1 | 491 | 609 | 75 | 204 | 2.13e-53 | 188 |
MS.gene25873.t1 | MTR_2g067130 | 53.684 | 95 | 40 | 2 | 4 | 95 | 2 | 95 | 1.31e-18 | 84.0 |
MS.gene25873.t1 | MTR_4g088805 | 47.253 | 91 | 47 | 1 | 751 | 840 | 1 | 91 | 1.29e-16 | 76.3 |
MS.gene25873.t1 | MTR_5g052190 | 73.469 | 49 | 7 | 1 | 228 | 276 | 45 | 87 | 5.55e-12 | 70.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25873.t1 | AT3G45140 | 53.713 | 808 | 358 | 7 | 38 | 841 | 101 | 896 | 0.0 | 914 |
MS.gene25873.t1 | AT3G45140 | 55.453 | 761 | 328 | 6 | 85 | 841 | 1 | 754 | 0.0 | 894 |
MS.gene25873.t1 | AT1G72520 | 47.986 | 844 | 412 | 15 | 16 | 841 | 92 | 926 | 0.0 | 809 |
MS.gene25873.t1 | AT1G17420 | 46.793 | 842 | 424 | 11 | 16 | 841 | 86 | 919 | 0.0 | 792 |
MS.gene25873.t1 | AT1G67560 | 46.543 | 810 | 415 | 12 | 43 | 841 | 115 | 917 | 0.0 | 748 |
MS.gene25873.t1 | AT1G55020 | 46.537 | 823 | 410 | 14 | 37 | 841 | 49 | 859 | 0.0 | 707 |
MS.gene25873.t1 | AT3G22400 | 43.192 | 852 | 448 | 15 | 17 | 841 | 44 | 886 | 0.0 | 679 |
Find 164 sgRNAs with CRISPR-Local
Find 379 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACTCATTCCAAAGTTCTTTA+AGG | 0.084556 | 3.2:+69804536 | MS.gene25873:CDS |
CTAGCAATTGTTGGTCTATT+AGG | 0.092716 | 3.2:-69806275 | None:intergenic |
CATGTTCTTGTTCATGATTC+TGG | 0.145766 | 3.2:+69805363 | MS.gene25873:CDS |
CCAATGACGGTCTTCTAATA+TGG | 0.163070 | 3.2:+69805994 | MS.gene25873:CDS |
TTTGAGTTACCAGCAAATTT+TGG | 0.176746 | 3.2:+69802772 | MS.gene25873:CDS |
AACTTACTCTTGTATGGTTC+CGG | 0.228161 | 3.2:-69804597 | None:intergenic |
TTAACCAATTGGATGCTATA+TGG | 0.237885 | 3.2:-69804781 | None:intergenic |
GTGGCCTTTGAAAAGTAAAT+TGG | 0.239348 | 3.2:+69804911 | MS.gene25873:CDS |
ATCAGTGACTATTGCGTCTA+AGG | 0.241076 | 3.2:-69804412 | None:intergenic |
TGGAAATGTGGGTGCTGTTT+TGG | 0.252907 | 3.2:+69802792 | MS.gene25873:CDS |
TGGTAACAAACACTTAATTT+TGG | 0.253312 | 3.2:+69800796 | MS.gene25873:CDS |
TGTACCAAACTAGGTTTAAA+TGG | 0.259190 | 3.2:-69806678 | None:intergenic |
CTGTGTGTTGCAATTATAAT+AGG | 0.269350 | 3.2:-69805517 | None:intergenic |
CCAACCAGAGCAAACACTTT+TGG | 0.289754 | 3.2:+69806352 | MS.gene25873:CDS |
TAGCAATTGTTGGTCTATTA+GGG | 0.301680 | 3.2:-69806274 | None:intergenic |
GTGACTCCAGGCCCTGAAAA+TGG | 0.302315 | 3.2:-69806629 | None:intergenic |
TCTTTGGCAATTTGATTTGC+AGG | 0.304593 | 3.2:+69805711 | MS.gene25873:CDS |
GTGAAGAAAACTCTCTTTGT+AGG | 0.307177 | 3.2:-69802928 | None:intergenic |
CTAAAGAATATAGTCCTTGA+TGG | 0.311025 | 3.2:+69802844 | MS.gene25873:CDS |
GAGTCATTGGATTCAAGATT+TGG | 0.317623 | 3.2:-69804498 | None:intergenic |
ATTCTGATTCCACCAATATC+TGG | 0.318341 | 3.2:+69805319 | MS.gene25873:CDS |
TTTACACAATATGCTTATAT+AGG | 0.319058 | 3.2:+69806245 | MS.gene25873:CDS |
ATTCTGGTGGACCATAGATT+TGG | 0.321973 | 3.2:-69804938 | None:intergenic |
TTCACTCCATGTTGTGCATT+AGG | 0.341211 | 3.2:-69805945 | None:intergenic |
GTGCGACAGCGTCTAGGATA+TGG | 0.341556 | 3.2:-69804079 | None:intergenic |
TCGAAGGGAGAGACAATAAA+AGG | 0.356789 | 3.2:+69802697 | MS.gene25873:CDS |
TCTCTAGTAATTGCTGATTC+TGG | 0.358260 | 3.2:-69804954 | None:intergenic |
CTCATCAAGAATATTGTTAC+TGG | 0.359156 | 3.2:+69800767 | MS.gene25873:CDS |
CTCAGCTTTCTTAATCCACT+TGG | 0.360020 | 3.2:-69803905 | None:intergenic |
TTAAGGTGGACCGGGCCATC+AGG | 0.361255 | 3.2:-69802871 | None:intergenic |
CTGTGGCATATGATAATCTT+TGG | 0.361879 | 3.2:+69805695 | MS.gene25873:CDS |
AGGAATTTGAAGAATAGAAA+TGG | 0.362166 | 3.2:+69806575 | MS.gene25873:CDS |
ACTTACTCTTGTATGGTTCC+GGG | 0.363410 | 3.2:-69804596 | None:intergenic |
TGTTTGAACTTACTCTTGTA+TGG | 0.364028 | 3.2:-69804603 | None:intergenic |
TGTCCAATGTACTCTTCATC+TGG | 0.364172 | 3.2:-69806443 | None:intergenic |
AATACTTCTGCCGTATCTTT+AGG | 0.368151 | 3.2:+69804369 | MS.gene25873:CDS |
TTGGAGAAAATTCGAGTCAT+TGG | 0.368346 | 3.2:-69804511 | None:intergenic |
ATAGTCACTGATATAAATCT+TGG | 0.370327 | 3.2:+69804423 | MS.gene25873:CDS |
CCCACATTTCCAAAATTTGC+TGG | 0.375304 | 3.2:-69802781 | None:intergenic |
ATTGAGGGAACAACACTATA+TGG | 0.375357 | 3.2:+69805183 | MS.gene25873:CDS |
TTAGCATCCTTAAAGAACTT+TGG | 0.376602 | 3.2:-69804543 | None:intergenic |
TCAATATTCCTTCACTAGTA+AGG | 0.377393 | 3.2:-69805224 | None:intergenic |
AATATTGTTACTGGTATTGT+TGG | 0.378392 | 3.2:+69800776 | MS.gene25873:CDS |
TCGAAAAGAATGATATTTCA+AGG | 0.387741 | 3.2:-69805648 | None:intergenic |
GGGTGAGAATTCAACTATAA+AGG | 0.389284 | 3.2:+69806484 | MS.gene25873:CDS |
ATATTGGTGGAATCAGAATT+AGG | 0.390188 | 3.2:-69805315 | None:intergenic |
GACCTCAAAAGACCTGTTCT+TGG | 0.394205 | 3.2:+69804040 | MS.gene25873:CDS |
GAATCCATGATTGACAATTA+AGG | 0.395271 | 3.2:-69802888 | None:intergenic |
TACCTACTGATAAGATCATT+TGG | 0.395434 | 3.2:-69805739 | None:intergenic |
GTACTCCTTTCTTCATATAG+TGG | 0.399010 | 3.2:-69804288 | None:intergenic |
CATTGTGCCTTGCCATCAAT+AGG | 0.401726 | 3.2:-69805276 | None:intergenic |
GGTCGAAAGCATTCTGATAC+AGG | 0.402041 | 3.2:+69804103 | MS.gene25873:CDS |
CCACCAATATCTGGCTTTGG+AGG | 0.402930 | 3.2:+69805328 | MS.gene25873:CDS |
AAGCCTCCAAAGCCAGATAT+TGG | 0.404646 | 3.2:-69805331 | None:intergenic |
TAACCAATTGGATGCTATAT+GGG | 0.408073 | 3.2:-69804780 | None:intergenic |
ATTCCACCAATATCTGGCTT+TGG | 0.411670 | 3.2:+69805325 | MS.gene25873:CDS |
AAATTGGATGCCCAAATCTA+TGG | 0.413135 | 3.2:+69804927 | MS.gene25873:CDS |
TTGAGGTCAGTGGTTATGTC+AGG | 0.413159 | 3.2:-69804025 | None:intergenic |
TCCACCTTAATTGTCAATCA+TGG | 0.416550 | 3.2:+69802884 | MS.gene25873:CDS |
CCATATTAGAAGACCGTCAT+TGG | 0.419135 | 3.2:-69805994 | None:intergenic |
CATTCCAAAAGTGTTTGCTC+TGG | 0.419934 | 3.2:-69806356 | None:intergenic |
TTCTGGTGGACCATAGATTT+GGG | 0.421786 | 3.2:-69804937 | None:intergenic |
GTTTAAATGGATATGCTGTA+TGG | 0.426545 | 3.2:-69806665 | None:intergenic |
GTCCTTGATGGTTTCCCTGA+TGG | 0.427910 | 3.2:+69802856 | MS.gene25873:CDS |
TTGTAGGGGATAGATTCTTT+TGG | 0.428079 | 3.2:+69804713 | MS.gene25873:intron |
CTCACTAGACCACCTATTGA+TGG | 0.432807 | 3.2:+69805264 | MS.gene25873:CDS |
CCAAAAGTGTTTGCTCTGGT+TGG | 0.436594 | 3.2:-69806352 | None:intergenic |
GAATTTCTGTCCACCATGCT+TGG | 0.436612 | 3.2:-69806097 | None:intergenic |
TCCTTAGTAGGGTCTTCTGT+TGG | 0.439100 | 3.2:-69806308 | None:intergenic |
TTTGTAGGAGTATCATGCTT+AGG | 0.439282 | 3.2:-69802913 | None:intergenic |
TTTCCCATTCTTCCTTAGTA+GGG | 0.440122 | 3.2:-69806319 | None:intergenic |
TCTAGGATATGGATATTGTT+TGG | 0.442196 | 3.2:-69804068 | None:intergenic |
ATGTCCATGCCTTAACCAAT+TGG | 0.451067 | 3.2:-69804792 | None:intergenic |
AAGACCCTACTAAGGAAGAA+TGG | 0.454559 | 3.2:+69806315 | MS.gene25873:CDS |
TCTCTCAGTTTGCTAACATA+TGG | 0.455221 | 3.2:-69805159 | None:intergenic |
ATGGGATGCAATTAAACAAT+GGG | 0.457493 | 3.2:+69806013 | MS.gene25873:CDS |
GGGCCTGGAGTCACTGGAAA+AGG | 0.458638 | 3.2:+69806638 | MS.gene25873:CDS |
ATAGAAGCAATTTACAAAGA+AGG | 0.458987 | 3.2:+69804465 | MS.gene25873:CDS |
ATGAACAAGAACATGAGCTT+TGG | 0.461543 | 3.2:-69805355 | None:intergenic |
TAGACTCAAGGAATGAAGAT+AGG | 0.461905 | 3.2:+69806555 | MS.gene25873:CDS |
TATGACGTCTACAATGATCT+TGG | 0.466404 | 3.2:+69803998 | MS.gene25873:CDS |
TGTTTGGTGCCACCAAGAAC+AGG | 0.467750 | 3.2:-69804052 | None:intergenic |
GGCACCAGCCAAAGTCTCTC+TGG | 0.472557 | 3.2:-69804755 | None:intergenic |
CAATGACGGTCTTCTAATAT+GGG | 0.476498 | 3.2:+69805995 | MS.gene25873:CDS |
CTAATAGAACTAAGAGGGAA+TGG | 0.477908 | 3.2:+69803938 | MS.gene25873:CDS |
ATATAGCATCCAATTGGTTA+AGG | 0.478204 | 3.2:+69804783 | MS.gene25873:CDS |
GATGAGCTAATAGAACTAAG+AGG | 0.478619 | 3.2:+69803932 | MS.gene25873:CDS |
AGACCCTACTAAGGAAGAAT+GGG | 0.480218 | 3.2:+69806316 | MS.gene25873:CDS |
TGATGGTTTCCCTGATGGCC+CGG | 0.480524 | 3.2:+69802861 | MS.gene25873:CDS |
TTTGCCAGAGAGACTTTGGC+TGG | 0.481032 | 3.2:+69804751 | MS.gene25873:CDS |
ATAAGAGTAGTGATGGCAAA+AGG | 0.486600 | 3.2:+69800671 | None:intergenic |
AATGGCTTTAAAGACTCATA+AGG | 0.490739 | 3.2:-69806611 | None:intergenic |
TAGTCACTGATATAAATCTT+GGG | 0.491052 | 3.2:+69804424 | MS.gene25873:CDS |
GGAATTTGCCAGAGAGACTT+TGG | 0.496070 | 3.2:+69804747 | MS.gene25873:CDS |
TAGCAAACTGAGAGAGATTG+AGG | 0.496616 | 3.2:+69805167 | MS.gene25873:CDS |
CTAGTAATTGCTGATTCTGG+TGG | 0.502077 | 3.2:-69804951 | None:intergenic |
CAACCCATATAGCATCCAAT+TGG | 0.511275 | 3.2:+69804777 | MS.gene25873:CDS |
GATTCAAGTATGTCTGAGCT+TGG | 0.512444 | 3.2:-69806062 | None:intergenic |
GATTGACAATTAAGGTGGAC+CGG | 0.512595 | 3.2:-69802880 | None:intergenic |
TACTCCTTTCTTCATATAGT+GGG | 0.517291 | 3.2:-69804287 | None:intergenic |
AGAAGACCGTCATTGGCAAA+AGG | 0.518247 | 3.2:-69805987 | None:intergenic |
AGATGCTGTCCAAGCTATAG+TGG | 0.518404 | 3.2:-69806201 | None:intergenic |
AATGTTGCTTGAATTTGTGA+TGG | 0.521479 | 3.2:-69806383 | None:intergenic |
AGGAGATTGAATGAAATTGA+AGG | 0.525552 | 3.2:+69806527 | MS.gene25873:CDS |
ACATCATTACCACTATAGCT+TGG | 0.532589 | 3.2:+69806192 | MS.gene25873:CDS |
GAACTAAGAGGGAATGGAGA+AGG | 0.533603 | 3.2:+69803944 | MS.gene25873:CDS |
CTCAAAAGACCTGTTCTTGG+TGG | 0.540243 | 3.2:+69804043 | MS.gene25873:CDS |
TTTAAATGGATATGCTGTAT+GGG | 0.542203 | 3.2:-69806664 | None:intergenic |
AACTTACAGCACAGTTGAAG+AGG | 0.543581 | 3.2:+69804998 | MS.gene25873:CDS |
GCCAACAGAAGACCCTACTA+AGG | 0.544940 | 3.2:+69806307 | MS.gene25873:CDS |
CAGACCCACTATATGAAGAA+AGG | 0.547760 | 3.2:+69804283 | MS.gene25873:intron |
CAATTGGATGCTATATGGGT+TGG | 0.548678 | 3.2:-69804776 | None:intergenic |
AATCCACTTGGTGTTTGTGA+TGG | 0.549751 | 3.2:-69803893 | None:intergenic |
TGTAGTCAAGCCTAAAGATA+CGG | 0.551843 | 3.2:-69804379 | None:intergenic |
CGACCGGTGCGACAGCGTCT+AGG | 0.553844 | 3.2:-69804085 | None:intergenic |
CGCAACTTTATTGATCTCCA+TGG | 0.555615 | 3.2:-69805596 | None:intergenic |
GGCCATCAGGGAAACCATCA+AGG | 0.563223 | 3.2:-69802858 | None:intergenic |
TAAGGTGGACCGGGCCATCA+GGG | 0.564095 | 3.2:-69802870 | None:intergenic |
TATGGGATGCAATTAAACAA+TGG | 0.570977 | 3.2:+69806012 | MS.gene25873:CDS |
TTGAAGAATAGAAATGGAGC+TGG | 0.572230 | 3.2:+69806581 | MS.gene25873:CDS |
CCTCCAAAGCCAGATATTGG+TGG | 0.572821 | 3.2:-69805328 | None:intergenic |
TATCCTAGACGCTGTCGCAC+CGG | 0.575164 | 3.2:+69804082 | MS.gene25873:CDS |
TTGAAGGTATTATAGACTCA+AGG | 0.576809 | 3.2:+69806543 | MS.gene25873:CDS |
ATGAGCTAATAGAACTAAGA+GGG | 0.582546 | 3.2:+69803933 | MS.gene25873:CDS |
CTTACTCTTGTATGGTTCCG+GGG | 0.587013 | 3.2:-69804595 | None:intergenic |
GTTGAATTCTCACCCCAAGA+TGG | 0.587735 | 3.2:-69806476 | None:intergenic |
AGCAAACTGAGAGAGATTGA+GGG | 0.591240 | 3.2:+69805168 | MS.gene25873:CDS |
GAAGTTCTCATTAATGCAAG+TGG | 0.591680 | 3.2:+69805622 | MS.gene25873:CDS |
ATCATGAGCTAATAAGCCAT+TGG | 0.594756 | 3.2:+69805388 | MS.gene25873:CDS |
TGTATCAGAATGCTTTCGAC+CGG | 0.595298 | 3.2:-69804101 | None:intergenic |
TAGACCACCTATTGATGGCA+AGG | 0.603643 | 3.2:+69805269 | MS.gene25873:CDS |
TTACCATCACAAACACCAAG+TGG | 0.605695 | 3.2:+69803890 | MS.gene25873:CDS |
TGTGCCTTGCCATCAATAGG+TGG | 0.607674 | 3.2:-69805273 | None:intergenic |
CATCCTTTGAAAAGTTACAA+AGG | 0.609574 | 3.2:+69806507 | MS.gene25873:CDS |
GCATGAAGAAGCAAACTCGA+AGG | 0.610739 | 3.2:+69802681 | MS.gene25873:intron |
ATTGACAATTAAGGTGGACC+GGG | 0.614834 | 3.2:-69802879 | None:intergenic |
TCAGCAAATGCCTCGTCACG+AGG | 0.615936 | 3.2:-69804327 | None:intergenic |
CTTCTATGTTCCTCGTGACG+AGG | 0.615973 | 3.2:+69804317 | MS.gene25873:CDS |
TCCATGGTATATCTCAGATG+TGG | 0.618261 | 3.2:-69805580 | None:intergenic |
TGGACAGAAATTCGAACAGT+GGG | 0.618301 | 3.2:+69806107 | MS.gene25873:CDS |
CTAGTGAGCTCAATAGCTAG+TGG | 0.619729 | 3.2:-69805249 | None:intergenic |
TCACCAGATGAAGAGTACAT+TGG | 0.620155 | 3.2:+69806440 | MS.gene25873:CDS |
CATGAAGAAGCAAACTCGAA+GGG | 0.623114 | 3.2:+69802682 | MS.gene25873:intron |
TCCATGATTGACAATTAAGG+TGG | 0.624709 | 3.2:-69802885 | None:intergenic |
GCTACATAGAGGAATGGCTG+TGG | 0.625359 | 3.2:+69805917 | MS.gene25873:intron |
TATCGTGCGCTTTGATACCC+CGG | 0.626726 | 3.2:+69804578 | MS.gene25873:CDS |
GCTAAGAACTCATTGTGTTG+TGG | 0.627066 | 3.2:+69805492 | MS.gene25873:CDS |
CTGATCAAGAGCTCCAAGCA+TGG | 0.628834 | 3.2:+69806084 | MS.gene25873:CDS |
CAGTAACAATATTCTTGATG+AGG | 0.640270 | 3.2:-69800766 | None:intergenic |
CTATTGATGGCAAGGCACAA+TGG | 0.641673 | 3.2:+69805277 | MS.gene25873:CDS |
AAGTTCTCATTAATGCAAGT+GGG | 0.643884 | 3.2:+69805623 | MS.gene25873:CDS |
AAAAGCTTTAGTGAGTGTGA+AGG | 0.645031 | 3.2:+69800730 | MS.gene25873:CDS |
TTCCAAATGATCTTATCAGT+AGG | 0.653480 | 3.2:+69805737 | MS.gene25873:CDS |
CGGACAAATCTGAAGAACCA+TGG | 0.653620 | 3.2:+69806135 | MS.gene25873:CDS |
TCCACATCTGAGATATACCA+TGG | 0.656207 | 3.2:+69805579 | MS.gene25873:CDS |
GTCGGTGCTACATAGAGGAA+TGG | 0.656625 | 3.2:+69805911 | MS.gene25873:intron |
TACAATGGAGTTAAGCTCTG+TGG | 0.664172 | 3.2:+69805678 | MS.gene25873:CDS |
GAAGATCCTAATGCACAACA+TGG | 0.666470 | 3.2:+69805939 | MS.gene25873:CDS |
ATCAAGAGCTCCAAGCATGG+TGG | 0.666595 | 3.2:+69806087 | MS.gene25873:CDS |
AATTCGAACAGTGGGACATG+CGG | 0.669148 | 3.2:+69806115 | MS.gene25873:CDS |
GTGGACAGAAATTCGAACAG+TGG | 0.676492 | 3.2:+69806106 | MS.gene25873:CDS |
GTGAGTGTGAAGGAAAGTGA+TGG | 0.706550 | 3.2:+69800740 | MS.gene25873:CDS |
AGTGTGAAGGAAAGTGATGG+TGG | 0.718611 | 3.2:+69800743 | MS.gene25873:CDS |
ACAAATCTGAAGAACCATGG+TGG | 0.731842 | 3.2:+69806138 | MS.gene25873:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATCAATAGATAAATATACT+TGG | - | chr3.2:69801732-69801751 | None:intergenic | 15.0% |
!! | ATCTATATGATGATAAAAAA+TGG | + | chr3.2:69801753-69801772 | MS.gene25873:intron | 15.0% |
!! | TATAATAGATAGATACTTTA+TGG | - | chr3.2:69801782-69801801 | None:intergenic | 15.0% |
!! | TATAATTTAAGAGTTCAAAT+GGG | + | chr3.2:69801161-69801180 | MS.gene25873:intron | 15.0% |
!! | TATATATAAGTTATTGTGAA+AGG | - | chr3.2:69804844-69804863 | None:intergenic | 15.0% |
!! | TATTGAATGAATCTATAATA+TGG | + | chr3.2:69801108-69801127 | MS.gene25873:intron | 15.0% |
!! | TGAACAAAAAAAAAAAAACT+AGG | - | chr3.2:69804881-69804900 | None:intergenic | 15.0% |
!! | TTTACTAATAAGAAATTCAT+GGG | - | chr3.2:69803351-69803370 | None:intergenic | 15.0% |
!!! | AAATTGGTGTAAAAAATTTT+AGG | - | chr3.2:69801508-69801527 | None:intergenic | 15.0% |
!!! | AATTGGTGTAAAAAATTTTA+GGG | - | chr3.2:69801507-69801526 | None:intergenic | 15.0% |
!!! | TATTGAATGAATTTAAAACA+TGG | - | chr3.2:69801047-69801066 | None:intergenic | 15.0% |
!!! | TTGCATATATTTTTCTTAAT+TGG | + | chr3.2:69804204-69804223 | MS.gene25873:intron | 15.0% |
!!! | TTTTTTTTTGTTCATTTGAT+AGG | + | chr3.2:69804887-69804906 | MS.gene25873:intron | 15.0% |
!! | AAAAACATCATTAACAAAAG+TGG | + | chr3.2:69801247-69801266 | MS.gene25873:intron | 20.0% |
!! | AATAACATACAAACTAAATC+AGG | - | chr3.2:69803843-69803862 | None:intergenic | 20.0% |
!! | AGAAAAATGTGAATAGAAAT+TGG | + | chr3.2:69803072-69803091 | MS.gene25873:intron | 20.0% |
!! | GAATGCATTTAAATTAATTG+TGG | - | chr3.2:69802609-69802628 | None:intergenic | 20.0% |
!! | GAGAATAAAACATGTTAAAT+TGG | - | chr3.2:69801524-69801543 | None:intergenic | 20.0% |
!! | GTATAATTTAAGAGTTCAAA+TGG | + | chr3.2:69801160-69801179 | MS.gene25873:intron | 20.0% |
!! | GTTTACTAATAAGAAATTCA+TGG | - | chr3.2:69803352-69803371 | None:intergenic | 20.0% |
!! | TTAAGGTGTATAATAACATT+GGG | + | chr3.2:69801621-69801640 | MS.gene25873:intron | 20.0% |
!! | TTTACACAATATGCTTATAT+AGG | + | chr3.2:69806245-69806264 | MS.gene25873:CDS | 20.0% |
!! | TTTCTTAATTGGTATAATTG+TGG | + | chr3.2:69804215-69804234 | MS.gene25873:intron | 20.0% |
!! | TTTGTTAAATTCAATACTAC+AGG | + | chr3.2:69805086-69805105 | MS.gene25873:intron | 20.0% |
!!! | AATAAGTTAGTTCTAGTTAT+AGG | - | chr3.2:69805451-69805470 | None:intergenic | 20.0% |
!!! | GAATAATTATGATTTGTCAA+TGG | - | chr3.2:69800900-69800919 | None:intergenic | 20.0% |
!!! | TTTTTGCTTATATTTATGAC+CGG | + | chr3.2:69801132-69801151 | MS.gene25873:intron | 20.0% |
! | AACATCTTATACAACCTAAT+TGG | - | chr3.2:69805420-69805439 | None:intergenic | 25.0% |
! | AATATTGTTACTGGTATTGT+TGG | + | chr3.2:69800776-69800795 | MS.gene25873:CDS | 25.0% |
! | AATTGAATGTAAACATGTCT+TGG | + | chr3.2:69805870-69805889 | MS.gene25873:intron | 25.0% |
! | AGAATCCAAATTCGATTATT+AGG | + | chr3.2:69801336-69801355 | MS.gene25873:intron | 25.0% |
! | AGAGCTAAATTTCTTTAGTT+TGG | + | chr3.2:69802392-69802411 | MS.gene25873:intron | 25.0% |
! | AGGAATTTGAAGAATAGAAA+TGG | + | chr3.2:69806575-69806594 | MS.gene25873:CDS | 25.0% |
! | ATAGAAGCAATTTACAAAGA+AGG | + | chr3.2:69804465-69804484 | MS.gene25873:CDS | 25.0% |
! | ATAGTCACTGATATAAATCT+TGG | + | chr3.2:69804423-69804442 | MS.gene25873:CDS | 25.0% |
! | ATGAGATATGCTACTATATA+CGG | - | chr3.2:69803805-69803824 | None:intergenic | 25.0% |
! | ATGTGAATAGAAATTGGATT+TGG | + | chr3.2:69803078-69803097 | MS.gene25873:intron | 25.0% |
! | ATTAATCTCATAGACTTACT+TGG | - | chr3.2:69800845-69800864 | None:intergenic | 25.0% |
! | CAACAAATATTATGAGACAT+TGG | + | chr3.2:69802563-69802582 | MS.gene25873:intron | 25.0% |
! | CATATAAATCCTATCCAATT+AGG | - | chr3.2:69803039-69803058 | None:intergenic | 25.0% |
! | CTCACACAAATTTCTTAAAT+GGG | - | chr3.2:69802219-69802238 | None:intergenic | 25.0% |
! | CTTAAGGTGTATAATAACAT+TGG | + | chr3.2:69801620-69801639 | MS.gene25873:intron | 25.0% |
! | GGATGCAATAATCTAAAAAT+TGG | - | chr3.2:69805562-69805581 | None:intergenic | 25.0% |
! | TAATCTAAAAATTGGATGCA+TGG | - | chr3.2:69805554-69805573 | None:intergenic | 25.0% |
! | TAGTCACTGATATAAATCTT+GGG | + | chr3.2:69804424-69804443 | MS.gene25873:CDS | 25.0% |
! | TATACTTGGCATTTAATTAG+TGG | - | chr3.2:69801718-69801737 | None:intergenic | 25.0% |
! | TATATGTTAATTGTGTTTGC+AGG | + | chr3.2:69805470-69805489 | MS.gene25873:intron | 25.0% |
! | TCGAAAAGAATGATATTTCA+AGG | - | chr3.2:69805651-69805670 | None:intergenic | 25.0% |
! | TCTCACACAAATTTCTTAAA+TGG | - | chr3.2:69802220-69802239 | None:intergenic | 25.0% |
! | TGTACAAAAAATAGATGTCT+TGG | + | chr3.2:69802304-69802323 | MS.gene25873:intron | 25.0% |
! | TTCTACCTAATAATCGAATT+TGG | - | chr3.2:69801344-69801363 | None:intergenic | 25.0% |
!! | ACTATTTGAGTTCAATTGTT+TGG | - | chr3.2:69801284-69801303 | None:intergenic | 25.0% |
!! | ATAAAATTTAGGGGTCTTAT+AGG | + | chr3.2:69802077-69802096 | MS.gene25873:intron | 25.0% |
!! | CTTTTCGAATAAGTATACAA+TGG | + | chr3.2:69805663-69805682 | MS.gene25873:CDS | 25.0% |
!! | GGTCATAGTAATTTAAAGTT+TGG | - | chr3.2:69801395-69801414 | None:intergenic | 25.0% |
!! | TAATTTAAAGTTTGGTTGTG+AGG | - | chr3.2:69801387-69801406 | None:intergenic | 25.0% |
!! | TGGTAACAAACACTTAATTT+TGG | + | chr3.2:69800796-69800815 | MS.gene25873:CDS | 25.0% |
!! | TTTTTGCTTATATTTGTGAC+CGG | - | chr3.2:69801023-69801042 | None:intergenic | 25.0% |
!!! | ATTTTCTTTCTAGCAATTGT+TGG | - | chr3.2:69806287-69806306 | None:intergenic | 25.0% |
!!! | TCATTTTGTGTTTTGAGATT+TGG | - | chr3.2:69806164-69806183 | None:intergenic | 25.0% |
!!! | TGTATGTTATTTTTCATGCA+TGG | + | chr3.2:69803852-69803871 | MS.gene25873:intron | 25.0% |
!!! | TTTTTTTTGCGTTAACTCTT+CGG | - | chr3.2:69801433-69801452 | None:intergenic | 25.0% |
AAAAAAAAGGCTCACAAAAG+TGG | + | chr3.2:69801910-69801929 | MS.gene25873:intron | 30.0% | |
AAAAAAAGGCTCACAAAAGT+GGG | + | chr3.2:69801911-69801930 | MS.gene25873:intron | 30.0% | |
AAAATGTGAACTCATTTGGT+TGG | + | chr3.2:69802428-69802447 | MS.gene25873:intron | 30.0% | |
AACAGAGAAAAAAGAGAAAG+AGG | + | chr3.2:69802732-69802751 | MS.gene25873:CDS | 30.0% | |
AACCTATTGAACATACAAGA+TGG | - | chr3.2:69803431-69803450 | None:intergenic | 30.0% | |
AAGTTCTCATTAATGCAAGT+GGG | + | chr3.2:69805623-69805642 | MS.gene25873:CDS | 30.0% | |
ACAAAAAATAGAGCCATCTT+GGG | + | chr3.2:69806463-69806482 | MS.gene25873:CDS | 30.0% | |
ACCTATTGAACATACAAGAT+GGG | - | chr3.2:69803430-69803449 | None:intergenic | 30.0% | |
ACTCATTCCAAAGTTCTTTA+AGG | + | chr3.2:69804536-69804555 | MS.gene25873:CDS | 30.0% | |
AGGAGATTGAATGAAATTGA+AGG | + | chr3.2:69806527-69806546 | MS.gene25873:CDS | 30.0% | |
ATAAATCCTATCCAATTAGG+TGG | - | chr3.2:69803036-69803055 | None:intergenic | 30.0% | |
ATATAGCATCCAATTGGTTA+AGG | + | chr3.2:69804783-69804802 | MS.gene25873:CDS | 30.0% | |
ATATGAACTTAACTGTCATG+TGG | + | chr3.2:69804645-69804664 | MS.gene25873:intron | 30.0% | |
ATATTGGTGGAATCAGAATT+AGG | - | chr3.2:69805318-69805337 | None:intergenic | 30.0% | |
ATCGGGAAGATAAAATTTAG+GGG | + | chr3.2:69802068-69802087 | MS.gene25873:intron | 30.0% | |
ATGAGCTAATAGAACTAAGA+GGG | + | chr3.2:69803933-69803952 | MS.gene25873:CDS | 30.0% | |
ATGGGATGCAATTAAACAAT+GGG | + | chr3.2:69806013-69806032 | MS.gene25873:CDS | 30.0% | |
ATGGTCTAACTAAGATCATT+TGG | - | chr3.2:69802019-69802038 | None:intergenic | 30.0% | |
ATGTAAACATGTCTTGGTTT+CGG | + | chr3.2:69805876-69805895 | MS.gene25873:intron | 30.0% | |
CAGTAACAATATTCTTGATG+AGG | - | chr3.2:69800769-69800788 | None:intergenic | 30.0% | |
CATCGGGAAGATAAAATTTA+GGG | + | chr3.2:69802067-69802086 | MS.gene25873:intron | 30.0% | |
CTAAAGAATATAGTCCTTGA+TGG | + | chr3.2:69802844-69802863 | MS.gene25873:CDS | 30.0% | |
CTCATCAAGAATATTGTTAC+TGG | + | chr3.2:69800767-69800786 | MS.gene25873:CDS | 30.0% | |
CTGTGTGTTGCAATTATAAT+AGG | - | chr3.2:69805520-69805539 | None:intergenic | 30.0% | |
CTTCCGTCAACAAAAAAAAA+AGG | + | chr3.2:69801897-69801916 | MS.gene25873:intron | 30.0% | |
GAATCAGTTGTCAACATTTA+AGG | + | chr3.2:69802366-69802385 | MS.gene25873:intron | 30.0% | |
GAATCCATGATTGACAATTA+AGG | - | chr3.2:69802891-69802910 | None:intergenic | 30.0% | |
GGTAACGATGTTAATACATT+AGG | + | chr3.2:69802957-69802976 | MS.gene25873:intron | 30.0% | |
TAAATCCTATCCAATTAGGT+GGG | - | chr3.2:69803035-69803054 | None:intergenic | 30.0% | |
TAACCAATTGGATGCTATAT+GGG | - | chr3.2:69804783-69804802 | None:intergenic | 30.0% | |
TAACTCTTAAGTAAGACCAT+GGG | - | chr3.2:69802104-69802123 | None:intergenic | 30.0% | |
TACCAAAATGTGAACTCATT+TGG | + | chr3.2:69802424-69802443 | MS.gene25873:intron | 30.0% | |
TACCTACTGATAAGATCATT+TGG | - | chr3.2:69805742-69805761 | None:intergenic | 30.0% | |
TACTCCTTTCTTCATATAGT+GGG | - | chr3.2:69804290-69804309 | None:intergenic | 30.0% | |
TAGTCGATCAAAATTAGTAG+CGG | - | chr3.2:69802497-69802516 | None:intergenic | 30.0% | |
TATGGGATGCAATTAAACAA+TGG | + | chr3.2:69806012-69806031 | MS.gene25873:CDS | 30.0% | |
TCAATATTCCTTCACTAGTA+AGG | - | chr3.2:69805227-69805246 | None:intergenic | 30.0% | |
TCTGATCTCAATATCTCTTA+AGG | + | chr3.2:69801604-69801623 | MS.gene25873:intron | 30.0% | |
TCTTGTGTGTTTCAAATGTT+GGG | - | chr3.2:69803582-69803601 | None:intergenic | 30.0% | |
TGAATAGAAATTGGATTTGG+TGG | + | chr3.2:69803081-69803100 | MS.gene25873:intron | 30.0% | |
TGTTTGAACTTACTCTTGTA+TGG | - | chr3.2:69804606-69804625 | None:intergenic | 30.0% | |
TTAACCAATTGGATGCTATA+TGG | - | chr3.2:69804784-69804803 | None:intergenic | 30.0% | |
TTAACTCTTAAGTAAGACCA+TGG | - | chr3.2:69802105-69802124 | None:intergenic | 30.0% | |
TTAGCATCCTTAAAGAACTT+TGG | - | chr3.2:69804546-69804565 | None:intergenic | 30.0% | |
TTCCAAATGATCTTATCAGT+AGG | + | chr3.2:69805737-69805756 | MS.gene25873:CDS | 30.0% | |
TTCTTGTGTGTTTCAAATGT+TGG | - | chr3.2:69803583-69803602 | None:intergenic | 30.0% | |
TTTGCTTCTTCATGCAAATA+AGG | - | chr3.2:69802676-69802695 | None:intergenic | 30.0% | |
! | AACCAAATGAGTTCACATTT+TGG | - | chr3.2:69802429-69802448 | None:intergenic | 30.0% |
! | AATGTTGCTTGAATTTGTGA+TGG | - | chr3.2:69806386-69806405 | None:intergenic | 30.0% |
! | ATCAACTAGTCTATCAACAA+TGG | - | chr3.2:69803531-69803550 | None:intergenic | 30.0% |
! | CATCCTTTGAAAAGTTACAA+AGG | + | chr3.2:69806507-69806526 | MS.gene25873:CDS | 30.0% |
! | TAGCAATTGTTGGTCTATTA+GGG | - | chr3.2:69806277-69806296 | None:intergenic | 30.0% |
! | TCTAGGATATGGATATTGTT+TGG | - | chr3.2:69804071-69804090 | None:intergenic | 30.0% |
! | TCTCCTTTGTAACTTTTCAA+AGG | - | chr3.2:69806513-69806532 | None:intergenic | 30.0% |
! | TGAGTTTGCTCAAAACTTTA+AGG | + | chr3.2:69803719-69803738 | MS.gene25873:intron | 30.0% |
! | TTTTGTTCATTTGATAGGAG+TGG | + | chr3.2:69804892-69804911 | MS.gene25873:intron | 30.0% |
! | TTTTTGGATTACCACGATAT+AGG | - | chr3.2:69803498-69803517 | None:intergenic | 30.0% |
!! | AATGGCTTTAAAGACTCATA+AGG | - | chr3.2:69806614-69806633 | None:intergenic | 30.0% |
!! | ACTTTAAGGCATTAGACATA+TGG | + | chr3.2:69803733-69803752 | MS.gene25873:intron | 30.0% |
!! | CTATTTTTCCTTACTAGTGA+AGG | + | chr3.2:69805216-69805235 | MS.gene25873:CDS | 30.0% |
!! | GATATGTAAGCATTGAGAAT+AGG | - | chr3.2:69804132-69804151 | None:intergenic | 30.0% |
!! | GCATCCAATTTACTTTTCAA+AGG | - | chr3.2:69804918-69804937 | None:intergenic | 30.0% |
!! | TTGAAGGTATTATAGACTCA+AGG | + | chr3.2:69806543-69806562 | MS.gene25873:CDS | 30.0% |
!! | TTTGAGTTACCAGCAAATTT+TGG | + | chr3.2:69802772-69802791 | MS.gene25873:CDS | 30.0% |
!!! | AAAGTTTTGAGCAAACTCAA+AGG | - | chr3.2:69803718-69803737 | None:intergenic | 30.0% |
!!! | AGAACTTTGGAATGAGTTTT+TGG | - | chr3.2:69804533-69804552 | None:intergenic | 30.0% |
!!! | AGATTTTTTACCGCTAAACA+AGG | + | chr3.2:69803459-69803478 | MS.gene25873:intron | 30.0% |
!!! | AGTCTTTAAAGCCATTTTCA+GGG | + | chr3.2:69806618-69806637 | MS.gene25873:CDS | 30.0% |
!!! | ATTCTTTTGGTTTTCAGATG+TGG | + | chr3.2:69804726-69804745 | MS.gene25873:CDS | 30.0% |
!!! | CAATGGCTTGATAGTTTTTT+TGG | - | chr3.2:69803514-69803533 | None:intergenic | 30.0% |
!!! | GAGCCTTTTTTTTTTGTTGA+CGG | - | chr3.2:69801903-69801922 | None:intergenic | 30.0% |
AAATTGGATGCCCAAATCTA+TGG | + | chr3.2:69804927-69804946 | MS.gene25873:CDS | 35.0% | |
AACTTACTCTTGTATGGTTC+CGG | - | chr3.2:69804600-69804619 | None:intergenic | 35.0% | |
AATACTTCTGCCGTATCTTT+AGG | + | chr3.2:69804369-69804388 | MS.gene25873:CDS | 35.0% | |
ACATCATTACCACTATAGCT+TGG | + | chr3.2:69806192-69806211 | MS.gene25873:CDS | 35.0% | |
ACCCATCTTGTATGTTCAAT+AGG | + | chr3.2:69803426-69803445 | MS.gene25873:intron | 35.0% | |
ACTAACACACTCATGCATAT+GGG | + | chr3.2:69802988-69803007 | MS.gene25873:intron | 35.0% | |
AGTCGATCAAAATTAGTAGC+GGG | - | chr3.2:69802496-69802515 | None:intergenic | 35.0% | |
ATAATAACATTGGGTGTGCA+AGG | + | chr3.2:69801630-69801649 | MS.gene25873:intron | 35.0% | |
ATCAATGTGAATATGTGCCT+CGG | + | chr3.2:69804688-69804707 | MS.gene25873:intron | 35.0% | |
ATCATGAGCTAATAAGCCAT+TGG | + | chr3.2:69805388-69805407 | MS.gene25873:CDS | 35.0% | |
ATGAACAAGAACATGAGCTT+TGG | - | chr3.2:69805358-69805377 | None:intergenic | 35.0% | |
ATGTGGATCTCACTTAAGAA+TGG | - | chr3.2:69802132-69802151 | None:intergenic | 35.0% | |
ATTCTGATTCCACCAATATC+TGG | + | chr3.2:69805319-69805338 | MS.gene25873:CDS | 35.0% | |
ATTGAGGGAACAACACTATA+TGG | + | chr3.2:69805183-69805202 | MS.gene25873:CDS | 35.0% | |
CAAAAAATAGAGCCATCTTG+GGG | + | chr3.2:69806464-69806483 | MS.gene25873:CDS | 35.0% | |
CAATGACGGTCTTCTAATAT+GGG | + | chr3.2:69805995-69806014 | MS.gene25873:CDS | 35.0% | |
CATGTTCTTGTTCATGATTC+TGG | + | chr3.2:69805363-69805382 | MS.gene25873:CDS | 35.0% | |
CCATCGGGAAGATAAAATTT+AGG | + | chr3.2:69802066-69802085 | MS.gene25873:intron | 35.0% | |
CTAATAGAACTAAGAGGGAA+TGG | + | chr3.2:69803938-69803957 | MS.gene25873:CDS | 35.0% | |
CTCTTAAATTATACACCCTC+CGG | - | chr3.2:69801154-69801173 | None:intergenic | 35.0% | |
CTGTGGCATATGATAATCTT+TGG | + | chr3.2:69805695-69805714 | MS.gene25873:CDS | 35.0% | |
CTTAGTTAGACCATTTCCAA+TGG | + | chr3.2:69802025-69802044 | MS.gene25873:intron | 35.0% | |
GAAGTTCTCATTAATGCAAG+TGG | + | chr3.2:69805622-69805641 | MS.gene25873:CDS | 35.0% | |
GAAGTTTCATACCTATATCG+TGG | + | chr3.2:69803484-69803503 | MS.gene25873:intron | 35.0% | |
GACAAAAAATAGAGCCATCT+TGG | + | chr3.2:69806462-69806481 | MS.gene25873:CDS | 35.0% | |
GACTCAACAAGGATATAGTT+GGG | - | chr3.2:69803650-69803669 | None:intergenic | 35.0% | |
GAGTCATTGGATTCAAGATT+TGG | - | chr3.2:69804501-69804520 | None:intergenic | 35.0% | |
GATGAGCTAATAGAACTAAG+AGG | + | chr3.2:69803932-69803951 | MS.gene25873:CDS | 35.0% | |
GGGTGAGAATTCAACTATAA+AGG | + | chr3.2:69806484-69806503 | MS.gene25873:CDS | 35.0% | |
GTACTCCTTTCTTCATATAG+TGG | - | chr3.2:69804291-69804310 | None:intergenic | 35.0% | |
GTGAAGAAAACTCTCTTTGT+AGG | - | chr3.2:69802931-69802950 | None:intergenic | 35.0% | |
TAAGTTGTGACATGGAAAGA+TGG | - | chr3.2:69801204-69801223 | None:intergenic | 35.0% | |
TAGACTCAAGGAATGAAGAT+AGG | + | chr3.2:69806555-69806574 | MS.gene25873:CDS | 35.0% | |
TATGACGTCTACAATGATCT+TGG | + | chr3.2:69803998-69804017 | MS.gene25873:CDS | 35.0% | |
TCCACCTTAATTGTCAATCA+TGG | + | chr3.2:69802884-69802903 | MS.gene25873:CDS | 35.0% | |
TCCATGATTGACAATTAAGG+TGG | - | chr3.2:69802888-69802907 | None:intergenic | 35.0% | |
TCTGATCTTAATCCAACTAC+CGG | + | chr3.2:69803218-69803237 | MS.gene25873:intron | 35.0% | |
TCTTCATGCAAATAAGGTTG+CGG | - | chr3.2:69802670-69802689 | None:intergenic | 35.0% | |
TGCTTATATTTATGACCGGA+GGG | + | chr3.2:69801136-69801155 | MS.gene25873:intron | 35.0% | |
TGTAGTCAAGCCTAAAGATA+CGG | - | chr3.2:69804382-69804401 | None:intergenic | 35.0% | |
TGTGGATCTCACTTAAGAAT+GGG | - | chr3.2:69802131-69802150 | None:intergenic | 35.0% | |
TTGAAGAATAGAAATGGAGC+TGG | + | chr3.2:69806581-69806600 | MS.gene25873:CDS | 35.0% | |
TTGCTTATATTTATGACCGG+AGG | + | chr3.2:69801135-69801154 | MS.gene25873:intron | 35.0% | |
TTGGAGAAAATTCGAGTCAT+TGG | - | chr3.2:69804514-69804533 | None:intergenic | 35.0% | |
TTTCCCATTCTTCCTTAGTA+GGG | - | chr3.2:69806322-69806341 | None:intergenic | 35.0% | |
TTTGGTTGTGAGGTAAGAAT+AGG | - | chr3.2:69801377-69801396 | None:intergenic | 35.0% | |
! | AAAAGCTTTAGTGAGTGTGA+AGG | + | chr3.2:69800730-69800749 | MS.gene25873:CDS | 35.0% |
! | AAATTAGTAGCGGGAAGAAA+CGG | - | chr3.2:69802487-69802506 | None:intergenic | 35.0% |
! | CCTAAATTTTATCTTCCCGA+TGG | - | chr3.2:69802069-69802088 | None:intergenic | 35.0% |
! | CTAGCAATTGTTGGTCTATT+AGG | - | chr3.2:69806278-69806297 | None:intergenic | 35.0% |
! | CTGATAGTTAAGTTGTGACA+TGG | - | chr3.2:69801212-69801231 | None:intergenic | 35.0% |
! | GAGAGTTTTCTTCACTAACA+AGG | + | chr3.2:69802936-69802955 | MS.gene25873:CDS | 35.0% |
! | GTCATGTGGAAATTCTTTTC+TGG | + | chr3.2:69804659-69804678 | MS.gene25873:intron | 35.0% |
! | GTGGCCTTTGAAAAGTAAAT+TGG | + | chr3.2:69804911-69804930 | MS.gene25873:CDS | 35.0% |
! | TGACAACTGATTCATGACAA+TGG | - | chr3.2:69802359-69802378 | None:intergenic | 35.0% |
! | TGCTACTATATACGGATTGT+CGG | - | chr3.2:69803797-69803816 | None:intergenic | 35.0% |
! | TTGTAGGGGATAGATTCTTT+TGG | + | chr3.2:69804713-69804732 | MS.gene25873:intron | 35.0% |
! | TTTTCCCATTCTTCCTTAGT+AGG | - | chr3.2:69806323-69806342 | None:intergenic | 35.0% |
!! | ACCAGCAAATTTTGGAAATG+TGG | + | chr3.2:69802780-69802799 | MS.gene25873:CDS | 35.0% |
!! | ATTGAGAGAAGTATTCTCCA+AGG | - | chr3.2:69802464-69802483 | None:intergenic | 35.0% |
!! | CCAGCAAATTTTGGAAATGT+GGG | + | chr3.2:69802781-69802800 | MS.gene25873:CDS | 35.0% |
!! | TCTCTAGTAATTGCTGATTC+TGG | - | chr3.2:69804957-69804976 | None:intergenic | 35.0% |
!! | TCTCTCAGTTTGCTAACATA+TGG | - | chr3.2:69805162-69805181 | None:intergenic | 35.0% |
!! | TCTTTGGCAATTTGATTTGC+AGG | + | chr3.2:69805711-69805730 | MS.gene25873:CDS | 35.0% |
!! | TTTGTAGGAGTATCATGCTT+AGG | - | chr3.2:69802916-69802935 | None:intergenic | 35.0% |
!!! | GAGTCTTTAAAGCCATTTTC+AGG | + | chr3.2:69806617-69806636 | MS.gene25873:CDS | 35.0% |
!!! | TTTTTTACCGCTAAACAAGG+TGG | + | chr3.2:69803462-69803481 | MS.gene25873:intron | 35.0% |
!!! | TTTTTTCTCTGTTTCGTGTG+CGG | - | chr3.2:69802725-69802744 | None:intergenic | 35.0% |
AACAATCACCGATGTTTGGA+TGG | - | chr3.2:69803120-69803139 | None:intergenic | 40.0% | |
AACTCTTAAGCAAGCAAGTC+AGG | + | chr3.2:69803369-69803388 | MS.gene25873:intron | 40.0% | |
AACTTACAGCACAGTTGAAG+AGG | + | chr3.2:69804998-69805017 | MS.gene25873:CDS | 40.0% | |
AAGACCCTACTAAGGAAGAA+TGG | + | chr3.2:69806315-69806334 | MS.gene25873:CDS | 40.0% | |
AATATGTGCCTCGGAATTGT+AGG | + | chr3.2:69804697-69804716 | MS.gene25873:intron | 40.0% | |
ACAAATCTGAAGAACCATGG+TGG | + | chr3.2:69806138-69806157 | MS.gene25873:CDS | 40.0% | |
ACAAGGATATAGTTGGGACT+AGG | - | chr3.2:69803644-69803663 | None:intergenic | 40.0% | |
ACCTAATTGGTACTCACCAA+TGG | - | chr3.2:69805407-69805426 | None:intergenic | 40.0% | |
ACTCTTAAGCAAGCAAGTCA+GGG | + | chr3.2:69803370-69803389 | MS.gene25873:intron | 40.0% | |
ACTTACTCTTGTATGGTTCC+GGG | - | chr3.2:69804599-69804618 | None:intergenic | 40.0% | |
AGACCCTACTAAGGAAGAAT+GGG | + | chr3.2:69806316-69806335 | MS.gene25873:CDS | 40.0% | |
AGAGAAATATGATCGGAAGG+TGG | - | chr3.2:69801561-69801580 | None:intergenic | 40.0% | |
AGAGAGATAGACAAAGAGAG+AGG | - | chr3.2:69801587-69801606 | None:intergenic | 40.0% | |
AGAGATAGACAAAGAGAGAG+GGG | - | chr3.2:69801585-69801604 | None:intergenic | 40.0% | |
AGCAAACTGAGAGAGATTGA+GGG | + | chr3.2:69805168-69805187 | MS.gene25873:CDS | 40.0% | |
AGTTAGACCATTTCCAATGG+AGG | + | chr3.2:69802028-69802047 | MS.gene25873:intron | 40.0% | |
ATATAGTTGGGACTAGGGAA+TGG | - | chr3.2:69803638-69803657 | None:intergenic | 40.0% | |
ATATGTGCCTCGGAATTGTA+GGG | + | chr3.2:69804698-69804717 | MS.gene25873:intron | 40.0% | |
ATCAGTGACTATTGCGTCTA+AGG | - | chr3.2:69804415-69804434 | None:intergenic | 40.0% | |
ATGTCCATGCCTTAACCAAT+TGG | - | chr3.2:69804795-69804814 | None:intergenic | 40.0% | |
ATTGACAATTAAGGTGGACC+GGG | - | chr3.2:69802882-69802901 | None:intergenic | 40.0% | |
CAACCCATATAGCATCCAAT+TGG | + | chr3.2:69804777-69804796 | MS.gene25873:CDS | 40.0% | |
CAAGGATATAGTTGGGACTA+GGG | - | chr3.2:69803643-69803662 | None:intergenic | 40.0% | |
CAATTGGATGCTATATGGGT+TGG | - | chr3.2:69804779-69804798 | None:intergenic | 40.0% | |
CACTAAATCAGACACCAGAT+AGG | + | chr3.2:69805797-69805816 | MS.gene25873:intron | 40.0% | |
CACTAACACACTCATGCATA+TGG | + | chr3.2:69802987-69803006 | MS.gene25873:intron | 40.0% | |
CAGACCCACTATATGAAGAA+AGG | + | chr3.2:69804283-69804302 | MS.gene25873:intron | 40.0% | |
CATGAAGAAGCAAACTCGAA+GGG | + | chr3.2:69802682-69802701 | MS.gene25873:intron | 40.0% | |
CCAATGACGGTCTTCTAATA+TGG | + | chr3.2:69805994-69806013 | MS.gene25873:CDS | 40.0% | |
CCATATTAGAAGACCGTCAT+TGG | - | chr3.2:69805997-69806016 | None:intergenic | 40.0% | |
CCCACATTTCCAAAATTTGC+TGG | - | chr3.2:69802784-69802803 | None:intergenic | 40.0% | |
CGACTCAACAAGGATATAGT+TGG | - | chr3.2:69803651-69803670 | None:intergenic | 40.0% | |
CGCAACTTTATTGATCTCCA+TGG | - | chr3.2:69805599-69805618 | None:intergenic | 40.0% | |
CTCAGCTTTCTTAATCCACT+TGG | - | chr3.2:69803908-69803927 | None:intergenic | 40.0% | |
CTGCGTCAAATTGTTAACTC+CGG | + | chr3.2:69803248-69803267 | MS.gene25873:intron | 40.0% | |
CTTCATGCAAATAAGGTTGC+GGG | - | chr3.2:69802669-69802688 | None:intergenic | 40.0% | |
GAAGATCCTAATGCACAACA+TGG | + | chr3.2:69805939-69805958 | MS.gene25873:CDS | 40.0% | |
GAGAGATAGACAAAGAGAGA+GGG | - | chr3.2:69801586-69801605 | None:intergenic | 40.0% | |
GATCAACAATCACCGATGTT+TGG | - | chr3.2:69803124-69803143 | None:intergenic | 40.0% | |
GATTCAAGTATGTCTGAGCT+TGG | - | chr3.2:69806065-69806084 | None:intergenic | 40.0% | |
GATTGACAATTAAGGTGGAC+CGG | - | chr3.2:69802883-69802902 | None:intergenic | 40.0% | |
GATTGTTGATCTCGCACTAA+TGG | + | chr3.2:69803133-69803152 | MS.gene25873:intron | 40.0% | |
GCTAAGAACTCATTGTGTTG+TGG | + | chr3.2:69805492-69805511 | MS.gene25873:CDS | 40.0% | |
GGAGGGATTGAGTGTTTATT+AGG | + | chr3.2:69802249-69802268 | MS.gene25873:intron | 40.0% | |
GTCAGTATTAGTGTCCTATC+TGG | - | chr3.2:69805814-69805833 | None:intergenic | 40.0% | |
GTGGATCTCACTTAAGAATG+GGG | - | chr3.2:69802130-69802149 | None:intergenic | 40.0% | |
GTTAACTCTTCGGTTCCTAA+CGG | - | chr3.2:69801423-69801442 | None:intergenic | 40.0% | |
TACAATGGAGTTAAGCTCTG+TGG | + | chr3.2:69805678-69805697 | MS.gene25873:CDS | 40.0% | |
TAGCAAACTGAGAGAGATTG+AGG | + | chr3.2:69805167-69805186 | MS.gene25873:CDS | 40.0% | |
TATAGTTGGGACTAGGGAAT+GGG | - | chr3.2:69803637-69803656 | None:intergenic | 40.0% | |
TCCATGGTATATCTCAGATG+TGG | - | chr3.2:69805583-69805602 | None:intergenic | 40.0% | |
TCGAAGGGAGAGACAATAAA+AGG | + | chr3.2:69802697-69802716 | MS.gene25873:CDS | 40.0% | |
TCTCACAAACGATTCGTCAT+TGG | - | chr3.2:69801319-69801338 | None:intergenic | 40.0% | |
TGCTTATATTTGTGACCGGA+GGG | - | chr3.2:69801019-69801038 | None:intergenic | 40.0% | |
TGGACAGAAATTCGAACAGT+GGG | + | chr3.2:69806107-69806126 | MS.gene25873:CDS | 40.0% | |
TGTATCAGAATGCTTTCGAC+CGG | - | chr3.2:69804104-69804123 | None:intergenic | 40.0% | |
TGTCCAATGTACTCTTCATC+TGG | - | chr3.2:69806446-69806465 | None:intergenic | 40.0% | |
TTACCATCACAAACACCAAG+TGG | + | chr3.2:69803890-69803909 | MS.gene25873:CDS | 40.0% | |
TTCACTCCATGTTGTGCATT+AGG | - | chr3.2:69805948-69805967 | None:intergenic | 40.0% | |
TTCATGCAAATAAGGTTGCG+GGG | - | chr3.2:69802668-69802687 | None:intergenic | 40.0% | |
TTGCTTATATTTGTGACCGG+AGG | - | chr3.2:69801020-69801039 | None:intergenic | 40.0% | |
TTGTGACATGGAAAGATGGA+GGG | - | chr3.2:69801200-69801219 | None:intergenic | 40.0% | |
! | ATTCCACCAATATCTGGCTT+TGG | + | chr3.2:69805325-69805344 | MS.gene25873:CDS | 40.0% |
! | ATTCTGGTGGACCATAGATT+TGG | - | chr3.2:69804941-69804960 | None:intergenic | 40.0% |
! | CAACTGATTCATGACAATGG+TGG | - | chr3.2:69802356-69802375 | None:intergenic | 40.0% |
! | GAAACTTCCACCTTGTTTAG+CGG | - | chr3.2:69803472-69803491 | None:intergenic | 40.0% |
! | GACTATCCTTTTGCCAATGA+CGG | + | chr3.2:69805981-69806000 | MS.gene25873:CDS | 40.0% |
! | GGGTCGCACTAAATTTTGTT+GGG | + | chr3.2:69803008-69803027 | MS.gene25873:intron | 40.0% |
! | TACTATGACCCTTTTCCGTT+AGG | + | chr3.2:69801405-69801424 | MS.gene25873:intron | 40.0% |
! | TCACCAGATGAAGAGTACAT+TGG | + | chr3.2:69806440-69806459 | MS.gene25873:CDS | 40.0% |
! | TCCACATCTGAGATATACCA+TGG | + | chr3.2:69805579-69805598 | MS.gene25873:CDS | 40.0% |
! | TGGGTCGCACTAAATTTTGT+TGG | + | chr3.2:69803007-69803026 | MS.gene25873:intron | 40.0% |
! | TTCTGGTGGACCATAGATTT+GGG | - | chr3.2:69804940-69804959 | None:intergenic | 40.0% |
!! | AATCCACTTGGTGTTTGTGA+TGG | - | chr3.2:69803896-69803915 | None:intergenic | 40.0% |
!! | CATTCCAAAAGTGTTTGCTC+TGG | - | chr3.2:69806359-69806378 | None:intergenic | 40.0% |
!! | CTAGTAATTGCTGATTCTGG+TGG | - | chr3.2:69804954-69804973 | None:intergenic | 40.0% |
AAGCCTCCAAAGCCAGATAT+TGG | - | chr3.2:69805334-69805353 | None:intergenic | 45.0% | |
AATTCGAACAGTGGGACATG+CGG | + | chr3.2:69806115-69806134 | MS.gene25873:CDS | 45.0% | |
AGAAGACCGTCATTGGCAAA+AGG | - | chr3.2:69805990-69806009 | None:intergenic | 45.0% | |
AGATGCTGTCCAAGCTATAG+TGG | - | chr3.2:69806204-69806223 | None:intergenic | 45.0% | |
AGTGTGAAGGAAAGTGATGG+TGG | + | chr3.2:69800743-69800762 | MS.gene25873:CDS | 45.0% | |
ATCTATCCCCTACAATTCCG+AGG | - | chr3.2:69804708-69804727 | None:intergenic | 45.0% | |
ATTTGTGTGAGACGCTGAGT+TGG | + | chr3.2:69802228-69802247 | MS.gene25873:intron | 45.0% | |
CATTGTGCCTTGCCATCAAT+AGG | - | chr3.2:69805279-69805298 | None:intergenic | 45.0% | |
CGGACAAATCTGAAGAACCA+TGG | + | chr3.2:69806135-69806154 | MS.gene25873:CDS | 45.0% | |
CTAGTGAGCTCAATAGCTAG+TGG | - | chr3.2:69805252-69805271 | None:intergenic | 45.0% | |
CTCAAAAGACCTGTTCTTGG+TGG | + | chr3.2:69804043-69804062 | MS.gene25873:CDS | 45.0% | |
CTCACTAGACCACCTATTGA+TGG | + | chr3.2:69805264-69805283 | MS.gene25873:CDS | 45.0% | |
CTCTTAAGCAAGCAAGTCAG+GGG | + | chr3.2:69803371-69803390 | MS.gene25873:intron | 45.0% | |
CTTACTCTTGTATGGTTCCG+GGG | - | chr3.2:69804598-69804617 | None:intergenic | 45.0% | |
CTTCGGTTCCTAACGGAAAA+GGG | - | chr3.2:69801416-69801435 | None:intergenic | 45.0% | |
GAACTAAGAGGGAATGGAGA+AGG | + | chr3.2:69803944-69803963 | MS.gene25873:CDS | 45.0% | |
GAATTTCTGTCCACCATGCT+TGG | - | chr3.2:69806100-69806119 | None:intergenic | 45.0% | |
GACCTCAAAAGACCTGTTCT+TGG | + | chr3.2:69804040-69804059 | MS.gene25873:CDS | 45.0% | |
GAGATAGACAAAGAGAGAGG+GGG | - | chr3.2:69801584-69801603 | None:intergenic | 45.0% | |
GAGGGGGAGAGAAATATGAT+CGG | - | chr3.2:69801568-69801587 | None:intergenic | 45.0% | |
GCATCCAATTGGTTAAGGCA+TGG | + | chr3.2:69804788-69804807 | MS.gene25873:intron | 45.0% | |
GCATGAAGAAGCAAACTCGA+AGG | + | chr3.2:69802681-69802700 | MS.gene25873:intron | 45.0% | |
GCCATTGGTGAGTACCAATT+AGG | + | chr3.2:69805403-69805422 | MS.gene25873:intron | 45.0% | |
GGAATTTGCCAGAGAGACTT+TGG | + | chr3.2:69804747-69804766 | MS.gene25873:CDS | 45.0% | |
GGGAGAGAAATATGATCGGA+AGG | - | chr3.2:69801564-69801583 | None:intergenic | 45.0% | |
GTCAAATTGTTAACTCCGGC+AGG | + | chr3.2:69803252-69803271 | MS.gene25873:intron | 45.0% | |
GTCACATGCCATCCAAACAT+CGG | + | chr3.2:69803109-69803128 | MS.gene25873:intron | 45.0% | |
GTGAGTGTGAAGGAAAGTGA+TGG | + | chr3.2:69800740-69800759 | MS.gene25873:CDS | 45.0% | |
GTGGACAGAAATTCGAACAG+TGG | + | chr3.2:69806106-69806125 | MS.gene25873:CDS | 45.0% | |
GTTGAATTCTCACCCCAAGA+TGG | - | chr3.2:69806479-69806498 | None:intergenic | 45.0% | |
GTTGTGACATGGAAAGATGG+AGG | - | chr3.2:69801201-69801220 | None:intergenic | 45.0% | |
TATGTGCCTCGGAATTGTAG+GGG | + | chr3.2:69804699-69804718 | MS.gene25873:intron | 45.0% | |
TCAGGATCCTCCATTGGAAA+TGG | - | chr3.2:69802038-69802057 | None:intergenic | 45.0% | |
TCCTTAGTAGGGTCTTCTGT+TGG | - | chr3.2:69806311-69806330 | None:intergenic | 45.0% | |
TCTTCGGTTCCTAACGGAAA+AGG | - | chr3.2:69801417-69801436 | None:intergenic | 45.0% | |
TGTATGCAGTATACACCCTC+CGG | + | chr3.2:69801001-69801020 | MS.gene25873:intron | 45.0% | |
TTGAGGTCAGTGGTTATGTC+AGG | - | chr3.2:69804028-69804047 | None:intergenic | 45.0% | |
TTTCGGACACAGACATGTGT+CGG | + | chr3.2:69805893-69805912 | MS.gene25873:intron | 45.0% | |
TTTGTTGGGACCCACCTAAT+TGG | + | chr3.2:69803022-69803041 | MS.gene25873:intron | 45.0% | |
! | CACCAAGAACAGGTCTTTTG+AGG | - | chr3.2:69804045-69804064 | None:intergenic | 45.0% |
! | CCAACCAGAGCAAACACTTT+TGG | + | chr3.2:69806352-69806371 | MS.gene25873:CDS | 45.0% |
! | CTATTGATGGCAAGGCACAA+TGG | + | chr3.2:69805277-69805296 | MS.gene25873:CDS | 45.0% |
! | TAGACCACCTATTGATGGCA+AGG | + | chr3.2:69805269-69805288 | MS.gene25873:CDS | 45.0% |
!! | CCAAAAGTGTTTGCTCTGGT+TGG | - | chr3.2:69806355-69806374 | None:intergenic | 45.0% |
!! | GGTCGAAAGCATTCTGATAC+AGG | + | chr3.2:69804103-69804122 | MS.gene25873:CDS | 45.0% |
!! | TGGTTGGTCTCTTGAAACCT+TGG | + | chr3.2:69802444-69802463 | MS.gene25873:intron | 45.0% |
!! | TTAAAGCCATTTTCAGGGCC+TGG | + | chr3.2:69806623-69806642 | MS.gene25873:CDS | 45.0% |
!!! | AACAGGTCTTTTGAGGTCAG+TGG | - | chr3.2:69804038-69804057 | None:intergenic | 45.0% |
!!! | GTTTTGAGATTTGGCCACCA+TGG | - | chr3.2:69806155-69806174 | None:intergenic | 45.0% |
!!! | TGGAAATGTGGGTGCTGTTT+TGG | + | chr3.2:69802792-69802811 | MS.gene25873:CDS | 45.0% |
!!! | TTTTTAATATTAAAAAAATG+TGG | - | chr3.2:69802149-69802168 | None:intergenic | 5.0% |
AATTTGACGCAGTCACGCAC+CGG | - | chr3.2:69803240-69803259 | None:intergenic | 50.0% | |
ATCAAGAGCTCCAAGCATGG+TGG | + | chr3.2:69806087-69806106 | MS.gene25873:CDS | 50.0% | |
ATCCTGACACGTACTCCATC+GGG | + | chr3.2:69802051-69802070 | MS.gene25873:intron | 50.0% | |
CAACACGAATCTAGACCTGC+CGG | - | chr3.2:69803270-69803289 | None:intergenic | 50.0% | |
CCTCCAAAGCCAGATATTGG+TGG | - | chr3.2:69805331-69805350 | None:intergenic | 50.0% | |
CTGATCAAGAGCTCCAAGCA+TGG | + | chr3.2:69806084-69806103 | MS.gene25873:CDS | 50.0% | |
CTTCTATGTTCCTCGTGACG+AGG | + | chr3.2:69804317-69804336 | MS.gene25873:CDS | 50.0% | |
GACTCACGAGGAGAGTCTTA+CGG | + | chr3.2:69803672-69803691 | MS.gene25873:intron | 50.0% | |
GAGGAGAGTCTTACGGTACT+GGG | + | chr3.2:69803679-69803698 | MS.gene25873:intron | 50.0% | |
GATCCTGACACGTACTCCAT+CGG | + | chr3.2:69802050-69802069 | MS.gene25873:intron | 50.0% | |
GCCAACAGAAGACCCTACTA+AGG | + | chr3.2:69806307-69806326 | MS.gene25873:CDS | 50.0% | |
GCTACATAGAGGAATGGCTG+TGG | + | chr3.2:69805917-69805936 | MS.gene25873:intron | 50.0% | |
TACGTGTCAGGATCCTCCAT+TGG | - | chr3.2:69802044-69802063 | None:intergenic | 50.0% | |
TATCGTGCGCTTTGATACCC+CGG | + | chr3.2:69804578-69804597 | MS.gene25873:CDS | 50.0% | |
TCGATTGCGGACATTCGGTT+GGG | + | chr3.2:69803395-69803414 | MS.gene25873:intron | 50.0% | |
TCGTGAGTCACGACTCAACA+AGG | - | chr3.2:69803661-69803680 | None:intergenic | 50.0% | |
TGGGACCCACCTAATTGGAT+AGG | + | chr3.2:69803027-69803046 | MS.gene25873:intron | 50.0% | |
TGTGCCTTGCCATCAATAGG+TGG | - | chr3.2:69805276-69805295 | None:intergenic | 50.0% | |
TTCGATTGCGGACATTCGGT+TGG | + | chr3.2:69803394-69803413 | MS.gene25873:intron | 50.0% | |
TTGTTGAGTCGTGACTCACG+AGG | + | chr3.2:69803660-69803679 | MS.gene25873:intron | 50.0% | |
TTTGCCAGAGAGACTTTGGC+TGG | + | chr3.2:69804751-69804770 | MS.gene25873:CDS | 50.0% | |
! | ACTCCTTTTCCAGTGACTCC+AGG | - | chr3.2:69806644-69806663 | None:intergenic | 50.0% |
! | GTCCTTGATGGTTTCCCTGA+TGG | + | chr3.2:69802856-69802875 | MS.gene25873:CDS | 50.0% |
! | TAGGGGTCTTATAGGACCCA+TGG | + | chr3.2:69802085-69802104 | MS.gene25873:intron | 50.0% |
!! | CATGTGTCGGTGCTACATAG+AGG | + | chr3.2:69805906-69805925 | MS.gene25873:intron | 50.0% |
!! | CCACCAATATCTGGCTTTGG+AGG | + | chr3.2:69805328-69805347 | MS.gene25873:CDS | 50.0% |
!! | GTCGGTGCTACATAGAGGAA+TGG | + | chr3.2:69805911-69805930 | MS.gene25873:intron | 50.0% |
!! | TGTTTGGTGCCACCAAGAAC+AGG | - | chr3.2:69804055-69804074 | None:intergenic | 50.0% |
AGTTGGGACTAGGGAATGGG+AGG | - | chr3.2:69803634-69803653 | None:intergenic | 55.0% | |
CGAGGAGAGTCTTACGGTAC+TGG | + | chr3.2:69803678-69803697 | MS.gene25873:intron | 55.0% | |
CGGCAGGTCTAGATTCGTGT+TGG | + | chr3.2:69803268-69803287 | MS.gene25873:intron | 55.0% | |
CTAGGGAATGGGAGGAGATG+TGG | - | chr3.2:69803626-69803645 | None:intergenic | 55.0% | |
GCAAGTCAGGGGTTCGATTG+CGG | + | chr3.2:69803382-69803401 | MS.gene25873:intron | 55.0% | |
GGACATTCGGTTGGGATGAG+AGG | + | chr3.2:69803403-69803422 | MS.gene25873:intron | 55.0% | |
GGCCATCAGGGAAACCATCA+AGG | - | chr3.2:69802861-69802880 | None:intergenic | 55.0% | |
GGGGTTCGATTGCGGACATT+CGG | + | chr3.2:69803390-69803409 | MS.gene25873:intron | 55.0% | |
GTGACTCCAGGCCCTGAAAA+TGG | - | chr3.2:69806632-69806651 | None:intergenic | 55.0% | |
TATCCTAGACGCTGTCGCAC+CGG | + | chr3.2:69804082-69804101 | MS.gene25873:CDS | 55.0% | |
TCAGCAAATGCCTCGTCACG+AGG | - | chr3.2:69804330-69804349 | None:intergenic | 55.0% | |
TGATGGTTTCCCTGATGGCC+CGG | + | chr3.2:69802861-69802880 | MS.gene25873:CDS | 55.0% | |
TTCCCGATGGAGTACGTGTC+AGG | - | chr3.2:69802056-69802075 | None:intergenic | 55.0% | |
! | GTGCGACAGCGTCTAGGATA+TGG | - | chr3.2:69804082-69804101 | None:intergenic | 55.0% |
! | GTGTGAGACGCTGAGTTGGA+GGG | + | chr3.2:69802232-69802251 | MS.gene25873:intron | 55.0% |
! | TGTGTGAGACGCTGAGTTGG+AGG | + | chr3.2:69802231-69802250 | MS.gene25873:intron | 55.0% |
!! | TTTTCAGGGCCTGGAGTCAC+TGG | + | chr3.2:69806632-69806651 | MS.gene25873:CDS | 55.0% |
GGCACCAGCCAAAGTCTCTC+TGG | - | chr3.2:69804758-69804777 | None:intergenic | 60.0% | |
GGGCCTGGAGTCACTGGAAA+AGG | + | chr3.2:69806638-69806657 | MS.gene25873:CDS | 60.0% | |
TAAGGTGGACCGGGCCATCA+GGG | - | chr3.2:69802873-69802892 | None:intergenic | 60.0% | |
TTAAGGTGGACCGGGCCATC+AGG | - | chr3.2:69802874-69802893 | None:intergenic | 60.0% | |
! | CGCAGTCACGCACCGGTAGT+TGG | - | chr3.2:69803233-69803252 | None:intergenic | 65.0% |
CGACCGGTGCGACAGCGTCT+AGG | - | chr3.2:69804088-69804107 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 69800683 | 69806685 | 69800683 | ID=MS.gene25873 |
chr3.2 | mRNA | 69800683 | 69806685 | 69800683 | ID=MS.gene25873.t1;Parent=MS.gene25873 |
chr3.2 | exon | 69800683 | 69800845 | 69800683 | ID=MS.gene25873.t1.exon1;Parent=MS.gene25873.t1 |
chr3.2 | CDS | 69800683 | 69800845 | 69800683 | ID=cds.MS.gene25873.t1;Parent=MS.gene25873.t1 |
chr3.2 | exon | 69802689 | 69802957 | 69802689 | ID=MS.gene25873.t1.exon2;Parent=MS.gene25873.t1 |
chr3.2 | CDS | 69802689 | 69802957 | 69802689 | ID=cds.MS.gene25873.t1;Parent=MS.gene25873.t1 |
chr3.2 | exon | 69803884 | 69804124 | 69803884 | ID=MS.gene25873.t1.exon3;Parent=MS.gene25873.t1 |
chr3.2 | CDS | 69803884 | 69804124 | 69803884 | ID=cds.MS.gene25873.t1;Parent=MS.gene25873.t1 |
chr3.2 | exon | 69804286 | 69804612 | 69804286 | ID=MS.gene25873.t1.exon4;Parent=MS.gene25873.t1 |
chr3.2 | CDS | 69804286 | 69804612 | 69804286 | ID=cds.MS.gene25873.t1;Parent=MS.gene25873.t1 |
chr3.2 | exon | 69804719 | 69804804 | 69804719 | ID=MS.gene25873.t1.exon5;Parent=MS.gene25873.t1 |
chr3.2 | CDS | 69804719 | 69804804 | 69804719 | ID=cds.MS.gene25873.t1;Parent=MS.gene25873.t1 |
chr3.2 | exon | 69804909 | 69805019 | 69804909 | ID=MS.gene25873.t1.exon6;Parent=MS.gene25873.t1 |
chr3.2 | CDS | 69804909 | 69805019 | 69804909 | ID=cds.MS.gene25873.t1;Parent=MS.gene25873.t1 |
chr3.2 | exon | 69805108 | 69805409 | 69805108 | ID=MS.gene25873.t1.exon7;Parent=MS.gene25873.t1 |
chr3.2 | CDS | 69805108 | 69805409 | 69805108 | ID=cds.MS.gene25873.t1;Parent=MS.gene25873.t1 |
chr3.2 | exon | 69805492 | 69805758 | 69805492 | ID=MS.gene25873.t1.exon8;Parent=MS.gene25873.t1 |
chr3.2 | CDS | 69805492 | 69805758 | 69805492 | ID=cds.MS.gene25873.t1;Parent=MS.gene25873.t1 |
chr3.2 | exon | 69805926 | 69806685 | 69805926 | ID=MS.gene25873.t1.exon9;Parent=MS.gene25873.t1 |
chr3.2 | CDS | 69805926 | 69806685 | 69805926 | ID=cds.MS.gene25873.t1;Parent=MS.gene25873.t1 |
Gene Sequence |
Protein sequence |