Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26049.t1 | XP_013448460.1 | 86.6 | 619 | 83 | 0 | 14 | 632 | 1 | 619 | 9.20E-306 | 1058.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26049.t1 | P09189 | 65.5 | 618 | 209 | 3 | 14 | 630 | 1 | 615 | 6.0e-229 | 795.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26049.t1 | A0A072TYI4 | 86.6 | 619 | 83 | 0 | 14 | 632 | 1 | 619 | 6.6e-306 | 1058.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050241 | MS.gene26049 | 0.803446 | 3.47E-49 | -1.69E-46 |
| MS.gene050807 | MS.gene26049 | 0.876633 | 1.20E-68 | -1.69E-46 |
| MS.gene050808 | MS.gene26049 | 0.836993 | 6.75E-57 | -1.69E-46 |
| MS.gene051719 | MS.gene26049 | 0.818682 | 1.73E-52 | -1.69E-46 |
| MS.gene051720 | MS.gene26049 | 0.803159 | 3.98E-49 | -1.69E-46 |
| MS.gene052133 | MS.gene26049 | 0.820407 | 6.97E-53 | -1.69E-46 |
| MS.gene052665 | MS.gene26049 | 0.824286 | 8.76E-54 | -1.69E-46 |
| MS.gene052673 | MS.gene26049 | -0.820221 | 7.69E-53 | -1.69E-46 |
| MS.gene053563 | MS.gene26049 | 0.835079 | 2.07E-56 | -1.69E-46 |
| MS.gene053581 | MS.gene26049 | 0.818996 | 1.46E-52 | -1.69E-46 |
| MS.gene056136 | MS.gene26049 | 0.970776 | 3.92E-132 | -1.69E-46 |
| MS.gene058852 | MS.gene26049 | 0.840576 | 8.00E-58 | -1.69E-46 |
| MS.gene059171 | MS.gene26049 | 0.819994 | 8.67E-53 | -1.69E-46 |
| MS.gene060587 | MS.gene26049 | 0.818591 | 1.81E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26049.t1 | MTR_7g451380 | 86.591 | 619 | 83 | 0 | 14 | 632 | 1 | 619 | 0.0 | 1109 |
| MS.gene26049.t1 | MTR_2g038260 | 73.990 | 619 | 158 | 3 | 14 | 631 | 1 | 617 | 0.0 | 950 |
| MS.gene26049.t1 | MTR_7g451360 | 76.537 | 618 | 86 | 2 | 14 | 631 | 1 | 559 | 0.0 | 944 |
| MS.gene26049.t1 | MTR_7g021440 | 72.195 | 615 | 169 | 2 | 14 | 628 | 1 | 613 | 0.0 | 931 |
| MS.gene26049.t1 | MTR_4g079590 | 73.934 | 610 | 158 | 1 | 14 | 623 | 1 | 609 | 0.0 | 927 |
| MS.gene26049.t1 | MTR_2g032550 | 72.258 | 620 | 169 | 3 | 14 | 631 | 1 | 619 | 0.0 | 927 |
| MS.gene26049.t1 | MTR_5g066800 | 72.293 | 628 | 161 | 3 | 14 | 630 | 1 | 626 | 0.0 | 922 |
| MS.gene26049.t1 | MTR_7g025770 | 71.683 | 618 | 174 | 1 | 14 | 631 | 1 | 617 | 0.0 | 913 |
| MS.gene26049.t1 | MTR_7g011590 | 72.330 | 618 | 156 | 3 | 14 | 631 | 1 | 603 | 0.0 | 907 |
| MS.gene26049.t1 | MTR_7g026110 | 70.827 | 617 | 176 | 3 | 14 | 630 | 1 | 613 | 0.0 | 904 |
| MS.gene26049.t1 | MTR_7g026170 | 70.598 | 619 | 179 | 2 | 14 | 631 | 1 | 617 | 0.0 | 898 |
| MS.gene26049.t1 | MTR_7g029415 | 71.014 | 621 | 174 | 4 | 12 | 631 | 8 | 623 | 0.0 | 898 |
| MS.gene26049.t1 | MTR_2g437440 | 70.388 | 618 | 165 | 1 | 14 | 631 | 1 | 600 | 0.0 | 897 |
| MS.gene26049.t1 | MTR_2g022050 | 71.359 | 618 | 177 | 0 | 14 | 631 | 1 | 618 | 0.0 | 894 |
| MS.gene26049.t1 | MTR_7g074460 | 71.475 | 617 | 156 | 3 | 14 | 630 | 1 | 597 | 0.0 | 882 |
| MS.gene26049.t1 | MTR_2g038270 | 68.949 | 628 | 183 | 5 | 14 | 631 | 1 | 626 | 0.0 | 880 |
| MS.gene26049.t1 | MTR_8g103930 | 68.413 | 630 | 168 | 6 | 14 | 630 | 1 | 612 | 0.0 | 861 |
| MS.gene26049.t1 | MTR_7g026130 | 69.021 | 623 | 179 | 5 | 14 | 628 | 1 | 617 | 0.0 | 853 |
| MS.gene26049.t1 | MTR_7g026130 | 48.810 | 84 | 41 | 1 | 547 | 628 | 620 | 703 | 4.14e-14 | 76.3 |
| MS.gene26049.t1 | MTR_7g026140 | 68.506 | 616 | 175 | 4 | 14 | 628 | 1 | 598 | 0.0 | 849 |
| MS.gene26049.t1 | MTR_4g027145 | 66.561 | 631 | 196 | 4 | 14 | 631 | 1 | 629 | 0.0 | 845 |
| MS.gene26049.t1 | MTR_2g032580 | 67.367 | 619 | 169 | 3 | 14 | 631 | 1 | 587 | 0.0 | 838 |
| MS.gene26049.t1 | MTR_7g024390 | 66.559 | 619 | 201 | 5 | 14 | 630 | 1 | 615 | 0.0 | 832 |
| MS.gene26049.t1 | MTR_1g017130 | 66.612 | 614 | 164 | 3 | 14 | 627 | 1 | 573 | 0.0 | 829 |
| MS.gene26049.t1 | MTR_7g025720 | 64.830 | 617 | 214 | 2 | 14 | 630 | 1 | 614 | 0.0 | 824 |
| MS.gene26049.t1 | MTR_4g063720 | 65.267 | 619 | 209 | 5 | 14 | 630 | 1 | 615 | 0.0 | 822 |
| MS.gene26049.t1 | MTR_4g063710 | 65.428 | 619 | 208 | 5 | 14 | 630 | 1 | 615 | 0.0 | 821 |
| MS.gene26049.t1 | MTR_7g024580 | 65.105 | 619 | 210 | 5 | 14 | 630 | 1 | 615 | 0.0 | 819 |
| MS.gene26049.t1 | MTR_7g099680 | 64.943 | 619 | 211 | 5 | 14 | 630 | 1 | 615 | 0.0 | 817 |
| MS.gene26049.t1 | MTR_7g025760 | 63.695 | 617 | 222 | 2 | 14 | 630 | 1 | 615 | 0.0 | 813 |
| MS.gene26049.t1 | MTR_7g025620 | 63.636 | 616 | 221 | 2 | 14 | 629 | 1 | 613 | 0.0 | 809 |
| MS.gene26049.t1 | MTR_7g024030 | 64.274 | 613 | 214 | 3 | 14 | 625 | 1 | 609 | 0.0 | 806 |
| MS.gene26049.t1 | MTR_8g032650 | 64.019 | 617 | 219 | 2 | 14 | 630 | 1 | 614 | 0.0 | 805 |
| MS.gene26049.t1 | MTR_7g026030 | 63.371 | 617 | 223 | 2 | 14 | 630 | 1 | 614 | 0.0 | 805 |
| MS.gene26049.t1 | MTR_7g007000 | 65.478 | 617 | 166 | 5 | 14 | 628 | 1 | 572 | 0.0 | 803 |
| MS.gene26049.t1 | MTR_7g026090 | 64.228 | 615 | 216 | 3 | 14 | 628 | 1 | 611 | 0.0 | 794 |
| MS.gene26049.t1 | MTR_7g025820 | 65.025 | 589 | 205 | 1 | 14 | 602 | 1 | 588 | 0.0 | 791 |
| MS.gene26049.t1 | MTR_7g025790 | 61.912 | 617 | 232 | 2 | 14 | 630 | 1 | 614 | 0.0 | 786 |
| MS.gene26049.t1 | MTR_4g130540 | 62.682 | 619 | 224 | 6 | 14 | 630 | 1 | 614 | 0.0 | 785 |
| MS.gene26049.t1 | MTR_7g035155 | 64.563 | 618 | 164 | 4 | 14 | 631 | 1 | 563 | 0.0 | 783 |
| MS.gene26049.t1 | MTR_7g025740 | 61.774 | 620 | 227 | 5 | 14 | 625 | 1 | 618 | 0.0 | 774 |
| MS.gene26049.t1 | MTR_7g078190 | 61.935 | 620 | 231 | 4 | 14 | 630 | 1 | 618 | 0.0 | 773 |
| MS.gene26049.t1 | MTR_7g078210 | 63.166 | 619 | 224 | 3 | 14 | 630 | 1 | 617 | 0.0 | 771 |
| MS.gene26049.t1 | MTR_7g025630 | 62.399 | 617 | 215 | 4 | 14 | 630 | 1 | 600 | 0.0 | 763 |
| MS.gene26049.t1 | MTR_1g041565 | 62.866 | 614 | 155 | 7 | 19 | 631 | 2 | 543 | 0.0 | 745 |
| MS.gene26049.t1 | MTR_7g025260 | 61.821 | 571 | 212 | 5 | 63 | 630 | 20 | 587 | 0.0 | 715 |
| MS.gene26049.t1 | MTR_6g033850 | 57.120 | 618 | 260 | 4 | 14 | 630 | 1 | 614 | 0.0 | 696 |
| MS.gene26049.t1 | MTR_6g033760 | 57.282 | 618 | 259 | 4 | 14 | 630 | 1 | 614 | 0.0 | 679 |
| MS.gene26049.t1 | MTR_6g033870 | 55.772 | 615 | 263 | 5 | 22 | 630 | 10 | 621 | 0.0 | 661 |
| MS.gene26049.t1 | MTR_6g033820 | 54.414 | 623 | 274 | 5 | 14 | 630 | 1 | 619 | 0.0 | 652 |
| MS.gene26049.t1 | MTR_2g032160 | 78.400 | 375 | 81 | 0 | 14 | 388 | 1 | 375 | 0.0 | 635 |
| MS.gene26049.t1 | MTR_2g032160 | 47.794 | 136 | 58 | 2 | 506 | 630 | 329 | 462 | 2.13e-25 | 110 |
| MS.gene26049.t1 | MTR_8g099945 | 54.839 | 589 | 255 | 8 | 20 | 604 | 36 | 617 | 0.0 | 634 |
| MS.gene26049.t1 | MTR_6g033955 | 54.146 | 615 | 272 | 5 | 22 | 630 | 9 | 619 | 0.0 | 633 |
| MS.gene26049.t1 | MTR_8g099795 | 55.008 | 589 | 254 | 8 | 20 | 604 | 36 | 617 | 0.0 | 633 |
| MS.gene26049.t1 | MTR_2g017730 | 57.219 | 561 | 231 | 4 | 22 | 575 | 8 | 566 | 0.0 | 631 |
| MS.gene26049.t1 | MTR_4g063720 | 54.443 | 619 | 205 | 10 | 14 | 630 | 1 | 544 | 0.0 | 618 |
| MS.gene26049.t1 | MTR_6g033800 | 54.302 | 523 | 236 | 3 | 108 | 630 | 4 | 523 | 0.0 | 559 |
| MS.gene26049.t1 | MTR_2g040370 | 68.020 | 394 | 122 | 2 | 16 | 409 | 1023 | 1412 | 7.80e-180 | 555 |
| MS.gene26049.t1 | MTR_2g040370 | 66.581 | 389 | 125 | 3 | 16 | 403 | 1407 | 1791 | 1.36e-165 | 517 |
| MS.gene26049.t1 | MTR_2g040370 | 68.020 | 394 | 122 | 2 | 16 | 409 | 1023 | 1412 | 1.82e-179 | 555 |
| MS.gene26049.t1 | MTR_2g040370 | 66.495 | 388 | 125 | 3 | 16 | 402 | 1407 | 1790 | 2.45e-164 | 514 |
| MS.gene26049.t1 | MTR_2g040260 | 65.757 | 403 | 133 | 3 | 13 | 414 | 1029 | 1427 | 1.67e-178 | 546 |
| MS.gene26049.t1 | MTR_2g040160 | 65.012 | 403 | 136 | 3 | 13 | 414 | 1100 | 1498 | 5.74e-176 | 540 |
| MS.gene26049.t1 | MTR_2g040350 | 65.075 | 398 | 130 | 4 | 22 | 414 | 820 | 1213 | 8.85e-170 | 517 |
| MS.gene26049.t1 | MTR_2g040220 | 64.615 | 390 | 134 | 2 | 12 | 399 | 1008 | 1395 | 1.28e-168 | 521 |
| MS.gene26049.t1 | MTR_2g040220 | 51.020 | 98 | 39 | 3 | 460 | 549 | 1397 | 1493 | 4.24e-19 | 92.8 |
| MS.gene26049.t1 | MTR_1g077230 | 81.560 | 282 | 52 | 0 | 14 | 295 | 1 | 282 | 5.06e-168 | 481 |
| MS.gene26049.t1 | MTR_2g040350 | 65.075 | 398 | 130 | 4 | 22 | 414 | 1038 | 1431 | 7.07e-168 | 517 |
| MS.gene26049.t1 | MTR_2g010020 | 45.681 | 602 | 297 | 13 | 2 | 595 | 37 | 616 | 1.43e-165 | 489 |
| MS.gene26049.t1 | MTR_2g010020 | 45.681 | 602 | 297 | 13 | 2 | 595 | 36 | 615 | 1.46e-165 | 489 |
| MS.gene26049.t1 | MTR_4g092920 | 45.626 | 583 | 284 | 14 | 23 | 595 | 54 | 613 | 2.12e-158 | 471 |
| MS.gene26049.t1 | MTR_7g026050 | 62.234 | 376 | 111 | 4 | 258 | 631 | 1 | 347 | 1.91e-156 | 454 |
| MS.gene26049.t1 | MTR_2g005690 | 45.975 | 559 | 280 | 11 | 23 | 575 | 72 | 614 | 7.04e-154 | 460 |
| MS.gene26049.t1 | MTR_2g031670 | 55.746 | 409 | 89 | 4 | 16 | 424 | 26 | 342 | 1.23e-143 | 421 |
| MS.gene26049.t1 | MTR_7g026080 | 77.959 | 245 | 54 | 0 | 14 | 258 | 1 | 245 | 3.45e-141 | 411 |
| MS.gene26049.t1 | MTR_6g034005 | 43.773 | 546 | 286 | 7 | 95 | 630 | 2 | 536 | 1.13e-138 | 421 |
| MS.gene26049.t1 | MTR_4g088515 | 74.194 | 248 | 46 | 1 | 22 | 269 | 276 | 505 | 1.16e-127 | 390 |
| MS.gene26049.t1 | MTR_4g088515 | 75.758 | 99 | 24 | 0 | 352 | 450 | 521 | 619 | 6.94e-40 | 155 |
| MS.gene26049.t1 | MTR_4g092920 | 43.976 | 498 | 249 | 12 | 107 | 595 | 3 | 479 | 5.74e-126 | 383 |
| MS.gene26049.t1 | MTR_1g077240 | 62.963 | 297 | 102 | 2 | 335 | 631 | 1 | 289 | 9.86e-116 | 347 |
| MS.gene26049.t1 | MTR_6g033810 | 53.355 | 313 | 97 | 2 | 113 | 424 | 22 | 286 | 2.62e-102 | 313 |
| MS.gene26049.t1 | MTR_6g478100 | 68.868 | 212 | 52 | 2 | 51 | 262 | 10 | 207 | 2.37e-95 | 296 |
| MS.gene26049.t1 | MTR_6g478100 | 57.895 | 95 | 40 | 0 | 529 | 623 | 208 | 302 | 5.87e-29 | 118 |
| MS.gene26049.t1 | MTR_6g033855 | 46.281 | 363 | 110 | 3 | 113 | 475 | 22 | 299 | 2.61e-95 | 296 |
| MS.gene26049.t1 | MTR_7g451390 | 77.596 | 183 | 40 | 1 | 449 | 631 | 9 | 190 | 3.23e-95 | 291 |
| MS.gene26049.t1 | MTR_5g097190 | 59.839 | 249 | 53 | 3 | 16 | 264 | 152 | 353 | 2.97e-91 | 287 |
| MS.gene26049.t1 | MTR_7g074540 | 64.179 | 201 | 70 | 2 | 430 | 630 | 1 | 199 | 1.46e-80 | 253 |
| MS.gene26049.t1 | MTR_1g116250 | 52.768 | 271 | 87 | 3 | 361 | 631 | 60 | 289 | 1.17e-75 | 244 |
| MS.gene26049.t1 | MTR_4g012050 | 31.568 | 472 | 303 | 9 | 23 | 479 | 4 | 470 | 2.14e-74 | 255 |
| MS.gene26049.t1 | MTR_2g102180 | 31.780 | 472 | 300 | 10 | 23 | 479 | 4 | 468 | 2.67e-72 | 249 |
| MS.gene26049.t1 | MTR_3g051300 | 30.470 | 489 | 332 | 7 | 23 | 510 | 4 | 485 | 1.39e-70 | 243 |
| MS.gene26049.t1 | MTR_5g006180 | 33.730 | 504 | 292 | 15 | 22 | 508 | 29 | 507 | 1.82e-70 | 238 |
| MS.gene26049.t1 | MTR_1207s0010 | 62.500 | 176 | 65 | 1 | 121 | 296 | 1 | 175 | 6.01e-70 | 224 |
| MS.gene26049.t1 | MTR_5g092570 | 30.661 | 499 | 324 | 9 | 23 | 510 | 4 | 491 | 1.24e-66 | 233 |
| MS.gene26049.t1 | MTR_7g026180 | 84.034 | 119 | 19 | 0 | 91 | 209 | 23 | 141 | 7.11e-65 | 217 |
| MS.gene26049.t1 | MTR_7g026180 | 40.826 | 218 | 97 | 3 | 415 | 631 | 144 | 330 | 6.13e-40 | 149 |
| MS.gene26049.t1 | MTR_5g090110 | 31.753 | 485 | 288 | 13 | 22 | 493 | 28 | 482 | 8.82e-59 | 206 |
| MS.gene26049.t1 | MTR_3g081170 | 27.186 | 526 | 345 | 11 | 20 | 512 | 24 | 544 | 1.15e-56 | 206 |
| MS.gene26049.t1 | MTR_4g115780 | 33.588 | 524 | 307 | 17 | 22 | 517 | 140 | 650 | 2.82e-56 | 202 |
| MS.gene26049.t1 | MTR_5g005870 | 38.721 | 297 | 163 | 6 | 311 | 601 | 68 | 351 | 8.48e-56 | 195 |
| MS.gene26049.t1 | MTR_6g033910 | 44.978 | 229 | 63 | 4 | 87 | 313 | 19 | 186 | 4.38e-49 | 169 |
| MS.gene26049.t1 | MTR_2g040355 | 33.652 | 419 | 120 | 12 | 212 | 630 | 10 | 270 | 1.17e-48 | 172 |
| MS.gene26049.t1 | MTR_4g107920 | 27.416 | 507 | 330 | 14 | 23 | 511 | 21 | 507 | 5.84e-45 | 168 |
| MS.gene26049.t1 | MTR_1g068900 | 54.930 | 142 | 59 | 2 | 444 | 582 | 26 | 165 | 1.88e-43 | 154 |
| MS.gene26049.t1 | MTR_5g005890 | 36.404 | 228 | 92 | 5 | 87 | 312 | 5 | 181 | 4.73e-37 | 136 |
| MS.gene26049.t1 | MTR_4g027235 | 77.333 | 75 | 17 | 0 | 14 | 88 | 1 | 75 | 3.76e-36 | 130 |
| MS.gene26049.t1 | MTR_4g027085 | 77.333 | 75 | 17 | 0 | 14 | 88 | 1 | 75 | 3.76e-36 | 130 |
| MS.gene26049.t1 | MTR_7g026095 | 61.111 | 90 | 35 | 0 | 496 | 585 | 256 | 345 | 3.78e-30 | 122 |
| MS.gene26049.t1 | MTR_7g026095 | 55.056 | 89 | 24 | 2 | 100 | 188 | 188 | 260 | 6.31e-21 | 95.1 |
| MS.gene26049.t1 | MTR_7g026190 | 60.396 | 101 | 31 | 2 | 294 | 394 | 2 | 93 | 4.85e-30 | 118 |
| MS.gene26049.t1 | MTR_7g026190 | 45.528 | 123 | 59 | 2 | 512 | 632 | 94 | 210 | 1.61e-23 | 99.4 |
| MS.gene26049.t1 | MTR_6g033805 | 65.753 | 73 | 23 | 1 | 14 | 86 | 1 | 71 | 3.98e-26 | 102 |
| MS.gene26049.t1 | MTR_2g017710 | 33.984 | 256 | 83 | 7 | 238 | 490 | 17 | 189 | 2.22e-24 | 103 |
| MS.gene26049.t1 | MTR_4g115860 | 40.860 | 93 | 53 | 2 | 410 | 501 | 29 | 120 | 2.69e-15 | 73.2 |
| MS.gene26049.t1 | MTR_7g021430 | 48.571 | 70 | 36 | 0 | 228 | 297 | 1 | 70 | 5.68e-15 | 74.3 |
| MS.gene26049.t1 | MTR_3g114360 | 49.451 | 91 | 29 | 2 | 463 | 553 | 192 | 265 | 1.15e-12 | 68.9 |
| MS.gene26049.t1 | MTR_7g026160 | 37.500 | 128 | 42 | 4 | 311 | 406 | 72 | 193 | 3.82e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26049.t1 | AT3G12580 | 64.782 | 619 | 212 | 5 | 14 | 630 | 1 | 615 | 0.0 | 816 |
| MS.gene26049.t1 | AT5G02500 | 64.136 | 619 | 216 | 5 | 14 | 630 | 1 | 615 | 0.0 | 811 |
| MS.gene26049.t1 | AT3G09440 | 63.974 | 619 | 217 | 5 | 14 | 630 | 1 | 615 | 0.0 | 804 |
| MS.gene26049.t1 | AT3G09440 | 63.974 | 619 | 217 | 5 | 14 | 630 | 1 | 615 | 0.0 | 804 |
| MS.gene26049.t1 | AT3G09440 | 63.974 | 619 | 217 | 5 | 14 | 630 | 1 | 615 | 0.0 | 804 |
| MS.gene26049.t1 | AT3G09440 | 63.974 | 619 | 217 | 5 | 14 | 630 | 1 | 615 | 0.0 | 804 |
| MS.gene26049.t1 | AT5G02490 | 63.651 | 619 | 219 | 5 | 14 | 630 | 1 | 615 | 0.0 | 802 |
| MS.gene26049.t1 | AT1G56410 | 64.297 | 619 | 213 | 6 | 14 | 630 | 1 | 613 | 0.0 | 795 |
| MS.gene26049.t1 | AT1G16030 | 62.197 | 619 | 227 | 6 | 14 | 630 | 1 | 614 | 0.0 | 777 |
| MS.gene26049.t1 | AT5G28540 | 54.812 | 613 | 265 | 9 | 20 | 628 | 35 | 639 | 0.0 | 645 |
| MS.gene26049.t1 | AT5G42020 | 53.555 | 633 | 276 | 11 | 6 | 628 | 15 | 639 | 0.0 | 644 |
| MS.gene26049.t1 | AT5G42020 | 54.649 | 613 | 266 | 9 | 20 | 628 | 40 | 644 | 0.0 | 643 |
| MS.gene26049.t1 | AT1G09080 | 54.575 | 612 | 267 | 8 | 20 | 628 | 40 | 643 | 0.0 | 629 |
| MS.gene26049.t1 | AT1G09080 | 54.575 | 612 | 267 | 8 | 20 | 628 | 50 | 653 | 0.0 | 629 |
| MS.gene26049.t1 | AT5G02500 | 73.077 | 390 | 103 | 1 | 14 | 403 | 1 | 388 | 0.0 | 610 |
| MS.gene26049.t1 | AT5G42020 | 57.256 | 503 | 199 | 9 | 6 | 499 | 15 | 510 | 0.0 | 562 |
| MS.gene26049.t1 | AT5G09590 | 45.783 | 581 | 286 | 13 | 23 | 595 | 60 | 619 | 4.90e-156 | 465 |
| MS.gene26049.t1 | AT4G37910 | 46.816 | 581 | 280 | 13 | 23 | 595 | 55 | 614 | 5.30e-154 | 460 |
| MS.gene26049.t1 | AT4G37910 | 46.816 | 581 | 280 | 13 | 23 | 595 | 55 | 614 | 5.30e-154 | 460 |
| MS.gene26049.t1 | AT4G24280 | 45.296 | 574 | 290 | 12 | 23 | 590 | 81 | 636 | 5.65e-154 | 461 |
| MS.gene26049.t1 | AT5G49910 | 45.975 | 559 | 280 | 11 | 23 | 575 | 81 | 623 | 1.76e-151 | 454 |
| MS.gene26049.t1 | AT1G79930 | 32.211 | 475 | 302 | 8 | 23 | 482 | 4 | 473 | 3.11e-75 | 256 |
| MS.gene26049.t1 | AT2G32120 | 33.138 | 513 | 312 | 10 | 22 | 521 | 30 | 524 | 6.01e-75 | 250 |
| MS.gene26049.t1 | AT2G32120 | 33.138 | 513 | 312 | 10 | 22 | 521 | 30 | 524 | 6.01e-75 | 250 |
| MS.gene26049.t1 | AT1G79920 | 32.421 | 475 | 301 | 8 | 23 | 482 | 4 | 473 | 6.44e-75 | 254 |
| MS.gene26049.t1 | AT1G79920 | 32.421 | 475 | 301 | 8 | 23 | 482 | 4 | 473 | 7.82e-75 | 254 |
| MS.gene26049.t1 | AT1G79920 | 32.421 | 475 | 301 | 8 | 23 | 482 | 4 | 473 | 7.82e-75 | 254 |
| MS.gene26049.t1 | AT1G79920 | 32.421 | 475 | 301 | 8 | 23 | 482 | 4 | 473 | 7.82e-75 | 254 |
| MS.gene26049.t1 | AT1G79930 | 32.211 | 475 | 302 | 8 | 23 | 482 | 4 | 473 | 1.24e-74 | 256 |
| MS.gene26049.t1 | AT1G11660 | 33.911 | 404 | 259 | 7 | 23 | 423 | 4 | 402 | 4.45e-70 | 242 |
| MS.gene26049.t1 | AT1G11660 | 33.911 | 404 | 259 | 7 | 23 | 423 | 4 | 402 | 4.45e-70 | 242 |
| MS.gene26049.t1 | AT1G11660 | 33.911 | 404 | 259 | 7 | 23 | 423 | 4 | 402 | 4.45e-70 | 242 |
| MS.gene26049.t1 | AT1G11660 | 34.239 | 368 | 236 | 5 | 59 | 423 | 1 | 365 | 8.07e-63 | 221 |
| MS.gene26049.t1 | AT4G16660 | 26.857 | 525 | 349 | 10 | 19 | 512 | 23 | 543 | 2.69e-59 | 213 |
| MS.gene26049.t1 | AT4G16660 | 26.857 | 525 | 349 | 10 | 19 | 512 | 47 | 567 | 2.80e-59 | 214 |
Find 131 sgRNAs with CRISPR-Local
Find 174 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGGTTCTTTCACTCTTTC+TGG | 0.008941 | 7.4:-54096761 | MS.gene26049:CDS |
| TCAACACCATTTGGTGTTTC+TGG | 0.103705 | 7.4:-54098674 | MS.gene26049:CDS |
| CTCAACCTCCTTAGGGCTTT+TGG | 0.111076 | 7.4:+54097355 | None:intergenic |
| TGAGGTCGATGCTTTGTTTC+AGG | 0.236745 | 7.4:-54097278 | MS.gene26049:CDS |
| TCCTTGTTGGTGGATCTTCT+AGG | 0.269778 | 7.4:-54097120 | MS.gene26049:CDS |
| TGCAATAGTTGCTGCACTTT+AGG | 0.278166 | 7.4:+54097094 | None:intergenic |
| GCAAGTGACAATCATCTTCT+TGG | 0.280969 | 7.4:-54096779 | MS.gene26049:CDS |
| ACAGATGCCAAGAGGCTAAT+TGG | 0.308993 | 7.4:-54097931 | MS.gene26049:intron |
| CCTGATGAGGCAATTGCTTA+TGG | 0.315040 | 7.4:-54097031 | MS.gene26049:CDS |
| ACGCAGTTCTCAACCTCCTT+AGG | 0.321307 | 7.4:+54097347 | None:intergenic |
| AGTATGTATGAGCGCATTAT+AGG | 0.322524 | 7.4:-54096323 | MS.gene26049:CDS |
| ACATCAATCAACACCAAGTT+TGG | 0.324598 | 7.4:+54096962 | None:intergenic |
| GGAGATTGCAGAGGCATATC+TGG | 0.336106 | 7.4:-54097746 | MS.gene26049:CDS |
| TGTGTCTCTTCTTACAATTA+AGG | 0.339763 | 7.4:-54097506 | MS.gene26049:CDS |
| AACCCAGAAAACACTGTCTT+TGG | 0.348697 | 7.4:-54098288 | MS.gene26049:intron |
| AAACATGATTCAACACCATT+TGG | 0.352346 | 7.4:-54098683 | None:intergenic |
| ATAGATGCTGGTGTCATTGC+TGG | 0.352626 | 7.4:-54097655 | MS.gene26049:CDS |
| AAATGAAAGTGATGTTCTTC+AGG | 0.352646 | 7.4:-54096366 | MS.gene26049:CDS |
| GTTGATGATGTTGTCCTTGT+TGG | 0.355323 | 7.4:-54097133 | MS.gene26049:CDS |
| CCATAAGCAATTGCCTCATC+AGG | 0.361201 | 7.4:+54097031 | None:intergenic |
| TAAAGTGCAGCAACTATTGC+AGG | 0.380400 | 7.4:-54097092 | MS.gene26049:CDS |
| TGCTGAGGAAATCTCGTCTA+TGG | 0.383573 | 7.4:-54097785 | MS.gene26049:CDS |
| AGCAATGACACCAGCATCTA+TGG | 0.384494 | 7.4:+54097657 | None:intergenic |
| TGCTTATGGCGCAGCTGTCC+AGG | 0.385814 | 7.4:-54097017 | MS.gene26049:CDS |
| TGCTTTGATGTCAATCAAAA+TGG | 0.391036 | 7.4:-54096698 | MS.gene26049:CDS |
| CGCAGTTCTCAACCTCCTTA+GGG | 0.394218 | 7.4:+54097348 | None:intergenic |
| CTGCGTGCGAGAAGGCAAAA+AGG | 0.396025 | 7.4:-54097330 | MS.gene26049:CDS |
| CTCCTGTCCCTTGTACTTGA+GGG | 0.399012 | 7.4:+54097819 | None:intergenic |
| CTGGTGGAAACACTCACCTT+GGG | 0.401415 | 7.4:-54097459 | MS.gene26049:CDS |
| TCTTCTTACAATTAAGGATA+AGG | 0.404002 | 7.4:-54097500 | MS.gene26049:CDS |
| AATTGTTTCGTCTTCTTGAC+AGG | 0.409676 | 7.4:+54096866 | None:intergenic |
| GCTCAAGAGGAACGGTTGAT+TGG | 0.410428 | 7.4:-54098339 | MS.gene26049:CDS |
| TCTCCATGCACTCATTAAAA+AGG | 0.412944 | 7.4:+54097200 | None:intergenic |
| GATGTTGCACCACTGTCTCT+TGG | 0.420444 | 7.4:-54096944 | MS.gene26049:CDS |
| GGATAAGGTCTTCGAAGTTA+AGG | 0.423231 | 7.4:-54097485 | MS.gene26049:CDS |
| GGATGGCCACGAGCAGCTGC+AGG | 0.428028 | 7.4:+54096731 | None:intergenic |
| TGTCTTGATTAATGTTTATG+AGG | 0.429671 | 7.4:-54096816 | MS.gene26049:CDS |
| TGGCCATTCAAAGTCATTGC+GGG | 0.433971 | 7.4:-54097865 | MS.gene26049:CDS |
| AATCTCTCGTGCAAAGTTTG+AGG | 0.447581 | 7.4:-54097236 | MS.gene26049:CDS |
| ATCAAGCAAATTTGCGGCCA+CGG | 0.447678 | 7.4:+54096403 | None:intergenic |
| CTTCCTACCAATTAGCCTCT+TGG | 0.451481 | 7.4:+54097924 | None:intergenic |
| AGATGATTGTCACTTGCTCT+TGG | 0.452190 | 7.4:+54096785 | None:intergenic |
| GAACTGACTGTGATGGTAAA+CGG | 0.453960 | 7.4:-54097567 | MS.gene26049:CDS |
| CACCTCGAATGTTCCAAACT+TGG | 0.456873 | 7.4:-54096975 | MS.gene26049:CDS |
| ACACCCGCAATGACTTTGAA+TGG | 0.458605 | 7.4:+54097862 | None:intergenic |
| GACATTATTCACAATGATCA+AGG | 0.459526 | 7.4:-54098393 | MS.gene26049:CDS |
| CTATTGCAGGACTTCTTCTA+CGG | 0.461154 | 7.4:-54097079 | MS.gene26049:CDS |
| GAGGTCGATGCTTTGTTTCA+GGG | 0.461220 | 7.4:-54097277 | MS.gene26049:CDS |
| CTTTGTTGCTTTCGCTCAAG+AGG | 0.462984 | 7.4:-54098352 | MS.gene26049:CDS |
| GATGATGTTGTCCTTGTTGG+TGG | 0.468097 | 7.4:-54097130 | MS.gene26049:CDS |
| TTTGTCTTTGACCTTGGTGG+TGG | 0.469354 | 7.4:-54097538 | MS.gene26049:CDS |
| ACATCAAAGCATACATCAAA+AGG | 0.475211 | 7.4:+54096710 | None:intergenic |
| TGAGAATCGTTGAAATAAGC+AGG | 0.477964 | 7.4:+54097691 | None:intergenic |
| GAGGCTTACCGTATCGATGA+TGG | 0.482339 | 7.4:-54096560 | MS.gene26049:CDS |
| TCTCCTGTCCCTTGTACTTG+AGG | 0.482957 | 7.4:+54097818 | None:intergenic |
| TTGCACCACTGTCTCTTGGT+TGG | 0.483274 | 7.4:-54096940 | MS.gene26049:CDS |
| ACTGCTGCAGCTATTGCATA+TGG | 0.483888 | 7.4:-54097601 | MS.gene26049:CDS |
| ATTCACATCAAGCAAATTTG+CGG | 0.488444 | 7.4:+54096397 | None:intergenic |
| GGCTGAAGTCATGAATGCTC+TGG | 0.489484 | 7.4:-54096522 | MS.gene26049:CDS |
| TTGTCTTTGACCTTGGTGGT+GGG | 0.491381 | 7.4:-54097537 | MS.gene26049:CDS |
| GTCCAGGCTGCTTTGTTGAG+TGG | 0.494089 | 7.4:-54097001 | MS.gene26049:CDS |
| AGAGGACTTTGATAATAGAA+TGG | 0.500038 | 7.4:-54097434 | MS.gene26049:CDS |
| AAAGTTTGAGGAGATCAATA+TGG | 0.505480 | 7.4:-54097224 | MS.gene26049:CDS |
| TTTCGTCTTCTTGACAGGAA+TGG | 0.511698 | 7.4:+54096871 | None:intergenic |
| AAAGATGAAGGATGTGCCAT+TGG | 0.515292 | 7.4:-54098477 | MS.gene26049:CDS |
| GTCTTCGAAGTTAAGGCCAC+TGG | 0.522470 | 7.4:-54097478 | MS.gene26049:CDS |
| CATTATAGGCAAGTCCTGCT+AGG | 0.523311 | 7.4:-54096309 | None:intergenic |
| GAGAAATGTGTTGAAGAAGA+AGG | 0.531211 | 7.4:-54096480 | MS.gene26049:CDS |
| CACCAAGTTTGGAACATTCG+AGG | 0.533491 | 7.4:+54096973 | None:intergenic |
| TTCCCTCAAGTACAAGGGAC+AGG | 0.533865 | 7.4:-54097821 | MS.gene26049:CDS |
| GATGATTTCCCTCAAGTACA+AGG | 0.534895 | 7.4:-54097827 | MS.gene26049:CDS |
| AAGCTCGTTCTTACTGCCAG+TGG | 0.534933 | 7.4:+54096646 | None:intergenic |
| ACTGGTGGAAACACTCACCT+TGG | 0.538678 | 7.4:-54097460 | MS.gene26049:CDS |
| TGATGGGAAATTCTTGAGAA+AGG | 0.545073 | 7.4:-54096543 | MS.gene26049:CDS |
| AAGGTGAGTGTTTCCACCAG+TGG | 0.547001 | 7.4:+54097462 | None:intergenic |
| AGAAAAGCCACCATAGATGC+TGG | 0.548590 | 7.4:-54097667 | MS.gene26049:CDS |
| TGCTGTTGTCACCAATGTTG+AGG | 0.549124 | 7.4:-54097296 | MS.gene26049:CDS |
| AGAGGCATATCTGGAATCAC+TGG | 0.554460 | 7.4:-54097737 | MS.gene26049:CDS |
| TATGCAATAGCTGCAGCAGT+TGG | 0.558562 | 7.4:+54097604 | None:intergenic |
| GTCTTGATTAATGTTTATGA+GGG | 0.559792 | 7.4:-54096815 | MS.gene26049:CDS |
| TTGCTTTCGCTCAAGAGGAA+CGG | 0.559950 | 7.4:-54098347 | MS.gene26049:CDS |
| AAGATTGATTGAAGAAGCTG+AGG | 0.562890 | 7.4:-54096579 | MS.gene26049:CDS |
| AGGCTTACCGTATCGATGAT+GGG | 0.568194 | 7.4:-54096559 | MS.gene26049:CDS |
| AGAATTTCCCATCATCGATA+CGG | 0.568365 | 7.4:+54096552 | None:intergenic |
| TGAGCGAAAGCAACAAAGGA+AGG | 0.574959 | 7.4:+54098357 | None:intergenic |
| GATGGCCACGAGCAGCTGCA+GGG | 0.575202 | 7.4:+54096732 | None:intergenic |
| TTCGAAGTTAAGGCCACTGG+TGG | 0.576585 | 7.4:-54097475 | MS.gene26049:CDS |
| TATGGTACTCACAAAGATGC+GGG | 0.579590 | 7.4:-54097767 | MS.gene26049:CDS |
| CAAAGCATCGACCTCAACAT+TGG | 0.580273 | 7.4:+54097285 | None:intergenic |
| TACTCTCAAGCTCATTCAAG+TGG | 0.582438 | 7.4:+54096342 | None:intergenic |
| CTCTTGAGCGAAAGCAACAA+AGG | 0.582705 | 7.4:+54098353 | None:intergenic |
| ATGGCCACGAGCAGCTGCAG+GGG | 0.583174 | 7.4:+54096733 | None:intergenic |
| TCTGCTATGGACAAATCCAC+TGG | 0.583359 | 7.4:-54096662 | MS.gene26049:CDS |
| TGCAGGCCAGAAACACCAAA+TGG | 0.583490 | 7.4:+54098668 | None:intergenic |
| CAATAATCAATGACAAAGGA+AGG | 0.585916 | 7.4:-54096622 | MS.gene26049:CDS |
| ACAGGAATGGAAGTGTTCCT+CGG | 0.591496 | 7.4:+54096884 | None:intergenic |
| GTTGAGAACTGCGTGCGAGA+AGG | 0.591918 | 7.4:-54097338 | MS.gene26049:CDS |
| TTGGGAACCCAAAAGCCCTA+AGG | 0.593146 | 7.4:-54097363 | MS.gene26049:CDS |
| CATAAGCAATTGCCTCATCA+GGG | 0.597298 | 7.4:+54097032 | None:intergenic |
| TTCCACTCAACAAAGCAGCC+TGG | 0.598415 | 7.4:+54096999 | None:intergenic |
| TGGTGGAAACACTCACCTTG+GGG | 0.601557 | 7.4:-54097458 | MS.gene26049:CDS |
| TATTGCAGGACTTCTTCTAC+GGG | 0.603960 | 7.4:-54097078 | MS.gene26049:CDS |
| ATGCCAAGAGGCTAATTGGT+AGG | 0.605854 | 7.4:-54097927 | MS.gene26049:CDS |
| GCAGGACTTCTTCTACGGGA+AGG | 0.609093 | 7.4:-54097074 | MS.gene26049:CDS |
| CAAAGCATACATCAAAAGGA+TGG | 0.615551 | 7.4:+54096714 | None:intergenic |
| TGGCCACGAGCAGCTGCAGG+GGG | 0.617063 | 7.4:+54096734 | None:intergenic |
| TGTGCCATTGGAATAGACCT+TGG | 0.619321 | 7.4:-54098465 | MS.gene26049:CDS |
| TAGGAAGTTTACTGATCCTG+TGG | 0.621004 | 7.4:-54097908 | MS.gene26049:CDS |
| CAAGAGCATCAACCCTGATG+AGG | 0.621114 | 7.4:-54097044 | MS.gene26049:CDS |
| TTGTACTTGAGGGAAATCAT+CGG | 0.621700 | 7.4:+54097829 | None:intergenic |
| AGTACCAAGGTCTATTCCAA+TGG | 0.629054 | 7.4:+54098461 | None:intergenic |
| GAAAAGAGAACTGACTGTGA+TGG | 0.633914 | 7.4:-54097574 | MS.gene26049:CDS |
| CTATGGTACTCACAAAGATG+CGG | 0.635011 | 7.4:-54097768 | MS.gene26049:CDS |
| GGAACCCAAAAGCCCTAAGG+AGG | 0.640087 | 7.4:-54097360 | MS.gene26049:CDS |
| CTTACAATAATCAATGACAA+AGG | 0.652145 | 7.4:-54096626 | MS.gene26049:CDS |
| GTGGCCATTCAAAGTCATTG+CGG | 0.653981 | 7.4:-54097866 | MS.gene26049:CDS |
| CGTACTCTTGTGTTGCTGTG+TGG | 0.655627 | 7.4:-54098437 | MS.gene26049:CDS |
| GATCAATACTGCAATTGCCG+TGG | 0.662061 | 7.4:-54096420 | MS.gene26049:CDS |
| TCCTAGAAGATCCACCAACA+AGG | 0.665374 | 7.4:+54097119 | None:intergenic |
| TCATGACTGTGGTGATTCCG+AGG | 0.667674 | 7.4:-54096901 | MS.gene26049:CDS |
| AATGACACCAGCATCTATGG+TGG | 0.667765 | 7.4:+54097660 | None:intergenic |
| GAAAGCAACAAAGGAAGGAG+TGG | 0.667995 | 7.4:+54098362 | None:intergenic |
| GGTGGAAACACTCACCTTGG+GGG | 0.675471 | 7.4:-54097457 | MS.gene26049:CDS |
| AAAGATGCGGGAGATTGCAG+AGG | 0.680528 | 7.4:-54097755 | MS.gene26049:CDS |
| CACAAGAGTACGTAGTACCA+AGG | 0.684270 | 7.4:+54098448 | None:intergenic |
| ATGATTTCCCTCAAGTACAA+GGG | 0.686901 | 7.4:-54097826 | MS.gene26049:CDS |
| AACTTCCAACCAAGAGACAG+TGG | 0.687062 | 7.4:+54096935 | None:intergenic |
| CATCAAAAGTCCCACCACCA+AGG | 0.703356 | 7.4:+54097527 | None:intergenic |
| GCTGTGTGGCATGAAGAACA+TGG | 0.753906 | 7.4:-54098423 | MS.gene26049:CDS |
| AATACATGATGTCATGACTG+TGG | 0.754095 | 7.4:-54096912 | MS.gene26049:CDS |
| AGTGCATGGAGACTGTTGAG+AGG | 0.754321 | 7.4:-54097189 | MS.gene26049:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAAGGTTTATTATTTG+TGG | - | chr7.4:54096372-54096391 | MS.gene26049:CDS | 15.0% |
| !!! | AAAAAAATTTAGATCCATTT+TGG | - | chr7.4:54096863-54096882 | MS.gene26049:CDS | 15.0% |
| !!! | TAAAGGTATATAATTAAGAA+AGG | - | chr7.4:54096770-54096789 | MS.gene26049:CDS | 15.0% |
| !! | AAAATACATGAAGATCTATT+TGG | + | chr7.4:54096980-54096999 | None:intergenic | 20.0% |
| !! | TACAATTGATTATTGAGTAA+AGG | - | chr7.4:54096753-54096772 | MS.gene26049:CDS | 20.0% |
| !! | TTTAGTTGTTTATGACATTA+AGG | - | chr7.4:54096426-54096445 | MS.gene26049:CDS | 20.0% |
| !! | TTTGATCTATGATATAATGT+TGG | - | chr7.4:54096821-54096840 | MS.gene26049:CDS | 20.0% |
| !!! | TAGATCTTCATGTATTTTAT+TGG | - | chr7.4:54096982-54097001 | MS.gene26049:CDS | 20.0% |
| !!! | TATTTGAGACTTATAAGATT+AGG | - | chr7.4:54096931-54096950 | MS.gene26049:CDS | 20.0% |
| ! | AAAAATGTCCCAAAAAATGA+TGG | + | chr7.4:54096890-54096909 | None:intergenic | 25.0% |
| ! | AAGAAAAATTTGGACATCAT+TGG | - | chr7.4:54097607-54097626 | MS.gene26049:CDS | 25.0% |
| ! | AGAAAAATTTGGACATCATT+GGG | - | chr7.4:54097608-54097627 | MS.gene26049:CDS | 25.0% |
| ! | CTTACAATAATCAATGACAA+AGG | - | chr7.4:54098363-54098382 | MS.gene26049:CDS | 25.0% |
| ! | GATCAAAAGGAAGAAAAATT+TGG | - | chr7.4:54097597-54097616 | MS.gene26049:CDS | 25.0% |
| ! | GTCTTGATTAATGTTTATGA+GGG | - | chr7.4:54098174-54098193 | MS.gene26049:intron | 25.0% |
| ! | GTTTATTATTTGTGGTTGAA+AGG | - | chr7.4:54096380-54096399 | MS.gene26049:CDS | 25.0% |
| ! | TACAAAAAGACATAATGTTG+TGG | - | chr7.4:54097104-54097123 | MS.gene26049:CDS | 25.0% |
| ! | TCTTCTTACAATTAAGGATA+AGG | - | chr7.4:54097489-54097508 | MS.gene26049:CDS | 25.0% |
| ! | TGTCTTGATTAATGTTTATG+AGG | - | chr7.4:54098173-54098192 | MS.gene26049:intron | 25.0% |
| ! | TTGAAAGGTTTATGATTCAA+AGG | - | chr7.4:54096395-54096414 | MS.gene26049:CDS | 25.0% |
| !!! | AATATTTTTGTCTTTGACCT+TGG | - | chr7.4:54097445-54097464 | MS.gene26049:CDS | 25.0% |
| !!! | ATTTTATTGGTGACTAGATT+AGG | - | chr7.4:54096995-54097014 | MS.gene26049:CDS | 25.0% |
| !!! | ATTTTGGTCCATCATTTTTT+GGG | - | chr7.4:54096879-54096898 | MS.gene26049:CDS | 25.0% |
| AAAGTTTGAGGAGATCAATA+TGG | - | chr7.4:54097765-54097784 | MS.gene26049:CDS | 30.0% | |
| AAATGAAAGTGATGTTCTTC+AGG | - | chr7.4:54098623-54098642 | MS.gene26049:intron | 30.0% | |
| ACATCAAAGCATACATCAAA+AGG | + | chr7.4:54098282-54098301 | None:intergenic | 30.0% | |
| ATTATGGCGAAAAAAGATGA+AGG | - | chr7.4:54096500-54096519 | MS.gene26049:CDS | 30.0% | |
| ATTCACATCAAGCAAATTTG+CGG | + | chr7.4:54098595-54098614 | None:intergenic | 30.0% | |
| CAATAATCAATGACAAAGGA+AGG | - | chr7.4:54098367-54098386 | MS.gene26049:CDS | 30.0% | |
| GACATTATTCACAATGATCA+AGG | - | chr7.4:54096596-54096615 | MS.gene26049:CDS | 30.0% | |
| TCTTGCAATGAAAACGAATA+AGG | + | chr7.4:54096481-54096500 | None:intergenic | 30.0% | |
| TGCTTTGATGTCAATCAAAA+TGG | - | chr7.4:54098291-54098310 | MS.gene26049:CDS | 30.0% | |
| TGTGTCTCTTCTTACAATTA+AGG | - | chr7.4:54097483-54097502 | MS.gene26049:CDS | 30.0% | |
| ! | AATGGTGAACTATTTTGTTG+AGG | - | chr7.4:54097573-54097592 | MS.gene26049:CDS | 30.0% |
| ! | AGAGGACTTTGATAATAGAA+TGG | - | chr7.4:54097555-54097574 | MS.gene26049:CDS | 30.0% |
| ! | ATTATGTCTTTTTGTACCAC+AGG | + | chr7.4:54097100-54097119 | None:intergenic | 30.0% |
| ! | ATTTTGTTGAGGAGATCAAA+AGG | - | chr7.4:54097584-54097603 | MS.gene26049:CDS | 30.0% |
| ! | TCGTTTTCATTGCAAGATTA+TGG | - | chr7.4:54096484-54096503 | MS.gene26049:CDS | 30.0% |
| ! | TTAATTTTACAGATGCCAAG+AGG | - | chr7.4:54097050-54097069 | MS.gene26049:CDS | 30.0% |
| !! | CAAAAAATGATGGACCAAAA+TGG | + | chr7.4:54096880-54096899 | None:intergenic | 30.0% |
| !! | CATTTTGGTCCATCATTTTT+TGG | - | chr7.4:54096878-54096897 | MS.gene26049:CDS | 30.0% |
| !!! | TATTTTGACAGTTTCTGCTA+TGG | - | chr7.4:54098314-54098333 | MS.gene26049:CDS | 30.0% |
| AAGATTGATTGAAGAAGCTG+AGG | - | chr7.4:54098410-54098429 | MS.gene26049:CDS | 35.0% | |
| AATACATGATGTCATGACTG+TGG | - | chr7.4:54098077-54098096 | MS.gene26049:intron | 35.0% | |
| AATTGTTTCGTCTTCTTGAC+AGG | + | chr7.4:54098126-54098145 | None:intergenic | 35.0% | |
| ACATCAATCAACACCAAGTT+TGG | + | chr7.4:54098030-54098049 | None:intergenic | 35.0% | |
| ACCATTGCTTGAGCTTAAAA+AGG | - | chr7.4:54096358-54096377 | MS.gene26049:CDS | 35.0% | |
| AGAATTTCCCATCATCGATA+CGG | + | chr7.4:54098440-54098459 | None:intergenic | 35.0% | |
| AGTATGTATGAGCGCATTAT+AGG | - | chr7.4:54098666-54098685 | MS.gene26049:CDS | 35.0% | |
| ATGATTTCCCTCAAGTACAA+GGG | - | chr7.4:54097163-54097182 | MS.gene26049:CDS | 35.0% | |
| CAAAGCATACATCAAAAGGA+TGG | + | chr7.4:54098278-54098297 | None:intergenic | 35.0% | |
| GAGAAATGTGTTGAAGAAGA+AGG | - | chr7.4:54098509-54098528 | MS.gene26049:intron | 35.0% | |
| GGTTGAAAAACTTACTTTGC+AGG | + | chr7.4:54096341-54096360 | None:intergenic | 35.0% | |
| TCTCCATGCACTCATTAAAA+AGG | + | chr7.4:54097792-54097811 | None:intergenic | 35.0% | |
| TGAGAATCGTTGAAATAAGC+AGG | + | chr7.4:54097301-54097320 | None:intergenic | 35.0% | |
| TGATGGGAAATTCTTGAGAA+AGG | - | chr7.4:54098446-54098465 | MS.gene26049:CDS | 35.0% | |
| TTGTACTTGAGGGAAATCAT+CGG | + | chr7.4:54097163-54097182 | None:intergenic | 35.0% | |
| ! | ATTTTTGTCTTTGACCTTGG+TGG | - | chr7.4:54097448-54097467 | MS.gene26049:CDS | 35.0% |
| ! | GTGTTTTACTGATGCTAAGA+TGG | - | chr7.4:54097822-54097841 | MS.gene26049:CDS | 35.0% |
| ! | TACCAAAGACAGTGTTTTCT+GGG | + | chr7.4:54096706-54096725 | None:intergenic | 35.0% |
| ! | TTACCAAAGACAGTGTTTTC+TGG | + | chr7.4:54096707-54096726 | None:intergenic | 35.0% |
| !! | ACCTTTTTAAGCTCAAGCAA+TGG | + | chr7.4:54096362-54096381 | None:intergenic | 35.0% |
| AAAGATGAAGGATGTGCCAT+TGG | - | chr7.4:54096512-54096531 | MS.gene26049:CDS | 40.0% | |
| AACCCAGAAAACACTGTCTT+TGG | - | chr7.4:54096701-54096720 | MS.gene26049:CDS | 40.0% | |
| AATCTCTCGTGCAAAGTTTG+AGG | - | chr7.4:54097753-54097772 | MS.gene26049:CDS | 40.0% | |
| AGTACCAAGGTCTATTCCAA+TGG | + | chr7.4:54096531-54096550 | None:intergenic | 40.0% | |
| CATAAGCAATTGCCTCATCA+GGG | + | chr7.4:54097960-54097979 | None:intergenic | 40.0% | |
| CTATGGTACTCACAAAGATG+CGG | - | chr7.4:54097221-54097240 | MS.gene26049:CDS | 40.0% | |
| CTATTGCAGGACTTCTTCTA+CGG | - | chr7.4:54097910-54097929 | MS.gene26049:CDS | 40.0% | |
| GAAAAGAGAACTGACTGTGA+TGG | - | chr7.4:54097415-54097434 | MS.gene26049:CDS | 40.0% | |
| GAACTGACTGTGATGGTAAA+CGG | - | chr7.4:54097422-54097441 | MS.gene26049:CDS | 40.0% | |
| GATGATTTCCCTCAAGTACA+AGG | - | chr7.4:54097162-54097181 | MS.gene26049:CDS | 40.0% | |
| GCAAGTGACAATCATCTTCT+TGG | - | chr7.4:54098210-54098229 | MS.gene26049:intron | 40.0% | |
| GGATAAGGTCTTCGAAGTTA+AGG | - | chr7.4:54097504-54097523 | MS.gene26049:CDS | 40.0% | |
| TAAAGTGCAGCAACTATTGC+AGG | - | chr7.4:54097897-54097916 | MS.gene26049:CDS | 40.0% | |
| TACTCTCAAGCTCATTCAAG+TGG | + | chr7.4:54098650-54098669 | None:intergenic | 40.0% | |
| TAGGAAGTTTACTGATCCTG+TGG | - | chr7.4:54097081-54097100 | MS.gene26049:CDS | 40.0% | |
| TATGGTACTCACAAAGATGC+GGG | - | chr7.4:54097222-54097241 | MS.gene26049:CDS | 40.0% | |
| TATTGCAGGACTTCTTCTAC+GGG | - | chr7.4:54097911-54097930 | MS.gene26049:CDS | 40.0% | |
| TGCAATAGTTGCTGCACTTT+AGG | + | chr7.4:54097898-54097917 | None:intergenic | 40.0% | |
| TTTCGTCTTCTTGACAGGAA+TGG | + | chr7.4:54098121-54098140 | None:intergenic | 40.0% | |
| ! | AGATGATTGTCACTTGCTCT+TGG | + | chr7.4:54098207-54098226 | None:intergenic | 40.0% |
| ! | CACAGTCAGTTCTCTTTTCA+AGG | + | chr7.4:54097414-54097433 | None:intergenic | 40.0% |
| ! | CTTGGTTCTTTCACTCTTTC+TGG | - | chr7.4:54098228-54098247 | MS.gene26049:intron | 40.0% |
| ! | GGACCTTTTTAATGAGTGCA+TGG | - | chr7.4:54097786-54097805 | MS.gene26049:CDS | 40.0% |
| !! | GTTGATGATGTTGTCCTTGT+TGG | - | chr7.4:54097856-54097875 | MS.gene26049:CDS | 40.0% |
| !! | TCAACACCATTTGGTGTTTC+TGG | - | chr7.4:54096315-54096334 | MS.gene26049:CDS | 40.0% |
| !! | TGCTGGTCTCAATGTTTTGA+AGG | - | chr7.4:54097351-54097370 | MS.gene26049:CDS | 40.0% |
| AACTTCCAACCAAGAGACAG+TGG | + | chr7.4:54098057-54098076 | None:intergenic | 45.0% | |
| AATGACACCAGCATCTATGG+TGG | + | chr7.4:54097332-54097351 | None:intergenic | 45.0% | |
| ACACCCGCAATGACTTTGAA+TGG | + | chr7.4:54097130-54097149 | None:intergenic | 45.0% | |
| ACAGATGCCAAGAGGCTAAT+TGG | - | chr7.4:54097058-54097077 | MS.gene26049:CDS | 45.0% | |
| ACTGCTGCAGCTATTGCATA+TGG | - | chr7.4:54097388-54097407 | MS.gene26049:CDS | 45.0% | |
| AGAAAAGCCACCATAGATGC+TGG | - | chr7.4:54097322-54097341 | MS.gene26049:CDS | 45.0% | |
| AGCAATGACACCAGCATCTA+TGG | + | chr7.4:54097335-54097354 | None:intergenic | 45.0% | |
| ATCAAGCAAATTTGCGGCCA+CGG | + | chr7.4:54098589-54098608 | None:intergenic | 45.0% | |
| ATGCCAAGAGGCTAATTGGT+AGG | - | chr7.4:54097062-54097081 | MS.gene26049:CDS | 45.0% | |
| CACCTCGAATGTTCCAAACT+TGG | - | chr7.4:54098014-54098033 | MS.gene26049:intron | 45.0% | |
| CCATAAGCAATTGCCTCATC+AGG | + | chr7.4:54097961-54097980 | None:intergenic | 45.0% | |
| CCTGATGAGGCAATTGCTTA+TGG | - | chr7.4:54097958-54097977 | MS.gene26049:intron | 45.0% | |
| CTCTTGAGCGAAAGCAACAA+AGG | + | chr7.4:54096639-54096658 | None:intergenic | 45.0% | |
| GAAAGCAACAAAGGAAGGAG+TGG | + | chr7.4:54096630-54096649 | None:intergenic | 45.0% | |
| GATCAATACTGCAATTGCCG+TGG | - | chr7.4:54098569-54098588 | MS.gene26049:intron | 45.0% | |
| GATGATGTTGTCCTTGTTGG+TGG | - | chr7.4:54097859-54097878 | MS.gene26049:CDS | 45.0% | |
| GTGGCCATTCAAAGTCATTG+CGG | - | chr7.4:54097123-54097142 | MS.gene26049:CDS | 45.0% | |
| TATGCAATAGCTGCAGCAGT+TGG | + | chr7.4:54097388-54097407 | None:intergenic | 45.0% | |
| TCCTAGAAGATCCACCAACA+AGG | + | chr7.4:54097873-54097892 | None:intergenic | 45.0% | |
| TCTGCTATGGACAAATCCAC+TGG | - | chr7.4:54098327-54098346 | MS.gene26049:CDS | 45.0% | |
| TGAGCGAAAGCAACAAAGGA+AGG | + | chr7.4:54096635-54096654 | None:intergenic | 45.0% | |
| TGCTGAGGAAATCTCGTCTA+TGG | - | chr7.4:54097204-54097223 | MS.gene26049:CDS | 45.0% | |
| TGCTGTTGTCACCAATGTTG+AGG | - | chr7.4:54097693-54097712 | MS.gene26049:CDS | 45.0% | |
| TGGCCATTCAAAGTCATTGC+GGG | - | chr7.4:54097124-54097143 | MS.gene26049:CDS | 45.0% | |
| TTGCTTTCGCTCAAGAGGAA+CGG | - | chr7.4:54096642-54096661 | MS.gene26049:CDS | 45.0% | |
| TTTGTCTTTGACCTTGGTGG+TGG | - | chr7.4:54097451-54097470 | MS.gene26049:CDS | 45.0% | |
| ! | AGAGGCATATCTGGAATCAC+TGG | - | chr7.4:54097252-54097271 | MS.gene26049:CDS | 45.0% |
| ! | AGGCTTACCGTATCGATGAT+GGG | - | chr7.4:54098430-54098449 | MS.gene26049:CDS | 45.0% |
| ! | CACAAGAGTACGTAGTACCA+AGG | + | chr7.4:54096544-54096563 | None:intergenic | 45.0% |
| ! | CACCAAGTTTGGAACATTCG+AGG | + | chr7.4:54098019-54098038 | None:intergenic | 45.0% |
| ! | CTTCCTACCAATTAGCCTCT+TGG | + | chr7.4:54097068-54097087 | None:intergenic | 45.0% |
| ! | TCAACCTCCTTAGGGCTTTT+GGG | + | chr7.4:54097636-54097655 | None:intergenic | 45.0% |
| ! | TCCTTGTTGGTGGATCTTCT+AGG | - | chr7.4:54097869-54097888 | MS.gene26049:CDS | 45.0% |
| ! | TGTGCCATTGGAATAGACCT+TGG | - | chr7.4:54096524-54096543 | MS.gene26049:CDS | 45.0% |
| ! | TTGTCTTTGACCTTGGTGGT+GGG | - | chr7.4:54097452-54097471 | MS.gene26049:CDS | 45.0% |
| !! | ACAGGAATGGAAGTGTTCCT+CGG | + | chr7.4:54098108-54098127 | None:intergenic | 45.0% |
| !! | ATAGATGCTGGTGTCATTGC+TGG | - | chr7.4:54097334-54097353 | MS.gene26049:CDS | 45.0% |
| !! | CAAAGCATCGACCTCAACAT+TGG | + | chr7.4:54097707-54097726 | None:intergenic | 45.0% |
| !! | CTTTGTTGCTTTCGCTCAAG+AGG | - | chr7.4:54096637-54096656 | MS.gene26049:CDS | 45.0% |
| !! | GAGGTCGATGCTTTGTTTCA+GGG | - | chr7.4:54097712-54097731 | MS.gene26049:CDS | 45.0% |
| !! | TGAGGTCGATGCTTTGTTTC+AGG | - | chr7.4:54097711-54097730 | MS.gene26049:CDS | 45.0% |
| AAAGATGCGGGAGATTGCAG+AGG | - | chr7.4:54097234-54097253 | MS.gene26049:CDS | 50.0% | |
| AAGCTCGTTCTTACTGCCAG+TGG | + | chr7.4:54098346-54098365 | None:intergenic | 50.0% | |
| AAGGTGAGTGTTTCCACCAG+TGG | + | chr7.4:54097530-54097549 | None:intergenic | 50.0% | |
| ACGCAGTTCTCAACCTCCTT+AGG | + | chr7.4:54097645-54097664 | None:intergenic | 50.0% | |
| ACTGGTGGAAACACTCACCT+TGG | - | chr7.4:54097529-54097548 | MS.gene26049:CDS | 50.0% | |
| AGTGCATGGAGACTGTTGAG+AGG | - | chr7.4:54097800-54097819 | MS.gene26049:CDS | 50.0% | |
| CATCAAAAGTCCCACCACCA+AGG | + | chr7.4:54097465-54097484 | None:intergenic | 50.0% | |
| CGCAGTTCTCAACCTCCTTA+GGG | + | chr7.4:54097644-54097663 | None:intergenic | 50.0% | |
| CTCCTGTCCCTTGTACTTGA+GGG | + | chr7.4:54097173-54097192 | None:intergenic | 50.0% | |
| CTGGTGGAAACACTCACCTT+GGG | - | chr7.4:54097530-54097549 | MS.gene26049:CDS | 50.0% | |
| GATGTTGCACCACTGTCTCT+TGG | - | chr7.4:54098045-54098064 | MS.gene26049:intron | 50.0% | |
| GCTCAAGAGGAACGGTTGAT+TGG | - | chr7.4:54096650-54096669 | MS.gene26049:CDS | 50.0% | |
| GCTGTGTGGCATGAAGAACA+TGG | - | chr7.4:54096566-54096585 | MS.gene26049:CDS | 50.0% | |
| GGCTGAAGTCATGAATGCTC+TGG | - | chr7.4:54098467-54098486 | MS.gene26049:CDS | 50.0% | |
| GTCTTCGAAGTTAAGGCCAC+TGG | - | chr7.4:54097511-54097530 | MS.gene26049:CDS | 50.0% | |
| TATCAAAGTCCTCTCCCCCA+AGG | + | chr7.4:54097549-54097568 | None:intergenic | 50.0% | |
| TCATGACTGTGGTGATTCCG+AGG | - | chr7.4:54098088-54098107 | MS.gene26049:intron | 50.0% | |
| TCTCCTGTCCCTTGTACTTG+AGG | + | chr7.4:54097174-54097193 | None:intergenic | 50.0% | |
| TGCAGGCCAGAAACACCAAA+TGG | + | chr7.4:54096324-54096343 | None:intergenic | 50.0% | |
| TGGTGGAAACACTCACCTTG+GGG | - | chr7.4:54097531-54097550 | MS.gene26049:CDS | 50.0% | |
| TTCCACTCAACAAAGCAGCC+TGG | + | chr7.4:54097993-54098012 | None:intergenic | 50.0% | |
| TTCCCTCAAGTACAAGGGAC+AGG | - | chr7.4:54097168-54097187 | MS.gene26049:CDS | 50.0% | |
| TTCGAAGTTAAGGCCACTGG+TGG | - | chr7.4:54097514-54097533 | MS.gene26049:CDS | 50.0% | |
| TTGCACCACTGTCTCTTGGT+TGG | - | chr7.4:54098049-54098068 | MS.gene26049:intron | 50.0% | |
| TTGGGAACCCAAAAGCCCTA+AGG | - | chr7.4:54097626-54097645 | MS.gene26049:CDS | 50.0% | |
| ! | CGTACTCTTGTGTTGCTGTG+TGG | - | chr7.4:54096552-54096571 | MS.gene26049:CDS | 50.0% |
| ! | CTCAACCTCCTTAGGGCTTT+TGG | + | chr7.4:54097637-54097656 | None:intergenic | 50.0% |
| ! | GAGGCTTACCGTATCGATGA+TGG | - | chr7.4:54098429-54098448 | MS.gene26049:CDS | 50.0% |
| ! | GGAGAAGCTCTTTTGTGCTG+AGG | - | chr7.4:54097189-54097208 | MS.gene26049:CDS | 50.0% |
| ! | GGAGATTGCAGAGGCATATC+TGG | - | chr7.4:54097243-54097262 | MS.gene26049:CDS | 50.0% |
| !! | CAAGAGCATCAACCCTGATG+AGG | - | chr7.4:54097945-54097964 | MS.gene26049:intron | 50.0% |
| AAACACTCACCTTGGGGGAG+AGG | - | chr7.4:54097537-54097556 | MS.gene26049:CDS | 55.0% | |
| CTGCGTGCGAGAAGGCAAAA+AGG | - | chr7.4:54097659-54097678 | MS.gene26049:CDS | 55.0% | |
| GCAGGACTTCTTCTACGGGA+AGG | - | chr7.4:54097915-54097934 | MS.gene26049:CDS | 55.0% | |
| GGAACCCAAAAGCCCTAAGG+AGG | - | chr7.4:54097629-54097648 | MS.gene26049:CDS | 55.0% | |
| GGTGGAAACACTCACCTTGG+GGG | - | chr7.4:54097532-54097551 | MS.gene26049:CDS | 55.0% | |
| GTTGAGAACTGCGTGCGAGA+AGG | - | chr7.4:54097651-54097670 | MS.gene26049:CDS | 55.0% | |
| ! | GTCCAGGCTGCTTTGTTGAG+TGG | - | chr7.4:54097988-54098007 | MS.gene26049:intron | 55.0% |
| TGCTTATGGCGCAGCTGTCC+AGG | - | chr7.4:54097972-54097991 | MS.gene26049:intron | 60.0% | |
| ATGGCCACGAGCAGCTGCAG+GGG | + | chr7.4:54098259-54098278 | None:intergenic | 65.0% | |
| GATGGCCACGAGCAGCTGCA+GGG | + | chr7.4:54098260-54098279 | None:intergenic | 65.0% | |
| CACGAGCAGCTGCAGGGGGT+AGG | + | chr7.4:54098254-54098273 | None:intergenic | 70.0% | |
| CTACCCCCTGCAGCTGCTCG+TGG | - | chr7.4:54098252-54098271 | MS.gene26049:intron | 70.0% | |
| GGATGGCCACGAGCAGCTGC+AGG | + | chr7.4:54098261-54098280 | None:intergenic | 70.0% | |
| TGGCCACGAGCAGCTGCAGG+GGG | + | chr7.4:54098258-54098277 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 54096310 | 54098701 | 54096310 | ID=MS.gene26049 |
| chr7.4 | mRNA | 54096310 | 54098701 | 54096310 | ID=MS.gene26049.t1;Parent=MS.gene26049 |
| chr7.4 | exon | 54098666 | 54098701 | 54098666 | ID=MS.gene26049.t1.exon1;Parent=MS.gene26049.t1 |
| chr7.4 | CDS | 54098666 | 54098701 | 54098666 | ID=cds.MS.gene26049.t1;Parent=MS.gene26049.t1 |
| chr7.4 | exon | 54098289 | 54098511 | 54098289 | ID=MS.gene26049.t1.exon2;Parent=MS.gene26049.t1 |
| chr7.4 | CDS | 54098289 | 54098511 | 54098289 | ID=cds.MS.gene26049.t1;Parent=MS.gene26049.t1 |
| chr7.4 | exon | 54096310 | 54097949 | 54096310 | ID=MS.gene26049.t1.exon3;Parent=MS.gene26049.t1 |
| chr7.4 | CDS | 54096310 | 54097949 | 54096310 | ID=cds.MS.gene26049.t1;Parent=MS.gene26049.t1 |
| Gene Sequence |
| Protein sequence |
