Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052673.t1 | XP_003630940.1 | 100 | 320 | 0 | 0 | 1 | 320 | 1 | 320 | 2.20E-178 | 634.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052673.t1 | P70362 | 53.5 | 230 | 101 | 3 | 13 | 238 | 19 | 246 | 2.9e-62 | 240.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052673.t1 | G7LAK8 | 100.0 | 320 | 0 | 0 | 1 | 320 | 1 | 320 | 1.6e-178 | 634.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050807 | MS.gene052673 | -0.843606 | 1.26E-58 | -1.69E-46 |
| MS.gene050808 | MS.gene052673 | -0.806252 | 9.00E-50 | -1.69E-46 |
| MS.gene051719 | MS.gene052673 | -0.819047 | 1.43E-52 | -1.69E-46 |
| MS.gene051720 | MS.gene052673 | -0.807394 | 5.17E-50 | -1.69E-46 |
| MS.gene052673 | MS.gene053054 | 0.828514 | 8.62E-55 | -1.69E-46 |
| MS.gene052673 | MS.gene053221 | -0.806296 | 8.81E-50 | -1.69E-46 |
| MS.gene052673 | MS.gene054291 | 0.810876 | 9.27E-51 | -1.69E-46 |
| MS.gene052673 | MS.gene060122 | 0.809254 | 2.07E-50 | -1.69E-46 |
| MS.gene052673 | MS.gene060137 | 0.853183 | 2.83E-61 | -1.69E-46 |
| MS.gene052673 | MS.gene060634 | 0.85823 | 9.50E-63 | -1.69E-46 |
| MS.gene052673 | MS.gene062854 | -0.817929 | 2.56E-52 | -1.69E-46 |
| MS.gene052673 | MS.gene064944 | -0.800568 | 1.36E-48 | -1.69E-46 |
| MS.gene052673 | MS.gene065711 | 0.824674 | 7.10E-54 | -1.69E-46 |
| MS.gene052673 | MS.gene067312 | -0.820594 | 6.31E-53 | -1.69E-46 |
| MS.gene052673 | MS.gene067932 | -0.801344 | 9.41E-49 | -1.69E-46 |
| MS.gene052673 | MS.gene068014 | 0.839287 | 1.73E-57 | -1.69E-46 |
| MS.gene052673 | MS.gene069410 | -0.813805 | 2.13E-51 | -1.69E-46 |
| MS.gene052673 | MS.gene069868 | 0.808225 | 3.44E-50 | -1.69E-46 |
| MS.gene052673 | MS.gene069956 | -0.809687 | 1.67E-50 | -1.69E-46 |
| MS.gene052673 | MS.gene070088 | 0.817434 | 3.30E-52 | -1.69E-46 |
| MS.gene052673 | MS.gene071790 | 0.804505 | 2.09E-49 | -1.69E-46 |
| MS.gene052673 | MS.gene072300 | -0.807616 | 4.63E-50 | -1.69E-46 |
| MS.gene052673 | MS.gene072397 | 0.852303 | 5.04E-61 | -1.69E-46 |
| MS.gene052673 | MS.gene073083 | -0.807071 | 6.04E-50 | -1.69E-46 |
| MS.gene052673 | MS.gene073278 | -0.800833 | 1.20E-48 | -1.69E-46 |
| MS.gene052673 | MS.gene074111 | 0.832308 | 1.02E-55 | -1.69E-46 |
| MS.gene052673 | MS.gene074519 | -0.824102 | 9.68E-54 | -1.69E-46 |
| MS.gene052673 | MS.gene07876 | -0.806491 | 8.02E-50 | -1.69E-46 |
| MS.gene052673 | MS.gene22311 | 0.865666 | 5.00E-65 | -1.69E-46 |
| MS.gene052673 | MS.gene22769 | 0.801283 | 9.69E-49 | -1.69E-46 |
| MS.gene052673 | MS.gene22814 | 0.800803 | 1.21E-48 | -1.69E-46 |
| MS.gene052673 | MS.gene23105 | -0.840219 | 9.92E-58 | -1.69E-46 |
| MS.gene052673 | MS.gene23509 | 0.890024 | 1.43E-73 | -1.69E-46 |
| MS.gene052673 | MS.gene23697 | -0.80983 | 1.56E-50 | -1.69E-46 |
| MS.gene052673 | MS.gene24736 | -0.809887 | 1.52E-50 | -1.69E-46 |
| MS.gene052673 | MS.gene25816 | -0.820592 | 6.32E-53 | -1.69E-46 |
| MS.gene052673 | MS.gene26049 | -0.820221 | 7.69E-53 | -1.69E-46 |
| MS.gene052673 | MS.gene26246 | 0.855205 | 7.37E-62 | -1.69E-46 |
| MS.gene052673 | MS.gene27414 | -0.827503 | 1.51E-54 | -1.69E-46 |
| MS.gene052673 | MS.gene27918 | -0.800833 | 1.20E-48 | -1.69E-46 |
| MS.gene052673 | MS.gene29233 | -0.806128 | 9.56E-50 | -1.69E-46 |
| MS.gene052673 | MS.gene29807 | -0.809458 | 1.87E-50 | -1.69E-46 |
| MS.gene052673 | MS.gene29973 | 0.831759 | 1.39E-55 | -1.69E-46 |
| MS.gene052673 | MS.gene30350 | -0.8058 | 1.12E-49 | -1.69E-46 |
| MS.gene052673 | MS.gene31094 | 0.808925 | 2.44E-50 | -1.69E-46 |
| MS.gene052673 | MS.gene31347 | -0.83278 | 7.78E-56 | -1.69E-46 |
| MS.gene052673 | MS.gene31650 | -0.808156 | 3.56E-50 | -1.69E-46 |
| MS.gene052673 | MS.gene33527 | -0.807643 | 4.57E-50 | -1.69E-46 |
| MS.gene052673 | MS.gene34228 | 0.811675 | 6.22E-51 | -1.69E-46 |
| MS.gene052673 | MS.gene35437 | 0.80037 | 1.49E-48 | -1.69E-46 |
| MS.gene052673 | MS.gene35530 | -0.829694 | 4.46E-55 | -1.69E-46 |
| MS.gene052673 | MS.gene35575 | -0.809774 | 1.60E-50 | -1.69E-46 |
| MS.gene052673 | MS.gene36051 | 0.822681 | 2.08E-53 | -1.69E-46 |
| MS.gene052673 | MS.gene36899 | -0.805276 | 1.44E-49 | -1.69E-46 |
| MS.gene052673 | MS.gene37074 | 0.838504 | 2.77E-57 | -1.69E-46 |
| MS.gene052673 | MS.gene37282 | 0.875522 | 2.88E-68 | -1.69E-46 |
| MS.gene052673 | MS.gene39280 | 0.859097 | 5.23E-63 | -1.69E-46 |
| MS.gene052673 | MS.gene39376 | 0.800531 | 1.38E-48 | -1.69E-46 |
| MS.gene052673 | MS.gene40326 | -0.803198 | 3.91E-49 | -1.69E-46 |
| MS.gene052673 | MS.gene40837 | 0.846897 | 1.63E-59 | -1.69E-46 |
| MS.gene052673 | MS.gene40882 | -0.818166 | 2.26E-52 | -1.69E-46 |
| MS.gene052673 | MS.gene41103 | 0.824718 | 6.94E-54 | -1.69E-46 |
| MS.gene052673 | MS.gene42142 | -0.804845 | 1.78E-49 | -1.69E-46 |
| MS.gene052673 | MS.gene43075 | -0.825572 | 4.36E-54 | -1.69E-46 |
| MS.gene052673 | MS.gene43215 | 0.833933 | 4.01E-56 | -1.69E-46 |
| MS.gene052673 | MS.gene45128 | 0.80712 | 5.90E-50 | -1.69E-46 |
| MS.gene052673 | MS.gene45663 | 0.840431 | 8.73E-58 | -1.69E-46 |
| MS.gene052673 | MS.gene45938 | 0.825132 | 5.54E-54 | -1.69E-46 |
| MS.gene052673 | MS.gene46069 | 0.852845 | 3.53E-61 | -1.69E-46 |
| MS.gene052673 | MS.gene47374 | 0.800275 | 1.56E-48 | -1.69E-46 |
| MS.gene052673 | MS.gene47875 | -0.803924 | 2.76E-49 | -1.69E-46 |
| MS.gene052673 | MS.gene48442 | 0.833216 | 6.06E-56 | -1.69E-46 |
| MS.gene052673 | MS.gene50928 | -0.817441 | 3.29E-52 | -1.69E-46 |
| MS.gene052673 | MS.gene50949 | -0.825199 | 5.34E-54 | -1.69E-46 |
| MS.gene052673 | MS.gene51893 | 0.800154 | 1.65E-48 | -1.69E-46 |
| MS.gene052673 | MS.gene52652 | 0.816069 | 6.69E-52 | -1.69E-46 |
| MS.gene052673 | MS.gene53586 | -0.809638 | 1.71E-50 | -1.69E-46 |
| MS.gene052673 | MS.gene53875 | 0.817672 | 2.92E-52 | -1.69E-46 |
| MS.gene052673 | MS.gene54023 | 0.80403 | 2.63E-49 | -1.69E-46 |
| MS.gene052673 | MS.gene54446 | 0.830708 | 2.52E-55 | -1.69E-46 |
| MS.gene052673 | MS.gene54779 | 0.807793 | 4.25E-50 | -1.69E-46 |
| MS.gene052673 | MS.gene56478 | -0.801339 | 9.44E-49 | -1.69E-46 |
| MS.gene052673 | MS.gene56480 | -0.804284 | 2.33E-49 | -1.69E-46 |
| MS.gene052673 | MS.gene56807 | 0.823205 | 1.57E-53 | -1.69E-46 |
| MS.gene052673 | MS.gene57160 | 0.834048 | 3.75E-56 | -1.69E-46 |
| MS.gene052673 | MS.gene57162 | 0.810963 | 8.87E-51 | -1.69E-46 |
| MS.gene052673 | MS.gene57576 | -0.803946 | 2.74E-49 | -1.69E-46 |
| MS.gene052673 | MS.gene57758 | -0.809403 | 1.93E-50 | -1.69E-46 |
| MS.gene052673 | MS.gene58049 | -0.815957 | 7.08E-52 | -1.69E-46 |
| MS.gene052673 | MS.gene58147 | 0.805107 | 1.57E-49 | -1.69E-46 |
| MS.gene052673 | MS.gene58486 | 0.804563 | 2.03E-49 | -1.69E-46 |
| MS.gene052673 | MS.gene59329 | 0.821662 | 3.58E-53 | -1.69E-46 |
| MS.gene052673 | MS.gene59506 | -0.806089 | 9.74E-50 | -1.69E-46 |
| MS.gene052673 | MS.gene59540 | -0.805048 | 1.61E-49 | -1.69E-46 |
| MS.gene052673 | MS.gene61075 | 0.804347 | 2.26E-49 | -1.69E-46 |
| MS.gene052673 | MS.gene61720 | -0.807405 | 5.14E-50 | -1.69E-46 |
| MS.gene052673 | MS.gene62687 | 0.96387 | 1.29E-122 | -1.69E-46 |
| MS.gene052673 | MS.gene62887 | 0.817384 | 3.39E-52 | -1.69E-46 |
| MS.gene052673 | MS.gene64249 | -0.817487 | 3.21E-52 | -1.69E-46 |
| MS.gene052673 | MS.gene65084 | 0.814948 | 1.19E-51 | -1.69E-46 |
| MS.gene052673 | MS.gene65172 | -0.818728 | 1.69E-52 | -1.69E-46 |
| MS.gene052673 | MS.gene66082 | 0.813189 | 2.90E-51 | -1.69E-46 |
| MS.gene052673 | MS.gene66850 | 0.807739 | 4.36E-50 | -1.69E-46 |
| MS.gene052673 | MS.gene69940 | -0.825983 | 3.48E-54 | -1.69E-46 |
| MS.gene052673 | MS.gene70291 | 0.847552 | 1.08E-59 | -1.69E-46 |
| MS.gene052673 | MS.gene70825 | -0.829453 | 5.10E-55 | -1.69E-46 |
| MS.gene052673 | MS.gene72268 | -0.800973 | 1.12E-48 | -1.69E-46 |
| MS.gene052673 | MS.gene72900 | 0.826498 | 2.62E-54 | -1.69E-46 |
| MS.gene052673 | MS.gene72986 | -0.800994 | 1.11E-48 | -1.69E-46 |
| MS.gene052673 | MS.gene73038 | -0.800236 | 1.58E-48 | -1.69E-46 |
| MS.gene052673 | MS.gene73273 | -0.804918 | 1.72E-49 | -1.69E-46 |
| MS.gene052673 | MS.gene74370 | -0.818451 | 1.95E-52 | -1.69E-46 |
| MS.gene052673 | MS.gene74373 | -0.822042 | 2.93E-53 | -1.69E-46 |
| MS.gene052673 | MS.gene75316 | -0.804351 | 2.25E-49 | -1.69E-46 |
| MS.gene052673 | MS.gene75719 | -0.829455 | 5.10E-55 | -1.69E-46 |
| MS.gene052673 | MS.gene76533 | 0.806296 | 8.81E-50 | -1.69E-46 |
| MS.gene052673 | MS.gene78652 | -0.812274 | 4.60E-51 | -1.69E-46 |
| MS.gene052673 | MS.gene79960 | -0.811529 | 6.69E-51 | -1.69E-46 |
| MS.gene052673 | MS.gene81370 | -0.820643 | 6.16E-53 | -1.69E-46 |
| MS.gene052673 | MS.gene83141 | 0.820069 | 8.33E-53 | -1.69E-46 |
| MS.gene052673 | MS.gene85149 | 0.813857 | 2.07E-51 | -1.69E-46 |
| MS.gene052673 | MS.gene87358 | -0.811115 | 8.23E-51 | -1.69E-46 |
| MS.gene052673 | MS.gene88243 | -0.80132 | 9.52E-49 | -1.69E-46 |
| MS.gene052673 | MS.gene88437 | 0.831085 | 2.04E-55 | -1.69E-46 |
| MS.gene052673 | MS.gene89856 | 0.859491 | 3.99E-63 | -1.69E-46 |
| MS.gene052673 | MS.gene89985 | -0.810944 | 8.96E-51 | -1.69E-46 |
| MS.gene052673 | MS.gene90022 | -0.801041 | 1.09E-48 | -1.69E-46 |
| MS.gene052673 | MS.gene90231 | 0.855615 | 5.60E-62 | -1.69E-46 |
| MS.gene052673 | MS.gene90484 | 0.802217 | 6.23E-49 | -1.69E-46 |
| MS.gene052673 | MS.gene90646 | -0.811283 | 7.56E-51 | -1.69E-46 |
| MS.gene052673 | MS.gene92149 | 0.831881 | 1.30E-55 | -1.69E-46 |
| MS.gene052673 | MS.gene93477 | -0.802827 | 4.66E-49 | -1.69E-46 |
| MS.gene052673 | MS.gene95401 | -0.810904 | 9.14E-51 | -1.69E-46 |
| MS.gene052673 | MS.gene97026 | 0.846312 | 2.35E-59 | -1.69E-46 |
| MS.gene052673 | MS.gene98045 | 0.845541 | 3.81E-59 | -1.69E-46 |
| MS.gene052673 | MS.gene98445 | 0.805774 | 1.13E-49 | -1.69E-46 |
| MS.gene052673 | MS.gene98700 | -0.800563 | 1.36E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052673.t1 | MTR_8g105250 | 100.000 | 320 | 0 | 0 | 1 | 320 | 1 | 320 | 0.0 | 663 |
| MS.gene052673.t1 | MTR_4g064260 | 56.550 | 313 | 122 | 3 | 9 | 319 | 89 | 389 | 1.59e-121 | 354 |
| MS.gene052673.t1 | MTR_4g064330 | 55.238 | 315 | 127 | 2 | 7 | 319 | 84 | 386 | 5.88e-118 | 345 |
| MS.gene052673.t1 | MTR_4g064300 | 54.839 | 310 | 126 | 3 | 12 | 319 | 122 | 419 | 6.50e-115 | 338 |
| MS.gene052673.t1 | MTR_5g086350 | 38.122 | 181 | 85 | 4 | 32 | 189 | 90 | 266 | 1.50e-28 | 115 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052673.t1 | AT2G21270 | 76.780 | 323 | 68 | 5 | 1 | 320 | 1 | 319 | 5.98e-175 | 487 |
| MS.gene052673.t1 | AT2G21270 | 76.780 | 323 | 68 | 5 | 1 | 320 | 1 | 319 | 5.98e-175 | 487 |
| MS.gene052673.t1 | AT2G21270 | 76.780 | 323 | 68 | 5 | 1 | 320 | 1 | 319 | 5.98e-175 | 487 |
| MS.gene052673.t1 | AT2G21270 | 76.780 | 323 | 68 | 5 | 1 | 320 | 1 | 319 | 5.98e-175 | 487 |
| MS.gene052673.t1 | AT2G21270 | 76.780 | 323 | 68 | 5 | 1 | 320 | 22 | 340 | 1.81e-174 | 487 |
| MS.gene052673.t1 | AT4G38930 | 70.093 | 321 | 89 | 2 | 1 | 320 | 1 | 315 | 4.67e-165 | 462 |
| MS.gene052673.t1 | AT4G38930 | 70.093 | 321 | 89 | 2 | 1 | 320 | 1 | 315 | 4.67e-165 | 462 |
| MS.gene052673.t1 | AT4G38930 | 71.028 | 321 | 82 | 4 | 1 | 320 | 1 | 311 | 7.15e-165 | 461 |
| MS.gene052673.t1 | AT4G38930 | 71.028 | 321 | 82 | 4 | 1 | 320 | 1 | 311 | 7.15e-165 | 461 |
| MS.gene052673.t1 | AT2G29070 | 60.635 | 315 | 113 | 5 | 10 | 320 | 5 | 312 | 1.13e-135 | 387 |
| MS.gene052673.t1 | AT2G29070 | 59.582 | 287 | 105 | 5 | 38 | 320 | 1 | 280 | 1.99e-118 | 342 |
| MS.gene052673.t1 | AT2G29070 | 51.813 | 193 | 82 | 5 | 132 | 320 | 11 | 196 | 2.68e-53 | 173 |
| MS.gene052673.t1 | AT4G15420 | 40.123 | 162 | 88 | 4 | 32 | 184 | 90 | 251 | 5.40e-27 | 111 |
| MS.gene052673.t1 | AT4G15420 | 40.123 | 162 | 88 | 4 | 32 | 184 | 213 | 374 | 6.10e-27 | 111 |
Find 94 sgRNAs with CRISPR-Local
Find 385 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATCTTCTTCTTTCTCTT+TGG | 0.145615 | 4.1:+1740782 | None:intergenic |
| CTCCACCAGTTTCTTCTTCC+GGG | 0.205032 | 4.1:-1741090 | MS.gene052673:CDS |
| CGTGGAGCAACGGGCCTTTC+AGG | 0.207292 | 4.1:+1741981 | None:intergenic |
| AAGAAGTGGTATTACCTTTC+CGG | 0.212674 | 4.1:+1740937 | None:intergenic |
| CCGGGAAGAAGTATTCTTTA+AGG | 0.227291 | 4.1:-1740746 | MS.gene052673:CDS |
| CGTCTCCCAGATCCAGTAAA+TGG | 0.228162 | 4.1:+1741142 | None:intergenic |
| CCTCCACCAGTTTCTTCTTC+CGG | 0.229434 | 4.1:-1741091 | MS.gene052673:CDS |
| CCAAAGTTCAACCCATTTAC+TGG | 0.248848 | 4.1:-1741154 | MS.gene052673:CDS |
| TTATCTTCTTCTTTCTCTTT+GGG | 0.250840 | 4.1:+1740783 | None:intergenic |
| GGCAAACCATTACCAGCTTC+TGG | 0.251775 | 4.1:+1741942 | None:intergenic |
| TTCAGGTTCCTTGTAATCTA+AGG | 0.257049 | 4.1:+1741998 | None:intergenic |
| ACCAGCTTCTGGGGCCTTTC+CGG | 0.257803 | 4.1:+1741953 | None:intergenic |
| GCCTCACACAAAAGACTTCT+TGG | 0.277768 | 4.1:-1744076 | MS.gene052673:CDS |
| TTCAACCCATTTACTGGATC+TGG | 0.281619 | 4.1:-1741148 | MS.gene052673:CDS |
| GGTTTCTCATTGTGGTGTTC+TGG | 0.292912 | 4.1:-1744339 | MS.gene052673:CDS |
| CCGGTCTCTTTACCGCGGTT+TGG | 0.328464 | 4.1:+1740956 | None:intergenic |
| ACTCAGGGCAAGCTTGTGTT+TGG | 0.343149 | 4.1:-1740986 | MS.gene052673:CDS |
| GCATGATATACATGCCATAC+TGG | 0.346272 | 4.1:-1744298 | MS.gene052673:CDS |
| TTTGTCACCACTTTCAAGTT+GGG | 0.347179 | 4.1:+1744644 | None:intergenic |
| CGGGAAGAAGTATTCTTTAA+GGG | 0.362589 | 4.1:-1740745 | MS.gene052673:CDS |
| ACAAGCTTGCCCTGAGTTTG+AGG | 0.372265 | 4.1:+1740992 | None:intergenic |
| AACTTTGGTTCAGTTTCAGC+AGG | 0.376076 | 4.1:+1741169 | None:intergenic |
| AGCAGCAGGATTCTTGTCCT+TGG | 0.380093 | 4.1:+1741066 | None:intergenic |
| AACTTAACATATGTTCCCTT+TGG | 0.397023 | 4.1:+1744102 | None:intergenic |
| CCTTAAAGAATACTTCTTCC+CGG | 0.399493 | 4.1:+1740746 | None:intergenic |
| GCAAACCATTACCAGCTTCT+GGG | 0.410537 | 4.1:+1741943 | None:intergenic |
| CCGGCAGAACGTGGAGCAAC+GGG | 0.425151 | 4.1:+1741972 | None:intergenic |
| GACTACTGGAGATAGCATTA+TGG | 0.427680 | 4.1:-1742123 | MS.gene052673:CDS |
| CGCCCCACCCTTAGATTACA+AGG | 0.430494 | 4.1:-1742006 | MS.gene052673:CDS |
| CCAGTAAATGGGTTGAACTT+TGG | 0.434917 | 4.1:+1741154 | None:intergenic |
| CTTGGATATTTCCAATCCTA+AGG | 0.447761 | 4.1:-1744058 | MS.gene052673:CDS |
| CTCAGGGCAAGCTTGTGTTT+GGG | 0.462423 | 4.1:-1740985 | MS.gene052673:CDS |
| GACTCACATGGCCTTAGGAT+TGG | 0.462854 | 4.1:+1744047 | None:intergenic |
| AAGTAATGCTCCTCAAACTC+AGG | 0.463360 | 4.1:-1741002 | MS.gene052673:CDS |
| TCGTAATGCTGCTGCTGAGC+GGG | 0.469762 | 4.1:-1744360 | MS.gene052673:CDS |
| GATAAGTTTCAGCCTTTCAC+CGG | 0.469983 | 4.1:-1740765 | MS.gene052673:CDS |
| GCCGGAAAGGCCCCAGAAGC+TGG | 0.470690 | 4.1:-1741954 | MS.gene052673:intron |
| TCAGGTTCCTTGTAATCTAA+GGG | 0.472253 | 4.1:+1741999 | None:intergenic |
| ACATCGACTCACATGGCCTT+AGG | 0.479482 | 4.1:+1744042 | None:intergenic |
| CTCAATGATGCTTATAGCAT+TGG | 0.484222 | 4.1:+1742049 | None:intergenic |
| AGGATTCTTGTCCTTGGACC+CGG | 0.493138 | 4.1:+1741072 | None:intergenic |
| GTCTCCCAGATCCAGTAAAT+GGG | 0.494698 | 4.1:+1741143 | None:intergenic |
| TACTGGATCTGGGAGACGCT+TGG | 0.495783 | 4.1:-1741137 | MS.gene052673:CDS |
| TTGTCACCACTTTCAAGTTG+GGG | 0.497338 | 4.1:+1744645 | None:intergenic |
| TCTTCTTCTTTCTCTTTGGG+TGG | 0.497605 | 4.1:+1740786 | None:intergenic |
| TGCTCCACGTTCTGCCGGAA+AGG | 0.501088 | 4.1:-1741967 | MS.gene052673:CDS |
| CCCGTTGCTCCACGTTCTGC+CGG | 0.501489 | 4.1:-1741972 | MS.gene052673:CDS |
| TTGGACCCGGAAGAAGAAAC+TGG | 0.507831 | 4.1:+1741085 | None:intergenic |
| ATAACTAACCTAGACGATCA+AGG | 0.507878 | 4.1:+1744515 | None:intergenic |
| TTCGATGGATATGGATATCA+CGG | 0.509344 | 4.1:-1745036 | MS.gene052673:CDS |
| GAATACTTCTTCCCGGTGAA+AGG | 0.517126 | 4.1:+1740753 | None:intergenic |
| TCCGGCAGAACGTGGAGCAA+CGG | 0.519164 | 4.1:+1741971 | None:intergenic |
| CCTAGACGATCAAGGGCTGA+TGG | 0.520566 | 4.1:+1744523 | None:intergenic |
| TCAACCCATTTACTGGATCT+GGG | 0.520842 | 4.1:-1741147 | MS.gene052673:CDS |
| CTGGAGTTCATTGCTGAGGA+AGG | 0.523879 | 4.1:-1744320 | MS.gene052673:CDS |
| AGTTTCTTCTTCCGGGTCCA+AGG | 0.526442 | 4.1:-1741083 | MS.gene052673:CDS |
| GTTCCTTGTAATCTAAGGGT+GGG | 0.531400 | 4.1:+1742003 | None:intergenic |
| GGTTCCTTGTAATCTAAGGG+TGG | 0.531964 | 4.1:+1742002 | None:intergenic |
| CCATCAGCCCTTGATCGTCT+AGG | 0.532282 | 4.1:-1744523 | MS.gene052673:intron |
| GCTATCTCCAGTAGTCAAGC+AGG | 0.533210 | 4.1:+1742130 | None:intergenic |
| ATGATGCTTATAGCATTGGC+AGG | 0.543569 | 4.1:+1742053 | None:intergenic |
| CTGCAGCCCCAACTTGAAAG+TGG | 0.545884 | 4.1:-1744651 | MS.gene052673:intron |
| CATGATATACATGCCATACT+GGG | 0.549712 | 4.1:-1744297 | MS.gene052673:intron |
| GGGGCCTTTCCGGCAGAACG+TGG | 0.552419 | 4.1:+1741963 | None:intergenic |
| TTACGAAGTTCAAACAACAT+TGG | 0.558719 | 4.1:+1744377 | None:intergenic |
| GCTGAGCGGGTTTCTCATTG+TGG | 0.560946 | 4.1:-1744347 | MS.gene052673:CDS |
| TTCCTTGTAATCTAAGGGTG+GGG | 0.562049 | 4.1:+1742004 | None:intergenic |
| CCAAACCGCGGTAAAGAGAC+CGG | 0.562944 | 4.1:-1740956 | MS.gene052673:CDS |
| TCGATGGATATGGATATCAC+GGG | 0.569332 | 4.1:-1745035 | MS.gene052673:CDS |
| CATTGAGACCGACTGTGAAG+TGG | 0.571055 | 4.1:-1742033 | MS.gene052673:CDS |
| ACTTTGGTTCAGTTTCAGCA+GGG | 0.574254 | 4.1:+1741170 | None:intergenic |
| GGATCTGGGAGACGCTTGGA+CGG | 0.577239 | 4.1:-1741133 | MS.gene052673:CDS |
| GGGAAGAAGTATTCTTTAAG+GGG | 0.578462 | 4.1:-1740744 | MS.gene052673:CDS |
| CTTTGGTTCAGTTTCAGCAG+GGG | 0.579771 | 4.1:+1741171 | None:intergenic |
| TTCGTAATGCTGCTGCTGAG+CGG | 0.597157 | 4.1:-1744361 | MS.gene052673:CDS |
| TCTCTCTTTGTAGGCAACCG+AGG | 0.598775 | 4.1:-1740826 | MS.gene052673:intron |
| TAACTAACCTAGACGATCAA+GGG | 0.601848 | 4.1:+1744516 | None:intergenic |
| CAAACCATTACCAGCTTCTG+GGG | 0.606173 | 4.1:+1741944 | None:intergenic |
| GGTGGAGGCTGATAATTCAA+AGG | 0.609376 | 4.1:+1741106 | None:intergenic |
| ATAAGTTTCAGCCTTTCACC+GGG | 0.612687 | 4.1:-1740764 | MS.gene052673:CDS |
| GGCGAAGTCCACTTCACAGT+CGG | 0.613179 | 4.1:+1742025 | None:intergenic |
| ACTTTGTGAACTAGAAGCTG+TGG | 0.614635 | 4.1:+1741021 | None:intergenic |
| CCGGAAGAAGAAACTGGTGG+AGG | 0.618481 | 4.1:+1741091 | None:intergenic |
| TGTTCTGGAGTTCATTGCTG+AGG | 0.630474 | 4.1:-1744324 | MS.gene052673:CDS |
| TAGATTACAAGGAACCTGAA+AGG | 0.641772 | 4.1:-1741995 | MS.gene052673:CDS |
| GACCCGGAAGAAGAAACTGG+TGG | 0.649986 | 4.1:+1741088 | None:intergenic |
| TACTGGAGATAGCATTATGG+TGG | 0.650470 | 4.1:-1742120 | MS.gene052673:CDS |
| AGTAATGCTCCTCAAACTCA+GGG | 0.668072 | 4.1:-1741001 | MS.gene052673:CDS |
| TGTGAACTAGAAGCTGTGGA+AGG | 0.673745 | 4.1:+1741025 | None:intergenic |
| GCAGCTTGGAAACTACATTG+AGG | 0.674859 | 4.1:-1742160 | MS.gene052673:intron |
| AGACGATCAAGGGCTGATGG+AGG | 0.677129 | 4.1:+1744526 | None:intergenic |
| CCGCGGTAAAGAGACCGGAA+AGG | 0.690679 | 4.1:-1740951 | MS.gene052673:intron |
| CCTTTCCGGTCTCTTTACCG+CGG | 0.712916 | 4.1:+1740951 | None:intergenic |
| TTTGGGTCAAATCCAAACCG+CGG | 0.728144 | 4.1:-1740968 | MS.gene052673:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTGTTTCTTAAATAATAA+TGG | + | chr4.1:1741565-1741584 | None:intergenic | 10.0% |
| !!! | TTGACTTTTTATTTTAATTA+AGG | - | chr4.1:1744630-1744649 | MS.gene052673:intron | 10.0% |
| !! | AAAATATGAACAAATAAATG+GGG | + | chr4.1:1742792-1742811 | None:intergenic | 15.0% |
| !! | ATATTGCATAAAACATATTA+AGG | + | chr4.1:1743262-1743281 | None:intergenic | 15.0% |
| !! | ATCAATAAATCACATTAAAT+TGG | - | chr4.1:1742904-1742923 | MS.gene052673:intron | 15.0% |
| !! | CAACTAAAAATATAAAAAAG+TGG | + | chr4.1:1744613-1744632 | None:intergenic | 15.0% |
| !! | GAAAATATGAACAAATAAAT+GGG | + | chr4.1:1742793-1742812 | None:intergenic | 15.0% |
| !! | TATGTACATAATATTAGAAA+CGG | + | chr4.1:1741336-1741355 | None:intergenic | 15.0% |
| !! | TCAATAAATCACATTAAATT+GGG | - | chr4.1:1742905-1742924 | MS.gene052673:intron | 15.0% |
| !! | TGAAAATATGAACAAATAAA+TGG | + | chr4.1:1742794-1742813 | None:intergenic | 15.0% |
| !! | TGTAAGAACTATATTTAATA+TGG | - | chr4.1:1743289-1743308 | MS.gene052673:intron | 15.0% |
| !!! | AATAAATATTTTTGAGACTT+CGG | - | chr4.1:1744897-1744916 | MS.gene052673:intron | 15.0% |
| !! | ACTTAAATGTTAAAAAGAAG+TGG | + | chr4.1:1745353-1745372 | None:intergenic | 20.0% |
| !! | ATGATTCCTATAAATGTTTA+GGG | - | chr4.1:1740745-1740764 | MS.gene052673:CDS | 20.0% |
| !! | CAATAAATCACATTAAATTG+GGG | - | chr4.1:1742906-1742925 | MS.gene052673:intron | 20.0% |
| !! | CTAAATGTAAAAACTTGTAA+TGG | - | chr4.1:1740898-1740917 | MS.gene052673:intron | 20.0% |
| !! | GAATGTGAAAAATGTAATTA+TGG | - | chr4.1:1744923-1744942 | MS.gene052673:intron | 20.0% |
| !! | TAATGGAAACAAATAGTTTA+GGG | - | chr4.1:1740915-1740934 | MS.gene052673:intron | 20.0% |
| !! | TATGATTCCTATAAATGTTT+AGG | - | chr4.1:1740744-1740763 | MS.gene052673:CDS | 20.0% |
| !! | TTTGTACAAGTATTTGATAA+TGG | - | chr4.1:1740799-1740818 | MS.gene052673:CDS | 20.0% |
| !!! | ACGGCATTTTTTTTTTTTTT+TGG | + | chr4.1:1742617-1742636 | None:intergenic | 20.0% |
| !!! | AGAGATTAATTGGATATTTT+TGG | + | chr4.1:1741497-1741516 | None:intergenic | 20.0% |
| !!! | ATCCATTGAGAATATATTTT+AGG | - | chr4.1:1742672-1742691 | MS.gene052673:intron | 20.0% |
| !!! | CATTACAAGTTTTTACATTT+AGG | + | chr4.1:1740900-1740919 | None:intergenic | 20.0% |
| !!! | GTATTTTTAAATCTCAGTAA+AGG | + | chr4.1:1744970-1744989 | None:intergenic | 20.0% |
| !!! | GTTTCTTCTTATTTCTTTTA+TGG | - | chr4.1:1743982-1744001 | MS.gene052673:intron | 20.0% |
| !!! | TCTTATTTCTTTTATGGTTT+TGG | - | chr4.1:1743988-1744007 | MS.gene052673:intron | 20.0% |
| !!! | TTGTACAAGTATTTGATAAT+GGG | - | chr4.1:1740800-1740819 | MS.gene052673:CDS | 20.0% |
| ! | AAAAAATTACAAGGGGAAAT+CGG | + | chr4.1:1743880-1743899 | None:intergenic | 25.0% |
| ! | AAACTCTACATCATTATGTA+TGG | + | chr4.1:1743207-1743226 | None:intergenic | 25.0% |
| ! | AAATTCTAACTTAAGTGTGT+AGG | - | chr4.1:1742430-1742449 | MS.gene052673:intron | 25.0% |
| ! | AACAATATAGTAGAACAAAG+GGG | + | chr4.1:1744869-1744888 | None:intergenic | 25.0% |
| ! | AACTCTACATCATTATGTAT+GGG | + | chr4.1:1743206-1743225 | None:intergenic | 25.0% |
| ! | ATACATAATGATGTAGAGTT+TGG | - | chr4.1:1743206-1743225 | MS.gene052673:intron | 25.0% |
| ! | ATACTTCTGCATCATTATTT+GGG | - | chr4.1:1743787-1743806 | MS.gene052673:intron | 25.0% |
| ! | ATGGTCGATTAAAAGTTATT+GGG | + | chr4.1:1743101-1743120 | None:intergenic | 25.0% |
| ! | ATTGTTAGGAATTGTTTAAC+TGG | - | chr4.1:1742499-1742518 | MS.gene052673:intron | 25.0% |
| ! | CAACAATATAGTAGAACAAA+GGG | + | chr4.1:1744870-1744889 | None:intergenic | 25.0% |
| ! | CCAAAATGACAAAATTAAGT+TGG | + | chr4.1:1744355-1744374 | None:intergenic | 25.0% |
| ! | CTAAAAGTAAAAACTTGTGA+TGG | - | chr4.1:1741022-1741041 | MS.gene052673:CDS | 25.0% |
| ! | GCGATTAAACATAGTTATAT+TGG | - | chr4.1:1743052-1743071 | MS.gene052673:intron | 25.0% |
| ! | TAAAAATACTGCTGAGTTAA+AGG | - | chr4.1:1744981-1745000 | MS.gene052673:intron | 25.0% |
| ! | TATACTTCTGCATCATTATT+TGG | - | chr4.1:1743786-1743805 | MS.gene052673:intron | 25.0% |
| ! | TATTGGAAGCTTATTATAAG+AGG | - | chr4.1:1744446-1744465 | MS.gene052673:intron | 25.0% |
| ! | TCAAAACCCTAAACATTTAT+AGG | + | chr4.1:1740754-1740773 | None:intergenic | 25.0% |
| ! | TGCCTAAAATATATTCTCAA+TGG | + | chr4.1:1742677-1742696 | None:intergenic | 25.0% |
| ! | TTATCTTCTTCTTTCTCTTT+GGG | + | chr4.1:1745493-1745512 | None:intergenic | 25.0% |
| ! | TTGTACATGAATTCGATAAT+AGG | - | chr4.1:1740853-1740872 | MS.gene052673:intron | 25.0% |
| !! | ACACACTTAAGTTAGAATTT+TGG | + | chr4.1:1742430-1742449 | None:intergenic | 25.0% |
| !! | ACATGTCGATTATTTATTGA+GGG | - | chr4.1:1741387-1741406 | MS.gene052673:intron | 25.0% |
| !! | CACACTTAAGTTAGAATTTT+GGG | + | chr4.1:1742429-1742448 | None:intergenic | 25.0% |
| !! | GTAATGGAAACAAATAGTTT+AGG | - | chr4.1:1740914-1740933 | MS.gene052673:intron | 25.0% |
| !! | TACATGTCGATTATTTATTG+AGG | - | chr4.1:1741386-1741405 | MS.gene052673:intron | 25.0% |
| !! | TGTTCAGAAACAAAAACTTT+TGG | + | chr4.1:1742009-1742028 | None:intergenic | 25.0% |
| !! | TTGTACAAGTATTTGATAGT+AGG | - | chr4.1:1740967-1740986 | MS.gene052673:CDS | 25.0% |
| !!! | ATTTTGCCGTTTCAAAAAAA+AGG | - | chr4.1:1743950-1743969 | MS.gene052673:intron | 25.0% |
| !!! | CATCACAAGTTTTTACTTTT+AGG | + | chr4.1:1741024-1741043 | None:intergenic | 25.0% |
| !!! | CCAACTTAATTTTGTCATTT+TGG | - | chr4.1:1744352-1744371 | MS.gene052673:CDS | 25.0% |
| !!! | TAGTATTTTAGTTGTTCTGT+TGG | - | chr4.1:1744755-1744774 | MS.gene052673:intron | 25.0% |
| !!! | TTTTGCCGTTTCAAAAAAAA+GGG | - | chr4.1:1743951-1743970 | MS.gene052673:intron | 25.0% |
| AAAAATGTGACACTTCCAAA+GGG | - | chr4.1:1742156-1742175 | MS.gene052673:CDS | 30.0% | |
| AAACCAATATGAGGAGTTAA+AGG | + | chr4.1:1744813-1744832 | None:intergenic | 30.0% | |
| AACCAAGCCTATTGTAAATA+AGG | + | chr4.1:1742706-1742725 | None:intergenic | 30.0% | |
| AACTTAACATATGTTCCCTT+TGG | + | chr4.1:1742174-1742193 | None:intergenic | 30.0% | |
| AAGTAGCATGATGTTTATGT+TGG | - | chr4.1:1744668-1744687 | MS.gene052673:intron | 30.0% | |
| ACATTCACGGTTAAATCAAA+TGG | + | chr4.1:1743030-1743049 | None:intergenic | 30.0% | |
| AGCCTATTGTAAATAAGGTA+AGG | + | chr4.1:1742701-1742720 | None:intergenic | 30.0% | |
| ATGGATTCTTATACAGATGA+TGG | - | chr4.1:1742095-1742114 | MS.gene052673:CDS | 30.0% | |
| CAATTAACGTCAAAACTCAA+AGG | + | chr4.1:1742064-1742083 | None:intergenic | 30.0% | |
| CTAAGGTTTAAACCAATATG+AGG | + | chr4.1:1744822-1744841 | None:intergenic | 30.0% | |
| CTTATCTTCTTCTTTCTCTT+TGG | + | chr4.1:1745494-1745513 | None:intergenic | 30.0% | |
| GATGGTCGATTAAAAGTTAT+TGG | + | chr4.1:1743102-1743121 | None:intergenic | 30.0% | |
| GCAACAATATAGTAGAACAA+AGG | + | chr4.1:1744871-1744890 | None:intergenic | 30.0% | |
| GTTAAGTACGAGAGATTAAT+TGG | + | chr4.1:1741507-1741526 | None:intergenic | 30.0% | |
| GTTAATTGAAATGCTCTTCA+TGG | - | chr4.1:1742076-1742095 | MS.gene052673:CDS | 30.0% | |
| TAAATAAGACGCATATTCAC+CGG | + | chr4.1:1741821-1741840 | None:intergenic | 30.0% | |
| TACTTCTGCATCATTATTTG+GGG | - | chr4.1:1743788-1743807 | MS.gene052673:intron | 30.0% | |
| TGATCTAGTGATTGATATTG+TGG | - | chr4.1:1742393-1742412 | MS.gene052673:intron | 30.0% | |
| TTAAGTAAGAGCTGGTAATA+TGG | - | chr4.1:1744696-1744715 | MS.gene052673:intron | 30.0% | |
| TTACGAAGTTCAAACAACAT+TGG | + | chr4.1:1741899-1741918 | None:intergenic | 30.0% | |
| TTCAAAAAACTCGAAAAGCA+TGG | + | chr4.1:1741670-1741689 | None:intergenic | 30.0% | |
| ! | AAATAACCAAAAGTACATGC+TGG | + | chr4.1:1742472-1742491 | None:intergenic | 30.0% |
| ! | ACATCATGCTACTTAAAGAT+TGG | + | chr4.1:1744662-1744681 | None:intergenic | 30.0% |
| ! | AGCCTTACCTTATTTACAAT+AGG | - | chr4.1:1742696-1742715 | MS.gene052673:intron | 30.0% |
| ! | CAACATTTTTCACATTAGAC+AGG | + | chr4.1:1741711-1741730 | None:intergenic | 30.0% |
| ! | CCATGTCGATTATTTATTGA+GGG | - | chr4.1:1741417-1741436 | MS.gene052673:intron | 30.0% |
| ! | GGTTTATATATTTCTGTGTG+TGG | - | chr4.1:1742967-1742986 | MS.gene052673:intron | 30.0% |
| ! | GTTATTTCGTAGGAATTGTT+AGG | - | chr4.1:1742485-1742504 | MS.gene052673:intron | 30.0% |
| ! | TACCTTATTTACAATAGGCT+TGG | - | chr4.1:1742701-1742720 | MS.gene052673:intron | 30.0% |
| ! | TCCATGTCGATTATTTATTG+AGG | - | chr4.1:1741416-1741435 | MS.gene052673:intron | 30.0% |
| ! | TGTATTTTGCATTCTTTTCC+CGG | - | chr4.1:1741799-1741818 | MS.gene052673:intron | 30.0% |
| !! | AGCTTGATTTGTTATCACAT+TGG | - | chr4.1:1742946-1742965 | MS.gene052673:intron | 30.0% |
| !! | GTGAATATGCGTCTTATTTA+TGG | - | chr4.1:1741821-1741840 | MS.gene052673:intron | 30.0% |
| !! | TGTACTTTTGGTTATTTCGT+AGG | - | chr4.1:1742475-1742494 | MS.gene052673:intron | 30.0% |
| !! | TTAGAATTTTGGGTGAAAGT+GGG | + | chr4.1:1742419-1742438 | None:intergenic | 30.0% |
| !!! | AATATTTTTGAGACTTCGGT+CGG | - | chr4.1:1744901-1744920 | MS.gene052673:intron | 30.0% |
| !!! | ATCCTTTTTTGTGTATGTGT+GGG | - | chr4.1:1744497-1744516 | MS.gene052673:intron | 30.0% |
| !!! | TCTTTTTGGGTGGTTTTTAA+GGG | - | chr4.1:1743823-1743842 | MS.gene052673:intron | 30.0% |
| !!! | TGCTTCCCTTTTTTTTGAAA+CGG | + | chr4.1:1743959-1743978 | None:intergenic | 30.0% |
| !!! | TGGTTTTTTTAAGTAAGAGC+TGG | - | chr4.1:1744688-1744707 | MS.gene052673:intron | 30.0% |
| !!! | TTCTTTTTGGGTGGTTTTTA+AGG | - | chr4.1:1743822-1743841 | MS.gene052673:intron | 30.0% |
| AAATAAGACGCATATTCACC+GGG | + | chr4.1:1741820-1741839 | None:intergenic | 35.0% | |
| AACCCACACATACACAAAAA+AGG | + | chr4.1:1744502-1744521 | None:intergenic | 35.0% | |
| AAGAAGTGGTATTACCTTTC+CGG | + | chr4.1:1745339-1745358 | None:intergenic | 35.0% | |
| AATTTACGCGTAGAAATGAG+CGG | + | chr4.1:1741101-1741120 | None:intergenic | 35.0% | |
| ACTTATGAATACCTCTTGCA+AGG | - | chr4.1:1742292-1742311 | MS.gene052673:intron | 35.0% | |
| ATAACTAACCTAGACGATCA+AGG | + | chr4.1:1741761-1741780 | None:intergenic | 35.0% | |
| ATATAGTAGAACAAAGGGGT+TGG | + | chr4.1:1744865-1744884 | None:intergenic | 35.0% | |
| ATGTATGTGTACTTAGCCTA+CGG | - | chr4.1:1743123-1743142 | MS.gene052673:intron | 35.0% | |
| ATTTACTTGCAAACACTGAC+TGG | - | chr4.1:1744050-1744069 | MS.gene052673:intron | 35.0% | |
| CACTGAAAGACAATGTGAAT+TGG | + | chr4.1:1742348-1742367 | None:intergenic | 35.0% | |
| CATGATATACATGCCATACT+GGG | - | chr4.1:1741976-1741995 | MS.gene052673:CDS | 35.0% | |
| CATGCTGCTATAATTGGTAT+TGG | - | chr4.1:1744429-1744448 | MS.gene052673:intron | 35.0% | |
| CCCTCAATAAATAATCGACA+TGG | + | chr4.1:1741390-1741409 | None:intergenic | 35.0% | |
| CCTTAAAGAATACTTCTTCC+CGG | + | chr4.1:1745530-1745549 | None:intergenic | 35.0% | |
| CTATGTATAACGTAGTGAGA+TGG | + | chr4.1:1743180-1743199 | None:intergenic | 35.0% | |
| CTCAATGATGCTTATAGCAT+TGG | + | chr4.1:1744227-1744246 | None:intergenic | 35.0% | |
| CTTGGATATTTCCAATCCTA+AGG | - | chr4.1:1742215-1742234 | MS.gene052673:intron | 35.0% | |
| GAAAAATGTGACACTTCCAA+AGG | - | chr4.1:1742155-1742174 | MS.gene052673:CDS | 35.0% | |
| GGGTGGGAAAAAAATTACAA+GGG | + | chr4.1:1743888-1743907 | None:intergenic | 35.0% | |
| GGTGGGAAAAAAATTACAAG+GGG | + | chr4.1:1743887-1743906 | None:intergenic | 35.0% | |
| GTCGATTAAAAGTTATTGGG+TGG | + | chr4.1:1743098-1743117 | None:intergenic | 35.0% | |
| GTTCTTCTTCATCTCTCTAA+GGG | - | chr4.1:1743443-1743462 | MS.gene052673:intron | 35.0% | |
| TAAATCAAACCATTGTGCCA+AGG | - | chr4.1:1742764-1742783 | MS.gene052673:intron | 35.0% | |
| TAACTAACCTAGACGATCAA+GGG | + | chr4.1:1741760-1741779 | None:intergenic | 35.0% | |
| TACACCAGTATACTAGTGTT+TGG | + | chr4.1:1742574-1742593 | None:intergenic | 35.0% | |
| TAGATTACAAGGAACCTGAA+AGG | - | chr4.1:1744278-1744297 | MS.gene052673:intron | 35.0% | |
| TATAGTAGAACAAAGGGGTT+GGG | + | chr4.1:1744864-1744883 | None:intergenic | 35.0% | |
| TCACATTAAATTGGGGAATG+TGG | - | chr4.1:1742913-1742932 | MS.gene052673:intron | 35.0% | |
| TCAGGTTCCTTGTAATCTAA+GGG | + | chr4.1:1744277-1744296 | None:intergenic | 35.0% | |
| TGGTGCGAGAAGAAATAATT+CGG | + | chr4.1:1741060-1741079 | None:intergenic | 35.0% | |
| TGGTTAATTTAATGAGCGAG+AGG | + | chr4.1:1743160-1743179 | None:intergenic | 35.0% | |
| TGTTTAATCGCGAACATTCA+CGG | + | chr4.1:1743043-1743062 | None:intergenic | 35.0% | |
| TTAAATTGGGGAATGTGGTT+TGG | - | chr4.1:1742918-1742937 | MS.gene052673:intron | 35.0% | |
| TTCGATGGATATGGATATCA+CGG | - | chr4.1:1741237-1741256 | MS.gene052673:intron | 35.0% | |
| TTCTTCAGAGATGAGAGAAA+TGG | + | chr4.1:1742845-1742864 | None:intergenic | 35.0% | |
| TTGCCTACAAAGAGAGAAAA+TGG | + | chr4.1:1745444-1745463 | None:intergenic | 35.0% | |
| TTGGGGAAGCTTATTATAAG+AGG | - | chr4.1:1744536-1744555 | MS.gene052673:CDS | 35.0% | |
| ! | AATTTTTCCTGCTTGACTAC+TGG | - | chr4.1:1744136-1744155 | MS.gene052673:CDS | 35.0% |
| ! | ACCTTTTCGATAAAAGAAGC+AGG | + | chr4.1:1741294-1741313 | None:intergenic | 35.0% |
| ! | ATCTCTGAAGAACATTCACA+TGG | - | chr4.1:1742853-1742872 | MS.gene052673:intron | 35.0% |
| ! | ATTATTTCTTCTCGCACCAT+CGG | - | chr4.1:1741061-1741080 | MS.gene052673:CDS | 35.0% |
| ! | CCTTTTCGATAAAAGAAGCA+GGG | + | chr4.1:1741293-1741312 | None:intergenic | 35.0% |
| ! | GAGAACATGCTTTTACAAGA+GGG | - | chr4.1:1742117-1742136 | MS.gene052673:CDS | 35.0% |
| ! | GTAAGCTTGTTTCACGAATA+TGG | - | chr4.1:1742034-1742053 | MS.gene052673:CDS | 35.0% |
| ! | TCTCCATTTTCTCTCTTTGT+AGG | - | chr4.1:1745438-1745457 | MS.gene052673:intron | 35.0% |
| ! | TTCAGGTTCCTTGTAATCTA+AGG | + | chr4.1:1744278-1744297 | None:intergenic | 35.0% |
| ! | TTGTAACCAGCATGTACTTT+TGG | - | chr4.1:1742463-1742482 | MS.gene052673:intron | 35.0% |
| !! | ACACAGTTTTTCGATGGATA+TGG | - | chr4.1:1741228-1741247 | MS.gene052673:intron | 35.0% |
| !! | CGGGAAGAAGTATTCTTTAA+GGG | - | chr4.1:1745528-1745547 | MS.gene052673:intron | 35.0% |
| !! | GCAAGAGGTATTCATAAGTT+GGG | + | chr4.1:1742291-1742310 | None:intergenic | 35.0% |
| !! | GGGAAGAAGTATTCTTTAAG+GGG | - | chr4.1:1745529-1745548 | MS.gene052673:intron | 35.0% |
| !! | GTTAGAATTTTGGGTGAAAG+TGG | + | chr4.1:1742420-1742439 | None:intergenic | 35.0% |
| !! | TAACATAACATCGACTCACA+TGG | + | chr4.1:1742241-1742260 | None:intergenic | 35.0% |
| !! | TGCAAGAGGTATTCATAAGT+TGG | + | chr4.1:1742292-1742311 | None:intergenic | 35.0% |
| !! | TTTGTCACCACTTTCAAGTT+GGG | + | chr4.1:1741632-1741651 | None:intergenic | 35.0% |
| !! | TTTTGTCACCACTTTCAAGT+TGG | + | chr4.1:1741633-1741652 | None:intergenic | 35.0% |
| !!! | CATCCTTTTTTGTGTATGTG+TGG | - | chr4.1:1744496-1744515 | MS.gene052673:intron | 35.0% |
| !!! | CTTTTTGGGTGGTTTTTAAG+GGG | - | chr4.1:1743824-1743843 | MS.gene052673:intron | 35.0% |
| !!! | GTGTCGGTTTTGTTCTTTTT+GGG | - | chr4.1:1743810-1743829 | MS.gene052673:intron | 35.0% |
| !!! | TGGGAGTTGTTTTTCTATAC+TGG | - | chr4.1:1743712-1743731 | MS.gene052673:intron | 35.0% |
| AACAAATAAATGGGGAGCCT+TGG | + | chr4.1:1742784-1742803 | None:intergenic | 40.0% | |
| AAGTAATGCTCCTCAAACTC+AGG | - | chr4.1:1745271-1745290 | MS.gene052673:intron | 40.0% | |
| ACTTTGTGAACTAGAAGCTG+TGG | + | chr4.1:1745255-1745274 | None:intergenic | 40.0% | |
| AGAGGTTGAATTCATGTCGT+TGG | - | chr4.1:1744464-1744483 | MS.gene052673:intron | 40.0% | |
| AGTAATGCTCCTCAAACTCA+GGG | - | chr4.1:1745272-1745291 | MS.gene052673:intron | 40.0% | |
| AGTATACTAGTGTTTGGCTG+GGG | + | chr4.1:1742568-1742587 | None:intergenic | 40.0% | |
| ATAAGTTTCAGCCTTTCACC+GGG | - | chr4.1:1745509-1745528 | MS.gene052673:intron | 40.0% | |
| ATAGTAGAACAAAGGGGTTG+GGG | + | chr4.1:1744863-1744882 | None:intergenic | 40.0% | |
| ATTACCACTGAAAGGAGGAT+AGG | + | chr4.1:1745402-1745421 | None:intergenic | 40.0% | |
| ATTGTCTCCTTTACCAGAGT+TGG | - | chr4.1:1744779-1744798 | MS.gene052673:intron | 40.0% | |
| CAACATGACATCAAACAGCA+TGG | + | chr4.1:1742375-1742394 | None:intergenic | 40.0% | |
| CAGTATACTAGTGTTTGGCT+GGG | + | chr4.1:1742569-1742588 | None:intergenic | 40.0% | |
| CATCAATTACCACTGAAAGG+AGG | + | chr4.1:1745407-1745426 | None:intergenic | 40.0% | |
| CCAAAGTTCAACCCATTTAC+TGG | - | chr4.1:1745119-1745138 | MS.gene052673:intron | 40.0% | |
| CGGGTGGGAAAAAAATTACA+AGG | + | chr4.1:1743889-1743908 | None:intergenic | 40.0% | |
| CTATGAATTCCTGTCCACTA+TGG | - | chr4.1:1743337-1743356 | MS.gene052673:intron | 40.0% | |
| CTCCTTTCAGTGGTAATTGA+TGG | - | chr4.1:1745405-1745424 | MS.gene052673:intron | 40.0% | |
| CTTGTCTCTATTGTTGGGAT+GGG | - | chr4.1:1744378-1744397 | MS.gene052673:CDS | 40.0% | |
| GACATTATCAAGTGAGTGTC+AGG | - | chr4.1:1742991-1743010 | MS.gene052673:intron | 40.0% | |
| GACTACTGGAGATAGCATTA+TGG | - | chr4.1:1744150-1744169 | MS.gene052673:CDS | 40.0% | |
| GAGGTTGAATTCATGTCGTT+GGG | - | chr4.1:1744465-1744484 | MS.gene052673:intron | 40.0% | |
| GATAAGTTTCAGCCTTTCAC+CGG | - | chr4.1:1745508-1745527 | MS.gene052673:intron | 40.0% | |
| GCAACACACATACACACATA+AGG | + | chr4.1:1744410-1744429 | None:intergenic | 40.0% | |
| GCATGATATACATGCCATAC+TGG | - | chr4.1:1741975-1741994 | MS.gene052673:CDS | 40.0% | |
| GCTAAGTACACATACATGGA+TGG | + | chr4.1:1743120-1743139 | None:intergenic | 40.0% | |
| GGAAACAAAACTAATGCCGA+TGG | + | chr4.1:1741080-1741099 | None:intergenic | 40.0% | |
| GGTCCTTTAACTCCTCATAT+TGG | - | chr4.1:1744807-1744826 | MS.gene052673:intron | 40.0% | |
| GGTCTCTTGTCTCTATTGTT+GGG | - | chr4.1:1744373-1744392 | MS.gene052673:CDS | 40.0% | |
| GGTGCGAGAAGAAATAATTC+GGG | + | chr4.1:1741059-1741078 | None:intergenic | 40.0% | |
| GGTTCTTCTTCATCTCTCTA+AGG | - | chr4.1:1743442-1743461 | MS.gene052673:intron | 40.0% | |
| GGTTGCATGCTGCTATAATT+GGG | - | chr4.1:1744518-1744537 | MS.gene052673:intron | 40.0% | |
| GTAGGCTAAGTACACATACA+TGG | + | chr4.1:1743124-1743143 | None:intergenic | 40.0% | |
| GTCCATCAATTACCACTGAA+AGG | + | chr4.1:1745410-1745429 | None:intergenic | 40.0% | |
| GTGTTGCATGCTGCTATAAT+TGG | - | chr4.1:1744423-1744442 | MS.gene052673:intron | 40.0% | |
| GTTCCTTGTAATCTAAGGGT+GGG | + | chr4.1:1744273-1744292 | None:intergenic | 40.0% | |
| GTTGCATGCTGCTATAATTG+GGG | - | chr4.1:1744425-1744444 | MS.gene052673:intron | 40.0% | |
| TACTGGAGATAGCATTATGG+TGG | - | chr4.1:1744153-1744172 | MS.gene052673:CDS | 40.0% | |
| TAGACAGGAACACATAGAAC+AGG | + | chr4.1:1741696-1741715 | None:intergenic | 40.0% | |
| TATGGATTCAGGGAAGCAAT+TGG | - | chr4.1:1743355-1743374 | MS.gene052673:intron | 40.0% | |
| TCAACCCATTTACTGGATCT+GGG | - | chr4.1:1745126-1745145 | MS.gene052673:intron | 40.0% | |
| TCGATGGATATGGATATCAC+GGG | - | chr4.1:1741238-1741257 | MS.gene052673:intron | 40.0% | |
| TCTTCTTCTTTCTCTTTGGG+TGG | + | chr4.1:1745490-1745509 | None:intergenic | 40.0% | |
| TCTTGTCTCTATTGTTGGGA+TGG | - | chr4.1:1744377-1744396 | MS.gene052673:CDS | 40.0% | |
| TGGTCTCTTGTCTCTATTGT+TGG | - | chr4.1:1744372-1744391 | MS.gene052673:CDS | 40.0% | |
| TGTGTCAAGCATACAGTAAG+CGG | + | chr4.1:1741213-1741232 | None:intergenic | 40.0% | |
| TTACCACTGAAAGGAGGATA+GGG | + | chr4.1:1745401-1745420 | None:intergenic | 40.0% | |
| TTCAACCCATTTACTGGATC+TGG | - | chr4.1:1745125-1745144 | MS.gene052673:intron | 40.0% | |
| TTCCTTGTAATCTAAGGGTG+GGG | + | chr4.1:1744272-1744291 | None:intergenic | 40.0% | |
| TTGAATTCATGTCGTTGGGA+TGG | - | chr4.1:1744469-1744488 | MS.gene052673:intron | 40.0% | |
| TTTACCACTGCATGACTAGA+AGG | + | chr4.1:1742748-1742767 | None:intergenic | 40.0% | |
| ! | AAAAGGTTAGCGTGCTTTTC+AGG | - | chr4.1:1741307-1741326 | MS.gene052673:intron | 40.0% |
| ! | AACTTTGGTTCAGTTTCAGC+AGG | + | chr4.1:1745107-1745126 | None:intergenic | 40.0% |
| ! | ACTTTGGTTCAGTTTCAGCA+GGG | + | chr4.1:1745106-1745125 | None:intergenic | 40.0% |
| ! | AGCTCAACTTGTTTGAGCTA+AGG | + | chr4.1:1744839-1744858 | None:intergenic | 40.0% |
| ! | CAGAAGTATACAAGCAACAG+CGG | + | chr4.1:1743776-1743795 | None:intergenic | 40.0% |
| ! | CCCTGCTTCTTTTATCGAAA+AGG | - | chr4.1:1741290-1741309 | MS.gene052673:intron | 40.0% |
| ! | CTTCTGTGCTTTGTGCTTTT+GGG | - | chr4.1:1743491-1743510 | MS.gene052673:intron | 40.0% |
| ! | GAATTGACATTTTGAGCAGC+AGG | + | chr4.1:1745224-1745243 | None:intergenic | 40.0% |
| ! | GGAGAACATGCTTTTACAAG+AGG | - | chr4.1:1742116-1742135 | MS.gene052673:CDS | 40.0% |
| ! | TCCAAGAAGTCTTTTGTGTG+AGG | + | chr4.1:1742201-1742220 | None:intergenic | 40.0% |
| ! | TCCATGTCGATTGTTCATGA+GGG | - | chr4.1:1741446-1741465 | MS.gene052673:intron | 40.0% |
| ! | TGCATCATTATTTGGGGTGT+CGG | - | chr4.1:1743794-1743813 | MS.gene052673:intron | 40.0% |
| ! | TTCCATGTCGATTGTTCATG+AGG | - | chr4.1:1741445-1741464 | MS.gene052673:intron | 40.0% |
| ! | TTCTGTGCTTTGTGCTTTTG+GGG | - | chr4.1:1743492-1743511 | MS.gene052673:intron | 40.0% |
| ! | TTTTGGATGCATACCCAGTA+TGG | + | chr4.1:1741992-1742011 | None:intergenic | 40.0% |
| !! | ATGATGCTTATAGCATTGGC+AGG | + | chr4.1:1744223-1744242 | None:intergenic | 40.0% |
| !! | CCAGTAAATGGGTTGAACTT+TGG | + | chr4.1:1745122-1745141 | None:intergenic | 40.0% |
| !! | CCGGGAAGAAGTATTCTTTA+AGG | - | chr4.1:1745527-1745546 | MS.gene052673:intron | 40.0% |
| !! | GCAGTTCTTTGTGGTTTGTT+GGG | - | chr4.1:1743693-1743712 | MS.gene052673:intron | 40.0% |
| !! | TGCTTGACACAGTTTTTCGA+TGG | - | chr4.1:1741222-1741241 | MS.gene052673:intron | 40.0% |
| !! | TTATGAGGGTAGTTGATGGT+AGG | - | chr4.1:1743607-1743626 | MS.gene052673:intron | 40.0% |
| !! | TTGTCACCACTTTCAAGTTG+GGG | + | chr4.1:1741631-1741650 | None:intergenic | 40.0% |
| !!! | CTATACTGGTTTTGCTGCAT+GGG | - | chr4.1:1743726-1743745 | MS.gene052673:intron | 40.0% |
| !!! | GGTGTCGGTTTTGTTCTTTT+TGG | - | chr4.1:1743809-1743828 | MS.gene052673:intron | 40.0% |
| !!! | TCGGTTTTGTTCTTTTTGGG+TGG | - | chr4.1:1743813-1743832 | MS.gene052673:intron | 40.0% |
| !!! | TCTATACTGGTTTTGCTGCA+TGG | - | chr4.1:1743725-1743744 | MS.gene052673:intron | 40.0% |
| AAGCACAAAGCACAGAAGGA+CGG | + | chr4.1:1743489-1743508 | None:intergenic | 45.0% | |
| ACCAAACTCTTGCCATGGAA+GGG | - | chr4.1:1742645-1742664 | MS.gene052673:intron | 45.0% | |
| ACCCTCATGAACAATCGACA+TGG | + | chr4.1:1741450-1741469 | None:intergenic | 45.0% | |
| AGAGGAGTAAACATAGCCGT+AGG | + | chr4.1:1743142-1743161 | None:intergenic | 45.0% | |
| ATCGGTTGCCACAAAGGAAT+CGG | + | chr4.1:1743862-1743881 | None:intergenic | 45.0% | |
| ATGCTACCAAACTCTTGCCA+TGG | - | chr4.1:1742640-1742659 | MS.gene052673:intron | 45.0% | |
| ATTCAGGGAAGCAATTGGTG+CGG | - | chr4.1:1743360-1743379 | MS.gene052673:intron | 45.0% | |
| CAAACCATTACCAGCTTCTG+GGG | + | chr4.1:1744332-1744351 | None:intergenic | 45.0% | |
| CAGGGGCTTCTTTATCTGTA+AGG | + | chr4.1:1745088-1745107 | None:intergenic | 45.0% | |
| CCAAGCTGCATGAGAAAACA+TGG | + | chr4.1:1744102-1744121 | None:intergenic | 45.0% | |
| CCAGCCAAACACTAGTATAC+TGG | - | chr4.1:1742567-1742586 | MS.gene052673:intron | 45.0% | |
| CCAGTATACTAGTGTTTGGC+TGG | + | chr4.1:1742570-1742589 | None:intergenic | 45.0% | |
| GAATACTTCTTCCCGGTGAA+AGG | + | chr4.1:1745523-1745542 | None:intergenic | 45.0% | |
| GCAAACCATTACCAGCTTCT+GGG | + | chr4.1:1744333-1744352 | None:intergenic | 45.0% | |
| GCAGCTTGGAAACTACATTG+AGG | - | chr4.1:1744113-1744132 | MS.gene052673:CDS | 45.0% | |
| GCCTCACACAAAAGACTTCT+TGG | - | chr4.1:1742197-1742216 | MS.gene052673:intron | 45.0% | |
| GGGTTGCATGCTGCTATAAT+TGG | - | chr4.1:1744517-1744536 | MS.gene052673:intron | 45.0% | |
| GGTGGAGGCTGATAATTCAA+AGG | + | chr4.1:1745170-1745189 | None:intergenic | 45.0% | |
| GGTTCCTTGTAATCTAAGGG+TGG | + | chr4.1:1744274-1744293 | None:intergenic | 45.0% | |
| GGTTTCTCATTGTGGTGTTC+TGG | - | chr4.1:1741934-1741953 | MS.gene052673:intron | 45.0% | |
| GTATACTAGTGTTTGGCTGG+GGG | + | chr4.1:1742567-1742586 | None:intergenic | 45.0% | |
| GTCTCCCAGATCCAGTAAAT+GGG | + | chr4.1:1745133-1745152 | None:intergenic | 45.0% | |
| TACCAAACTCTTGCCATGGA+AGG | - | chr4.1:1742644-1742663 | MS.gene052673:intron | 45.0% | |
| TCAGAGATGAGAGAAATGGC+AGG | + | chr4.1:1742841-1742860 | None:intergenic | 45.0% | |
| TCCTGTCCACTATGGATTCA+GGG | - | chr4.1:1743345-1743364 | MS.gene052673:intron | 45.0% | |
| TCGGTTATGAGGGTAGTTGA+TGG | - | chr4.1:1743603-1743622 | MS.gene052673:intron | 45.0% | |
| TGTGAACTAGAAGCTGTGGA+AGG | + | chr4.1:1745251-1745270 | None:intergenic | 45.0% | |
| TTACCCTATCCTCCTTTCAG+TGG | - | chr4.1:1745395-1745414 | MS.gene052673:intron | 45.0% | |
| TTCCTGTCCACTATGGATTC+AGG | - | chr4.1:1743344-1743363 | MS.gene052673:intron | 45.0% | |
| TTGCTTCCCTGAATCCATAG+TGG | + | chr4.1:1743354-1743373 | None:intergenic | 45.0% | |
| TTTGGGTCAAATCCAAACCG+CGG | - | chr4.1:1745305-1745324 | MS.gene052673:intron | 45.0% | |
| ! | AAGAGTTTGGTAGCATCGGA+CGG | + | chr4.1:1742636-1742655 | None:intergenic | 45.0% |
| ! | CCAAAAGCACAAAGCACAGA+AGG | + | chr4.1:1743493-1743512 | None:intergenic | 45.0% |
| ! | CCATGTTTTCTCATGCAGCT+TGG | - | chr4.1:1744099-1744118 | MS.gene052673:CDS | 45.0% |
| ! | CCTTCTGTGCTTTGTGCTTT+TGG | - | chr4.1:1743490-1743509 | MS.gene052673:intron | 45.0% |
| ! | CTTTGGTTCAGTTTCAGCAG+GGG | + | chr4.1:1745105-1745124 | None:intergenic | 45.0% |
| ! | GGCAGTTCTTTGTGGTTTGT+TGG | - | chr4.1:1743692-1743711 | MS.gene052673:intron | 45.0% |
| ! | TCTGTGCTTTGTGCTTTTGG+GGG | - | chr4.1:1743493-1743512 | MS.gene052673:intron | 45.0% |
| ! | TGGCAAGAGTTTGGTAGCAT+CGG | + | chr4.1:1742640-1742659 | None:intergenic | 45.0% |
| ! | TTGCAAACACTGACTGGAGT+TGG | - | chr4.1:1744056-1744075 | MS.gene052673:CDS | 45.0% |
| !! | CTCTTGCTTTGCTTTTGCCT+CGG | + | chr4.1:1745467-1745486 | None:intergenic | 45.0% |
| !! | GCTGATGGAGGCATTATAAC+TGG | + | chr4.1:1741738-1741757 | None:intergenic | 45.0% |
| !! | GTAGTTGATGGTAGGAAGGT+GGG | - | chr4.1:1743615-1743634 | MS.gene052673:intron | 45.0% |
| !! | TAAGGGTGCAGTTTTTGTCC+TGG | - | chr4.1:1743460-1743479 | MS.gene052673:intron | 45.0% |
| !! | TGTTCTGGAGTTCATTGCTG+AGG | - | chr4.1:1741949-1741968 | MS.gene052673:intron | 45.0% |
| !!! | CGCTTCTGCTGTTGTTTTTG+GGG | - | chr4.1:1743664-1743683 | MS.gene052673:intron | 45.0% |
| !!! | GCGCTTCTGCTGTTGTTTTT+GGG | - | chr4.1:1743663-1743682 | MS.gene052673:intron | 45.0% |
| !!! | GCTGTTGTTTTTGGGGGTTT+AGG | - | chr4.1:1743671-1743690 | MS.gene052673:intron | 45.0% |
| !!! | GCTTCTGCTGTTGTTTTTGG+GGG | - | chr4.1:1743665-1743684 | MS.gene052673:intron | 45.0% |
| !!! | TGCGCTTCTGCTGTTGTTTT+TGG | - | chr4.1:1743662-1743681 | MS.gene052673:intron | 45.0% |
| AAAGGACCAGAGTCCAACTC+TGG | + | chr4.1:1744795-1744814 | None:intergenic | 50.0% | |
| AACTCTTGCCATGGAAGGGT+TGG | - | chr4.1:1742649-1742668 | MS.gene052673:intron | 50.0% | |
| ACAAGCTTGCCCTGAGTTTG+AGG | + | chr4.1:1745284-1745303 | None:intergenic | 50.0% | |
| ACCCTTCCATGGCAAGAGTT+TGG | + | chr4.1:1742649-1742668 | None:intergenic | 50.0% | |
| ACTCAGGGCAAGCTTGTGTT+TGG | - | chr4.1:1745287-1745306 | MS.gene052673:intron | 50.0% | |
| AGCAGCAGGATTCTTGTCCT+TGG | + | chr4.1:1745210-1745229 | None:intergenic | 50.0% | |
| AGGATTCTTGTCCTTGGACC+CGG | + | chr4.1:1745204-1745223 | None:intergenic | 50.0% | |
| AGTTTCTTCTTCCGGGTCCA+AGG | - | chr4.1:1745190-1745209 | MS.gene052673:intron | 50.0% | |
| CAATGGATCCAACCCTTCCA+TGG | + | chr4.1:1742660-1742679 | None:intergenic | 50.0% | |
| CAGAGTTGCATCCTTGCAAG+AGG | + | chr4.1:1742306-1742325 | None:intergenic | 50.0% | |
| CATTGAGACCGACTGTGAAG+TGG | - | chr4.1:1744240-1744259 | MS.gene052673:intron | 50.0% | |
| CCAGAGTCCAACTCTGGTAA+AGG | + | chr4.1:1744789-1744808 | None:intergenic | 50.0% | |
| CCTCCACCAGTTTCTTCTTC+CGG | - | chr4.1:1745182-1745201 | MS.gene052673:intron | 50.0% | |
| CCTTTACCAGAGTTGGACTC+TGG | - | chr4.1:1744786-1744805 | MS.gene052673:intron | 50.0% | |
| CGAGGTGCACTAATAAGCTC+GGG | + | chr4.1:1743908-1743927 | None:intergenic | 50.0% | |
| CGTCTCCCAGATCCAGTAAA+TGG | + | chr4.1:1745134-1745153 | None:intergenic | 50.0% | |
| CTCAGGGCAAGCTTGTGTTT+GGG | - | chr4.1:1745288-1745307 | MS.gene052673:intron | 50.0% | |
| CTCCACCAGTTTCTTCTTCC+GGG | - | chr4.1:1745183-1745202 | MS.gene052673:intron | 50.0% | |
| CTGGAGTTCATTGCTGAGGA+AGG | - | chr4.1:1741953-1741972 | MS.gene052673:intron | 50.0% | |
| CTTATTAGTGCACCTCGCAC+GGG | - | chr4.1:1743911-1743930 | MS.gene052673:intron | 50.0% | |
| GCGAGGTGCACTAATAAGCT+CGG | + | chr4.1:1743909-1743928 | None:intergenic | 50.0% | |
| GCTATCTCCAGTAGTCAAGC+AGG | + | chr4.1:1744146-1744165 | None:intergenic | 50.0% | |
| GCTTATTAGTGCACCTCGCA+CGG | - | chr4.1:1743910-1743929 | MS.gene052673:intron | 50.0% | |
| GGCAAACCATTACCAGCTTC+TGG | + | chr4.1:1744334-1744353 | None:intergenic | 50.0% | |
| GGGGTTTAGGCAGTTCTTTG+TGG | - | chr4.1:1743684-1743703 | MS.gene052673:intron | 50.0% | |
| GTCAGCTGGTTGTGTTCTTG+TGG | - | chr4.1:1743637-1743656 | MS.gene052673:intron | 50.0% | |
| GTGACCTTCTAGTCATGCAG+TGG | - | chr4.1:1742741-1742760 | MS.gene052673:intron | 50.0% | |
| GTGCACTAATAAGCTCGGGT+GGG | + | chr4.1:1743904-1743923 | None:intergenic | 50.0% | |
| TCTCTCTTTGTAGGCAACCG+AGG | - | chr4.1:1745447-1745466 | MS.gene052673:intron | 50.0% | |
| TTCAGGGAAGCAATTGGTGC+GGG | - | chr4.1:1743361-1743380 | MS.gene052673:intron | 50.0% | |
| TTCGTAATGCTGCTGCTGAG+CGG | - | chr4.1:1741912-1741931 | MS.gene052673:intron | 50.0% | |
| TTGGACCCGGAAGAAGAAAC+TGG | + | chr4.1:1745191-1745210 | None:intergenic | 50.0% | |
| ! | GACTCACATGGCCTTAGGAT+TGG | + | chr4.1:1742229-1742248 | None:intergenic | 50.0% |
| ! | GGTGCTGTGTTCGGTTATGA+GGG | - | chr4.1:1743593-1743612 | MS.gene052673:intron | 50.0% |
| ! | GTTTTGCTGCATGGGTAGTG+AGG | - | chr4.1:1743734-1743753 | MS.gene052673:intron | 50.0% |
| ! | TGTTCGAGCCGATTCCTTTG+TGG | - | chr4.1:1743851-1743870 | MS.gene052673:intron | 50.0% |
| !! | ACATCGACTCACATGGCCTT+AGG | + | chr4.1:1742234-1742253 | None:intergenic | 50.0% |
| !! | GAGGGTAGTTGATGGTAGGA+AGG | - | chr4.1:1743611-1743630 | MS.gene052673:intron | 50.0% |
| !! | GGTAGTTGATGGTAGGAAGG+TGG | - | chr4.1:1743614-1743633 | MS.gene052673:intron | 50.0% |
| !! | TCCCTGAATCCATAGTGGAC+AGG | + | chr4.1:1743349-1743368 | None:intergenic | 50.0% |
| AAGGCCCCAGAAGCTGGTAA+TGG | - | chr4.1:1744325-1744344 | MS.gene052673:CDS | 55.0% | |
| AATGGGGAGCCTTGGCACAA+TGG | + | chr4.1:1742776-1742795 | None:intergenic | 55.0% | |
| AGACGATCAAGGGCTGATGG+AGG | + | chr4.1:1741750-1741769 | None:intergenic | 55.0% | |
| AGGCTGCCTGTTTGTGTTGG+TGG | - | chr4.1:1743399-1743418 | MS.gene052673:intron | 55.0% | |
| ATCCCTAAGAGCCGCAAGCA+AGG | + | chr4.1:1743540-1743559 | None:intergenic | 55.0% | |
| CACCAGCCACCAACACAAAC+AGG | + | chr4.1:1743408-1743427 | None:intergenic | 55.0% | |
| CCAAACCGCGGTAAAGAGAC+CGG | - | chr4.1:1745317-1745336 | MS.gene052673:intron | 55.0% | |
| CCATCAGCCCTTGATCGTCT+AGG | - | chr4.1:1741750-1741769 | MS.gene052673:intron | 55.0% | |
| CCGGAAGAAGAAACTGGTGG+AGG | + | chr4.1:1745185-1745204 | None:intergenic | 55.0% | |
| CCTAGACGATCAAGGGCTGA+TGG | + | chr4.1:1741753-1741772 | None:intergenic | 55.0% | |
| CCTTTCCGGTCTCTTTACCG+CGG | + | chr4.1:1745325-1745344 | None:intergenic | 55.0% | |
| CGCCCCACCCTTAGATTACA+AGG | - | chr4.1:1744267-1744286 | MS.gene052673:intron | 55.0% | |
| CTGCAGCCCCAACTTGAAAG+TGG | - | chr4.1:1741622-1741641 | MS.gene052673:intron | 55.0% | |
| GACCCGGAAGAAGAAACTGG+TGG | + | chr4.1:1745188-1745207 | None:intergenic | 55.0% | |
| GATGCTGTTGTGCGACACTG+TGG | - | chr4.1:1743557-1743576 | MS.gene052673:intron | 55.0% | |
| GGCGAAGTCCACTTCACAGT+CGG | + | chr4.1:1744251-1744270 | None:intergenic | 55.0% | |
| GGGGAAATCGGTTGCCACAA+AGG | + | chr4.1:1743868-1743887 | None:intergenic | 55.0% | |
| GGTGCACTAATAAGCTCGGG+TGG | + | chr4.1:1743905-1743924 | None:intergenic | 55.0% | |
| GTGAGGCTGCCTGTTTGTGT+TGG | - | chr4.1:1743396-1743415 | MS.gene052673:intron | 55.0% | |
| TACTGGATCTGGGAGACGCT+TGG | - | chr4.1:1745136-1745155 | MS.gene052673:intron | 55.0% | |
| TCAGGGAAGCAATTGGTGCG+GGG | - | chr4.1:1743362-1743381 | MS.gene052673:intron | 55.0% | |
| TCGTAATGCTGCTGCTGAGC+GGG | - | chr4.1:1741913-1741932 | MS.gene052673:intron | 55.0% | |
| ! | GCGGGGGTAGTTCTTTTGTG+AGG | - | chr4.1:1743379-1743398 | MS.gene052673:intron | 55.0% |
| ! | GCTGAGCGGGTTTCTCATTG+TGG | - | chr4.1:1741926-1741945 | MS.gene052673:intron | 55.0% |
| ! | GGGTGCTGTGTTCGGTTATG+AGG | - | chr4.1:1743592-1743611 | MS.gene052673:intron | 55.0% |
| !! | CACTTTCAAGTTGGGGCTGC+AGG | + | chr4.1:1741624-1741643 | None:intergenic | 55.0% |
| !! | CTGTTGCAGGGTGCTGTGTT+CGG | - | chr4.1:1743584-1743603 | MS.gene052673:intron | 55.0% |
| !! | TGCCTGTTTGTGTTGGTGGC+TGG | - | chr4.1:1743403-1743422 | MS.gene052673:intron | 55.0% |
| ACACTGTGGCTGCCTGTTGC+AGG | - | chr4.1:1743571-1743590 | MS.gene052673:intron | 60.0% | |
| CACTGTGGCTGCCTGTTGCA+GGG | - | chr4.1:1743572-1743591 | MS.gene052673:intron | 60.0% | |
| CAGGGAAGCAATTGGTGCGG+GGG | - | chr4.1:1743363-1743382 | MS.gene052673:intron | 60.0% | |
| CCGCGGTAAAGAGACCGGAA+AGG | - | chr4.1:1745322-1745341 | MS.gene052673:intron | 60.0% | |
| CCGGTCTCTTTACCGCGGTT+TGG | + | chr4.1:1745320-1745339 | None:intergenic | 60.0% | |
| CGAACACAGCACCCTGCAAC+AGG | + | chr4.1:1743586-1743605 | None:intergenic | 60.0% | |
| CTGCATGGGTAGTGAGGCTG+TGG | - | chr4.1:1743740-1743759 | MS.gene052673:intron | 60.0% | |
| GGATCTGGGAGACGCTTGGA+CGG | - | chr4.1:1745140-1745159 | MS.gene052673:intron | 60.0% | |
| GGCCTTGCTTGCGGCTCTTA+GGG | - | chr4.1:1743535-1743554 | MS.gene052673:intron | 60.0% | |
| TCCGGCAGAACGTGGAGCAA+CGG | + | chr4.1:1744305-1744324 | None:intergenic | 60.0% | |
| TGCTCCACGTTCTGCCGGAA+AGG | - | chr4.1:1744306-1744325 | MS.gene052673:CDS | 60.0% | |
| TGGTAGGAAGGTGGGTCAGC+TGG | - | chr4.1:1743623-1743642 | MS.gene052673:intron | 60.0% | |
| TTAACCAACGAGCCCGTGCG+AGG | + | chr4.1:1743926-1743945 | None:intergenic | 60.0% | |
| ! | AGCACAGAAGGACGGACTCC+AGG | + | chr4.1:1743481-1743500 | None:intergenic | 60.0% |
| ! | CAGTGTGGTGGCCTTGCTTG+CGG | - | chr4.1:1743526-1743545 | MS.gene052673:intron | 60.0% |
| ! | TGGCCTTGCTTGCGGCTCTT+AGG | - | chr4.1:1743534-1743553 | MS.gene052673:intron | 60.0% |
| !! | ACCAGCTTCTGGGGCCTTTC+CGG | + | chr4.1:1744323-1744342 | None:intergenic | 60.0% |
| !! | GCTTTGTGCTTTTGGGGGCG+TGG | - | chr4.1:1743498-1743517 | MS.gene052673:intron | 60.0% |
| !! | TGTTGGTGGCTGGTGTGTGC+TGG | - | chr4.1:1743413-1743432 | MS.gene052673:intron | 60.0% |
| CCCGTTGCTCCACGTTCTGC+CGG | - | chr4.1:1744301-1744320 | MS.gene052673:CDS | 65.0% | |
| CCGGCAGAACGTGGAGCAAC+GGG | + | chr4.1:1744304-1744323 | None:intergenic | 65.0% | |
| CGTGGAGCAACGGGCCTTTC+AGG | + | chr4.1:1744295-1744314 | None:intergenic | 65.0% | |
| GGCGTGGTTCAGCAGTGTGG+TGG | - | chr4.1:1743514-1743533 | MS.gene052673:intron | 65.0% | |
| !! | GTGGCTGGTGTGTGCTGGCT+GGG | - | chr4.1:1743418-1743437 | MS.gene052673:intron | 65.0% |
| GCCGGAAAGGCCCCAGAAGC+TGG | - | chr4.1:1744319-1744338 | MS.gene052673:CDS | 70.0% | |
| GGGGCCTTTCCGGCAGAACG+TGG | + | chr4.1:1744313-1744332 | None:intergenic | 70.0% | |
| TGCACCTCGCACGGGCTCGT+TGG | - | chr4.1:1743919-1743938 | MS.gene052673:intron | 70.0% | |
| ! | GGGGGCGTGGTTCAGCAGTG+TGG | - | chr4.1:1743511-1743530 | MS.gene052673:intron | 70.0% |
| ! | GGTGGCTGGTGTGTGCTGGC+TGG | - | chr4.1:1743417-1743436 | MS.gene052673:intron | 70.0% |
| !! | GCTGGTGTGTGCTGGCTGGG+CGG | - | chr4.1:1743421-1743440 | MS.gene052673:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 1740740 | 1745555 | 1740740 | ID=MS.gene052673 |
| chr4.1 | mRNA | 1740740 | 1745555 | 1740740 | ID=MS.gene052673.t1;Parent=MS.gene052673 |
| chr4.1 | exon | 1745553 | 1745555 | 1745553 | ID=MS.gene052673.t1.exon1;Parent=MS.gene052673.t1 |
| chr4.1 | CDS | 1745553 | 1745555 | 1745553 | ID=cds.MS.gene052673.t1;Parent=MS.gene052673.t1 |
| chr4.1 | exon | 1744984 | 1745061 | 1744984 | ID=MS.gene052673.t1.exon2;Parent=MS.gene052673.t1 |
| chr4.1 | CDS | 1744984 | 1745061 | 1744984 | ID=cds.MS.gene052673.t1;Parent=MS.gene052673.t1 |
| chr4.1 | exon | 1744643 | 1744667 | 1744643 | ID=MS.gene052673.t1.exon3;Parent=MS.gene052673.t1 |
| chr4.1 | CDS | 1744643 | 1744667 | 1744643 | ID=cds.MS.gene052673.t1;Parent=MS.gene052673.t1 |
| chr4.1 | exon | 1744524 | 1744556 | 1744524 | ID=MS.gene052673.t1.exon4;Parent=MS.gene052673.t1 |
| chr4.1 | CDS | 1744524 | 1744556 | 1744524 | ID=cds.MS.gene052673.t1;Parent=MS.gene052673.t1 |
| chr4.1 | exon | 1744298 | 1744419 | 1744298 | ID=MS.gene052673.t1.exon5;Parent=MS.gene052673.t1 |
| chr4.1 | CDS | 1744298 | 1744419 | 1744298 | ID=cds.MS.gene052673.t1;Parent=MS.gene052673.t1 |
| chr4.1 | exon | 1744054 | 1744184 | 1744054 | ID=MS.gene052673.t1.exon6;Parent=MS.gene052673.t1 |
| chr4.1 | CDS | 1744054 | 1744184 | 1744054 | ID=cds.MS.gene052673.t1;Parent=MS.gene052673.t1 |
| chr4.1 | exon | 1741955 | 1742178 | 1741955 | ID=MS.gene052673.t1.exon7;Parent=MS.gene052673.t1 |
| chr4.1 | CDS | 1741955 | 1742178 | 1741955 | ID=cds.MS.gene052673.t1;Parent=MS.gene052673.t1 |
| chr4.1 | exon | 1740952 | 1741202 | 1740952 | ID=MS.gene052673.t1.exon8;Parent=MS.gene052673.t1 |
| chr4.1 | CDS | 1740952 | 1741202 | 1740952 | ID=cds.MS.gene052673.t1;Parent=MS.gene052673.t1 |
| chr4.1 | exon | 1740740 | 1740835 | 1740740 | ID=MS.gene052673.t1.exon9;Parent=MS.gene052673.t1 |
| chr4.1 | CDS | 1740740 | 1740835 | 1740740 | ID=cds.MS.gene052673.t1;Parent=MS.gene052673.t1 |
| Gene Sequence |
| Protein sequence |
