Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26846.t1 | XP_003609802.1 | 96 | 321 | 11 | 1 | 119 | 437 | 16 | 336 | 4.90E-173 | 617.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26846.t1 | O23474 | 60.8 | 319 | 107 | 5 | 133 | 437 | 34 | 348 | 7.8e-103 | 375.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26846.t1 | G7JNZ2 | 96.0 | 321 | 11 | 1 | 119 | 437 | 16 | 336 | 3.5e-173 | 617.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene26846 | MS.gene059685 | PPI |
MS.gene26846 | MS.gene21483 | PPI |
MS.gene26846 | MS.gene09669 | PPI |
MS.gene26846 | MS.gene015325 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26846.t1 | MTR_4g122640 | 95.950 | 321 | 11 | 1 | 119 | 437 | 16 | 336 | 0.0 | 639 |
MS.gene26846.t1 | MTR_8g076820 | 49.508 | 305 | 148 | 3 | 138 | 437 | 27 | 330 | 4.19e-101 | 305 |
MS.gene26846.t1 | MTR_7g072510 | 51.505 | 299 | 137 | 3 | 141 | 437 | 20 | 312 | 2.84e-100 | 302 |
MS.gene26846.t1 | MTR_5g021060 | 49.675 | 308 | 149 | 3 | 135 | 437 | 24 | 330 | 7.10e-100 | 301 |
MS.gene26846.t1 | MTR_3g094650 | 50.671 | 298 | 137 | 4 | 141 | 434 | 28 | 319 | 3.83e-98 | 297 |
MS.gene26846.t1 | MTR_5g014100 | 50.000 | 306 | 144 | 3 | 141 | 437 | 26 | 331 | 2.99e-97 | 295 |
MS.gene26846.t1 | MTR_5g083860 | 49.502 | 301 | 142 | 4 | 141 | 437 | 31 | 325 | 4.83e-97 | 294 |
MS.gene26846.t1 | MTR_4g125940 | 49.673 | 306 | 145 | 4 | 139 | 437 | 26 | 329 | 5.17e-96 | 291 |
MS.gene26846.t1 | MTR_4g083710 | 49.669 | 302 | 143 | 4 | 141 | 437 | 27 | 324 | 2.49e-95 | 290 |
MS.gene26846.t1 | MTR_1g022970 | 50.331 | 302 | 145 | 3 | 141 | 437 | 46 | 347 | 3.20e-94 | 288 |
MS.gene26846.t1 | MTR_3g072190 | 50.000 | 306 | 145 | 3 | 134 | 437 | 19 | 318 | 9.05e-94 | 285 |
MS.gene26846.t1 | MTR_7g072480 | 50.167 | 299 | 141 | 3 | 141 | 437 | 24 | 316 | 1.01e-93 | 285 |
MS.gene26846.t1 | MTR_2g040000 | 48.505 | 301 | 145 | 4 | 145 | 437 | 33 | 331 | 3.56e-93 | 285 |
MS.gene26846.t1 | MTR_4g029170 | 48.534 | 307 | 148 | 5 | 135 | 437 | 21 | 321 | 4.39e-93 | 284 |
MS.gene26846.t1 | MTR_4g029200 | 48.852 | 305 | 148 | 3 | 135 | 437 | 40 | 338 | 4.46e-92 | 282 |
MS.gene26846.t1 | MTR_3g094670 | 50.336 | 298 | 138 | 4 | 141 | 434 | 28 | 319 | 3.83e-91 | 279 |
MS.gene26846.t1 | MTR_3g466200 | 48.013 | 302 | 146 | 5 | 141 | 437 | 25 | 320 | 1.63e-90 | 277 |
MS.gene26846.t1 | MTR_5g074970 | 50.164 | 305 | 140 | 5 | 139 | 437 | 28 | 326 | 3.36e-90 | 276 |
MS.gene26846.t1 | MTR_5g017860 | 49.342 | 304 | 147 | 5 | 139 | 437 | 25 | 326 | 5.34e-90 | 276 |
MS.gene26846.t1 | MTR_4g029190 | 49.320 | 294 | 139 | 4 | 148 | 437 | 53 | 340 | 1.32e-89 | 276 |
MS.gene26846.t1 | MTR_2g029560 | 45.695 | 302 | 159 | 3 | 141 | 437 | 24 | 325 | 3.00e-89 | 275 |
MS.gene26846.t1 | MTR_4g125940 | 51.273 | 275 | 125 | 4 | 170 | 437 | 2 | 274 | 4.15e-89 | 272 |
MS.gene26846.t1 | MTR_5g017850 | 48.684 | 304 | 149 | 5 | 139 | 437 | 25 | 326 | 4.74e-89 | 274 |
MS.gene26846.t1 | MTR_2g029750 | 46.865 | 303 | 154 | 4 | 141 | 437 | 29 | 330 | 7.33e-89 | 274 |
MS.gene26846.t1 | MTR_2g084020 | 44.554 | 303 | 161 | 2 | 137 | 437 | 21 | 318 | 7.25e-88 | 270 |
MS.gene26846.t1 | MTR_1g054205 | 46.535 | 303 | 156 | 4 | 141 | 437 | 24 | 326 | 1.18e-87 | 270 |
MS.gene26846.t1 | MTR_2g029730 | 46.358 | 302 | 157 | 3 | 141 | 437 | 25 | 326 | 1.31e-87 | 271 |
MS.gene26846.t1 | MTR_4g074995 | 47.682 | 302 | 136 | 5 | 141 | 437 | 24 | 308 | 1.73e-87 | 269 |
MS.gene26846.t1 | MTR_2g029800 | 44.231 | 312 | 161 | 5 | 138 | 437 | 20 | 330 | 2.79e-87 | 270 |
MS.gene26846.t1 | MTR_7g093370 | 45.545 | 303 | 159 | 4 | 141 | 437 | 69 | 371 | 4.93e-87 | 270 |
MS.gene26846.t1 | MTR_3g094630 | 49.169 | 301 | 143 | 4 | 141 | 437 | 28 | 322 | 8.31e-87 | 268 |
MS.gene26846.t1 | MTR_2g084010 | 44.224 | 303 | 162 | 2 | 137 | 437 | 21 | 318 | 1.61e-86 | 267 |
MS.gene26846.t1 | MTR_3g466180 | 49.164 | 299 | 144 | 3 | 141 | 437 | 31 | 323 | 2.06e-86 | 267 |
MS.gene26846.t1 | MTR_2g029815 | 46.205 | 303 | 156 | 4 | 141 | 437 | 29 | 330 | 3.88e-86 | 267 |
MS.gene26846.t1 | MTR_5g049280 | 46.774 | 310 | 147 | 9 | 141 | 437 | 33 | 337 | 5.71e-86 | 266 |
MS.gene26846.t1 | MTR_4g029180 | 46.980 | 298 | 148 | 5 | 144 | 437 | 30 | 321 | 3.52e-85 | 263 |
MS.gene26846.t1 | MTR_5g074860 | 47.000 | 300 | 147 | 6 | 141 | 434 | 29 | 322 | 4.17e-85 | 263 |
MS.gene26846.t1 | MTR_2g084080 | 43.894 | 303 | 162 | 3 | 137 | 437 | 21 | 317 | 1.38e-84 | 262 |
MS.gene26846.t1 | MTR_2g084000 | 43.478 | 299 | 162 | 2 | 141 | 437 | 26 | 319 | 2.14e-84 | 261 |
MS.gene26846.t1 | MTR_2g029860 | 44.551 | 312 | 166 | 4 | 132 | 437 | 20 | 330 | 3.22e-84 | 262 |
MS.gene26846.t1 | MTR_2g029740 | 45.485 | 299 | 156 | 4 | 145 | 437 | 33 | 330 | 4.98e-84 | 262 |
MS.gene26846.t1 | MTR_2g084110 | 44.079 | 304 | 160 | 4 | 137 | 437 | 21 | 317 | 3.39e-83 | 258 |
MS.gene26846.t1 | MTR_7g026990 | 46.429 | 308 | 156 | 4 | 132 | 437 | 22 | 322 | 4.71e-83 | 258 |
MS.gene26846.t1 | MTR_4g030890 | 43.974 | 307 | 164 | 5 | 135 | 437 | 94 | 396 | 5.22e-83 | 261 |
MS.gene26846.t1 | MTR_2g029910 | 44.918 | 305 | 158 | 6 | 141 | 437 | 30 | 332 | 8.88e-83 | 258 |
MS.gene26846.t1 | MTR_2g029820 | 44.554 | 303 | 161 | 4 | 141 | 437 | 29 | 330 | 1.29e-82 | 258 |
MS.gene26846.t1 | MTR_3g467600 | 45.631 | 309 | 157 | 5 | 135 | 437 | 21 | 324 | 1.70e-82 | 257 |
MS.gene26846.t1 | MTR_2g084090 | 42.763 | 304 | 165 | 4 | 137 | 437 | 21 | 318 | 2.58e-82 | 256 |
MS.gene26846.t1 | MTR_2g029830 | 44.224 | 303 | 162 | 4 | 141 | 437 | 28 | 329 | 3.25e-82 | 257 |
MS.gene26846.t1 | MTR_5g074760 | 44.951 | 307 | 157 | 6 | 137 | 437 | 21 | 321 | 7.13e-82 | 255 |
MS.gene26846.t1 | MTR_4g031140 | 42.623 | 305 | 167 | 5 | 137 | 437 | 24 | 324 | 8.77e-82 | 256 |
MS.gene26846.t1 | MTR_2g028980 | 44.631 | 298 | 160 | 3 | 145 | 437 | 33 | 330 | 1.05e-81 | 256 |
MS.gene26846.t1 | MTR_5g074710 | 44.951 | 307 | 157 | 6 | 137 | 437 | 21 | 321 | 1.82e-81 | 254 |
MS.gene26846.t1 | MTR_4g074990 | 45.364 | 302 | 140 | 5 | 141 | 437 | 24 | 305 | 2.00e-81 | 253 |
MS.gene26846.t1 | MTR_5g074740 | 44.951 | 307 | 157 | 6 | 137 | 437 | 21 | 321 | 1.95e-80 | 251 |
MS.gene26846.t1 | MTR_2g029850 | 43.894 | 303 | 163 | 4 | 141 | 437 | 29 | 330 | 2.45e-79 | 249 |
MS.gene26846.t1 | MTR_1g115900 | 44.444 | 306 | 160 | 4 | 136 | 437 | 22 | 321 | 2.50e-79 | 249 |
MS.gene26846.t1 | MTR_3g072190 | 50.988 | 253 | 118 | 2 | 185 | 437 | 5 | 251 | 5.49e-77 | 240 |
MS.gene26846.t1 | MTR_1g101830 | 43.854 | 301 | 160 | 7 | 141 | 437 | 27 | 322 | 1.68e-75 | 239 |
MS.gene26846.t1 | MTR_1g077000 | 43.813 | 299 | 156 | 6 | 141 | 437 | 39 | 327 | 1.34e-74 | 236 |
MS.gene26846.t1 | MTR_2g008710 | 45.426 | 317 | 149 | 11 | 131 | 437 | 23 | 325 | 1.73e-73 | 234 |
MS.gene26846.t1 | MTR_3g092990 | 42.623 | 305 | 167 | 5 | 139 | 437 | 24 | 326 | 1.98e-73 | 233 |
MS.gene26846.t1 | MTR_4g074980 | 43.831 | 308 | 140 | 7 | 133 | 437 | 17 | 294 | 2.27e-73 | 232 |
MS.gene26846.t1 | MTR_4g074980 | 50.644 | 233 | 106 | 4 | 141 | 368 | 25 | 253 | 2.76e-73 | 231 |
MS.gene26846.t1 | MTR_1g038680 | 44.371 | 302 | 155 | 8 | 146 | 437 | 34 | 332 | 4.33e-73 | 233 |
MS.gene26846.t1 | MTR_5g022870 | 41.639 | 305 | 167 | 7 | 137 | 437 | 19 | 316 | 7.35e-73 | 232 |
MS.gene26846.t1 | MTR_1g025980 | 43.322 | 307 | 162 | 8 | 135 | 436 | 18 | 317 | 4.26e-72 | 230 |
MS.gene26846.t1 | MTR_7g107520 | 43.607 | 305 | 161 | 7 | 138 | 437 | 22 | 320 | 1.84e-71 | 228 |
MS.gene26846.t1 | MTR_0155s0040 | 39.867 | 301 | 169 | 6 | 139 | 437 | 25 | 315 | 1.74e-70 | 226 |
MS.gene26846.t1 | MTR_2g088770 | 41.234 | 308 | 170 | 8 | 137 | 437 | 22 | 325 | 4.58e-70 | 225 |
MS.gene26846.t1 | MTR_8g075100 | 40.328 | 305 | 171 | 6 | 137 | 437 | 22 | 319 | 6.50e-70 | 224 |
MS.gene26846.t1 | MTR_4g133800 | 41.528 | 301 | 154 | 9 | 146 | 437 | 46 | 333 | 1.82e-69 | 223 |
MS.gene26846.t1 | MTR_7g086820 | 39.796 | 294 | 169 | 5 | 146 | 437 | 25 | 312 | 1.63e-68 | 220 |
MS.gene26846.t1 | MTR_2g029830 | 44.747 | 257 | 137 | 3 | 185 | 437 | 6 | 261 | 3.06e-68 | 219 |
MS.gene26846.t1 | MTR_4g046713 | 40.065 | 307 | 175 | 6 | 137 | 437 | 23 | 326 | 1.12e-67 | 219 |
MS.gene26846.t1 | MTR_6g027440 | 41.356 | 295 | 166 | 5 | 145 | 437 | 25 | 314 | 2.94e-67 | 217 |
MS.gene26846.t1 | MTR_7g086870 | 39.799 | 299 | 169 | 6 | 141 | 437 | 22 | 311 | 4.64e-67 | 216 |
MS.gene26846.t1 | MTR_1g086320 | 39.940 | 333 | 179 | 7 | 113 | 437 | 14 | 333 | 1.41e-65 | 213 |
MS.gene26846.t1 | MTR_8g062780 | 40.065 | 307 | 177 | 5 | 137 | 437 | 19 | 324 | 4.47e-65 | 212 |
MS.gene26846.t1 | MTR_4g114210 | 41.176 | 306 | 165 | 7 | 141 | 437 | 21 | 320 | 8.11e-65 | 211 |
MS.gene26846.t1 | MTR_3g092990 | 40.594 | 303 | 165 | 5 | 139 | 437 | 24 | 315 | 3.02e-64 | 209 |
MS.gene26846.t1 | MTR_5g074860 | 40.667 | 300 | 127 | 6 | 141 | 434 | 29 | 283 | 6.76e-64 | 207 |
MS.gene26846.t1 | MTR_1g086490 | 38.529 | 340 | 181 | 7 | 113 | 437 | 14 | 340 | 8.65e-64 | 209 |
MS.gene26846.t1 | MTR_1g009750 | 40.453 | 309 | 171 | 9 | 138 | 437 | 24 | 328 | 1.90e-63 | 207 |
MS.gene26846.t1 | MTR_4g087965 | 40.656 | 305 | 169 | 8 | 141 | 435 | 42 | 344 | 7.53e-62 | 204 |
MS.gene26846.t1 | MTR_2g437770 | 39.159 | 309 | 173 | 8 | 134 | 437 | 43 | 341 | 8.30e-62 | 204 |
MS.gene26846.t1 | MTR_1g090760 | 39.344 | 305 | 175 | 7 | 141 | 437 | 28 | 330 | 1.38e-61 | 203 |
MS.gene26846.t1 | MTR_0286s0010 | 40.000 | 305 | 175 | 5 | 139 | 437 | 32 | 334 | 3.59e-61 | 202 |
MS.gene26846.t1 | MTR_6g008075 | 40.000 | 305 | 175 | 5 | 139 | 437 | 32 | 334 | 3.59e-61 | 202 |
MS.gene26846.t1 | MTR_7g029030 | 38.333 | 300 | 178 | 5 | 141 | 437 | 25 | 320 | 3.54e-60 | 199 |
MS.gene26846.t1 | MTR_4g095450 | 37.377 | 305 | 182 | 5 | 137 | 436 | 23 | 323 | 5.96e-60 | 198 |
MS.gene26846.t1 | MTR_2g008160 | 38.961 | 308 | 173 | 8 | 139 | 437 | 22 | 323 | 1.28e-59 | 197 |
MS.gene26846.t1 | MTR_6g043460 | 39.057 | 297 | 169 | 7 | 141 | 433 | 36 | 324 | 2.83e-59 | 197 |
MS.gene26846.t1 | MTR_6g043280 | 37.667 | 300 | 176 | 7 | 141 | 437 | 41 | 332 | 1.96e-58 | 195 |
MS.gene26846.t1 | MTR_6g043240 | 38.206 | 301 | 171 | 9 | 141 | 437 | 42 | 331 | 2.34e-58 | 195 |
MS.gene26846.t1 | MTR_2g008730 | 41.333 | 300 | 138 | 9 | 146 | 437 | 32 | 301 | 6.19e-58 | 192 |
MS.gene26846.t1 | MTR_3g105790 | 38.944 | 303 | 174 | 4 | 141 | 437 | 25 | 322 | 6.04e-57 | 191 |
MS.gene26846.t1 | MTR_4g132490 | 35.974 | 303 | 190 | 3 | 138 | 437 | 26 | 327 | 8.08e-56 | 188 |
MS.gene26846.t1 | MTR_4g127670 | 37.542 | 301 | 175 | 6 | 141 | 433 | 24 | 319 | 1.30e-55 | 187 |
MS.gene26846.t1 | MTR_2g067440 | 36.970 | 330 | 171 | 8 | 138 | 433 | 57 | 383 | 3.73e-55 | 188 |
MS.gene26846.t1 | MTR_5g016010 | 34.091 | 308 | 193 | 6 | 137 | 436 | 23 | 328 | 4.20e-55 | 186 |
MS.gene26846.t1 | MTR_2g078610 | 36.446 | 332 | 173 | 8 | 138 | 433 | 73 | 402 | 8.19e-52 | 179 |
MS.gene26846.t1 | MTR_2g077990 | 36.747 | 332 | 172 | 9 | 138 | 433 | 73 | 402 | 2.96e-51 | 178 |
MS.gene26846.t1 | MTR_1g009750 | 36.808 | 307 | 168 | 10 | 138 | 437 | 24 | 311 | 4.12e-51 | 175 |
MS.gene26846.t1 | MTR_2g099175 | 36.213 | 301 | 177 | 6 | 146 | 437 | 41 | 335 | 1.18e-49 | 172 |
MS.gene26846.t1 | MTR_7g072490 | 42.918 | 233 | 73 | 4 | 185 | 417 | 2 | 174 | 2.97e-49 | 167 |
MS.gene26846.t1 | MTR_2g008160 | 37.459 | 307 | 144 | 11 | 139 | 437 | 22 | 288 | 5.74e-49 | 169 |
MS.gene26846.t1 | MTR_2g078280 | 36.957 | 322 | 165 | 9 | 138 | 423 | 73 | 392 | 7.21e-49 | 171 |
MS.gene26846.t1 | MTR_5g033470 | 33.623 | 345 | 207 | 11 | 107 | 437 | 41 | 377 | 7.91e-49 | 171 |
MS.gene26846.t1 | MTR_1g066380 | 33.553 | 304 | 192 | 5 | 139 | 437 | 25 | 323 | 5.36e-48 | 167 |
MS.gene26846.t1 | MTR_1g066640 | 32.895 | 304 | 194 | 5 | 139 | 437 | 25 | 323 | 3.25e-47 | 165 |
MS.gene26846.t1 | MTR_1g066710 | 32.237 | 304 | 196 | 5 | 139 | 437 | 25 | 323 | 9.67e-47 | 164 |
MS.gene26846.t1 | MTR_1g066680 | 33.553 | 304 | 191 | 7 | 139 | 437 | 25 | 322 | 1.19e-45 | 161 |
MS.gene26846.t1 | MTR_0147s0010 | 33.651 | 315 | 174 | 6 | 141 | 433 | 77 | 378 | 2.75e-45 | 161 |
MS.gene26846.t1 | MTR_3g072210 | 44.974 | 189 | 98 | 2 | 250 | 437 | 55 | 238 | 1.39e-42 | 150 |
MS.gene26846.t1 | MTR_2g067450 | 34.653 | 303 | 187 | 8 | 138 | 433 | 8 | 306 | 3.43e-41 | 149 |
MS.gene26846.t1 | MTR_4g122635 | 61.481 | 135 | 26 | 3 | 6 | 122 | 1 | 127 | 4.56e-41 | 142 |
MS.gene26846.t1 | MTR_3g105790 | 38.559 | 236 | 140 | 2 | 206 | 437 | 12 | 246 | 5.36e-41 | 146 |
MS.gene26846.t1 | MTR_2g008160 | 44.186 | 172 | 90 | 4 | 139 | 308 | 22 | 189 | 1.38e-40 | 144 |
MS.gene26846.t1 | MTR_5g074700 | 36.245 | 229 | 124 | 6 | 212 | 437 | 5 | 214 | 6.98e-40 | 142 |
MS.gene26846.t1 | MTR_1g066380 | 32.941 | 255 | 163 | 4 | 186 | 437 | 6 | 255 | 4.88e-39 | 141 |
MS.gene26846.t1 | MTR_4g132110 | 30.132 | 302 | 201 | 5 | 141 | 437 | 32 | 328 | 2.06e-38 | 142 |
MS.gene26846.t1 | MTR_3g072260 | 57.759 | 116 | 47 | 1 | 134 | 247 | 19 | 134 | 3.75e-38 | 135 |
MS.gene26846.t1 | MTR_4g132110 | 29.642 | 307 | 201 | 6 | 141 | 437 | 32 | 333 | 2.34e-36 | 136 |
MS.gene26846.t1 | MTR_2g029880 | 37.696 | 191 | 104 | 5 | 251 | 437 | 9 | 188 | 1.12e-32 | 123 |
MS.gene26846.t1 | MTR_4g122610 | 43.448 | 145 | 29 | 1 | 1 | 92 | 1 | 145 | 1.57e-29 | 113 |
MS.gene26846.t1 | MTR_1g089005 | 42.361 | 144 | 70 | 3 | 138 | 273 | 12 | 150 | 5.23e-26 | 103 |
MS.gene26846.t1 | MTR_7g086790 | 36.898 | 187 | 98 | 5 | 186 | 372 | 17 | 183 | 9.88e-26 | 103 |
MS.gene26846.t1 | MTR_7g072580 | 44.079 | 152 | 43 | 6 | 1 | 116 | 1 | 146 | 2.55e-25 | 101 |
MS.gene26846.t1 | MTR_7g072580 | 44.595 | 148 | 40 | 6 | 1 | 112 | 1 | 142 | 1.12e-23 | 98.2 |
MS.gene26846.t1 | MTR_4g031040 | 31.792 | 173 | 76 | 3 | 198 | 370 | 1 | 131 | 5.13e-23 | 94.7 |
MS.gene26846.t1 | MTR_3g462850 | 39.456 | 147 | 71 | 6 | 303 | 437 | 9 | 149 | 5.54e-23 | 95.1 |
MS.gene26846.t1 | MTR_7g072580 | 44.595 | 148 | 40 | 6 | 1 | 112 | 1 | 142 | 7.59e-23 | 97.1 |
MS.gene26846.t1 | MTR_4g029010 | 44.667 | 150 | 41 | 6 | 1 | 114 | 1 | 144 | 1.27e-22 | 94.7 |
MS.gene26846.t1 | MTR_4g029010 | 44.595 | 148 | 40 | 6 | 1 | 112 | 1 | 142 | 2.19e-22 | 93.2 |
MS.gene26846.t1 | MTR_4g029010 | 44.595 | 148 | 40 | 6 | 1 | 112 | 1 | 142 | 1.21e-21 | 92.8 |
MS.gene26846.t1 | MTR_5g058120 | 32.500 | 160 | 98 | 3 | 274 | 433 | 6 | 155 | 1.54e-19 | 88.2 |
MS.gene26846.t1 | MTR_3g107060 | 29.008 | 262 | 113 | 10 | 172 | 416 | 105 | 310 | 5.25e-17 | 82.0 |
MS.gene26846.t1 | MTR_6g048160 | 56.338 | 71 | 25 | 3 | 180 | 248 | 22 | 88 | 9.79e-17 | 75.5 |
MS.gene26846.t1 | MTR_4g073410 | 28.625 | 269 | 126 | 9 | 172 | 425 | 32 | 249 | 1.58e-16 | 80.1 |
MS.gene26846.t1 | MTR_7g086810 | 36.207 | 116 | 50 | 2 | 141 | 256 | 6 | 97 | 1.59e-16 | 79.0 |
MS.gene26846.t1 | MTR_4g114220 | 36.806 | 144 | 61 | 6 | 152 | 285 | 18 | 141 | 2.06e-16 | 76.3 |
MS.gene26846.t1 | MTR_3g065900 | 40.741 | 135 | 55 | 6 | 1 | 116 | 15 | 143 | 1.38e-15 | 75.5 |
MS.gene26846.t1 | MTR_7g086785 | 45.946 | 74 | 39 | 1 | 183 | 256 | 2 | 74 | 1.12e-14 | 71.2 |
MS.gene26846.t1 | MTR_4g061140 | 31.122 | 196 | 92 | 7 | 232 | 422 | 57 | 214 | 4.26e-14 | 71.6 |
MS.gene26846.t1 | MTR_4g061140 | 31.122 | 196 | 92 | 7 | 232 | 422 | 91 | 248 | 6.26e-14 | 71.6 |
MS.gene26846.t1 | MTR_4g061140 | 30.928 | 194 | 91 | 7 | 232 | 420 | 91 | 246 | 9.74e-14 | 71.2 |
MS.gene26846.t1 | MTR_5g074770 | 39.773 | 88 | 51 | 2 | 350 | 436 | 22 | 108 | 1.09e-13 | 67.4 |
MS.gene26846.t1 | MTR_3g066070 | 41.667 | 108 | 44 | 3 | 26 | 114 | 53 | 160 | 1.74e-13 | 68.6 |
MS.gene26846.t1 | MTR_2g029930 | 40.964 | 83 | 33 | 2 | 158 | 224 | 22 | 104 | 5.02e-13 | 65.5 |
MS.gene26846.t1 | MTR_1g098320 | 39.506 | 81 | 48 | 1 | 357 | 437 | 45 | 124 | 5.10e-13 | 66.6 |
MS.gene26846.t1 | MTR_3g066070 | 41.818 | 110 | 45 | 3 | 26 | 116 | 53 | 162 | 6.41e-13 | 68.2 |
MS.gene26846.t1 | MTR_3g066070 | 41.818 | 110 | 45 | 3 | 26 | 116 | 53 | 162 | 6.41e-13 | 68.2 |
MS.gene26846.t1 | MTR_3g066070 | 41.818 | 110 | 45 | 3 | 26 | 116 | 53 | 162 | 1.17e-12 | 67.4 |
MS.gene26846.t1 | MTR_4g012865 | 44.444 | 72 | 38 | 1 | 141 | 210 | 77 | 148 | 1.84e-12 | 65.5 |
MS.gene26846.t1 | MTR_3g066070 | 42.308 | 104 | 41 | 3 | 32 | 116 | 10 | 113 | 8.24e-12 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26846.t1 | AT4G16270 | 60.815 | 319 | 107 | 5 | 133 | 437 | 34 | 348 | 9.58e-133 | 386 |
MS.gene26846.t1 | AT2G35380 | 52.090 | 311 | 140 | 3 | 136 | 437 | 25 | 335 | 1.05e-102 | 309 |
MS.gene26846.t1 | AT5G66390 | 48.077 | 312 | 154 | 3 | 130 | 437 | 26 | 333 | 4.64e-99 | 300 |
MS.gene26846.t1 | AT1G44970 | 51.316 | 304 | 143 | 3 | 139 | 437 | 43 | 346 | 3.47e-98 | 298 |
MS.gene26846.t1 | AT2G18150 | 47.267 | 311 | 157 | 3 | 131 | 437 | 29 | 336 | 3.03e-97 | 295 |
MS.gene26846.t1 | AT5G05340 | 50.671 | 298 | 135 | 5 | 141 | 433 | 30 | 320 | 6.70e-97 | 294 |
MS.gene26846.t1 | AT4G36430 | 46.753 | 308 | 160 | 2 | 134 | 437 | 23 | 330 | 8.68e-97 | 294 |
MS.gene26846.t1 | AT5G06720 | 48.344 | 302 | 151 | 3 | 141 | 437 | 32 | 333 | 5.08e-95 | 289 |
MS.gene26846.t1 | AT3G50990 | 47.883 | 307 | 156 | 2 | 135 | 437 | 35 | 341 | 5.64e-94 | 287 |
MS.gene26846.t1 | AT2G18140 | 46.302 | 311 | 160 | 3 | 131 | 437 | 28 | 335 | 1.16e-93 | 286 |
MS.gene26846.t1 | AT5G06730 | 46.358 | 302 | 157 | 3 | 141 | 437 | 33 | 334 | 6.33e-91 | 280 |
MS.gene26846.t1 | AT1G49570 | 47.352 | 321 | 159 | 5 | 122 | 433 | 27 | 346 | 1.05e-90 | 279 |
MS.gene26846.t1 | AT5G58400 | 50.836 | 299 | 136 | 5 | 141 | 434 | 30 | 322 | 1.18e-90 | 278 |
MS.gene26846.t1 | AT2G38390 | 47.419 | 310 | 155 | 5 | 135 | 437 | 25 | 333 | 3.16e-90 | 278 |
MS.gene26846.t1 | AT1G68850 | 47.249 | 309 | 150 | 7 | 140 | 437 | 29 | 335 | 1.35e-89 | 275 |
MS.gene26846.t1 | AT5G19890 | 48.026 | 304 | 145 | 6 | 141 | 437 | 30 | 327 | 3.11e-88 | 271 |
MS.gene26846.t1 | AT5G58390 | 49.164 | 299 | 141 | 5 | 141 | 434 | 21 | 313 | 6.73e-86 | 265 |
MS.gene26846.t1 | AT4G08780 | 43.934 | 305 | 162 | 5 | 141 | 437 | 24 | 327 | 3.03e-84 | 262 |
MS.gene26846.t1 | AT4G08770 | 44.737 | 304 | 161 | 4 | 141 | 437 | 24 | 327 | 5.84e-84 | 261 |
MS.gene26846.t1 | AT2G22420 | 44.590 | 305 | 161 | 5 | 137 | 437 | 19 | 319 | 5.92e-84 | 261 |
MS.gene26846.t1 | AT1G14550 | 47.000 | 300 | 152 | 4 | 141 | 437 | 26 | 321 | 2.20e-83 | 259 |
MS.gene26846.t1 | AT2G38380 | 45.484 | 310 | 161 | 5 | 135 | 437 | 25 | 333 | 1.44e-82 | 258 |
MS.gene26846.t1 | AT3G32980 | 44.737 | 304 | 161 | 4 | 141 | 437 | 31 | 334 | 4.68e-82 | 256 |
MS.gene26846.t1 | AT3G49120 | 44.737 | 304 | 161 | 4 | 141 | 437 | 32 | 335 | 2.88e-80 | 252 |
MS.gene26846.t1 | AT3G49110 | 44.408 | 304 | 162 | 4 | 141 | 437 | 33 | 336 | 2.13e-79 | 250 |
MS.gene26846.t1 | AT1G14540 | 45.485 | 299 | 157 | 3 | 141 | 437 | 21 | 315 | 1.03e-78 | 247 |
MS.gene26846.t1 | AT5G51890 | 45.033 | 302 | 156 | 7 | 141 | 437 | 26 | 322 | 3.55e-77 | 243 |
MS.gene26846.t1 | AT2G35380 | 50.000 | 246 | 116 | 2 | 199 | 437 | 2 | 247 | 8.43e-76 | 237 |
MS.gene26846.t1 | AT5G19880 | 44.300 | 307 | 159 | 8 | 141 | 437 | 25 | 329 | 1.23e-73 | 234 |
MS.gene26846.t1 | AT1G71695 | 42.953 | 298 | 159 | 7 | 141 | 433 | 44 | 335 | 2.02e-72 | 232 |
MS.gene26846.t1 | AT5G64120 | 42.525 | 301 | 162 | 7 | 142 | 437 | 34 | 328 | 1.09e-70 | 226 |
MS.gene26846.t1 | AT1G05260 | 41.391 | 302 | 170 | 5 | 141 | 437 | 26 | 325 | 7.60e-69 | 222 |
MS.gene26846.t1 | AT5G17820 | 41.860 | 301 | 160 | 7 | 141 | 437 | 24 | 313 | 2.97e-68 | 220 |
MS.gene26846.t1 | AT4G17690 | 42.053 | 302 | 165 | 6 | 141 | 437 | 26 | 322 | 3.83e-68 | 220 |
MS.gene26846.t1 | AT4G33420 | 42.809 | 299 | 159 | 7 | 141 | 437 | 37 | 325 | 4.14e-68 | 220 |
MS.gene26846.t1 | AT4G11290 | 42.434 | 304 | 166 | 7 | 141 | 437 | 25 | 326 | 5.28e-68 | 219 |
MS.gene26846.t1 | AT3G21770 | 40.333 | 300 | 172 | 5 | 141 | 435 | 29 | 326 | 6.62e-68 | 219 |
MS.gene26846.t1 | AT5G47000 | 41.391 | 302 | 168 | 6 | 141 | 437 | 33 | 330 | 8.52e-68 | 219 |
MS.gene26846.t1 | AT2G41480 | 42.715 | 302 | 156 | 9 | 146 | 437 | 34 | 328 | 1.61e-67 | 218 |
MS.gene26846.t1 | AT4G33420 | 42.809 | 299 | 159 | 7 | 141 | 437 | 84 | 372 | 3.10e-67 | 219 |
MS.gene26846.t1 | AT5G17820 | 41.860 | 301 | 160 | 7 | 141 | 437 | 77 | 366 | 5.77e-67 | 218 |
MS.gene26846.t1 | AT1G24110 | 39.465 | 299 | 173 | 6 | 141 | 433 | 22 | 318 | 1.22e-65 | 213 |
MS.gene26846.t1 | AT2G24800 | 41.447 | 304 | 166 | 5 | 141 | 437 | 31 | 329 | 3.71e-65 | 212 |
MS.gene26846.t1 | AT5G40150 | 39.604 | 303 | 175 | 5 | 139 | 437 | 30 | 328 | 6.91e-65 | 211 |
MS.gene26846.t1 | AT3G28200 | 38.614 | 303 | 177 | 5 | 139 | 437 | 19 | 316 | 1.29e-64 | 210 |
MS.gene26846.t1 | AT3G03670 | 39.262 | 298 | 173 | 5 | 145 | 437 | 27 | 321 | 2.24e-64 | 210 |
MS.gene26846.t1 | AT5G15180 | 37.748 | 302 | 179 | 6 | 141 | 437 | 32 | 329 | 2.64e-64 | 210 |
MS.gene26846.t1 | AT5G39580 | 41.479 | 311 | 166 | 8 | 131 | 437 | 21 | 319 | 3.01e-64 | 209 |
MS.gene26846.t1 | AT5G42180 | 40.532 | 301 | 167 | 8 | 141 | 436 | 23 | 316 | 3.63e-64 | 209 |
MS.gene26846.t1 | AT1G30870 | 41.667 | 300 | 159 | 8 | 141 | 433 | 51 | 341 | 4.41e-64 | 210 |
MS.gene26846.t1 | AT3G01190 | 39.073 | 302 | 173 | 7 | 141 | 437 | 26 | 321 | 3.55e-63 | 207 |
MS.gene26846.t1 | AT5G64110 | 43.234 | 303 | 156 | 10 | 143 | 437 | 36 | 330 | 7.25e-62 | 204 |
MS.gene26846.t1 | AT4G37520 | 38.487 | 304 | 179 | 5 | 141 | 437 | 27 | 329 | 1.23e-61 | 203 |
MS.gene26846.t1 | AT1G05240 | 39.344 | 305 | 172 | 8 | 141 | 437 | 26 | 325 | 3.25e-61 | 202 |
MS.gene26846.t1 | AT1G05250 | 39.344 | 305 | 172 | 8 | 141 | 437 | 26 | 325 | 3.25e-61 | 202 |
MS.gene26846.t1 | AT4G33870 | 36.145 | 332 | 171 | 6 | 141 | 433 | 68 | 397 | 4.12e-61 | 204 |
MS.gene26846.t1 | AT4G26010 | 40.066 | 302 | 162 | 9 | 141 | 437 | 22 | 309 | 5.13e-61 | 201 |
MS.gene26846.t1 | AT4G26010 | 40.066 | 302 | 162 | 9 | 141 | 437 | 50 | 337 | 7.30e-61 | 201 |
MS.gene26846.t1 | AT4G31760 | 38.944 | 303 | 174 | 4 | 141 | 437 | 29 | 326 | 1.76e-60 | 200 |
MS.gene26846.t1 | AT1G77100 | 41.275 | 298 | 162 | 7 | 146 | 437 | 29 | 319 | 1.78e-60 | 200 |
MS.gene26846.t1 | AT4G37520 | 37.829 | 304 | 178 | 6 | 141 | 437 | 27 | 326 | 1.92e-59 | 197 |
MS.gene26846.t1 | AT3G49960 | 37.419 | 310 | 182 | 6 | 137 | 437 | 23 | 329 | 4.89e-59 | 196 |
MS.gene26846.t1 | AT2G18980 | 37.377 | 305 | 177 | 6 | 141 | 437 | 25 | 323 | 5.58e-59 | 196 |
MS.gene26846.t1 | AT5G14130 | 38.312 | 308 | 180 | 7 | 136 | 437 | 27 | 330 | 1.21e-58 | 195 |
MS.gene26846.t1 | AT4G37530 | 38.111 | 307 | 176 | 8 | 141 | 437 | 27 | 329 | 2.38e-58 | 194 |
MS.gene26846.t1 | AT5G14130 | 38.312 | 308 | 180 | 7 | 136 | 437 | 68 | 371 | 3.56e-58 | 195 |
MS.gene26846.t1 | AT5G67400 | 36.364 | 308 | 188 | 5 | 137 | 437 | 23 | 329 | 5.17e-58 | 194 |
MS.gene26846.t1 | AT4G25980 | 38.436 | 307 | 173 | 9 | 141 | 437 | 26 | 326 | 6.34e-58 | 193 |
MS.gene26846.t1 | AT1G34510 | 35.932 | 295 | 174 | 7 | 146 | 437 | 27 | 309 | 3.78e-57 | 191 |
MS.gene26846.t1 | AT2G34060 | 38.235 | 306 | 177 | 8 | 141 | 436 | 42 | 345 | 8.08e-57 | 191 |
MS.gene26846.t1 | AT2G39040 | 39.482 | 309 | 171 | 9 | 141 | 437 | 46 | 350 | 2.97e-56 | 189 |
MS.gene26846.t1 | AT4G30170 | 38.111 | 307 | 172 | 9 | 141 | 437 | 27 | 325 | 3.94e-56 | 189 |
MS.gene26846.t1 | AT5G64100 | 39.465 | 299 | 165 | 10 | 146 | 437 | 42 | 331 | 2.00e-51 | 176 |
MS.gene26846.t1 | AT5G24070 | 37.086 | 302 | 166 | 9 | 149 | 437 | 45 | 335 | 1.54e-50 | 174 |
MS.gene26846.t1 | AT3G17070 | 36.093 | 302 | 180 | 8 | 141 | 433 | 38 | 335 | 4.19e-49 | 171 |
MS.gene26846.t1 | AT2G43480 | 35.570 | 298 | 176 | 6 | 149 | 437 | 45 | 335 | 9.25e-49 | 169 |
MS.gene26846.t1 | AT4G37530 | 38.976 | 254 | 142 | 7 | 141 | 384 | 27 | 277 | 1.07e-48 | 168 |
MS.gene26846.t1 | AT5G22410 | 38.255 | 298 | 167 | 11 | 146 | 434 | 33 | 322 | 2.30e-46 | 163 |
MS.gene26846.t1 | AT4G21960 | 31.818 | 308 | 200 | 5 | 135 | 437 | 25 | 327 | 8.24e-45 | 159 |
MS.gene26846.t1 | AT2G37130 | 32.215 | 298 | 191 | 6 | 146 | 437 | 4 | 296 | 5.08e-43 | 153 |
MS.gene26846.t1 | AT2G37130 | 32.013 | 303 | 195 | 6 | 141 | 437 | 30 | 327 | 8.40e-43 | 154 |
MS.gene26846.t1 | AT5G39580 | 43.784 | 185 | 91 | 5 | 131 | 313 | 21 | 194 | 9.79e-39 | 140 |
MS.gene26846.t1 | AT3G17070 | 35.521 | 259 | 155 | 8 | 183 | 433 | 18 | 272 | 1.61e-38 | 140 |
MS.gene26846.t1 | AT4G25980 | 42.262 | 168 | 91 | 4 | 141 | 306 | 71 | 234 | 1.92e-36 | 135 |
MS.gene26846.t1 | AT2G24800 | 43.243 | 185 | 97 | 3 | 141 | 321 | 31 | 211 | 1.03e-35 | 132 |
MS.gene26846.t1 | AT1G55520 | 45.270 | 148 | 39 | 6 | 1 | 112 | 1 | 142 | 2.09e-23 | 97.4 |
MS.gene26846.t1 | AT1G55520 | 45.270 | 148 | 39 | 6 | 1 | 112 | 1 | 142 | 5.25e-23 | 96.7 |
MS.gene26846.t1 | AT1G55520 | 45.270 | 148 | 39 | 6 | 1 | 112 | 1 | 142 | 5.25e-23 | 96.7 |
MS.gene26846.t1 | AT1G55520 | 45.270 | 148 | 39 | 6 | 1 | 112 | 1 | 142 | 5.25e-23 | 96.7 |
MS.gene26846.t1 | AT3G13445 | 43.919 | 148 | 41 | 6 | 1 | 112 | 1 | 142 | 1.83e-22 | 95.1 |
MS.gene26846.t1 | AT3G13445 | 43.919 | 148 | 41 | 6 | 1 | 112 | 1 | 142 | 4.71e-22 | 94.0 |
MS.gene26846.t1 | AT3G42570 | 40.206 | 97 | 57 | 1 | 211 | 306 | 53 | 149 | 3.72e-16 | 75.9 |
MS.gene26846.t1 | AT4G35970 | 27.863 | 262 | 144 | 9 | 163 | 420 | 21 | 241 | 1.78e-14 | 73.9 |
MS.gene26846.t1 | AT4G35970 | 28.509 | 228 | 119 | 8 | 163 | 386 | 21 | 208 | 6.14e-12 | 65.5 |
Find 108 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAGAATTCAATGGTGAAAA+TGG | 0.130261 | 8.1:+8409370 | MS.gene26846:CDS |
TACTATATCAATCTTCTATC+TGG | 0.202571 | 8.1:+8409242 | MS.gene26846:CDS |
AATGGTGAAAATGGGAAGTT+TGG | 0.228237 | 8.1:+8409379 | MS.gene26846:CDS |
AAGATTATGGCCTCTGCTTC+AGG | 0.235474 | 8.1:-8407993 | None:intergenic |
CAACTCTAGAAGGGTGTTTC+CGG | 0.258743 | 8.1:-8405196 | None:intergenic |
TGCTCGAGATTCGGTTCTTC+TGG | 0.259894 | 8.1:+8408643 | MS.gene26846:CDS |
GATCAGCTACACAGAGTTTC+GGG | 0.286160 | 8.1:+8409402 | MS.gene26846:CDS |
ATACTCACCGAACATTGTTT+AGG | 0.303421 | 8.1:-8405232 | None:intergenic |
AGCAATGAAGCAGCCATTCT+TGG | 0.323380 | 8.1:-8408047 | None:intergenic |
CATTCCCATTCACCAAAGTT+TGG | 0.328407 | 8.1:-8409286 | None:intergenic |
TACTCACCGAACATTGTTTA+GGG | 0.328919 | 8.1:-8405231 | None:intergenic |
ACAGATACTGGTAGTCCATT+AGG | 0.332515 | 8.1:+8407945 | MS.gene26846:CDS |
AAATGATTTAATTAATAATT+CGG | 0.341220 | 8.1:-8409442 | None:intergenic |
CCAAACGTGAATTCACTTAG+AGG | 0.356931 | 8.1:+8408536 | MS.gene26846:CDS |
GGATCAGCTACACAGAGTTT+CGG | 0.358303 | 8.1:+8409401 | MS.gene26846:CDS |
TTCCACCCAAGAGAAGATTA+TGG | 0.369466 | 8.1:-8408006 | None:intergenic |
CAAGACATGGTTGCCCTCTC+AGG | 0.394192 | 8.1:+8408922 | MS.gene26846:CDS |
AGCATATCAACAGTTGAGTT+TGG | 0.395459 | 8.1:-8408865 | None:intergenic |
CTGCTTCAGGGCAACTGTAT+TGG | 0.405133 | 8.1:-8407980 | None:intergenic |
CCTCTAAGTGAATTCACGTT+TGG | 0.409135 | 8.1:-8408536 | None:intergenic |
GGTGCCATTGCAACTCTAGA+AGG | 0.410425 | 8.1:-8405206 | None:intergenic |
ACCAACTTGGGAGGTGCAAA+TGG | 0.415053 | 8.1:+8408786 | MS.gene26846:CDS |
TCAACAGTTGAGTTTGGTCC+TGG | 0.417889 | 8.1:-8408859 | None:intergenic |
TTGTGATGCTTCAGTCTTGT+TGG | 0.421974 | 8.1:+8408475 | MS.gene26846:CDS |
CAGAGGCCATAATCTTCTCT+TGG | 0.427153 | 8.1:+8408000 | MS.gene26846:CDS |
GAGCAGATGAAATTTGCCTT+TGG | 0.427954 | 8.1:-8406176 | None:intergenic |
GAGGGTCTTGCGCGTTCCTA+TGG | 0.430640 | 8.1:+8406666 | MS.gene26846:CDS |
TGCGGAAGTTGACATTCATA+TGG | 0.434895 | 8.1:-8406635 | None:intergenic |
CAGATACTGGTAGTCCATTA+GGG | 0.437211 | 8.1:+8407946 | MS.gene26846:CDS |
TCATTGCAACGGTTGTGCTC+AGG | 0.439819 | 8.1:+8409155 | MS.gene26846:CDS |
ATGGTGAAAATGGGAAGTTT+GGG | 0.441266 | 8.1:+8409380 | MS.gene26846:CDS |
TGGTATATGTCAGTCCCTAA+TGG | 0.443724 | 8.1:-8407960 | None:intergenic |
CCAGGTCAAGATGGGCAATT+CGG | 0.447120 | 8.1:-8409193 | None:intergenic |
AGCAACTGCTGCTCGAGATT+CGG | 0.448468 | 8.1:+8408634 | MS.gene26846:CDS |
AGTATAACGGCTAGCAAGGC+AGG | 0.450218 | 8.1:+8408820 | MS.gene26846:CDS |
CCCATTTGCACCTCCCAAGT+TGG | 0.453674 | 8.1:-8408787 | None:intergenic |
AAGAATTCAATGGTGAAAAT+GGG | 0.454353 | 8.1:+8409371 | MS.gene26846:CDS |
CACCTACCCTAAACAATGTT+CGG | 0.456318 | 8.1:+8405225 | MS.gene26846:CDS |
TGATGACTTCAAGAATTCAA+TGG | 0.456785 | 8.1:+8409361 | MS.gene26846:CDS |
GCTTCCATCGGACCAAACTT+TGG | 0.457900 | 8.1:+8409274 | MS.gene26846:CDS |
ACTATATCAATCTTCTATCT+GGG | 0.460341 | 8.1:+8409243 | MS.gene26846:CDS |
CGGACCAAACTTTGGTGAAT+GGG | 0.467364 | 8.1:+8409282 | MS.gene26846:CDS |
TGAATGTCAACTTCCGCAAA+TGG | 0.469943 | 8.1:+8406640 | MS.gene26846:CDS |
CAACCATGTCTTGAAGTGTT+AGG | 0.470663 | 8.1:-8408912 | None:intergenic |
ACAAATTCAGCATTAACATA+TGG | 0.473008 | 8.1:-8409128 | None:intergenic |
GATGACAAAGAAAACTTTGT+TGG | 0.474012 | 8.1:+8408497 | MS.gene26846:CDS |
CAAGACCCTCCAACCATTTG+CGG | 0.475892 | 8.1:-8406653 | None:intergenic |
TTCACCAAAGTTTGGTCCGA+TGG | 0.479920 | 8.1:-8409278 | None:intergenic |
TCGGACCAAACTTTGGTGAA+TGG | 0.479954 | 8.1:+8409281 | MS.gene26846:CDS |
GCAATGAAGCAGCCATTCTT+GGG | 0.480533 | 8.1:-8408046 | None:intergenic |
GCCAACCGGCTGTTGATCTC+CGG | 0.486476 | 8.1:+8405177 | MS.gene26846:CDS |
AGAGGCCATAATCTTCTCTT+GGG | 0.489133 | 8.1:+8408001 | MS.gene26846:CDS |
TATAGTCAGGAGGACCAACT+TGG | 0.489919 | 8.1:+8408773 | MS.gene26846:intron |
GGAGCAAATAACAACATTCC+AGG | 0.495310 | 8.1:+8408841 | MS.gene26846:CDS |
TGCTTCATCTAGTGTAAACT+TGG | 0.500922 | 8.1:+8406689 | MS.gene26846:CDS |
AATGAATTGGCAGTGTAAGT+TGG | 0.502749 | 8.1:+8406109 | MS.gene26846:CDS |
CATTGAGGATTAACCTGAGA+GGG | 0.503055 | 8.1:-8408935 | None:intergenic |
ACCCGTATCATGCAAAAGCT+TGG | 0.511595 | 8.1:+8406468 | MS.gene26846:CDS |
CATTGCAACGGTTGTGCTCA+GGG | 0.517627 | 8.1:+8409156 | MS.gene26846:CDS |
AGAGCTAAATGTTGAGCAGC+GGG | 0.524550 | 8.1:-8409075 | None:intergenic |
AGTTGTACCTCAAATTTAGC+CGG | 0.524671 | 8.1:-8406495 | None:intergenic |
TATTGATTATCAAATGTTGC+TGG | 0.529809 | 8.1:-8409221 | None:intergenic |
TATGGTGGTGATACAGATAC+TGG | 0.534878 | 8.1:+8407933 | MS.gene26846:CDS |
AGATAGTATAACGGCTAGCA+AGG | 0.534920 | 8.1:+8408816 | MS.gene26846:CDS |
TGTACACTGCATTGCGAGCA+CGG | 0.535197 | 8.1:-8406151 | None:intergenic |
AGATTATGGCCTCTGCTTCA+GGG | 0.536832 | 8.1:-8407992 | None:intergenic |
CTGGTGTGACCAGGTCAAGA+TGG | 0.537775 | 8.1:-8409202 | None:intergenic |
AAGTCATCAAAGAAAACAAA+CGG | 0.538400 | 8.1:-8409347 | None:intergenic |
CAACTTCCGCAAATGGTTGG+AGG | 0.539405 | 8.1:+8406647 | MS.gene26846:CDS |
AGAAATGCAAGACAGCCAAC+CGG | 0.541428 | 8.1:+8405163 | MS.gene26846:CDS |
TGTCTCTAGTGACCCAAGAA+TGG | 0.543894 | 8.1:+8408034 | MS.gene26846:CDS |
GAATGGCTGCTTCATTGCTA+AGG | 0.544913 | 8.1:+8408051 | MS.gene26846:CDS |
CCAACTTGGGAGGTGCAAAT+GGG | 0.547215 | 8.1:+8408787 | MS.gene26846:CDS |
TGTCAACTTCCGCAAATGGT+TGG | 0.554296 | 8.1:+8406644 | MS.gene26846:CDS |
ATCAATCTTCTATCTGGGGA+AGG | 0.561435 | 8.1:+8409248 | MS.gene26846:CDS |
AATTTGTATCATCATTGCAA+CGG | 0.563399 | 8.1:+8409144 | MS.gene26846:CDS |
GGCCATAATCTTCTCTTGGG+TGG | 0.566067 | 8.1:+8408004 | MS.gene26846:CDS |
GGGAAGAAAAGATAGTATAA+CGG | 0.572694 | 8.1:+8408807 | MS.gene26846:CDS |
TCCGGAGATCAACAGCCGGT+TGG | 0.573164 | 8.1:-8405178 | None:intergenic |
AACAAACGGATTTGCCACAT+AGG | 0.576451 | 8.1:-8409333 | None:intergenic |
CCGAATTGCCCATCTTGACC+TGG | 0.579994 | 8.1:+8409193 | MS.gene26846:CDS |
AACTTCCGCAAATGGTTGGA+GGG | 0.588576 | 8.1:+8406648 | MS.gene26846:CDS |
CAAATGTTGCTGGTGTGACC+AGG | 0.589108 | 8.1:-8409211 | None:intergenic |
AGTATCTGTATCACCACCAT+AGG | 0.590314 | 8.1:-8407931 | None:intergenic |
CGAAGTAACAGCGTCTCAGA+CGG | 0.597701 | 8.1:+8409104 | MS.gene26846:CDS |
TGGGGAAGGATTGCTTCCAT+CGG | 0.597989 | 8.1:+8409262 | MS.gene26846:CDS |
ATACAGTTGCCCTGAAGCAG+AGG | 0.608869 | 8.1:+8407983 | MS.gene26846:CDS |
ACACCCTTCTAGAGTTGCAA+TGG | 0.610649 | 8.1:+8405202 | MS.gene26846:CDS |
TACACTAGATGAAGCACCAT+AGG | 0.612127 | 8.1:-8406682 | None:intergenic |
ACCATAGGCATCATTCACTC+TGG | 0.612421 | 8.1:-8407916 | None:intergenic |
GTGCCATTGCAACTCTAGAA+GGG | 0.613924 | 8.1:-8405205 | None:intergenic |
CTATATCAATCTTCTATCTG+GGG | 0.624013 | 8.1:+8409244 | MS.gene26846:CDS |
CTCAACTGTTGATATGCTTG+TGG | 0.624335 | 8.1:+8408870 | MS.gene26846:CDS |
TGGTGTGACCAGGTCAAGAT+GGG | 0.634615 | 8.1:-8409201 | None:intergenic |
CAATGCAGTGTACAATCCAA+AGG | 0.634652 | 8.1:+8406160 | MS.gene26846:CDS |
TGTTTCCGGAGATCAACAGC+CGG | 0.637248 | 8.1:-8405182 | None:intergenic |
AGTTTGCTATTATAGTCAGG+AGG | 0.637845 | 8.1:+8408763 | MS.gene26846:intron |
GCCAGAGTGAATGATGCCTA+TGG | 0.638749 | 8.1:+8407915 | MS.gene26846:CDS |
ATAGTCAGGAGGACCAACTT+GGG | 0.642005 | 8.1:+8408774 | MS.gene26846:intron |
ACAGATTGTCGAAACCTATG+TGG | 0.645585 | 8.1:+8409319 | MS.gene26846:CDS |
GAGAGCTAAATGTTGAGCAG+CGG | 0.646471 | 8.1:-8409076 | None:intergenic |
AGGCCTAACACTTCAAGACA+TGG | 0.659410 | 8.1:+8408909 | MS.gene26846:CDS |
GTCAGGAGGACCAACTTGGG+AGG | 0.660262 | 8.1:+8408777 | MS.gene26846:intron |
CCATTGAGGATTAACCTGAG+AGG | 0.679217 | 8.1:-8408936 | None:intergenic |
CACCGAACATTGTTTAGGGT+AGG | 0.690536 | 8.1:-8405227 | None:intergenic |
TCAGCACAAGAAACAGTCTG+TGG | 0.700260 | 8.1:-8408605 | None:intergenic |
GTGGCCAAGTTTGAAAACGT+AGG | 0.712646 | 8.1:+8408889 | MS.gene26846:CDS |
AGAGTGAATGATGCCTATGG+TGG | 0.718785 | 8.1:+8407918 | MS.gene26846:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTATTTTATTTTTTTAAA+TGG | + | chr8.1:8408133-8408152 | MS.gene26846:intron | 0.0% |
!!! | TTTTTTTTTATTTATAAAAA+CGG | - | chr8.1:8408270-8408289 | None:intergenic | 0.0% |
!! | AATTCTTGTTAATAATAATT+TGG | - | chr8.1:8405748-8405767 | None:intergenic | 10.0% |
!! | CATAAAAATAATTTATGATA+TGG | - | chr8.1:8407419-8407438 | None:intergenic | 10.0% |
!! | GAAAATAAAATAAAATAAGA+AGG | - | chr8.1:8408696-8408715 | None:intergenic | 10.0% |
!!! | AGAAAAACTTTTTATTTTTT+TGG | - | chr8.1:8408412-8408431 | None:intergenic | 10.0% |
!! | ATAAAAAAGACAATATATGA+AGG | - | chr8.1:8408119-8408138 | None:intergenic | 15.0% |
!! | ATATTTAATTACCATCAAAT+TGG | + | chr8.1:8405833-8405852 | MS.gene26846:intron | 15.0% |
!! | CACTATTGTATTATATATAT+AGG | - | chr8.1:8407774-8407793 | None:intergenic | 15.0% |
!! | TATTTAATTACCATCAAATT+GGG | + | chr8.1:8405834-8405853 | MS.gene26846:intron | 15.0% |
!! | TGAAAAAAAAAAAGAAGAAA+AGG | - | chr8.1:8406961-8406980 | None:intergenic | 15.0% |
!! | TGATATTAATGTTAATGAAT+TGG | - | chr8.1:8407806-8407825 | None:intergenic | 15.0% |
!! | TTGTATTATATATATAGGAT+AGG | - | chr8.1:8407769-8407788 | None:intergenic | 15.0% |
!!! | ATATTGTTTTAACAATGAAT+TGG | + | chr8.1:8406096-8406115 | MS.gene26846:CDS | 15.0% |
!!! | GTTCATATTTTATATAAAGA+CGG | - | chr8.1:8408313-8408332 | None:intergenic | 15.0% |
!!! | TCTTTGTTTTTCAAAATTTA+CGG | + | chr8.1:8406412-8406431 | MS.gene26846:intron | 15.0% |
!!! | TTATTTTTTCAAATTACTAC+CGG | - | chr8.1:8405333-8405352 | None:intergenic | 15.0% |
!! | AAATCCTAAAGCATAAATAA+AGG | - | chr8.1:8406603-8406622 | None:intergenic | 20.0% |
!! | GTTAGTAATATTATTGTGTT+TGG | + | chr8.1:8407863-8407882 | MS.gene26846:intron | 20.0% |
!! | TACAAATCATACAGTAAATT+CGG | + | chr8.1:8406001-8406020 | MS.gene26846:intron | 20.0% |
!! | TTTCAAATACAAACTTAACA+TGG | - | chr8.1:8406774-8406793 | None:intergenic | 20.0% |
!!! | AATAAACTAATTATTGACTG+AGG | + | chr8.1:8406052-8406071 | MS.gene26846:intron | 20.0% |
!!! | GAGATATAATCTTATTTGTT+GGG | + | chr8.1:8405424-8405443 | MS.gene26846:intron | 20.0% |
!!! | GTAAATTTTGAAAAACAAAG+AGG | - | chr8.1:8406413-8406432 | None:intergenic | 20.0% |
!!! | TAAAAGCATCTATTTGTAAA+AGG | - | chr8.1:8408232-8408251 | None:intergenic | 20.0% |
!!! | TAACAAGAATTCAGTTTTTA+AGG | + | chr8.1:8405757-8405776 | MS.gene26846:intron | 20.0% |
!!! | TGAGATATAATCTTATTTGT+TGG | + | chr8.1:8405423-8405442 | MS.gene26846:intron | 20.0% |
! | AAGAATTCAATGGTGAAAAT+GGG | + | chr8.1:8409371-8409390 | MS.gene26846:CDS | 25.0% |
! | AAGTCATCAAAGAAAACAAA+CGG | - | chr8.1:8409350-8409369 | None:intergenic | 25.0% |
! | ACAAATTCAGCATTAACATA+TGG | - | chr8.1:8409131-8409150 | None:intergenic | 25.0% |
! | ACTATATCAATCTTCTATCT+GGG | + | chr8.1:8409243-8409262 | MS.gene26846:CDS | 25.0% |
! | ATAATTGAATGTAACGTCTT+TGG | + | chr8.1:8405354-8405373 | MS.gene26846:intron | 25.0% |
! | ATGTTAATGAATTGGATTGT+TGG | - | chr8.1:8407798-8407817 | None:intergenic | 25.0% |
! | TAAAGCATAAATAAAGGCAA+AGG | - | chr8.1:8406597-8406616 | None:intergenic | 25.0% |
! | TAATTGAATGTAACGTCTTT+GGG | + | chr8.1:8405355-8405374 | MS.gene26846:intron | 25.0% |
! | TACTATATCAATCTTCTATC+TGG | + | chr8.1:8409242-8409261 | MS.gene26846:CDS | 25.0% |
! | TGTTAATGAATTGGATTGTT+GGG | - | chr8.1:8407797-8407816 | None:intergenic | 25.0% |
! | TTAATTACTACTATGTGACT+CGG | - | chr8.1:8407591-8407610 | None:intergenic | 25.0% |
! | TTCAATTTGTATTCAATGAC+AGG | + | chr8.1:8406814-8406833 | MS.gene26846:intron | 25.0% |
!! | AAAGATTTTTCCCAATTTGA+TGG | - | chr8.1:8405847-8405866 | None:intergenic | 25.0% |
!! | AAGTCTTATAGTGTAAAAGA+TGG | + | chr8.1:8405594-8405613 | MS.gene26846:intron | 25.0% |
!! | ATAATTTTGCAAAAGCTATG+AGG | - | chr8.1:8405946-8405965 | None:intergenic | 25.0% |
!! | GGTTTGGTTAATAGAATATA+GGG | + | chr8.1:8407190-8407209 | MS.gene26846:intron | 25.0% |
!! | TATTGATTATCAAATGTTGC+TGG | - | chr8.1:8409224-8409243 | None:intergenic | 25.0% |
!! | TCATAGCTTTTGCAAAATTA+TGG | + | chr8.1:8405945-8405964 | MS.gene26846:intron | 25.0% |
!! | TTATTTTCTCAAACTACTAC+TGG | - | chr8.1:8405481-8405500 | None:intergenic | 25.0% |
!! | TTTGCCTTTATTTATGCTTT+AGG | + | chr8.1:8406596-8406615 | MS.gene26846:intron | 25.0% |
!! | TTTTAACCATTTGATTCAGT+AGG | + | chr8.1:8407741-8407760 | MS.gene26846:intron | 25.0% |
!! | TTTTCGTGAAATTATTCTGA+TGG | + | chr8.1:8405264-8405283 | MS.gene26846:intron | 25.0% |
!!! | AACTTCATAGTCATTTTTAG+TGG | - | chr8.1:8407846-8407865 | None:intergenic | 25.0% |
!!! | ATTAGTTTGCTATTATAGTC+AGG | + | chr8.1:8408760-8408779 | MS.gene26846:intron | 25.0% |
!!! | TATTTTTTTACCCTCTTTTC+AGG | + | chr8.1:8409032-8409051 | MS.gene26846:intron | 25.0% |
!!! | TGGTTTGGTTAATAGAATAT+AGG | + | chr8.1:8407189-8407208 | MS.gene26846:intron | 25.0% |
!!! | TTATGTTAATTTGTGCTCTA+TGG | - | chr8.1:8405543-8405562 | None:intergenic | 25.0% |
!!! | TTTTAAGGTGTTTGTCTTAT+TGG | + | chr8.1:8405772-8405791 | MS.gene26846:intron | 25.0% |
AAATTGTCAGTACGTTAACA+TGG | - | chr8.1:8408974-8408993 | None:intergenic | 30.0% | |
AATTGAATGTAACGTCTTTG+GGG | + | chr8.1:8405356-8405375 | MS.gene26846:intron | 30.0% | |
ACAGAGTTTAGCATAGTAAA+AGG | + | chr8.1:8405695-8405714 | MS.gene26846:intron | 30.0% | |
ACTTGAATACATTACAGAGA+TGG | - | chr8.1:8406227-8406246 | None:intergenic | 30.0% | |
AGAATCTACAATGAACCAAA+AGG | + | chr8.1:8407663-8407682 | MS.gene26846:intron | 30.0% | |
AGATTACGTTCTTTGAACTT+AGG | - | chr8.1:8407522-8407541 | None:intergenic | 30.0% | |
AGCATCTATTTGTAAAAGGT+AGG | - | chr8.1:8408228-8408247 | None:intergenic | 30.0% | |
AGCTTTACATATTTCGATTG+AGG | - | chr8.1:8407249-8407268 | None:intergenic | 30.0% | |
ATCTATTTGTAAAAGGTAGG+AGG | - | chr8.1:8408225-8408244 | None:intergenic | 30.0% | |
ATGAAATGTGTGTTATGTCT+TGG | + | chr8.1:8408441-8408460 | MS.gene26846:intron | 30.0% | |
CAAGAATTCAATGGTGAAAA+TGG | + | chr8.1:8409370-8409389 | MS.gene26846:CDS | 30.0% | |
CCATGGAGATATTCATAAAT+AGG | - | chr8.1:8406917-8406936 | None:intergenic | 30.0% | |
CCTATTTATGAATATCTCCA+TGG | + | chr8.1:8406914-8406933 | MS.gene26846:intron | 30.0% | |
CGATAATATACATACATAGC+AGG | - | chr8.1:8406331-8406350 | None:intergenic | 30.0% | |
CTATATCAATCTTCTATCTG+GGG | + | chr8.1:8409244-8409263 | MS.gene26846:CDS | 30.0% | |
GATGACAAAGAAAACTTTGT+TGG | + | chr8.1:8408497-8408516 | MS.gene26846:CDS | 30.0% | |
GATTACGTTCTTTGAACTTA+GGG | - | chr8.1:8407521-8407540 | None:intergenic | 30.0% | |
GGGAAGAAAAGATAGTATAA+CGG | + | chr8.1:8408807-8408826 | MS.gene26846:CDS | 30.0% | |
TAGACATAAGAAAGGACAAT+AGG | - | chr8.1:8407111-8407130 | None:intergenic | 30.0% | |
TGATGACTTCAAGAATTCAA+TGG | + | chr8.1:8409361-8409380 | MS.gene26846:CDS | 30.0% | |
TTGTCCTTTCTTATGTCTAA+AGG | + | chr8.1:8407112-8407131 | MS.gene26846:intron | 30.0% | |
TTTCAAATTATCCACTTCAC+TGG | + | chr8.1:8406525-8406544 | MS.gene26846:intron | 30.0% | |
! | CTGTATGATTTGTATCACAA+TGG | - | chr8.1:8405995-8406014 | None:intergenic | 30.0% |
! | GATATGGTTAACTTCACTTT+TGG | + | chr8.1:8407564-8407583 | MS.gene26846:intron | 30.0% |
! | TAGCTTTTGCAAAATTATGG+TGG | + | chr8.1:8405948-8405967 | MS.gene26846:intron | 30.0% |
! | TGCTGCTTATGATATCAAAA+CGG | + | chr8.1:8407630-8407649 | MS.gene26846:intron | 30.0% |
! | TTATTGGCAACATTTTCAAC+AGG | + | chr8.1:8405788-8405807 | MS.gene26846:intron | 30.0% |
!!! | TTGTATCACAATGGTTTTGT+CGG | - | chr8.1:8405986-8406005 | None:intergenic | 30.0% |
AATGAATTGGCAGTGTAAGT+TGG | + | chr8.1:8406109-8406128 | MS.gene26846:CDS | 35.0% | |
AATGGTGAAAATGGGAAGTT+TGG | + | chr8.1:8409379-8409398 | MS.gene26846:CDS | 35.0% | |
ACTCAACTTTAATCGAACCA+TGG | - | chr8.1:8406934-8406953 | None:intergenic | 35.0% | |
AGACATTGACACATTGATAC+CGG | + | chr8.1:8405311-8405330 | MS.gene26846:intron | 35.0% | |
AGCATATCAACAGTTGAGTT+TGG | - | chr8.1:8408868-8408887 | None:intergenic | 35.0% | |
AGGGATTGTAGTGATAATTG+AGG | + | chr8.1:8407209-8407228 | MS.gene26846:intron | 35.0% | |
AGTTGTACCTCAAATTTAGC+CGG | - | chr8.1:8406498-8406517 | None:intergenic | 35.0% | |
ATACTCACCGAACATTGTTT+AGG | - | chr8.1:8405235-8405254 | None:intergenic | 35.0% | |
ATCTACTACCACTGAATTGT+TGG | - | chr8.1:8407547-8407566 | None:intergenic | 35.0% | |
ATGGTGAAAATGGGAAGTTT+GGG | + | chr8.1:8409380-8409399 | MS.gene26846:CDS | 35.0% | |
ATGGTTAAAAGACAGAGTCA+AGG | - | chr8.1:8407731-8407750 | None:intergenic | 35.0% | |
CAAGGATAAGAACTAAGAAG+TGG | - | chr8.1:8407713-8407732 | None:intergenic | 35.0% | |
CAATTCAGTGGTAGTAGATA+TGG | + | chr8.1:8407548-8407567 | MS.gene26846:intron | 35.0% | |
CTAAGCCATTTGTGTTAGAT+TGG | + | chr8.1:8406385-8406404 | MS.gene26846:intron | 35.0% | |
CTCCATCTTTCAAAATTCAC+AGG | - | chr8.1:8405398-8405417 | None:intergenic | 35.0% | |
GATATTCATAAATAGGCCTG+AGG | - | chr8.1:8406910-8406929 | None:intergenic | 35.0% | |
GGACATAACAATTTCCATTG+AGG | - | chr8.1:8408953-8408972 | None:intergenic | 35.0% | |
GGTAGTTGAAATGCATAAAC+AGG | - | chr8.1:8406889-8406908 | None:intergenic | 35.0% | |
TAAGAAGGATCGTAATCCAA+AGG | - | chr8.1:8408681-8408700 | None:intergenic | 35.0% | |
TAATCTTGCCAACAATTCAG+TGG | + | chr8.1:8407536-8407555 | MS.gene26846:intron | 35.0% | |
TACTCACCGAACATTGTTTA+GGG | - | chr8.1:8405234-8405253 | None:intergenic | 35.0% | |
TAGGAACCTACTGAATCAAA+TGG | - | chr8.1:8407750-8407769 | None:intergenic | 35.0% | |
TGCTCCTTTAGACATAAGAA+AGG | - | chr8.1:8407119-8407138 | None:intergenic | 35.0% | |
TGCTTCATCTAGTGTAAACT+TGG | + | chr8.1:8406689-8406708 | MS.gene26846:CDS | 35.0% | |
TTATGCATTTCAACTACCTC+AGG | + | chr8.1:8406891-8406910 | MS.gene26846:intron | 35.0% | |
TTCACGCAACATTGTATGTT+TGG | + | chr8.1:8406977-8406996 | MS.gene26846:intron | 35.0% | |
! | AACCAAGCTTTTGCATGATA+CGG | - | chr8.1:8406473-8406492 | None:intergenic | 35.0% |
! | ATAAAAACGGGTGTTGTAGA+GGG | - | chr8.1:8408257-8408276 | None:intergenic | 35.0% |
! | CATCTTAAGTGTAGTTTGCA+TGG | + | chr8.1:8405625-8405644 | MS.gene26846:intron | 35.0% |
! | TATAAAAACGGGTGTTGTAG+AGG | - | chr8.1:8408258-8408277 | None:intergenic | 35.0% |
!! | AGTTTGCTATTATAGTCAGG+AGG | + | chr8.1:8408763-8408782 | MS.gene26846:intron | 35.0% |
!! | GACCTGTGAATTTTGAAAGA+TGG | + | chr8.1:8405393-8405412 | MS.gene26846:intron | 35.0% |
!! | GTTATGTCTTGGCTTTTACA+GGG | + | chr8.1:8408452-8408471 | MS.gene26846:intron | 35.0% |
!! | TGTTATGTCTTGGCTTTTAC+AGG | + | chr8.1:8408451-8408470 | MS.gene26846:intron | 35.0% |
!!! | AGGAAGGTGTGTTCTTTTTT+TGG | + | chr8.1:8406294-8406313 | MS.gene26846:intron | 35.0% |
!!! | TTTTCAGGTGCACATACAAT+AGG | + | chr8.1:8409047-8409066 | MS.gene26846:intron | 35.0% |
ACAGATACTGGTAGTCCATT+AGG | + | chr8.1:8407945-8407964 | MS.gene26846:CDS | 40.0% | |
ACAGATTGTCGAAACCTATG+TGG | + | chr8.1:8409319-8409338 | MS.gene26846:CDS | 40.0% | |
AGAGGCCATAATCTTCTCTT+GGG | + | chr8.1:8408001-8408020 | MS.gene26846:CDS | 40.0% | |
AGATAGTATAACGGCTAGCA+AGG | + | chr8.1:8408816-8408835 | MS.gene26846:CDS | 40.0% | |
AGGCTCCAATCTAACACAAA+TGG | - | chr8.1:8406393-8406412 | None:intergenic | 40.0% | |
AGTATCTGTATCACCACCAT+AGG | - | chr8.1:8407934-8407953 | None:intergenic | 40.0% | |
ATCAATCTTCTATCTGGGGA+AGG | + | chr8.1:8409248-8409267 | MS.gene26846:CDS | 40.0% | |
ATGAAACAACTCCAGTGAAG+TGG | - | chr8.1:8406539-8406558 | None:intergenic | 40.0% | |
CAATGCAGTGTACAATCCAA+AGG | + | chr8.1:8406160-8406179 | MS.gene26846:CDS | 40.0% | |
CACCTACCCTAAACAATGTT+CGG | + | chr8.1:8405225-8405244 | MS.gene26846:CDS | 40.0% | |
CAGATACTGGTAGTCCATTA+GGG | + | chr8.1:8407946-8407965 | MS.gene26846:CDS | 40.0% | |
CATTCCCATTCACCAAAGTT+TGG | - | chr8.1:8409289-8409308 | None:intergenic | 40.0% | |
CATTGAGGATTAACCTGAGA+GGG | - | chr8.1:8408938-8408957 | None:intergenic | 40.0% | |
CCAAACGTGAATTCACTTAG+AGG | + | chr8.1:8408536-8408555 | MS.gene26846:CDS | 40.0% | |
CCACTTGAAGTTAATTGCAC+TGG | + | chr8.1:8406358-8406377 | MS.gene26846:intron | 40.0% | |
CCAGTGCAATTAACTTCAAG+TGG | - | chr8.1:8406361-8406380 | None:intergenic | 40.0% | |
CCTCTAAGTGAATTCACGTT+TGG | - | chr8.1:8408539-8408558 | None:intergenic | 40.0% | |
CTCAACTGTTGATATGCTTG+TGG | + | chr8.1:8408870-8408889 | MS.gene26846:CDS | 40.0% | |
GAGCAGATGAAATTTGCCTT+TGG | - | chr8.1:8406179-8406198 | None:intergenic | 40.0% | |
GCTGTGCAGTCATAACATAA+GGG | + | chr8.1:8407166-8407185 | MS.gene26846:intron | 40.0% | |
GGAGCAAATAACAACATTCC+AGG | + | chr8.1:8408841-8408860 | MS.gene26846:CDS | 40.0% | |
GTCATAACATAAGGGTGGTT+TGG | + | chr8.1:8407174-8407193 | MS.gene26846:intron | 40.0% | |
GTGCAATTAACTTCAAGTGG+AGG | - | chr8.1:8406358-8406377 | None:intergenic | 40.0% | |
TGAATGTCAACTTCCGCAAA+TGG | + | chr8.1:8406640-8406659 | MS.gene26846:CDS | 40.0% | |
TGCGGAAGTTGACATTCATA+TGG | - | chr8.1:8406638-8406657 | None:intergenic | 40.0% | |
TGCTGTGCAGTCATAACATA+AGG | + | chr8.1:8407165-8407184 | MS.gene26846:intron | 40.0% | |
TGGTATATGTCAGTCCCTAA+TGG | - | chr8.1:8407963-8407982 | None:intergenic | 40.0% | |
TGTATGTGCACCTGAAAAGA+GGG | - | chr8.1:8409045-8409064 | None:intergenic | 40.0% | |
TTCCACCCAAGAGAAGATTA+TGG | - | chr8.1:8408009-8408028 | None:intergenic | 40.0% | |
TTGTATGTGCACCTGAAAAG+AGG | - | chr8.1:8409046-8409065 | None:intergenic | 40.0% | |
TTTCCTTTCCATTAGCAGCA+AGG | + | chr8.1:8406274-8406293 | MS.gene26846:intron | 40.0% | |
TTTGTTGGGTGTGTGTGAAT+TGG | + | chr8.1:8405438-8405457 | MS.gene26846:intron | 40.0% | |
! | AACAAACGGATTTGCCACAT+AGG | - | chr8.1:8409336-8409355 | None:intergenic | 40.0% |
! | ACAATGAACCAAAAGGCACA+TGG | + | chr8.1:8407670-8407689 | MS.gene26846:intron | 40.0% |
! | ACCAAGCTTTTGCATGATAC+GGG | - | chr8.1:8406472-8406491 | None:intergenic | 40.0% |
! | CAACCATGTCTTGAAGTGTT+AGG | - | chr8.1:8408915-8408934 | None:intergenic | 40.0% |
! | TACACTAGATGAAGCACCAT+AGG | - | chr8.1:8406685-8406704 | None:intergenic | 40.0% |
! | TAGGCCTACGTTTTCAAACT+TGG | - | chr8.1:8408896-8408915 | None:intergenic | 40.0% |
! | TATGGTGGTGATACAGATAC+TGG | + | chr8.1:8407933-8407952 | MS.gene26846:CDS | 40.0% |
! | TCTGATGGATCGATGAATCA+CGG | + | chr8.1:8405279-8405298 | MS.gene26846:intron | 40.0% |
! | TGGTTTTCCGGCTAAATTTG+AGG | + | chr8.1:8406488-8406507 | MS.gene26846:CDS | 40.0% |
! | TTGTGATGCTTCAGTCTTGT+TGG | + | chr8.1:8408475-8408494 | MS.gene26846:CDS | 40.0% |
!! | CATGCAAAAGCTTGGTTTTC+CGG | + | chr8.1:8406476-8406495 | MS.gene26846:CDS | 40.0% |
AACTTCCGCAAATGGTTGGA+GGG | + | chr8.1:8406648-8406667 | MS.gene26846:CDS | 45.0% | |
AAGATTATGGCCTCTGCTTC+AGG | - | chr8.1:8407996-8408015 | None:intergenic | 45.0% | |
ACCATAGGCATCATTCACTC+TGG | - | chr8.1:8407919-8407938 | None:intergenic | 45.0% | |
ACCCGTATCATGCAAAAGCT+TGG | + | chr8.1:8406468-8406487 | MS.gene26846:CDS | 45.0% | |
AGAAATGCAAGACAGCCAAC+CGG | + | chr8.1:8405163-8405182 | MS.gene26846:CDS | 45.0% | |
AGAGCTAAATGTTGAGCAGC+GGG | - | chr8.1:8409078-8409097 | None:intergenic | 45.0% | |
AGAGTGAATGATGCCTATGG+TGG | + | chr8.1:8407918-8407937 | MS.gene26846:CDS | 45.0% | |
AGATTATGGCCTCTGCTTCA+GGG | - | chr8.1:8407995-8408014 | None:intergenic | 45.0% | |
AGCAATGAAGCAGCCATTCT+TGG | - | chr8.1:8408050-8408069 | None:intergenic | 45.0% | |
AGGCCTAACACTTCAAGACA+TGG | + | chr8.1:8408909-8408928 | MS.gene26846:CDS | 45.0% | |
ATAGTCAGGAGGACCAACTT+GGG | + | chr8.1:8408774-8408793 | MS.gene26846:intron | 45.0% | |
CAGAGGCCATAATCTTCTCT+TGG | + | chr8.1:8408000-8408019 | MS.gene26846:CDS | 45.0% | |
CAGCGAGTTTCTCAGAATTG+AGG | + | chr8.1:8405892-8405911 | MS.gene26846:intron | 45.0% | |
CCATTGAGGATTAACCTGAG+AGG | - | chr8.1:8408939-8408958 | None:intergenic | 45.0% | |
CCTCTCAGGTTAATCCTCAA+TGG | + | chr8.1:8408936-8408955 | MS.gene26846:intron | 45.0% | |
CGGACCAAACTTTGGTGAAT+GGG | + | chr8.1:8409282-8409301 | MS.gene26846:CDS | 45.0% | |
CTTCCTTGCTGCTAATGGAA+AGG | - | chr8.1:8406280-8406299 | None:intergenic | 45.0% | |
CTTTCCATTAGCAGCAAGGA+AGG | + | chr8.1:8406278-8406297 | MS.gene26846:intron | 45.0% | |
GAATGGCTGCTTCATTGCTA+AGG | + | chr8.1:8408051-8408070 | MS.gene26846:CDS | 45.0% | |
GAGAGCTAAATGTTGAGCAG+CGG | - | chr8.1:8409079-8409098 | None:intergenic | 45.0% | |
GATCAGCTACACAGAGTTTC+GGG | + | chr8.1:8409402-8409421 | MS.gene26846:CDS | 45.0% | |
GCAATGAAGCAGCCATTCTT+GGG | - | chr8.1:8408049-8408068 | None:intergenic | 45.0% | |
GGATCAGCTACACAGAGTTT+CGG | + | chr8.1:8409401-8409420 | MS.gene26846:CDS | 45.0% | |
GTGCAGTCATAACATAAGGG+TGG | + | chr8.1:8407169-8407188 | MS.gene26846:intron | 45.0% | |
GTGGCCAAGTTTGAAAACGT+AGG | + | chr8.1:8408889-8408908 | MS.gene26846:CDS | 45.0% | |
TATAGTCAGGAGGACCAACT+TGG | + | chr8.1:8408773-8408792 | MS.gene26846:intron | 45.0% | |
TCAACAGTTGAGTTTGGTCC+TGG | - | chr8.1:8408862-8408881 | None:intergenic | 45.0% | |
TCAGCACAAGAAACAGTCTG+TGG | - | chr8.1:8408608-8408627 | None:intergenic | 45.0% | |
TCGGACCAAACTTTGGTGAA+TGG | + | chr8.1:8409281-8409300 | MS.gene26846:CDS | 45.0% | |
TGGCTGCAAATGCTGAAATG+AGG | - | chr8.1:8407899-8407918 | None:intergenic | 45.0% | |
TGTCAACTTCCGCAAATGGT+TGG | + | chr8.1:8406644-8406663 | MS.gene26846:CDS | 45.0% | |
TGTCTCTAGTGACCCAAGAA+TGG | + | chr8.1:8408034-8408053 | MS.gene26846:CDS | 45.0% | |
TTCACCAAAGTTTGGTCCGA+TGG | - | chr8.1:8409281-8409300 | None:intergenic | 45.0% | |
TTGGGTGTGTGTGAATTGGT+GGG | + | chr8.1:8405442-8405461 | MS.gene26846:intron | 45.0% | |
! | ACGTAATGCCATGTGCCTTT+TGG | - | chr8.1:8407681-8407700 | None:intergenic | 45.0% |
! | CACCGAACATTGTTTAGGGT+AGG | - | chr8.1:8405230-8405249 | None:intergenic | 45.0% |
! | CTGGTTTGTCATTGCTCCTT+TGG | + | chr8.1:8408662-8408681 | MS.gene26846:intron | 45.0% |
! | GTGCCATTGCAACTCTAGAA+GGG | - | chr8.1:8405208-8405227 | None:intergenic | 45.0% |
!! | ACACCCTTCTAGAGTTGCAA+TGG | + | chr8.1:8405202-8405221 | MS.gene26846:CDS | 45.0% |
!! | CAACTCTAGAAGGGTGTTTC+CGG | - | chr8.1:8405199-8405218 | None:intergenic | 45.0% |
!!! | TTAAATGATTTTTTTTAATA+TGG | + | chr8.1:8408367-8408386 | MS.gene26846:intron | 5.0% |
!!! | TTTTTTTTATTTATAAAAAC+GGG | - | chr8.1:8408269-8408288 | None:intergenic | 5.0% |
AGCAACTGCTGCTCGAGATT+CGG | + | chr8.1:8408634-8408653 | MS.gene26846:CDS | 50.0% | |
AGTATAACGGCTAGCAAGGC+AGG | + | chr8.1:8408820-8408839 | MS.gene26846:CDS | 50.0% | |
ATACAGTTGCCCTGAAGCAG+AGG | + | chr8.1:8407983-8408002 | MS.gene26846:CDS | 50.0% | |
CAAATGTTGCTGGTGTGACC+AGG | - | chr8.1:8409214-8409233 | None:intergenic | 50.0% | |
CAACTTCCGCAAATGGTTGG+AGG | + | chr8.1:8406647-8406666 | MS.gene26846:CDS | 50.0% | |
CAAGACCCTCCAACCATTTG+CGG | - | chr8.1:8406656-8406675 | None:intergenic | 50.0% | |
CACACCTTCCTTGCTGCTAA+TGG | - | chr8.1:8406285-8406304 | None:intergenic | 50.0% | |
CATTGCAACGGTTGTGCTCA+GGG | + | chr8.1:8409156-8409175 | MS.gene26846:CDS | 50.0% | |
CCAGGTCAAGATGGGCAATT+CGG | - | chr8.1:8409196-8409215 | None:intergenic | 50.0% | |
CGAAGTAACAGCGTCTCAGA+CGG | + | chr8.1:8409104-8409123 | MS.gene26846:CDS | 50.0% | |
CTGCTTCAGGGCAACTGTAT+TGG | - | chr8.1:8407983-8408002 | None:intergenic | 50.0% | |
GCCAGAGTGAATGATGCCTA+TGG | + | chr8.1:8407915-8407934 | MS.gene26846:CDS | 50.0% | |
GCTTCCATCGGACCAAACTT+TGG | + | chr8.1:8409274-8409293 | MS.gene26846:CDS | 50.0% | |
GGATCGATGAATCACGGACT+CGG | + | chr8.1:8405285-8405304 | MS.gene26846:intron | 50.0% | |
GGCCATAATCTTCTCTTGGG+TGG | + | chr8.1:8408004-8408023 | MS.gene26846:CDS | 50.0% | |
GTTGGGTGTGTGTGAATTGG+TGG | + | chr8.1:8405441-8405460 | MS.gene26846:intron | 50.0% | |
TCATTGCAACGGTTGTGCTC+AGG | + | chr8.1:8409155-8409174 | MS.gene26846:CDS | 50.0% | |
TGGGGAAGGATTGCTTCCAT+CGG | + | chr8.1:8409262-8409281 | MS.gene26846:CDS | 50.0% | |
TGGTGTGACCAGGTCAAGAT+GGG | - | chr8.1:8409204-8409223 | None:intergenic | 50.0% | |
TGTACACTGCATTGCGAGCA+CGG | - | chr8.1:8406154-8406173 | None:intergenic | 50.0% | |
TGTTTCCGGAGATCAACAGC+CGG | - | chr8.1:8405185-8405204 | None:intergenic | 50.0% | |
! | ACCAACTTGGGAGGTGCAAA+TGG | + | chr8.1:8408786-8408805 | MS.gene26846:CDS | 50.0% |
! | CCAACTTGGGAGGTGCAAAT+GGG | + | chr8.1:8408787-8408806 | MS.gene26846:CDS | 50.0% |
! | TGCTCGAGATTCGGTTCTTC+TGG | + | chr8.1:8408643-8408662 | MS.gene26846:CDS | 50.0% |
!! | GGTGCCATTGCAACTCTAGA+AGG | - | chr8.1:8405209-8405228 | None:intergenic | 50.0% |
CAAGACATGGTTGCCCTCTC+AGG | + | chr8.1:8408922-8408941 | MS.gene26846:CDS | 55.0% | |
CCCATTTGCACCTCCCAAGT+TGG | - | chr8.1:8408790-8408809 | None:intergenic | 55.0% | |
CCGAATTGCCCATCTTGACC+TGG | + | chr8.1:8409193-8409212 | MS.gene26846:CDS | 55.0% | |
CTGGTGTGACCAGGTCAAGA+TGG | - | chr8.1:8409205-8409224 | None:intergenic | 55.0% | |
GAGGGTCTTGCGCGTTCCTA+TGG | + | chr8.1:8406666-8406685 | MS.gene26846:CDS | 60.0% | |
GCCAACCGGCTGTTGATCTC+CGG | + | chr8.1:8405177-8405196 | MS.gene26846:CDS | 60.0% | |
GTCAGGAGGACCAACTTGGG+AGG | + | chr8.1:8408777-8408796 | MS.gene26846:intron | 60.0% | |
TCCGGAGATCAACAGCCGGT+TGG | - | chr8.1:8405181-8405200 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 8405152 | 8409457 | 8405152 | ID=MS.gene26846 |
chr8.1 | mRNA | 8405152 | 8409457 | 8405152 | ID=MS.gene26846.t1;Parent=MS.gene26846 |
chr8.1 | exon | 8405152 | 8405246 | 8405152 | ID=MS.gene26846.t1.exon1;Parent=MS.gene26846.t1 |
chr8.1 | CDS | 8405152 | 8405246 | 8405152 | ID=cds.MS.gene26846.t1;Parent=MS.gene26846.t1 |
chr8.1 | exon | 8406094 | 8406205 | 8406094 | ID=MS.gene26846.t1.exon2;Parent=MS.gene26846.t1 |
chr8.1 | CDS | 8406094 | 8406205 | 8406094 | ID=cds.MS.gene26846.t1;Parent=MS.gene26846.t1 |
chr8.1 | exon | 8406465 | 8406509 | 8406465 | ID=MS.gene26846.t1.exon3;Parent=MS.gene26846.t1 |
chr8.1 | CDS | 8406465 | 8406509 | 8406465 | ID=cds.MS.gene26846.t1;Parent=MS.gene26846.t1 |
chr8.1 | exon | 8406618 | 8406729 | 8406618 | ID=MS.gene26846.t1.exon4;Parent=MS.gene26846.t1 |
chr8.1 | CDS | 8406618 | 8406729 | 8406618 | ID=cds.MS.gene26846.t1;Parent=MS.gene26846.t1 |
chr8.1 | exon | 8407907 | 8408094 | 8407907 | ID=MS.gene26846.t1.exon5;Parent=MS.gene26846.t1 |
chr8.1 | CDS | 8407907 | 8408094 | 8407907 | ID=cds.MS.gene26846.t1;Parent=MS.gene26846.t1 |
chr8.1 | exon | 8408473 | 8408664 | 8408473 | ID=MS.gene26846.t1.exon6;Parent=MS.gene26846.t1 |
chr8.1 | CDS | 8408473 | 8408664 | 8408473 | ID=cds.MS.gene26846.t1;Parent=MS.gene26846.t1 |
chr8.1 | exon | 8408778 | 8408943 | 8408778 | ID=MS.gene26846.t1.exon7;Parent=MS.gene26846.t1 |
chr8.1 | CDS | 8408778 | 8408943 | 8408778 | ID=cds.MS.gene26846.t1;Parent=MS.gene26846.t1 |
chr8.1 | exon | 8409054 | 8409457 | 8409054 | ID=MS.gene26846.t1.exon8;Parent=MS.gene26846.t1 |
chr8.1 | CDS | 8409054 | 8409457 | 8409054 | ID=cds.MS.gene26846.t1;Parent=MS.gene26846.t1 |
Gene Sequence |
Protein sequence |