AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene27610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene27610.t1 MTR_7g075840 99.045 628 6 0 6 633 40 667 0.0 1297
MS.gene27610.t1 MTR_8g033360 82.462 593 100 3 6 594 5 597 0.0 1014
MS.gene27610.t1 MTR_3g107930 59.802 607 227 5 39 628 57 663 0.0 733
MS.gene27610.t1 MTR_3g107930 66.031 524 176 1 107 628 63 586 0.0 731
MS.gene27610.t1 MTR_2g027740 59.961 512 200 3 118 629 160 666 0.0 656
MS.gene27610.t1 MTR_8g092000 58.547 468 189 1 163 630 118 580 0.0 597
MS.gene27610.t1 MTR_2g015550 48.069 466 233 5 169 628 70 532 7.83e-163 477
MS.gene27610.t1 MTR_7g055600 57.421 411 169 4 223 629 25 433 1.23e-159 465
MS.gene27610.t1 MTR_7g057530 57.421 411 169 4 223 629 25 433 1.23e-159 465
MS.gene27610.t1 MTR_4g109890 46.667 495 245 7 144 629 51 535 4.22e-158 465
MS.gene27610.t1 MTR_2g461670 47.312 465 237 5 169 628 128 589 3.09e-156 462
MS.gene27610.t1 MTR_7g096160 47.186 462 216 3 170 628 216 652 7.95e-154 458
MS.gene27610.t1 MTR_6g016380 48.408 471 223 8 178 629 85 554 1.34e-147 439
MS.gene27610.t1 MTR_2g006790 42.918 466 233 6 169 628 70 508 2.63e-134 403
MS.gene27610.t1 MTR_1g070490 42.251 471 240 7 165 630 156 599 1.68e-125 384
MS.gene27610.t1 MTR_2g082650 41.951 410 219 5 238 628 1 410 1.65e-115 351
MS.gene27610.t1 MTR_7g012370 42.623 427 209 8 215 617 110 524 1.54e-114 354
MS.gene27610.t1 MTR_2g082650 41.346 416 225 5 232 628 124 539 3.88e-114 352
MS.gene27610.t1 MTR_6g013840 44.365 417 213 5 233 630 116 532 2.32e-112 347
MS.gene27610.t1 MTR_4g133570 40.874 389 211 4 259 628 74 462 2.29e-104 324
MS.gene27610.t1 MTR_3g452360 38.462 442 236 11 209 628 101 528 6.12e-95 302
MS.gene27610.t1 MTR_3g452360 39.426 383 210 7 263 628 2 379 3.37e-92 290
MS.gene27610.t1 MTR_7g074680 34.440 482 286 6 156 628 103 563 2.60e-84 275
MS.gene27610.t1 MTR_7g074680 34.440 482 286 6 156 628 143 603 9.91e-84 275
MS.gene27610.t1 MTR_7g074680 34.440 482 286 6 156 628 163 623 1.46e-83 275
MS.gene27610.t1 MTR_7g074680 34.440 482 286 6 156 628 163 623 1.54e-83 275
MS.gene27610.t1 MTR_7g074680 34.440 482 286 6 156 628 183 643 1.75e-83 275
MS.gene27610.t1 MTR_7g012370 42.025 326 162 6 233 536 121 441 1.56e-81 265
MS.gene27610.t1 MTR_7g074680 33.267 499 286 7 156 628 183 660 4.31e-80 266
MS.gene27610.t1 MTR_4g133942 57.000 200 56 3 432 628 160 332 5.23e-68 225
MS.gene27610.t1 MTR_4g133942 46.667 75 35 1 171 245 61 130 2.57e-11 65.9
MS.gene27610.t1 MTR_6g008900 24.776 335 201 12 307 620 64 368 1.37e-20 94.4
MS.gene27610.t1 MTR_4g071620 24.776 335 201 12 307 620 64 368 1.37e-20 94.4
MS.gene27610.t1 MTR_4g118030 26.800 250 148 7 388 603 72 320 1.59e-19 90.9
MS.gene27610.t1 MTR_7g109210 29.231 195 130 4 434 620 159 353 1.67e-19 90.9
MS.gene27610.t1 MTR_7g094230 29.714 175 118 3 434 603 151 325 1.68e-19 90.9
MS.gene27610.t1 MTR_3g092310 29.648 199 124 5 434 620 140 334 3.89e-19 89.7
MS.gene27610.t1 MTR_3g111600 26.768 198 136 5 434 622 80 277 2.75e-17 83.2
MS.gene27610.t1 MTR_5g036580 24.545 330 202 12 304 618 62 359 4.56e-17 84.0
MS.gene27610.t1 MTR_8g078240 27.461 193 129 5 434 615 142 334 9.67e-17 82.4
MS.gene27610.t1 MTR_1g021855 28.141 199 133 5 434 622 165 363 1.35e-16 82.4
MS.gene27610.t1 MTR_5g019220 27.778 198 134 5 434 622 166 363 5.97e-15 77.4
MS.gene27610.t1 MTR_1g089820 29.143 175 119 3 434 603 154 328 9.49e-14 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene27610.t1 AT3G61130 75.517 629 151 3 4 630 46 673 0.0 1000
MS.gene27610.t1 AT4G38270 63.208 530 189 2 107 630 147 676 0.0 725
MS.gene27610.t1 AT4G38270 63.208 530 189 2 107 630 151 680 0.0 725
MS.gene27610.t1 AT2G46480 60.377 530 203 4 104 630 15 540 0.0 672
MS.gene27610.t1 AT2G46480 60.377 530 203 4 104 630 28 553 0.0 672
MS.gene27610.t1 AT5G47780 64.270 459 162 1 171 629 159 615 0.0 650
MS.gene27610.t1 AT2G46480 56.981 530 196 5 104 630 15 515 0.0 617
MS.gene27610.t1 AT2G46480 56.981 530 196 5 104 630 28 528 0.0 617
MS.gene27610.t1 AT3G25140 55.632 435 176 7 208 629 128 558 1.06e-168 493
MS.gene27610.t1 AT1G18580 48.614 469 229 4 166 626 70 534 4.21e-164 481
MS.gene27610.t1 AT2G20810 47.957 465 231 7 172 628 74 535 4.84e-152 449
MS.gene27610.t1 AT3G02350 52.174 437 201 5 200 629 125 560 9.44e-150 444
MS.gene27610.t1 AT2G30575 44.397 464 231 3 170 630 171 610 4.44e-144 432
MS.gene27610.t1 AT1G06780 44.372 462 231 2 170 628 149 587 1.85e-140 422
MS.gene27610.t1 AT1G06780 44.372 462 231 2 170 628 162 600 3.29e-140 422
MS.gene27610.t1 AT3G01040 45.215 418 210 5 232 630 115 532 4.11e-119 365
MS.gene27610.t1 AT3G01040 45.215 418 210 5 232 630 115 532 4.11e-119 365
MS.gene27610.t1 AT5G15470 45.564 417 208 5 233 630 116 532 6.15e-118 362
MS.gene27610.t1 AT5G54690 38.753 449 244 7 199 628 96 532 6.68e-111 343
MS.gene27610.t1 AT3G01040 42.344 418 189 6 232 630 115 499 2.19e-103 323
MS.gene27610.t1 AT2G38650 36.402 478 277 7 156 628 162 617 1.70e-98 314
MS.gene27610.t1 AT2G38650 36.402 478 277 7 156 628 162 617 1.70e-98 314
MS.gene27610.t1 AT3G58790 36.364 462 257 10 197 628 84 538 4.48e-89 287
MS.gene27610.t1 AT3G58790 38.119 404 224 7 247 628 7 406 9.42e-89 282
MS.gene27610.t1 AT2G38650 37.143 385 216 6 156 536 162 524 2.03e-76 253
MS.gene27610.t1 AT3G06260 30.857 175 116 3 434 603 150 324 5.29e-21 95.5
MS.gene27610.t1 AT4G02130 28.205 195 132 4 434 620 150 344 3.00e-20 93.2
MS.gene27610.t1 AT4G02130 28.205 195 132 4 434 620 150 344 3.00e-20 93.2
MS.gene27610.t1 AT4G02130 28.205 195 132 4 434 620 150 344 3.00e-20 93.2
MS.gene27610.t1 AT1G70090 28.571 196 131 5 434 620 169 364 6.79e-19 89.7
MS.gene27610.t1 AT1G70090 28.571 196 131 5 434 620 169 364 6.79e-19 89.7
MS.gene27610.t1 AT3G62660 27.179 195 134 4 434 620 164 358 1.26e-18 88.6
MS.gene27610.t1 AT1G02720 28.718 195 131 4 434 620 165 359 1.35e-18 88.6
MS.gene27610.t1 AT1G02720 28.718 195 131 4 434 620 165 359 1.35e-18 88.6
MS.gene27610.t1 AT3G28340 28.351 194 129 6 432 615 153 346 2.41e-18 87.8
MS.gene27610.t1 AT1G19300 27.778 198 134 5 434 622 150 347 2.27e-17 84.7
MS.gene27610.t1 AT1G24170 23.913 322 192 10 317 620 81 367 2.70e-16 81.6
MS.gene27610.t1 AT3G50760 26.396 197 136 4 432 619 134 330 6.75e-15 77.0
MS.gene27610.t1 AT1G13250 25.424 295 180 9 317 603 56 318 7.65e-13 70.9

Find 145 sgRNAs with CRISPR-Local

Find 242 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTACTGATAAACTAAATTT+TGG 0.147550 7.2:+29993719 MS.gene27610:CDS
CAGCATGTGCTTACCTCTTT+TGG 0.162685 7.2:-29991888 None:intergenic
TCTTGTCTAAGATGTGTTTC+TGG 0.168293 7.2:-29992220 None:intergenic
GTTCCCTATGACTGAGAATT+TGG 0.196098 7.2:+29993386 MS.gene27610:CDS
TCCACAAGTTTATCCGAAAT+TGG 0.201752 7.2:+29993979 MS.gene27610:CDS
GAAATAATCTTTCTGCTTCT+TGG 0.205764 7.2:+29992052 MS.gene27610:CDS
GACAGGGTACTATGGAAATT+AGG 0.250416 7.2:+29994608 MS.gene27610:CDS
TAAGCCGTGTTTGCAGTTCT+TGG 0.267033 7.2:-29992987 None:intergenic
TATGACTGCAAGTTGGTTAT+TGG 0.275774 7.2:+29993198 MS.gene27610:CDS
ATATCACAGGTGGCAGAATT+TGG 0.278377 7.2:+29994252 MS.gene27610:CDS
AGAAGGATTTGACTGGATTA+TGG 0.290586 7.2:+29994038 MS.gene27610:CDS
ACCCTTCTGGCTAGCCTTAC+GGG 0.301649 7.2:-29992378 None:intergenic
AAAAGAATCTTATCCAATTT+CGG 0.301889 7.2:-29993992 None:intergenic
AAAGAGAGTCAGCGTGCTTT+AGG 0.304821 7.2:+29993009 MS.gene27610:CDS
ATGGTTATACTTGACATATT+TGG 0.307908 7.2:-29994822 None:intergenic
CTGCTTCTTGGAGAGTTGTT+GGG 0.314790 7.2:+29992064 MS.gene27610:CDS
GAGAAGGAAGGAAGATCTTC+AGG 0.324973 7.2:+29992253 MS.gene27610:CDS
CCAGGGCTAATGACATTCTA+TGG 0.326202 7.2:+29994641 MS.gene27610:CDS
TCAGTTGATTCAGCAGTTCT+AGG 0.328896 7.2:+29992832 MS.gene27610:CDS
TCTGCTTCTTGGAGAGTTGT+TGG 0.331359 7.2:+29992063 MS.gene27610:CDS
CACCCTTCTGGCTAGCCTTA+CGG 0.339727 7.2:-29992379 None:intergenic
CCTATTCTCAGACAATGTTT+TGG 0.343893 7.2:+29993434 MS.gene27610:CDS
TGACAAAGTATCGTCCTTAC+TGG 0.346721 7.2:+29994798 MS.gene27610:CDS
CAAAACATTGTCTGAGAATA+GGG 0.349585 7.2:-29993433 None:intergenic
AATGGGCCAAGTTCTTTCTA+AGG 0.354321 7.2:+29993161 MS.gene27610:CDS
TCATGGCATGTACTCGGTTT+GGG 0.356589 7.2:+29994686 MS.gene27610:CDS
ATCATGGCATGTACTCGGTT+TGG 0.363039 7.2:+29994685 MS.gene27610:CDS
TGCCTTCTGTTCTCTCCATT+TGG 0.363246 7.2:-29991841 None:intergenic
TATGTCCAGCACGAATGATA+TGG 0.364399 7.2:+29992005 MS.gene27610:CDS
AAGAAGCAGAAAGATTATTT+CGG 0.364907 7.2:-29992050 None:intergenic
AGTATAACCATCCTTATCTT+AGG 0.371790 7.2:+29994834 MS.gene27610:CDS
CTTGTCTAAGATGTGTTTCT+GGG 0.373678 7.2:-29992219 None:intergenic
TTAACCAAATTCTCAGTCAT+AGG 0.376964 7.2:-29993390 None:intergenic
CCAAAACATTGTCTGAGAAT+AGG 0.379751 7.2:-29993434 None:intergenic
TTCTAGGTAAATACAACCTT+TGG 0.386455 7.2:+29992848 MS.gene27610:CDS
CTTTCGCCTTAGAAAGAACT+TGG 0.387580 7.2:-29993167 None:intergenic
TGGGAGGAGGTAGTAATCTA+TGG 0.391808 7.2:-29993349 None:intergenic
AGTTGGTTATTGGGAAAGTA+AGG 0.391814 7.2:+29993208 MS.gene27610:CDS
ATGACTGCAAGTTGGTTATT+GGG 0.393638 7.2:+29993199 MS.gene27610:CDS
AAGAATGATGCTCACCCTTC+TGG 0.396798 7.2:-29992391 None:intergenic
ACAGGGTACTATGGAAATTA+GGG 0.397082 7.2:+29994609 MS.gene27610:CDS
AATGAACATGTTTGATTTGA+AGG 0.399962 7.2:+29994201 MS.gene27610:CDS
GTCATTGCTATCTCTAACCA+TGG 0.402027 7.2:-29994779 None:intergenic
GCAGCAGTTGTACACTATAA+TGG 0.404766 7.2:+29994746 MS.gene27610:CDS
ACTGCTGATGAGCAGGTTAG+AGG 0.405243 7.2:+29993243 MS.gene27610:CDS
GGCTGCTGAGTTGGTACAAC+AGG 0.408103 7.2:+29992759 MS.gene27610:CDS
AATGAAAGAGTATTATTTCA+AGG 0.412072 7.2:+29993868 MS.gene27610:CDS
TTGAGCATTGAAAGATACTT+TGG 0.416508 7.2:-29993938 None:intergenic
AGAATGAAGACAGGGTACTA+TGG 0.423957 7.2:+29994600 MS.gene27610:intron
ATAATCCAGTCAAATCCTTC+TGG 0.433499 7.2:-29994036 None:intergenic
GACTTCAAACGCAACAAATC+AGG 0.442440 7.2:+29992092 MS.gene27610:CDS
AGCTTACAGTTCCTAAGATA+AGG 0.446048 7.2:-29994845 None:intergenic
TGATCCCAATGCTTGTGGTT+GGG 0.448672 7.2:+29994171 MS.gene27610:CDS
GATTCAAGCTGTCTCAAGAC+TGG 0.449905 7.2:-29993839 None:intergenic
AGTTAAGATATTTGTCGAAT+CGG 0.454272 7.2:-29994120 None:intergenic
GATAAGCAGTGAATTCCATT+TGG 0.456313 7.2:-29993315 None:intergenic
GATGCGAGATCAGATCATTA+TGG 0.457993 7.2:+29992915 MS.gene27610:CDS
ACATGCCATGATTTATTTAG+CGG 0.458664 7.2:-29994674 None:intergenic
AATTCCATTTGGTATGGTCT+TGG 0.460571 7.2:-29993304 None:intergenic
CTCCGATGTTACAAGCCAAC+AGG 0.462187 7.2:+29991719 MS.gene27610:CDS
AATGCTTGTGGTTGGGCATA+CGG 0.463683 7.2:+29994178 MS.gene27610:CDS
AGGTGAAACACATGCTTTGA+AGG 0.468782 7.2:-29993695 None:intergenic
ATGTCCAGCACGAATGATAT+GGG 0.468872 7.2:+29992006 MS.gene27610:CDS
TTGACATATTTGGTCCAGTA+AGG 0.471463 7.2:-29994812 None:intergenic
AAAGAGTATTATTTCAAGGC+AGG 0.473099 7.2:+29993872 MS.gene27610:CDS
TAGGTAAATACAACCTTTGG+AGG 0.475012 7.2:+29992851 MS.gene27610:CDS
AGAGAAAAGGATGGCAAAGC+GGG 0.478274 7.2:+29992738 MS.gene27610:CDS
TGCAGCAATTAATAGAGAAA+AGG 0.478481 7.2:+29992725 MS.gene27610:intron
TTATGGAATGTGGATCTTCA+TGG 0.483883 7.2:+29994055 MS.gene27610:CDS
TCCAATTTCGGATAAACTTG+TGG 0.484620 7.2:-29993980 None:intergenic
GATCTTCATGGAAAAGTTAA+CGG 0.487784 7.2:+29994067 MS.gene27610:CDS
CACATCCGCTAAATAAATCA+TGG 0.490767 7.2:+29994669 MS.gene27610:CDS
TTTGATTTCAGAATGAAGAC+AGG 0.492079 7.2:+29994591 MS.gene27610:intron
GGCAAAGCGGGCTGCTGAGT+TGG 0.492938 7.2:+29992750 MS.gene27610:CDS
GCTACAAACTGCTGATGAGC+AGG 0.495112 7.2:+29993236 MS.gene27610:CDS
TCTTGGCAGCCAACTGACTA+AGG 0.499672 7.2:-29993287 None:intergenic
TATGCCCAACCACAAGCATT+GGG 0.502397 7.2:-29994175 None:intergenic
CCATAGAATGTCATTAGCCC+TGG 0.504949 7.2:-29994641 None:intergenic
TAGGGCATAATGATAAAGAC+TGG 0.506359 7.2:-29993415 None:intergenic
TCTTAGACAAGAAGTTCAAA+AGG 0.513227 7.2:+29992231 MS.gene27610:CDS
GCAGGCCACCCATCCACTAC+TGG 0.513960 7.2:+29993890 MS.gene27610:CDS
ACATAGATTGTAGCTTTACC+AGG 0.515583 7.2:-29993773 None:intergenic
CTTGTGGAAGATAGAACCTC+AGG 0.518942 7.2:-29993964 None:intergenic
AAAATGTTGATGAATTTAAG+TGG 0.519458 7.2:+29993798 MS.gene27610:CDS
TGTAAGCTAAGTGAATGGTC+TGG 0.522229 7.2:+29994860 MS.gene27610:CDS
ATCTCCGTACGATCTATACT+TGG 0.524349 7.2:-29994716 None:intergenic
GTTGTCCAGAAGGATTTGAC+TGG 0.529202 7.2:+29994031 MS.gene27610:CDS
TTGATCCCAATGCTTGTGGT+TGG 0.532084 7.2:+29994170 MS.gene27610:CDS
GCAGTGAATTCCATTTGGTA+TGG 0.537356 7.2:-29993310 None:intergenic
AGGCCCCATATCATTCGTGC+TGG 0.538645 7.2:-29992010 None:intergenic
GTATGCCCAACCACAAGCAT+TGG 0.539148 7.2:-29994176 None:intergenic
CAGTCCAAGTATAGATCGTA+CGG 0.543562 7.2:+29994712 MS.gene27610:CDS
AAGCACATTCCTTAGTCAGT+TGG 0.552027 7.2:+29993278 MS.gene27610:CDS
GCTGCCAAGACCATACCAAA+TGG 0.554333 7.2:+29993300 MS.gene27610:CDS
AACTTTGATCCCAATGCTTG+TGG 0.555666 7.2:+29994166 MS.gene27610:CDS
AGAATGCTGATTCTACCGTT+CGG 0.555890 7.2:+29992890 MS.gene27610:CDS
AGATCAGATCATTATGGCTA+GGG 0.557672 7.2:+29992921 MS.gene27610:CDS
GGAGGTAGTAATCTATGGTA+AGG 0.557714 7.2:-29993344 None:intergenic
ACATTACTGGCATATATCAC+AGG 0.557897 7.2:+29994239 MS.gene27610:CDS
TAACCAAATTCTCAGTCATA+GGG 0.564966 7.2:-29993389 None:intergenic
ACAAGAAGTTCAAAAGGAGA+AGG 0.565190 7.2:+29992237 MS.gene27610:CDS
TCCCGTAAGGCTAGCCAGAA+GGG 0.568105 7.2:+29992377 MS.gene27610:CDS
GAGATCAGATCATTATGGCT+AGG 0.570674 7.2:+29992920 MS.gene27610:CDS
GTCCCGTAAGGCTAGCCAGA+AGG 0.574160 7.2:+29992376 MS.gene27610:CDS
AAATTAGGGACATTACCTCC+AGG 0.574173 7.2:+29994623 MS.gene27610:CDS
ACATGTTTGATTTGAAGGTG+TGG 0.576976 7.2:+29994206 MS.gene27610:CDS
AATAAATCATGGCATGTACT+CGG 0.577057 7.2:+29994680 MS.gene27610:CDS
GGCTGTTGCAGGCTACCAAA+TGG 0.577386 7.2:+29991826 MS.gene27610:intron
TACCTGTTGGCTTGTAACAT+CGG 0.579742 7.2:-29991721 None:intergenic
TTAGAAGCACCAGTAGTGGA+TGG 0.580206 7.2:-29993899 None:intergenic
GAAGTTCAAAAGGAGAAGGA+AGG 0.583365 7.2:+29992241 MS.gene27610:CDS
GAGATTAGAAGCACCAGTAG+TGG 0.588353 7.2:-29993903 None:intergenic
TCAATTGTATGACTGCAAGT+TGG 0.592735 7.2:+29993191 MS.gene27610:CDS
GGAACTGTAAGCTAAGTGAA+TGG 0.593776 7.2:+29994855 MS.gene27610:CDS
TACCAAATGGAGAGAACAGA+AGG 0.593932 7.2:+29991839 MS.gene27610:CDS
CTGATCTCGCATCAACCGAA+CGG 0.595642 7.2:-29992905 None:intergenic
TTTCAATGCTCAACCACCTG+AGG 0.596049 7.2:+29993948 MS.gene27610:CDS
TACAGTTCCTAAGATAAGGA+TGG 0.597078 7.2:-29994841 None:intergenic
ATTCAAGCTGTCTCAAGACT+GGG 0.597835 7.2:-29993838 None:intergenic
TGTACCAAGAACTGCAAACA+CGG 0.602677 7.2:+29992983 MS.gene27610:CDS
AATTTAGTTTATCAGTAACA+AGG 0.603779 7.2:-29993715 None:intergenic
TGATGACATTGTTGTCCAGA+AGG 0.605837 7.2:+29994021 MS.gene27610:CDS
TTTGACTGGATTATGGAATG+TGG 0.606404 7.2:+29994045 MS.gene27610:CDS
ATTGTGCATACCTCTGGTGT+AGG 0.607000 7.2:-29993053 None:intergenic
TAGAAGCACCAGTAGTGGAT+GGG 0.607302 7.2:-29993898 None:intergenic
ATGCAGCAGGTCTTCCTCAG+TGG 0.620368 7.2:+29992346 MS.gene27610:intron
GCAATTAATAGAGAAAAGGA+TGG 0.621349 7.2:+29992729 MS.gene27610:intron
CTCAACTGTTGTGAATGCAA+AGG 0.621934 7.2:+29993476 MS.gene27610:CDS
AAGCACCAGTAGTGGATGGG+TGG 0.630751 7.2:-29993895 None:intergenic
ATAATGGTAATATGAAGCCA+TGG 0.631825 7.2:+29994762 MS.gene27610:CDS
GTTGGTTATTGGGAAAGTAA+GGG 0.635336 7.2:+29993209 MS.gene27610:CDS
GAGTCAGCGTGCTTTAGGTG+AGG 0.637586 7.2:+29993014 MS.gene27610:CDS
TTGATTTCAGAATGAAGACA+GGG 0.646041 7.2:+29994592 MS.gene27610:intron
AGTGGACTGATAGTCCCGTA+AGG 0.647693 7.2:+29992364 MS.gene27610:CDS
AGGGCATAATGATAAAGACT+GGG 0.655474 7.2:-29993414 None:intergenic
TAGAATGTCATTAGCCCTGG+AGG 0.657306 7.2:-29994638 None:intergenic
AATTAGGGACATTACCTCCA+GGG 0.657912 7.2:+29994624 MS.gene27610:CDS
TAGAGAAAAGGATGGCAAAG+CGG 0.669580 7.2:+29992737 MS.gene27610:CDS
TAGATTGTAGCTTTACCAGG+AGG 0.679016 7.2:-29993770 None:intergenic
TGTCCAGCACGAATGATATG+GGG 0.682822 7.2:+29992007 MS.gene27610:CDS
AACGGTGCAGTTGAAACATG+TGG 0.702671 7.2:+29994085 MS.gene27610:CDS
TTACTGGCATATATCACAGG+TGG 0.707903 7.2:+29994242 MS.gene27610:CDS
GTGGAAGATAGAACCTCAGG+TGG 0.712503 7.2:-29993961 None:intergenic
CTGATGCTGACCTACACCAG+AGG 0.718609 7.2:+29993043 MS.gene27610:CDS
ACGGGACTATCAGTCCACTG+AGG 0.806472 7.2:-29992360 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTTATCAAATAATAGA+TGG - chr7.2:29993616-29993635 None:intergenic 10.0%
!!! ATTAGTTTTAAAATAGAAAT+TGG - chr7.2:29994409-29994428 None:intergenic 10.0%
!! AAATCAAACATGAAAAAAAA+TGG - chr7.2:29994579-29994598 None:intergenic 15.0%
!! TAGCATTCTAATAATATAAT+TGG + chr7.2:29991609-29991628 MS.gene27610:intron 15.0%
!! TTAATGAAAAATTAATGAGA+AGG - chr7.2:29992327-29992346 None:intergenic 15.0%
!! TTCACTAAAGATAATTAATT+AGG - chr7.2:29993124-29993143 None:intergenic 15.0%
!! AAAAGAATCTTATCCAATTT+CGG - chr7.2:29993995-29994014 None:intergenic 20.0%
!! AACATAAGTTAATGAATGAA+GGG - chr7.2:29993653-29993672 None:intergenic 20.0%
!! TACAAACACAATTTAGTTAA+TGG - chr7.2:29992452-29992471 None:intergenic 20.0%
!!! AAAATGTTGATGAATTTAAG+TGG + chr7.2:29993798-29993817 MS.gene27610:CDS 20.0%
!!! AATGAAAGAGTATTATTTCA+AGG + chr7.2:29993868-29993887 MS.gene27610:CDS 20.0%
!!! AATTTAGTTTATCAGTAACA+AGG - chr7.2:29993718-29993737 None:intergenic 20.0%
!!! GTTACTGATAAACTAAATTT+TGG + chr7.2:29993719-29993738 MS.gene27610:CDS 20.0%
! AACAACATAGGGTAAAAAAA+TGG - chr7.2:29991806-29991825 None:intergenic 25.0%
! AAGAAGCAGAAAGATTATTT+CGG - chr7.2:29992053-29992072 None:intergenic 25.0%
! ACATGAAAAAATCAAAGCAA+TGG + chr7.2:29993143-29993162 MS.gene27610:CDS 25.0%
! ACATTAAAATCAGTAGCAAT+AGG - chr7.2:29992178-29992197 None:intergenic 25.0%
! AGGTGAAATAAAATAAAGCA+TGG - chr7.2:29992307-29992326 None:intergenic 25.0%
! AGTTAAGATATTTGTCGAAT+CGG - chr7.2:29994123-29994142 None:intergenic 25.0%
! ATGGTTATACTTGACATATT+TGG - chr7.2:29994825-29994844 None:intergenic 25.0%
! CAACATAAGTTAATGAATGA+AGG - chr7.2:29993654-29993673 None:intergenic 25.0%
! CAATAAAAACCACATATTCA+TGG - chr7.2:29993747-29993766 None:intergenic 25.0%
! CATGAAAAAATCAAAGCAAT+GGG + chr7.2:29993144-29993163 MS.gene27610:CDS 25.0%
! GGTGAAATAAAATAAAGCAT+GGG - chr7.2:29992306-29992325 None:intergenic 25.0%
! GTGAAATAAAATAAAGCATG+GGG - chr7.2:29992305-29992324 None:intergenic 25.0%
! TCTAATCAATACCATATTGT+AGG + chr7.2:29991969-29991988 MS.gene27610:intron 25.0%
!! CAAATCCATCATCTTTAAAA+AGG - chr7.2:29993561-29993580 None:intergenic 25.0%
!! CATGCTATTTGTATATGATA+AGG - chr7.2:29992534-29992553 None:intergenic 25.0%
!! TAAATCTCTTTTTCCAAAAG+AGG + chr7.2:29991875-29991894 MS.gene27610:CDS 25.0%
!! TAATTTTTCATTAATGCAGC+AGG + chr7.2:29992333-29992352 MS.gene27610:intron 25.0%
!! TTACATCATGTTTCTATTCT+CGG + chr7.2:29994300-29994319 MS.gene27610:intron 25.0%
!!! AATGAACATGTTTGATTTGA+AGG + chr7.2:29994201-29994220 MS.gene27610:CDS 25.0%
!!! ACAATATGGTATTGATTAGA+AGG - chr7.2:29991969-29991988 None:intergenic 25.0%
!!! ACATTCCTTTTTAAAGATGA+TGG + chr7.2:29993553-29993572 MS.gene27610:intron 25.0%
!!! ATTTTTTTACCCTATGTTGT+TGG + chr7.2:29991805-29991824 MS.gene27610:intron 25.0%
!!! CTTTTGGAAAAAGAGATTTA+AGG - chr7.2:29991875-29991894 None:intergenic 25.0%
!!! TCAAAGTTTTTTGCAATATG+TGG - chr7.2:29994154-29994173 None:intergenic 25.0%
!!! TTATACATTTTCAGGTTCAT+TGG + chr7.2:29991751-29991770 MS.gene27610:intron 25.0%
AACATCAAGAACCTACAATA+TGG - chr7.2:29991983-29992002 None:intergenic 30.0%
AAGTTAATGAATGAAGGGTT+GGG - chr7.2:29993648-29993667 None:intergenic 30.0%
AATAAATCATGGCATGTACT+CGG + chr7.2:29994680-29994699 MS.gene27610:CDS 30.0%
ACATGCCATGATTTATTTAG+CGG - chr7.2:29994677-29994696 None:intergenic 30.0%
AGCCATATTTGTGTTTAAAC+AGG - chr7.2:29991486-29991505 None:intergenic 30.0%
AGTATAACCATCCTTATCTT+AGG + chr7.2:29994834-29994853 MS.gene27610:CDS 30.0%
ATAATGGTAATATGAAGCCA+TGG + chr7.2:29994762-29994781 MS.gene27610:CDS 30.0%
ATCAAGGCTACTATTATTGT+AGG - chr7.2:29992588-29992607 None:intergenic 30.0%
CAAAACATTGTCTGAGAATA+GGG - chr7.2:29993436-29993455 None:intergenic 30.0%
GAAATAATCTTTCTGCTTCT+TGG + chr7.2:29992052-29992071 MS.gene27610:CDS 30.0%
GAGCAAATTGAACATAACAT+CGG + chr7.2:29994276-29994295 MS.gene27610:intron 30.0%
GATCTTCATGGAAAAGTTAA+CGG + chr7.2:29994067-29994086 MS.gene27610:CDS 30.0%
GCAATTAATAGAGAAAAGGA+TGG + chr7.2:29992729-29992748 MS.gene27610:intron 30.0%
GTCCTGTTTAAACACAAATA+TGG + chr7.2:29991481-29991500 MS.gene27610:intron 30.0%
TAACCAAATTCTCAGTCATA+GGG - chr7.2:29993392-29993411 None:intergenic 30.0%
TAAGTTAATGAATGAAGGGT+TGG - chr7.2:29993649-29993668 None:intergenic 30.0%
TCTTAGACAAGAAGTTCAAA+AGG + chr7.2:29992231-29992250 MS.gene27610:CDS 30.0%
TGAAAATATTGTTTGACCTG+TGG + chr7.2:29992626-29992645 MS.gene27610:intron 30.0%
TGCAGCAATTAATAGAGAAA+AGG + chr7.2:29992725-29992744 MS.gene27610:intron 30.0%
TTAACCAAATTCTCAGTCAT+AGG - chr7.2:29993393-29993412 None:intergenic 30.0%
TTCTAGGTAAATACAACCTT+TGG + chr7.2:29992848-29992867 MS.gene27610:CDS 30.0%
TTGATTTCAGAATGAAGACA+GGG + chr7.2:29994592-29994611 MS.gene27610:intron 30.0%
! AGCTCGTTTTATACATTTTC+AGG + chr7.2:29991743-29991762 MS.gene27610:intron 30.0%
! TTTCATTTTCTTTCCTCCAA+AGG - chr7.2:29992867-29992886 None:intergenic 30.0%
! TTTGATTTCAGAATGAAGAC+AGG + chr7.2:29994591-29994610 MS.gene27610:intron 30.0%
!! AAAGAGTATTATTTCAAGGC+AGG + chr7.2:29993872-29993891 MS.gene27610:CDS 30.0%
!! ATGGTATTGATTAGAAGGTT+GGG - chr7.2:29991964-29991983 None:intergenic 30.0%
!! TATGGTATTGATTAGAAGGT+TGG - chr7.2:29991965-29991984 None:intergenic 30.0%
!! TTGAGCATTGAAAGATACTT+TGG - chr7.2:29993941-29993960 None:intergenic 30.0%
!!! ATCCTCATCTTTTGTTGTTA+AGG + chr7.2:29991520-29991539 MS.gene27610:intron 30.0%
AAGCACCACATTAAAAGGTA+TGG - chr7.2:29992490-29992509 None:intergenic 35.0%
AATTCCATTTGGTATGGTCT+TGG - chr7.2:29993307-29993326 None:intergenic 35.0%
ACAAGAAGTTCAAAAGGAGA+AGG + chr7.2:29992237-29992256 MS.gene27610:CDS 35.0%
ACATTACTGGCATATATCAC+AGG + chr7.2:29994239-29994258 MS.gene27610:CDS 35.0%
AGAAGGATTTGACTGGATTA+TGG + chr7.2:29994038-29994057 MS.gene27610:CDS 35.0%
AGATCAGATCATTATGGCTA+GGG + chr7.2:29992921-29992940 MS.gene27610:CDS 35.0%
AGCTTACAGTTCCTAAGATA+AGG - chr7.2:29994848-29994867 None:intergenic 35.0%
AGGCTACTATTATTGTAGGT+TGG - chr7.2:29992584-29992603 None:intergenic 35.0%
AGGGCATAATGATAAAGACT+GGG - chr7.2:29993417-29993436 None:intergenic 35.0%
AGTTGGTTATTGGGAAAGTA+AGG + chr7.2:29993208-29993227 MS.gene27610:CDS 35.0%
ATAATCCAGTCAAATCCTTC+TGG - chr7.2:29994039-29994058 None:intergenic 35.0%
ATCACAAGCACCACATTAAA+AGG - chr7.2:29992495-29992514 None:intergenic 35.0%
CACATCCGCTAAATAAATCA+TGG + chr7.2:29994669-29994688 MS.gene27610:CDS 35.0%
CAGAACATCATACTTCATCA+AGG - chr7.2:29992604-29992623 None:intergenic 35.0%
CCAAAACATTGTCTGAGAAT+AGG - chr7.2:29993437-29993456 None:intergenic 35.0%
GATAAGCAGTGAATTCCATT+TGG - chr7.2:29993318-29993337 None:intergenic 35.0%
GCTACTATTATTGTAGGTTG+GGG - chr7.2:29992582-29992601 None:intergenic 35.0%
GGCTACTATTATTGTAGGTT+GGG - chr7.2:29992583-29992602 None:intergenic 35.0%
GTCCTTAACAACAAAAGATG+AGG - chr7.2:29991525-29991544 None:intergenic 35.0%
GTTGGTTATTGGGAAAGTAA+GGG + chr7.2:29993209-29993228 MS.gene27610:CDS 35.0%
TACAGTTCCTAAGATAAGGA+TGG - chr7.2:29994844-29994863 None:intergenic 35.0%
TAGGGCATAATGATAAAGAC+TGG - chr7.2:29993418-29993437 None:intergenic 35.0%
TAGGTAAATACAACCTTTGG+AGG + chr7.2:29992851-29992870 MS.gene27610:CDS 35.0%
TCAATTGTATGACTGCAAGT+TGG + chr7.2:29993191-29993210 MS.gene27610:CDS 35.0%
TCCAATTTCGGATAAACTTG+TGG - chr7.2:29993983-29994002 None:intergenic 35.0%
TCCACAAGTTTATCCGAAAT+TGG + chr7.2:29993979-29993998 MS.gene27610:CDS 35.0%
TGGAAAAAGAAGGACATTAC+TGG + chr7.2:29994226-29994245 MS.gene27610:CDS 35.0%
TTATGGAATGTGGATCTTCA+TGG + chr7.2:29994055-29994074 MS.gene27610:CDS 35.0%
TTGACATATTTGGTCCAGTA+AGG - chr7.2:29994815-29994834 None:intergenic 35.0%
TTTGACTGGATTATGGAATG+TGG + chr7.2:29994045-29994064 MS.gene27610:CDS 35.0%
! ACAGGGTACTATGGAAATTA+GGG + chr7.2:29994609-29994628 MS.gene27610:CDS 35.0%
! ACATAGATTGTAGCTTTACC+AGG - chr7.2:29993776-29993795 None:intergenic 35.0%
! AGCACCACATTAAAAGGTAT+GGG - chr7.2:29992489-29992508 None:intergenic 35.0%
! ATAGGGAACTTTCTCTTTTC+AGG - chr7.2:29993375-29993394 None:intergenic 35.0%
! ATCTCCCATACCTTTTAATG+TGG + chr7.2:29992482-29992501 MS.gene27610:intron 35.0%
! CATGTTTCTATTCTCGGAAT+TGG + chr7.2:29994306-29994325 MS.gene27610:intron 35.0%
! CCTATTCTCAGACAATGTTT+TGG + chr7.2:29993434-29993453 MS.gene27610:CDS 35.0%
! CGGAAATTTTCTAGACTCAA+AGG - chr7.2:29992033-29992052 None:intergenic 35.0%
! CTTGTCTAAGATGTGTTTCT+GGG - chr7.2:29992222-29992241 None:intergenic 35.0%
! GTCTTTTATGATACATGTGC+TGG + chr7.2:29993512-29993531 MS.gene27610:intron 35.0%
! TCTTGTCTAAGATGTGTTTC+TGG - chr7.2:29992223-29992242 None:intergenic 35.0%
! TGGTTTTTATTGAATCCTCC+TGG + chr7.2:29993755-29993774 MS.gene27610:CDS 35.0%
! TTTGAAGGTGTGGAAAAAGA+AGG + chr7.2:29994216-29994235 MS.gene27610:CDS 35.0%
!! AAAGATGATGGATTTGAGCT+TGG + chr7.2:29993565-29993584 MS.gene27610:intron 35.0%
!! ACATGTTTGATTTGAAGGTG+TGG + chr7.2:29994206-29994225 MS.gene27610:CDS 35.0%
!! ATGACTGCAAGTTGGTTATT+GGG + chr7.2:29993199-29993218 MS.gene27610:CDS 35.0%
!! TATGACTGCAAGTTGGTTAT+TGG + chr7.2:29993198-29993217 MS.gene27610:CDS 35.0%
!!! ATTTTGGAGCCATGAATATG+TGG + chr7.2:29993735-29993754 MS.gene27610:CDS 35.0%
AAATTAGGGACATTACCTCC+AGG + chr7.2:29994623-29994642 MS.gene27610:CDS 40.0%
AACCAAGGAATCTAGACTGT+TGG - chr7.2:29994468-29994487 None:intergenic 40.0%
AACTTTGATCCCAATGCTTG+TGG + chr7.2:29994166-29994185 MS.gene27610:CDS 40.0%
AAGCACATTCCTTAGTCAGT+TGG + chr7.2:29993278-29993297 MS.gene27610:CDS 40.0%
AATGGGCCAAGTTCTTTCTA+AGG + chr7.2:29993161-29993180 MS.gene27610:CDS 40.0%
AATTAGGGACATTACCTCCA+GGG + chr7.2:29994624-29994643 MS.gene27610:CDS 40.0%
AGCATGATTCCCTACAGTTA+GGG - chr7.2:29994508-29994527 None:intergenic 40.0%
AGGACAATAATGCCTTTCGA+GGG - chr7.2:29992158-29992177 None:intergenic 40.0%
AGGTGAAACACATGCTTTGA+AGG - chr7.2:29993698-29993717 None:intergenic 40.0%
AGTGTAATGTCCTTGATGTG+AGG + chr7.2:29991571-29991590 MS.gene27610:intron 40.0%
ATAAAGAAAACTCGCTCCAC+AGG - chr7.2:29992645-29992664 None:intergenic 40.0%
ATATCACAGGTGGCAGAATT+TGG + chr7.2:29994252-29994271 MS.gene27610:CDS 40.0%
ATCTCCGTACGATCTATACT+TGG - chr7.2:29994719-29994738 None:intergenic 40.0%
ATGTCCAGCACGAATGATAT+GGG + chr7.2:29992006-29992025 MS.gene27610:CDS 40.0%
ATTCAAGCTGTCTCAAGACT+GGG - chr7.2:29993841-29993860 None:intergenic 40.0%
ATTTCTTCCTCCTCACATCA+AGG - chr7.2:29991584-29991603 None:intergenic 40.0%
CAAACGCAACAAATCAGGTT+AGG + chr7.2:29992097-29992116 MS.gene27610:intron 40.0%
CAGAAAATTGTGCATACCTC+TGG - chr7.2:29993062-29993081 None:intergenic 40.0%
CAGTCCAAGTATAGATCGTA+CGG + chr7.2:29994712-29994731 MS.gene27610:CDS 40.0%
CTCAACTGTTGTGAATGCAA+AGG + chr7.2:29993476-29993495 MS.gene27610:CDS 40.0%
CTTTCGCCTTAGAAAGAACT+TGG - chr7.2:29993170-29993189 None:intergenic 40.0%
GAAGTTCAAAAGGAGAAGGA+AGG + chr7.2:29992241-29992260 MS.gene27610:CDS 40.0%
GACTTCAAACGCAACAAATC+AGG + chr7.2:29992092-29992111 MS.gene27610:CDS 40.0%
GAGATCAGATCATTATGGCT+AGG + chr7.2:29992920-29992939 MS.gene27610:CDS 40.0%
GATGCGAGATCAGATCATTA+TGG + chr7.2:29992915-29992934 MS.gene27610:CDS 40.0%
GCAGCAGTTGTACACTATAA+TGG + chr7.2:29994746-29994765 MS.gene27610:CDS 40.0%
GCAGTGAATTCCATTTGGTA+TGG - chr7.2:29993313-29993332 None:intergenic 40.0%
GGAACTGTAAGCTAAGTGAA+TGG + chr7.2:29994855-29994874 MS.gene27610:CDS 40.0%
GGAGGTAGTAATCTATGGTA+AGG - chr7.2:29993347-29993366 None:intergenic 40.0%
GTATAAAACGAGCTACCTGT+TGG - chr7.2:29991737-29991756 None:intergenic 40.0%
GTCATTGCTATCTCTAACCA+TGG - chr7.2:29994782-29994801 None:intergenic 40.0%
GTTCCCTATGACTGAGAATT+TGG + chr7.2:29993386-29993405 MS.gene27610:CDS 40.0%
GTTGTTGTCTTTGACATTGC+AGG + chr7.2:29993670-29993689 MS.gene27610:intron 40.0%
TACCAAATGGAGAGAACAGA+AGG + chr7.2:29991839-29991858 MS.gene27610:CDS 40.0%
TAGAGAAAAGGATGGCAAAG+CGG + chr7.2:29992737-29992756 MS.gene27610:CDS 40.0%
TAGGACAATAATGCCTTTCG+AGG - chr7.2:29992159-29992178 None:intergenic 40.0%
TATGTCCAGCACGAATGATA+TGG + chr7.2:29992005-29992024 MS.gene27610:CDS 40.0%
TGATGACATTGTTGTCCAGA+AGG + chr7.2:29994021-29994040 MS.gene27610:CDS 40.0%
TGATGTGAGGAGGAAGAAAT+AGG + chr7.2:29991584-29991603 MS.gene27610:intron 40.0%
TGTAAGCTAAGTGAATGGTC+TGG + chr7.2:29994860-29994879 MS.gene27610:CDS 40.0%
TGTACCAAGAACTGCAAACA+CGG + chr7.2:29992983-29993002 MS.gene27610:CDS 40.0%
TTACTGGCATATATCACAGG+TGG + chr7.2:29994242-29994261 MS.gene27610:CDS 40.0%
! AAGTTTGATTTCCCCTCGAA+AGG + chr7.2:29992143-29992162 MS.gene27610:intron 40.0%
! AGAATGAAGACAGGGTACTA+TGG + chr7.2:29994600-29994619 MS.gene27610:intron 40.0%
! GACAGGGTACTATGGAAATT+AGG + chr7.2:29994608-29994627 MS.gene27610:CDS 40.0%
! TAGATTGTAGCTTTACCAGG+AGG - chr7.2:29993773-29993792 None:intergenic 40.0%
! TCAGTTGATTCAGCAGTTCT+AGG + chr7.2:29992832-29992851 MS.gene27610:CDS 40.0%
!! AGAATGCTGATTCTACCGTT+CGG + chr7.2:29992890-29992909 MS.gene27610:CDS 40.0%
!! GTATTGATTAGAAGGTTGGG+AGG - chr7.2:29991961-29991980 None:intergenic 40.0%
!! TACCTGTTGGCTTGTAACAT+CGG - chr7.2:29991724-29991743 None:intergenic 40.0%
!! TGACAAAGTATCGTCCTTAC+TGG + chr7.2:29994798-29994817 MS.gene27610:CDS 40.0%
!!! GGAACTTTCTCTTTTCAGGT+GGG - chr7.2:29993371-29993390 None:intergenic 40.0%
AAAGAGAGTCAGCGTGCTTT+AGG + chr7.2:29993009-29993028 MS.gene27610:CDS 45.0%
AACGGTGCAGTTGAAACATG+TGG + chr7.2:29994085-29994104 MS.gene27610:CDS 45.0%
AAGAATGATGCTCACCCTTC+TGG - chr7.2:29992394-29992413 None:intergenic 45.0%
AATGCTTGTGGTTGGGCATA+CGG + chr7.2:29994178-29994197 MS.gene27610:CDS 45.0%
ACTGTTGCAAGCAAAACACG+TGG - chr7.2:29993593-29993612 None:intergenic 45.0%
AGAAGGGTGAGCATCATTCT+TGG + chr7.2:29992393-29992412 MS.gene27610:intron 45.0%
AGAGAAAAGGATGGCAAAGC+GGG + chr7.2:29992738-29992757 MS.gene27610:CDS 45.0%
AGCCAACAGTCTAGATTCCT+TGG + chr7.2:29994463-29994482 MS.gene27610:intron 45.0%
AGTCTAGATTCCTTGGTTGC+AGG + chr7.2:29994470-29994489 MS.gene27610:intron 45.0%
ATCATGGCATGTACTCGGTT+TGG + chr7.2:29994685-29994704 MS.gene27610:CDS 45.0%
ATTGTGCATACCTCTGGTGT+AGG - chr7.2:29993056-29993075 None:intergenic 45.0%
CAACCACGAATCTCGAATCT+CGG + chr7.2:29994357-29994376 MS.gene27610:intron 45.0%
CCAGGGCTAATGACATTCTA+TGG + chr7.2:29994641-29994660 MS.gene27610:CDS 45.0%
CCATAGAATGTCATTAGCCC+TGG - chr7.2:29994644-29994663 None:intergenic 45.0%
CTGCAACAGCCAACAACATA+GGG - chr7.2:29991817-29991836 None:intergenic 45.0%
CTGCTTCTTGGAGAGTTGTT+GGG + chr7.2:29992064-29992083 MS.gene27610:CDS 45.0%
CTTGTGGAAGATAGAACCTC+AGG - chr7.2:29993967-29993986 None:intergenic 45.0%
GAGAAGGAAGGAAGATCTTC+AGG + chr7.2:29992253-29992272 MS.gene27610:CDS 45.0%
GAGCATGATTCCCTACAGTT+AGG - chr7.2:29994509-29994528 None:intergenic 45.0%
GATTCAAGCTGTCTCAAGAC+TGG - chr7.2:29993842-29993861 None:intergenic 45.0%
GGACAATAATGCCTTTCGAG+GGG - chr7.2:29992157-29992176 None:intergenic 45.0%
GTAATGTCCTTGATGTGAGG+AGG + chr7.2:29991574-29991593 MS.gene27610:intron 45.0%
GTTGTCCAGAAGGATTTGAC+TGG + chr7.2:29994031-29994050 MS.gene27610:CDS 45.0%
TAAGCCGTGTTTGCAGTTCT+TGG - chr7.2:29992990-29993009 None:intergenic 45.0%
TAGAATGTCATTAGCCCTGG+AGG - chr7.2:29994641-29994660 None:intergenic 45.0%
TATGCCCAACCACAAGCATT+GGG - chr7.2:29994178-29994197 None:intergenic 45.0%
TCATGGCATGTACTCGGTTT+GGG + chr7.2:29994686-29994705 MS.gene27610:CDS 45.0%
TCTGCTTCTTGGAGAGTTGT+TGG + chr7.2:29992063-29992082 MS.gene27610:CDS 45.0%
TGATCCCAATGCTTGTGGTT+GGG + chr7.2:29994171-29994190 MS.gene27610:CDS 45.0%
TGCCTTCTGTTCTCTCCATT+TGG - chr7.2:29991844-29991863 None:intergenic 45.0%
TGGGAGGAGGTAGTAATCTA+TGG - chr7.2:29993352-29993371 None:intergenic 45.0%
TGTCCAGCACGAATGATATG+GGG + chr7.2:29992007-29992026 MS.gene27610:CDS 45.0%
TTGATCCCAATGCTTGTGGT+TGG + chr7.2:29994170-29994189 MS.gene27610:CDS 45.0%
TTTCAATGCTCAACCACCTG+AGG + chr7.2:29993948-29993967 MS.gene27610:CDS 45.0%
! CAGCATGTGCTTACCTCTTT+TGG - chr7.2:29991891-29991910 None:intergenic 45.0%
!! GAGATTAGAAGCACCAGTAG+TGG - chr7.2:29993906-29993925 None:intergenic 45.0%
!! GGGAACTTTCTCTTTTCAGG+TGG - chr7.2:29993372-29993391 None:intergenic 45.0%
!! TAGAAGCACCAGTAGTGGAT+GGG - chr7.2:29993901-29993920 None:intergenic 45.0%
!! TTAGAAGCACCAGTAGTGGA+TGG - chr7.2:29993902-29993921 None:intergenic 45.0%
!!! ACTTTCTCTTTTCAGGTGGG+AGG - chr7.2:29993368-29993387 None:intergenic 45.0%
ACTGCTGATGAGCAGGTTAG+AGG + chr7.2:29993243-29993262 MS.gene27610:CDS 50.0%
CCTGCAACAGCCAACAACAT+AGG - chr7.2:29991818-29991837 None:intergenic 50.0%
CTCCGATGTTACAAGCCAAC+AGG + chr7.2:29991719-29991738 MS.gene27610:CDS 50.0%
CTGATCTCGCATCAACCGAA+CGG - chr7.2:29992908-29992927 None:intergenic 50.0%
GAATCTCGAATCTCGGCTGT+TGG + chr7.2:29994364-29994383 MS.gene27610:intron 50.0%
GCTACAAACTGCTGATGAGC+AGG + chr7.2:29993236-29993255 MS.gene27610:CDS 50.0%
GCTGCCAAGACCATACCAAA+TGG + chr7.2:29993300-29993319 MS.gene27610:CDS 50.0%
GTATGCCCAACCACAAGCAT+TGG - chr7.2:29994179-29994198 None:intergenic 50.0%
GTGGAAGATAGAACCTCAGG+TGG - chr7.2:29993964-29993983 None:intergenic 50.0%
GTGTGCTTGCCCTAACTGTA+GGG + chr7.2:29994496-29994515 MS.gene27610:intron 50.0%
TCTTGGCAGCCAACTGACTA+AGG - chr7.2:29993290-29993309 None:intergenic 50.0%
TGGTTGCGTGCAGTACTATG+TGG - chr7.2:29994343-29994362 None:intergenic 50.0%
TGTGTGCTTGCCCTAACTGT+AGG + chr7.2:29994495-29994514 MS.gene27610:intron 50.0%
! ACTGTTGGCTGAGGATCAGA+CGG - chr7.2:29994453-29994472 None:intergenic 50.0%
! CCTATGTTGTTGGCTGTTGC+AGG + chr7.2:29991815-29991834 MS.gene27610:intron 50.0%
! GGAATCTAGACTGTTGGCTG+AGG - chr7.2:29994462-29994481 None:intergenic 50.0%
!! AGTGGACTGATAGTCCCGTA+AGG + chr7.2:29992364-29992383 MS.gene27610:CDS 50.0%
!!! TTCTCTTTTCAGGTGGGAGG+AGG - chr7.2:29993365-29993384 None:intergenic 50.0%
ACGGGACTATCAGTCCACTG+AGG - chr7.2:29992363-29992382 None:intergenic 55.0%
AGCACACAGTCCTGCAACCA+AGG - chr7.2:29994483-29994502 None:intergenic 55.0%
AGGCCCCATATCATTCGTGC+TGG - chr7.2:29992013-29992032 None:intergenic 55.0%
ATGCAGCAGGTCTTCCTCAG+TGG + chr7.2:29992346-29992365 MS.gene27610:intron 55.0%
CAGCCGAGATTCGAGATTCG+TGG - chr7.2:29994363-29994382 None:intergenic 55.0%
CTGATGCTGACCTACACCAG+AGG + chr7.2:29993043-29993062 MS.gene27610:CDS 55.0%
GGCTGTTGCAGGCTACCAAA+TGG + chr7.2:29991826-29991845 MS.gene27610:intron 55.0%
! GAGTCAGCGTGCTTTAGGTG+AGG + chr7.2:29993014-29993033 MS.gene27610:CDS 55.0%
! TCCCGTAAGGCTAGCCAGAA+GGG + chr7.2:29992377-29992396 MS.gene27610:CDS 55.0%
!! AAGCACCAGTAGTGGATGGG+TGG - chr7.2:29993898-29993917 None:intergenic 55.0%
!! ACCCTTCTGGCTAGCCTTAC+GGG - chr7.2:29992381-29992400 None:intergenic 55.0%
!! CACCCTTCTGGCTAGCCTTA+CGG - chr7.2:29992382-29992401 None:intergenic 55.0%
!! GGCTGCTGAGTTGGTACAAC+AGG + chr7.2:29992759-29992778 MS.gene27610:CDS 55.0%
! GTCCCGTAAGGCTAGCCAGA+AGG + chr7.2:29992376-29992395 MS.gene27610:CDS 60.0%
GCAGGCCACCCATCCACTAC+TGG + chr7.2:29993890-29993909 MS.gene27610:CDS 65.0%
!! GGCAAAGCGGGCTGCTGAGT+TGG + chr7.2:29992750-29992769 MS.gene27610:CDS 65.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 29991454 29994886 29991454 ID=MS.gene27610
chr7.2 mRNA 29991454 29994886 29991454 ID=MS.gene27610.t1;Parent=MS.gene27610
chr7.2 exon 29991454 29991469 29991454 ID=MS.gene27610.t1.exon1;Parent=MS.gene27610.t1
chr7.2 CDS 29991454 29991469 29991454 ID=cds.MS.gene27610.t1;Parent=MS.gene27610.t1
chr7.2 exon 29991706 29991740 29991706 ID=MS.gene27610.t1.exon2;Parent=MS.gene27610.t1
chr7.2 CDS 29991706 29991740 29991706 ID=cds.MS.gene27610.t1;Parent=MS.gene27610.t1
chr7.2 exon 29991837 29991896 29991837 ID=MS.gene27610.t1.exon3;Parent=MS.gene27610.t1
chr7.2 CDS 29991837 29991896 29991837 ID=cds.MS.gene27610.t1;Parent=MS.gene27610.t1
chr7.2 exon 29991991 29992113 29991991 ID=MS.gene27610.t1.exon4;Parent=MS.gene27610.t1
chr7.2 CDS 29991991 29992113 29991991 ID=cds.MS.gene27610.t1;Parent=MS.gene27610.t1
chr7.2 exon 29992211 29992274 29992211 ID=MS.gene27610.t1.exon5;Parent=MS.gene27610.t1
chr7.2 CDS 29992211 29992274 29992211 ID=cds.MS.gene27610.t1;Parent=MS.gene27610.t1
chr7.2 exon 29992355 29992398 29992355 ID=MS.gene27610.t1.exon6;Parent=MS.gene27610.t1
chr7.2 CDS 29992355 29992398 29992355 ID=cds.MS.gene27610.t1;Parent=MS.gene27610.t1
chr7.2 exon 29992730 29993064 29992730 ID=MS.gene27610.t1.exon7;Parent=MS.gene27610.t1
chr7.2 CDS 29992730 29993064 29992730 ID=cds.MS.gene27610.t1;Parent=MS.gene27610.t1
chr7.2 exon 29993140 29993497 29993140 ID=MS.gene27610.t1.exon8;Parent=MS.gene27610.t1
chr7.2 CDS 29993140 29993497 29993140 ID=cds.MS.gene27610.t1;Parent=MS.gene27610.t1
chr7.2 exon 29993692 29994273 29993692 ID=MS.gene27610.t1.exon9;Parent=MS.gene27610.t1
chr7.2 CDS 29993692 29994273 29993692 ID=cds.MS.gene27610.t1;Parent=MS.gene27610.t1
chr7.2 exon 29994602 29994886 29994602 ID=MS.gene27610.t1.exon10;Parent=MS.gene27610.t1
chr7.2 CDS 29994602 29994886 29994602 ID=cds.MS.gene27610.t1;Parent=MS.gene27610.t1
Gene Sequence

>MS.gene27610

ATGGATGCTCTAGAAAGTATTGATCTTGTCCTGTTTAAACACAAATATGGCTCAGTTTGTTTGTGAATCCTCATCTTTTGTTGTTAAGGACTTTTAATTATGAAAATTAAGAGATTTAGTGTAATGTCCTTGATGTGAGGAGGAAGAAATAGGAGTAGCATTCTAATAATATAATTGGCATCGCTATGAATTTCTCTTACGCGCATATACATGAGTTTATGTTATAGTAATTACTTCATTTACATTATGCAGATCACAATGATATCTCCGATGTTACAAGCCAACAGGTAGCTCGTTTTATACATTTTCAGGTTCATTGGTTATACAGATGAATGCATACAATATCTAGCCATTTTTTTACCCTATGTTGTTGGCTGTTGCAGGCTACCAAATGGAGAGAACAGAAGGCACTACACGACCTTAAATCTCTTTTTCCAAAAGAGGTAAGCACATGCTGACATCACTCTTGTTTTGTCTTTCGTAATATTTTCATGCAAGAGTTATCCTCCCAACCTTCTAATCAATACCATATTGTAGGTTCTTGATGTTATTATGTCCAGCACGAATGATATGGGGCCTTTGAGTCTAGAAAATTTCCGAAATAATCTTTCTGCTTCTTGGAGAGTTGTTGGGTCAAAGACTTCAAACGCAACAAATCAGGTTAGGATTACTGATGTGCTTCTGCTTGAAAGTTTGATTTCCCCTCGAAAGGCATTATTGTCCTATTGCTACTGATTTTAATGTTTTTTAATTAAAGCTAAACAACCCAGAAACACATCTTAGACAAGAAGTTCAAAAGGAGAAGGAAGGAAGATCTTCAGGTTGTATCAGATACTATCAGTTAATATCCCCATGCTTTATTTTATTTCACCTTCTCATTAATTTTTCATTAATGCAGCAGGTCTTCCTCAGTGGACTGATAGTCCCGTAAGGCTAGCCAGAAGGGTGAGCATCATTCTTGGATATTTATCTTTTTTCACTTAGCATTTTAGATACCATTAACTAAATTGTGTTTGTAGTGAAGAGTAATCTCCCATACCTTTTAATGTGGTGCTTGTGATAGTGACAAAAAAAAAGCCTTATCATATACAAATAGCATGATATAATAATATAATTCTTAGCAGACCCCAACCTACAATAATAGTAGCCTTGATGAAGTATGATGTTCTGTTTGAAAATATTGTTTGACCTGTGGAGCGAGTTTTCTTTATTTAGAGAACAACAAATATATTCTTAAAGTAAACTTTGTTTTGCTCTTTTTTAATATCTTCTGCAGCAATTAATAGAGAAAAGGATGGCAAAGCGGGCTGCTGAGTTGGTACAACAGGATGATGAAGTTATTGTAAAACTTGAAGATTTAGCTATTGAACGTTCAAAATCAGTTGATTCAGCAGTTCTAGGTAAATACAACCTTTGGAGGAAAGAAAATGAAAATGAGAATGCTGATTCTACCGTTCGGTTGATGCGAGATCAGATCATTATGGCTAGGGTATACTTGAGTATTGCAAAGATGAAGAACAAGCTTGAATTGTACCAAGAACTGCAAACACGGCTTAAAGAGAGTCAGCGTGCTTTAGGTGAGGCAACTTCTGATGCTGACCTACACCAGAGGTATGCACAATTTTCTGAAGTGTATAAATATCTGCATCTGTTTGTATATACACTAACCTAATTAATTATCTTTAGTGAACATGAAAAAATCAAAGCAATGGGCCAAGTTCTTTCTAAGGCGAAAGATCAATTGTATGACTGCAAGTTGGTTATTGGGAAAGTAAGGGCAATGCTACAAACTGCTGATGAGCAGGTTAGAGGCTTGAAGAAACAAAGCACATTCCTTAGTCAGTTGGCTGCCAAGACCATACCAAATGGAATTCACTGCTTATCGATGCGCCTTACCATAGATTACTACCTCCTCCCACCTGAAAAGAGAAAGTTCCCTATGACTGAGAATTTGGTTAATCCCAGTCTTTATCATTATGCCCTATTCTCAGACAATGTTTTGGCTGCATCTGTTGTTGTCAACTCAACTGTTGTGAATGCAAAGGTAAAGAACTAACAGTCTTTTATGATACATGTGCTGGTGTGTATGTTTTTCAAGCACATTCCTTTTTAAAGATGATGGATTTGAGCTTGGATCCACGTGTTTTGCTTGCAACAGTCCATCTATTATTTGATAAATAATATTATTAAACCCAACCCTTCATTCATTAACTTATGTTGTTGTCTTTGACATTGCAGGATCCTTCAAAGCATGTGTTTCACCTTGTTACTGATAAACTAAATTTTGGAGCCATGAATATGTGGTTTTTATTGAATCCTCCTGGTAAAGCTACAATCTATGTTGAAAATGTTGATGAATTTAAGTGGTTGAACTCATCTTACTGCCCAGTCTTGAGACAGCTTGAATCTGCGACAATGAAAGAGTATTATTTCAAGGCAGGCCACCCATCCACTACTGGTGCTTCTAATCTCAAATACAGAAATCCAAAGTATCTTTCAATGCTCAACCACCTGAGGTTCTATCTTCCACAAGTTTATCCGAAATTGGATAAGATTCTTTTTCTTGATGATGACATTGTTGTCCAGAAGGATTTGACTGGATTATGGAATGTGGATCTTCATGGAAAAGTTAACGGTGCAGTTGAAACATGTGGTGAGAGCTTTCACCGATTCGACAAATATCTTAACTTTTCAAATCCACATATTGCAAAAAACTTTGATCCCAATGCTTGTGGTTGGGCATACGGAATGAACATGTTTGATTTGAAGGTGTGGAAAAAGAAGGACATTACTGGCATATATCACAGGTGGCAGAATTTGGTGAGCAAATTGAACATAACATCGGTTTACATCATGTTTCTATTCTCGGAATTGGCTTCTCTGCAACCACATAGTACTGCACGCAACCACGAATCTCGAATCTCGGCTGTTGGATATCAGATGACTCTTATTCCAATTTCTATTTTAAAACTAATTTGAAGAAGTCAGAATGTGAGCCGTCTGATCCTCAGCCAACAGTCTAGATTCCTTGGTTGCAGGACTGTGTGCTTGCCCTAACTGTAGGGAATCATGCTCTGTCTATCTTCACATAAATAGACAAAACAAATGTGATCTTTCACTGACCATTTTTTTTCATGTTTGATTTCAGAATGAAGACAGGGTACTATGGAAATTAGGGACATTACCTCCAGGGCTAATGACATTCTATGGATTAACACATCCGCTAAATAAATCATGGCATGTACTCGGTTTGGGTTACAGTCCAAGTATAGATCGTACGGAGATTGAGAATGCAGCAGTTGTACACTATAATGGTAATATGAAGCCATGGTTAGAGATAGCAATGACAAAGTATCGTCCTTACTGGACCAAATATGTCAAGTATAACCATCCTTATCTTAGGAACTGTAAGCTAAGTGAATGGTCTGGATAA
Protein sequence

>MS.gene27610.t1

MDALENHNDISDVTSQQATKWREQKALHDLKSLFPKEVLDVIMSSTNDMGPLSLENFRNNLSASWRVVGSKTSNATNQLNNPETHLRQEVQKEKEGRSSGLPQWTDSPVRLARRQLIEKRMAKRAAELVQQDDEVIVKLEDLAIERSKSVDSAVLGKYNLWRKENENENADSTVRLMRDQIIMARVYLSIAKMKNKLELYQELQTRLKESQRALGEATSDADLHQSEHEKIKAMGQVLSKAKDQLYDCKLVIGKVRAMLQTADEQVRGLKKQSTFLSQLAAKTIPNGIHCLSMRLTIDYYLLPPEKRKFPMTENLVNPSLYHYALFSDNVLAASVVVNSTVVNAKDPSKHVFHLVTDKLNFGAMNMWFLLNPPGKATIYVENVDEFKWLNSSYCPVLRQLESATMKEYYFKAGHPSTTGASNLKYRNPKYLSMLNHLRFYLPQVYPKLDKILFLDDDIVVQKDLTGLWNVDLHGKVNGAVETCGESFHRFDKYLNFSNPHIAKNFDPNACGWAYGMNMFDLKVWKKKDITGIYHRWQNLNEDRVLWKLGTLPPGLMTFYGLTHPLNKSWHVLGLGYSPSIDRTEIENAAVVHYNGNMKPWLEIAMTKYRPYWTKYVKYNHPYLRNCKLSEWSG